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Dong Y, Zhang Z, Hashikawa Y, Meng H, Bai F, Itami K, Chaolumen. A Double Twisted Nanographene with a Contorted Pyrene Core. Angew Chem Int Ed Engl 2024; 63:e202406927. [PMID: 39011764 DOI: 10.1002/anie.202406927] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Indexed: 07/17/2024]
Abstract
The mature synthetic methodologies enable us to rationally design and produce chiral nanographenes (NGs), most of which consist of multiple helical motifs. However, inherent chirality originating from twisted geometry has just emerged to be employed in chiral NGs. Herein, we report a red-emissive chiral NG constituted of orthogonally arranged two-fold twisted π-skeletons at a contorted pyrene core which contributes to optical transitions of S0→S1 and vice versa. The thus-obtained NG exhibited a robustness on its redox properties through 2e- uptake/release. The chemical oxidation generated stable radical cation whose absorption covers near-infrared I and II regions. Overall, the contorted pyrene core governs electronic nature of the chiral NG. The twist operation on NGs would be, therefore, a design strategy to alter conventional chirality induction on NGs.
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Affiliation(s)
- Yanping Dong
- College of Chemistry and Chemical Engineering, Inner Mongolia University, Hohhot, 010021, China
| | - Zhiyu Zhang
- College of Chemistry and Chemical Engineering, Inner Mongolia University, Hohhot, 010021, China
| | - Yoshifumi Hashikawa
- Institute for Chemical Research, Kyoto University, Uji, Kyoto, 611-0011, Japan
| | - He Meng
- College of Chemistry and Chemical Engineering, Inner Mongolia University, Hohhot, 010021, China
| | - Fenghua Bai
- College of Chemistry and Chemical Engineering, Inner Mongolia University, Hohhot, 010021, China
| | - Kenichiro Itami
- Cluster for Pioneering Research, RIKEN, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan
| | - Chaolumen
- College of Chemistry and Chemical Engineering, Inner Mongolia University, Hohhot, 010021, China
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2
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Kingsbury CJ, Senge MO. Quantifying near-symmetric molecular distortion using symmetry-coordinate structural decomposition. Chem Sci 2024:d4sc01670j. [PMID: 39129773 PMCID: PMC11310747 DOI: 10.1039/d4sc01670j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Accepted: 08/01/2024] [Indexed: 08/13/2024] Open
Abstract
We imagine molecules to be perfect, but rigidified units can be designed to bend from their ideal shape, discarding their symmetric elements as they progress through vibrations and larger, more permanent distortions. The shape of molecules is either simulated or measured by crystallography and strongly affects chemical properties but, beyond an image or tabulation of atom-to-atom distances, little is often discussed of the accessed conformation. We have simplified the process of shape quantification across multiple molecular types with a new web-accessible program - SCSD - through which a molecular subunit possessing near-symmetry can be dissected into symmetry coordinates with ease. This parameterization allows a common set of numbers for comparing and understanding molecular shape, and is a simple method for database analysis; this program is available at https://www.kingsbury.id.au/scsd.
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Affiliation(s)
- Christopher J Kingsbury
- School of Chemistry, Chair of Organic Chemistry, Trinity College Dublin, The University of Dublin, Trinity Biomedical Sciences Institute 152-160 Pearse Street Dublin D02R590 Ireland
| | - Mathias O Senge
- School of Chemistry, Chair of Organic Chemistry, Trinity College Dublin, The University of Dublin, Trinity Biomedical Sciences Institute 152-160 Pearse Street Dublin D02R590 Ireland
- Institute for Advanced Study (TUM-IAS), Technical University of Munich Lichtenberg-Str. 2a 85748 Garching Germany
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3
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Agrawal AR, Shiouki I, Deree Y, Bogoslavsky B, Gidron O. Controlling helicene's pitch by molecular tethering. Org Biomol Chem 2024; 22:1365-1368. [PMID: 38258458 DOI: 10.1039/d3ob02075d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
We applied post-cyclization annulation to introduce a series of tethered S-shaped double [4]helicenes in which the intramolecular tether imposes a specific helical handedness. Introducing a tether and then shortening the tether length incrementally increase the pitch angle of [4]helicene, thus enabling a quantitative study of the effects of helicene's pitch on its electronic and (chiro)optical properties.
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Affiliation(s)
- Abhijeet R Agrawal
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, Israel.
| | - Israa Shiouki
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, Israel.
| | - Yinon Deree
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, Israel.
| | - Benny Bogoslavsky
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, Israel.
| | - Ori Gidron
- Institute of Chemistry, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, Israel.
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Ghasemabadi PG, Tabasi ZA, Salari P, Zhao Y, Bodwell GJ. Long-range Through-space Charge Transfer in a pH-responsive Mixed Cyclophane of Pyridine and Teropyrene. Chemistry 2023; 29:e202302404. [PMID: 37682562 DOI: 10.1002/chem.202302404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 09/08/2023] [Indexed: 09/09/2023]
Abstract
A large, strained (SE=44.2 kcal/mol) and conformationally flexible mixed cyclophane of pyridine and teropyrene was synthesized using two intramolecular Wurtz coupling reactions and an unprecedented Scholl reaction between the unreactive 2 positions of the pyrene systems in a triply bridged pyrenophane. Protonation of the pyridine unit results in a greatly enhanced preference for nesting in the cavity of the highly bent teropyrene system (θcalc =162.6°) and emergence of a charge transfer absorption band (λmax =592 nm) due to a long range (5.0-5.5 Å), through-space intramolecular transition between the teropyrene and pyridinium units, which does not exist in the neutral cyclophane.
