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Hoelzel H, Lee S, Amsharov KY, Jux N, Harano K, Nakamura E, Lungerich D. Time-resolved imaging and analysis of the electron beam-induced formation of an open-cage metallo-azafullerene. Nat Chem 2023; 15:1444-1451. [PMID: 37386284 DOI: 10.1038/s41557-023-01261-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Accepted: 05/26/2023] [Indexed: 07/01/2023]
Abstract
The visualization of single-molecule reactions provides crucial insights into chemical processes, and the ability to do so has grown with the advances in high-resolution transmission electron microscopy. There is currently a limited mechanistic understanding of chemical reactions under the electron beam. However, such reactions may enable synthetic methodologies that cannot be accessed by traditional organic chemistry methods. Here we demonstrate the synthetic use of the electron beam, by in-depth single-molecule, atomic-resolution, time-resolved transmission electron microscopy studies, in inducing the formation of a doubly holed fullerene-porphyrin cage structure from a well-defined benzoporphyrin precursor deposited on graphene. Through real-time imaging, we analyse the hybrid's ability to host up to two Pb atoms, and subsequently probe the dynamics of the Pb-Pb binding motif in this exotic metallo-organic cage structure. Through simulation, we conclude that the secondary electrons, which accumulate in the periphery of the irradiated area, can also initiate chemical reactions. Consequently, designing advanced carbon nanostructures by electron-beam lithography will depend on the understanding and limitations of molecular radiation chemistry.
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Affiliation(s)
- Helen Hoelzel
- Department of Chemistry and Pharmacy, Friedrich-Alexander-University Erlangen-Nuernberg (FAU), Erlangen, Germany
- Department of Chemistry, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
| | - Sol Lee
- Center for NanoMedicine, Institute for Basic Science (IBS), Seodaemun-gu, Seoul, South Korea
| | | | - Norbert Jux
- Department of Chemistry and Pharmacy, Friedrich-Alexander-University Erlangen-Nuernberg (FAU), Erlangen, Germany
| | - Koji Harano
- Department of Chemistry, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
- Center for Basic Research on Materials, National Institute for Materials Science, Tsukuba, Japan
| | - Eiichi Nakamura
- Department of Chemistry, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
| | - Dominik Lungerich
- Department of Chemistry, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
- Center for NanoMedicine, Institute for Basic Science (IBS), Seodaemun-gu, Seoul, South Korea.
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, South Korea.
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2
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Yang XQ, Duan JJ, Su J, Peng X, Yi ZY, Li RN, Lu J, Wang SF, Chen T, Wang D. Aromatic Ring Fusion to Benzoporphyrin via γ- ortho Cyclodehydrogenation on a Ag(111) Surface. ACS NANO 2022; 16:13092-13100. [PMID: 35913404 DOI: 10.1021/acsnano.2c05819] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Aromatic ring fusion to porphyrins and their derivatives represents an attractive route to tune the molecular conjugation and thus expand their functionalities. Here, we report the expansion of the aromatic π-system of palladium tetraphenyltetrabenzoporphyrins (Pd-TPTBP) via surface-assisted γ-ortho cyclodehydrogenation on Ag(111). The chemical transformation of Pd-TPTBP into different products at an elevated temperature of 600 K was revealed at the single-molecule level using bond-resolved scanning tunneling microscopy with a CO-functionalized tip. We captured a series of γ-ortho cyclodehydrogenation products, wherein the maximum extent to which the reaction can progress is associated with 7-fold C-C formation to afford nearly planar γ-ortho fused porphyrins with 66 conjugated π-electrons. In addition, a small number of molecules undergo C-C bond dissociation of meso-phenyl at elevated temperature, producing fully planar γ-ortho fused products lacking one or two phenyl moieties. Scanning tunneling spectroscopy measurements and DFT calculations suggest the electronic gap of the γ-ortho fused porphyrin decreases compared to that of the precursor. The HOMO and LUMO of the planar γ-ortho fused products are localized on the partially fused benzo moieties and the meso-position, respectively.