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Affiliation(s)
- Parisa Ghods Ghasemabadi
- Chemistry Department, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's, NL A1C 5S7, Canada
| | - Zahra A Tabasi
- Chemistry Department, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's, NL A1C 5S7, Canada
| | - Parinaz Salari
- Chemistry Department, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's, NL A1C 5S7, Canada
| | - Yuming Zhao
- Chemistry Department, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's, NL A1C 5S7, Canada
| | - Graham J Bodwell
- Chemistry Department, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's, NL A1C 5S7, Canada
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Zhang X, Mackinnon MR, Bodwell GJ, Ito S. Synthesis of a π-Extended Azacorannulenophane Enabled by Strain-Induced 1,3-Dipolar Cycloaddition. Angew Chem Int Ed Engl 2022; 61:e202116585. [PMID: 35148448 DOI: 10.1002/anie.202116585] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2021] [Indexed: 11/09/2022]
Abstract
The first example of a cyclophane bearing a nitrogen-containing buckybowl was synthesized via sequential 1,3-dipolar cycloaddition and palladium-catalyzed intramolecular cyclization. The key to the successful synthesis is the strain-induced 1,3-dipolar cycloaddition of a polycyclic aromatic azomethine ylide to the K-region of [7](2,7)pyrenophane. The resulting π-extended azacorannulenophane exhibits intriguing structural and physical properties, including unique variation of bowl depth, extraordinarily high-field chemical shifts in its 1 H NMR spectrum, a decreased HOMO-LUMO gap, and a red shift in the absorption/emission spectrum, when compared to those of the parent azacorannulene. These characteristics are derived from both the π-extension to the polycyclic aromatic system in the cyclophane structure and the increased curvature enforced by the seven-carbon aliphatic chain.
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Affiliation(s)
- Xinjiang Zhang
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371, Singapore
| | - Marc R Mackinnon
- Department of Chemistry, Memorial University of Newfoundland, St. John's, NL A1B 3X7, Canada
| | - Graham J Bodwell
- Department of Chemistry, Memorial University of Newfoundland, St. John's, NL A1B 3X7, Canada
| | - Shingo Ito
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371, Singapore
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Zhang X, Mackinnon MR, Bodwell GJ, Ito S. Synthesis of a π‐Extended Azacorannulenophane Enabled by Strain‐Induced 1,3‐Dipolar Cycloaddition. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202116585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Xinjiang Zhang
- Nanyang Technological University School of Physical and Mathematical sciences 21 Nanyang Link 637371 Singapore SINGAPORE
| | - Marc R. Mackinnon
- Memorial University of Newfoundland Chemistry A1B 3X7 St. John's CANADA
| | - Graham J. Bodwell
- Memorial University of Newfoundland Chemistry A1B 3X7 St. John’s CANADA
| | - Shingo Ito
- Nanyang Technological University School of Physical and Mathematical Sciences Division of Chemistry and Biological Chemistry 21 Nanyang Link 637371 Singapore SINGAPORE
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Ghods Ghasemabadi P, Zhao Y, Bodwell GJ. A Highly Congested Dioxapyrenophane from an Attempted Synthesis of the Highly‐Strained 1,1,6,6‐Tetramethyl[6](2,11)teropyrenophane. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Parisa Ghods Ghasemabadi
- Chemistry Department Memorial University of Newfoundland 283 Prince Philip Drive St. John's NL Canada A1B 3X7
| | - Yuming Zhao
- Chemistry Department Memorial University of Newfoundland 283 Prince Philip Drive St. John's NL Canada A1B 3X7
| | - Graham J. Bodwell
- Chemistry Department Memorial University of Newfoundland 283 Prince Philip Drive St. John's NL Canada A1B 3X7
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Unikela KS, Tabasi ZA, Dawe LN, Zhao Y, Bodwell GJ. "Shadow" Synthesis, Structure, and Electronic Properties of [2.2](1,6)(1,8)Pyrenophane-1-monoene. J Org Chem 2021; 86:4405-4412. [PMID: 33656886 DOI: 10.1021/acs.joc.0c02579] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
An unexpected side product of a McMurry reaction was found to be a new [2.2]pyrenophane consisting of two pyrene units with different substitution patterns as well as different types and degrees of distortion from planarity. The new pyrenophane exhibits both monomer and intramolecular excimer fluorescence. Natural bond orbital (NBO) analysis revealed that there is an intramolecular charge-transfer interaction from the more distorted pyrene system to the less distorted one. The origin of the new pyrenophane was traced back to an impurity that was present a full five steps prior to the McMurry reaction from which it was isolated. The pathway to the pyrenophane shadowed that of the main synthetic route.
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Affiliation(s)
- Kiran Sagar Unikela
- Department of Chemistry, Memorial University of Newfoundland, 283 Prince Philip Drive, St. John's, NL Canada, A1B 3X7
| | - Zahra A Tabasi
- Department of Chemistry, Memorial University of Newfoundland, 283 Prince Philip Drive, St. John's, NL Canada, A1B 3X7
| | - Louise N Dawe
- Department of Chemistry and Biochemistry, Wilfrid Laurier University, 75 University Avenue West, Waterloo, ON Canada, N2L 3C5
| | - Yuming Zhao
- Department of Chemistry, Memorial University of Newfoundland, 283 Prince Philip Drive, St. John's, NL Canada, A1B 3X7
| | - Graham J Bodwell
- Department of Chemistry, Memorial University of Newfoundland, 283 Prince Philip Drive, St. John's, NL Canada, A1B 3X7
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