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Affiliation(s)
- Xue-Qing Yang
- Ministry of Education Key Laboratory for the Synthesis and Application of Organic Functional Molecules, College of Chemistry and Chemical Engineering, Hubei University, Wuhan 430062, People's Republic of China
- Key Laboratory of Molecular Nanostructure and Nanotechnology and Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, People's Republic of China
| | - Jun-Jie Duan
- Key Laboratory of Molecular Nanostructure and Nanotechnology and Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Jie Su
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Xinnan Peng
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Zhen-Yu Yi
- Key Laboratory of Molecular Nanostructure and Nanotechnology and Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Ruo-Ning Li
- Key Laboratory of Molecular Nanostructure and Nanotechnology and Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, People's Republic of China
| | - Jiong Lu
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
- Institute for Functional Intelligent Materials, National University of Singapore, Singapore 117544, Singapore
| | - Sheng-Fu Wang
- Ministry of Education Key Laboratory for the Synthesis and Application of Organic Functional Molecules, College of Chemistry and Chemical Engineering, Hubei University, Wuhan 430062, People's Republic of China
| | - Ting Chen
- Key Laboratory of Molecular Nanostructure and Nanotechnology and Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, People's Republic of China
| | - Dong Wang
- Key Laboratory of Molecular Nanostructure and Nanotechnology and Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
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Borissov A, Maurya YK, Moshniaha L, Wong WS, Żyła-Karwowska M, Stępień M. Recent Advances in Heterocyclic Nanographenes and Other Polycyclic Heteroaromatic Compounds. Chem Rev 2022; 122:565-788. [PMID: 34850633 PMCID: PMC8759089 DOI: 10.1021/acs.chemrev.1c00449] [Citation(s) in RCA: 247] [Impact Index Per Article: 82.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Indexed: 12/21/2022]
Abstract
This review surveys recent progress in the chemistry of polycyclic heteroaromatic molecules with a focus on structural diversity and synthetic methodology. The article covers literature published during the period of 2016-2020, providing an update to our first review of this topic (Chem. Rev. 2017, 117 (4), 3479-3716).
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Affiliation(s)
| | | | | | | | | | - Marcin Stępień
- Wydział Chemii, Uniwersytet
Wrocławski, ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
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Zhang Q, Xie XM, Wei SY, Zhu ZZ, Zheng LS, Xie SY. The Synthesis of Conical Carbon. SMALL METHODS 2021; 5:e2001086. [PMID: 34927822 DOI: 10.1002/smtd.202001086] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 12/30/2020] [Indexed: 06/14/2023]
Abstract
Conical carbon, specifically multi-walled carbon nanocones (CNCs) and single-walled carboncones, is a new class of sp2 -hybridized carbon allotrope, in addition to fullerene, carbon nanotubes (CNTs), and graphene. Characterized by a conical and delocalized aromatic configuration, the conical carbon structure is considered the intermediate structure between planar graphene and open-cage fullerene. CNCs can be stiffer than CNTs and exhibit intriguing physical and chemical properties owing to their unique hollow conical structure, which make these materials promising for application as field emission sources and scanning probes. The research on conical carbon structures is in its nascent stage, mainly because of the limitations in the synthesis and purification of conical carbons. This review summarizes the significant progress in the synthesis of CNCs and carboncones. Particularly, the synthetic methods, which can be divided into traditional physical-chemical synthesis methods for multi-walled CNCs and emerging bottom-up organic synthesis methods for single-walled carboncones, are comprehensively discussed. In addition, the advantages and disadvantages of the various synthetic methods as well as the possible formation and growth mechanisms of CNCs and carboncones are discussed. Finally, some outlooks on the potential solutions to the synthesis of single-walled carboncones with uniform apex angles are presented.
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Affiliation(s)
- Qianyan Zhang
- State Key Lab for Physical Chemistry of Solid Surfaces, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials), Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian, 361005, P. R. China
| | - Xiao-Ming Xie
- State Key Lab for Physical Chemistry of Solid Surfaces, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials), Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian, 361005, P. R. China
| | - Shi-Yao Wei
- State Key Lab for Physical Chemistry of Solid Surfaces, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials), Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian, 361005, P. R. China
| | - Zheng-Zhong Zhu
- State Key Lab for Physical Chemistry of Solid Surfaces, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials), Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian, 361005, P. R. China
| | - Lan-Sun Zheng
- State Key Lab for Physical Chemistry of Solid Surfaces, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials), Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian, 361005, P. R. China
| | - Su-Yuan Xie
- State Key Lab for Physical Chemistry of Solid Surfaces, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials), Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian, 361005, P. R. China
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Lungerich D, Hitzenberger JF, Ruppel M, Döpper T, Witt M, Ivanović-Burmazović I, Görling A, Jux N, Drewello T. Gas-Phase Transformation of Fluorinated Benzoporphyrins to Porphyrin-Embedded Conical Nanocarbons. Chemistry 2020; 26:12180-12187. [PMID: 32578918 PMCID: PMC7540561 DOI: 10.1002/chem.202002638] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Indexed: 01/07/2023]
Abstract
Geodesic nitrogen-containing graphene fragments are interesting candidates for various material applications, but the available synthetic protocols, which need to overcome intrinsic strain energy during the formation of the bowl-shaped skeletons, are often incompatible with heteroatom-embedded structures. Through this mass spectrometry-based gas-phase study, we show by means of collision-induced dissociation experiments and supported by density functional theory calculations, the first evidence for the formation of a porphyrin-embedded conical nanocarbon. The influences of metalation and functionalization of the used tetrabenzoporphyrins have been investigated, which revealed different cyclization efficiencies, different ionization possibilities, and a variation of the dissociation pathway. Our results suggest a stepwise process for HF elimination from the fjord region, which supports a selective pathway towards bent nitrogen-containing graphene fragments.
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Affiliation(s)
- Dominik Lungerich
- Department of Chemistry and Pharmacy, & Interdisciplinary Center for Molecular Materials (ICMM), Organic Chemistry II, Friedrich-Alexander-University Erlangen-Nuernberg, Nikolaus-Fiebiger-Str. 10, 91058, Erlangen, Germany.,Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, 03722, Republic of Korea.,Graduate Program of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, 03722, Republic of Korea
| | - Jakob Felix Hitzenberger
- Department of Chemistry and Pharmacy, Physical Chemistry I, Friedrich-Alexander-University Erlangen-Nuernberg, Egerlandstrasse 3, 91058, Erlangen, Germany
| | - Michael Ruppel
- Department of Chemistry and Pharmacy, & Interdisciplinary Center for Molecular Materials (ICMM), Organic Chemistry II, Friedrich-Alexander-University Erlangen-Nuernberg, Nikolaus-Fiebiger-Str. 10, 91058, Erlangen, Germany
| | - Tibor Döpper
- Department of Chemistry and Pharmacy, Theoretical Chemistry, Friedrich-Alexander-University Erlangen-Nuernberg, Egerlandstrasse 3, 91058, Erlangen, Germany
| | - Matthias Witt
- Bruker Daltonics GmbH, Fahrenheitstrasse 4, 28359, Bremen, Germany
| | - Ivana Ivanović-Burmazović
- Department of Chemistry and Pharmacy, Bioinorganic Chemistry, Friedrich-Alexander-University Erlangen-Nuernberg, Egerlandstrasse 1, 91058, Erlangen, Germany
| | - Andreas Görling
- Department of Chemistry and Pharmacy, Theoretical Chemistry, Friedrich-Alexander-University Erlangen-Nuernberg, Egerlandstrasse 3, 91058, Erlangen, Germany
| | - Norbert Jux
- Department of Chemistry and Pharmacy, & Interdisciplinary Center for Molecular Materials (ICMM), Organic Chemistry II, Friedrich-Alexander-University Erlangen-Nuernberg, Nikolaus-Fiebiger-Str. 10, 91058, Erlangen, Germany
| | - Thomas Drewello
- Department of Chemistry and Pharmacy, Physical Chemistry I, Friedrich-Alexander-University Erlangen-Nuernberg, Egerlandstrasse 3, 91058, Erlangen, Germany
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