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van Willigen BG, van der Hout-van der Jagt MB, Bovendeerd PHM, Huberts W, van de Vosse FN. A Multiscale Mathematical Model for the Fetal Blood Circulation of the Second Half of Pregnancy. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2024:e3877. [PMID: 39440701 DOI: 10.1002/cnm.3877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Revised: 08/14/2024] [Accepted: 09/28/2024] [Indexed: 10/25/2024]
Abstract
Doppler ultrasound is a commonly used method to assess hemodynamics of the fetal cardiovascular system and to monitor the well-being of the fetus. Indices based on the velocity profile are often used for diagnosis. However, precisely linking these indices to specific underlying physiology factors is challenging. Several influences, including wave reflections, fetal growth, vessel stiffness, and resistance distal to the vessel, contribute to these indices. Understanding these data is essential for making informed clinical decisions. Mathematical models can be used to investigate the relation between velocity profiles and physiological properties. This study presents a mathematical model designed to simulate velocity wave propagation throughout the fetal cardiovascular system, facilitating the assessment of factors influencing velocity-based indices. The model combines a one-fiber model of the heart with a 1D wave propagation model describing the larger vessels of the circulatory system and a lumped parameter model for the microcirculation. Fetal growth from 20 to 40 weeks of gestational age is incorporated by adjusting cardiac and circulatory parameter settings according to scaling laws. The model's results, including cardiac function, cardiac output distribution, and volume distribution, show a good agreement with literature studies for a growing healthy fetus from 20 to 40 weeks. In addition, Doppler indices are simulated in various vessels and agree with literature as well. In conclusion, this study introduces a novel closed-loop 0D-1D mathematical model that has been verified against literature studies. This model offers a valuable platform for analyzing factors influencing velocity-based indices in the fetal cardiovascular system.
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Affiliation(s)
- Bettine G van Willigen
- Cardiovascular Biomechanics, Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - M Beatrijs van der Hout-van der Jagt
- Cardiovascular Biomechanics, Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
- Obstetrics and Gynaecology, Máxima Medical Centre, Veldhoven, The Netherlands
- Signal Processing Systems, Electrical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - Peter H M Bovendeerd
- Cardiovascular Biomechanics, Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - Wouter Huberts
- Cardiovascular Biomechanics, Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, The Netherlands
| | - Frans N van de Vosse
- Cardiovascular Biomechanics, Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
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2
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Naghavi E, Wang H, Fan L, Choy JS, Kassab G, Baek S, Lee LC. Rapid estimation of left ventricular contractility with a physics-informed neural network inverse modeling approach. Artif Intell Med 2024; 157:102995. [PMID: 39442244 DOI: 10.1016/j.artmed.2024.102995] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Revised: 09/16/2024] [Accepted: 09/29/2024] [Indexed: 10/25/2024]
Abstract
Physics-based computer models based on numerical solutions of the governing equations generally cannot make rapid predictions, which in turn limits their applications in the clinic. To address this issue, we developed a physics-informed neural network (PINN) model that encodes the physics of a closed-loop blood circulation system embedding a left ventricle (LV). The PINN model is trained to satisfy a system of ordinary differential equations (ODEs) associated with a lumped parameter description of the circulatory system. The model predictions have a maximum error of less than 5% when compared to those obtained by solving the ODEs numerically. An inverse modeling approach using the PINN model is also developed to rapidly estimate model parameters (in ∼ 3 min) from single-beat LV pressure and volume waveforms. Using synthetic LV pressure and volume waveforms generated by the PINN model with different model parameter values, we show that the inverse modeling approach can recover the corresponding ground truth values for LV contractility indexed by the end-systolic elastance Ees with a 1% error, which suggests that this parameter is unique. The estimated Ees is about 58% to 284% higher for the data associated with dobutamine compared to those without, which implies that this approach can be used to estimate LV contractility using single-beat measurements. The PINN inverse modeling can potentially be used in the clinic to simultaneously estimate LV contractility and other physiological parameters from single-beat measurements.
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Affiliation(s)
- Ehsan Naghavi
- Department of Mechanical Engineering, Michigan State University, East Lansing, MI, United States of America
| | - Haifeng Wang
- Department of Mechanical Engineering, Michigan State University, East Lansing, MI, United States of America
| | - Lei Fan
- Joint Department of Biomedical Engineering, Marquette University and Medical College of Wisconsin, Milwaukee, WI, United States of America
| | - Jenny S Choy
- California Medical Innovations Institute, San Diego, CA, United States of America
| | - Ghassan Kassab
- California Medical Innovations Institute, San Diego, CA, United States of America
| | - Seungik Baek
- Department of Mechanical Engineering, Michigan State University, East Lansing, MI, United States of America
| | - Lik-Chuan Lee
- Department of Mechanical Engineering, Michigan State University, East Lansing, MI, United States of America.
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3
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Zhang X, Li Z, Zhang Z, Wang T, Liang F. In silico data-based comparison of the accuracy and error source of various methods for noninvasively estimating central aortic blood pressure. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2024; 257:108450. [PMID: 39369587 DOI: 10.1016/j.cmpb.2024.108450] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Revised: 09/13/2024] [Accepted: 09/29/2024] [Indexed: 10/08/2024]
Abstract
BACKGROUND AND OBJECTIVES The higher clinical significance of central aortic blood pressure (CABP) compared to peripheral blood pressures has been extensively demonstrated. Accordingly, many methods for noninvasively estimating CABP have been proposed. However, there still lacks a systematic comparison of existing methods, especially in terms of how they differ in the ability to tolerate individual differences or measurement errors. The present study was designed to address this gap. METHODS A large-scale 'virtual subject' dataset (n = 600) was created using a computational model of the cardiovascular system, and applied to examine several classical CABP estimation methods, including the direct method, generalized transfer function (GTF) method, n-point moving average (NPMA) method, second systolic pressure of periphery (SBP2) method, physical model-based wave analysis (MBWA) method, and suprasystolic cuff-based waveform reconstruction (SCWR) method. The errors of CABP estimation were analyzed and compared among methods with respect to the magnitude/distribution, correlations with physiological/hemodynamic factors, and sensitivities to noninvasive measurement errors. RESULTS The errors of CABP estimation exhibited evident inter-method differences in terms of the mean and standard deviation (SD). Relatively, the estimation errors of the methods adopting pre-trained algorithms (i.e., the GTF and SCWR methods) were overall smaller and less sensitive to variations in physiological/hemodynamic conditions and random errors in noninvasive measurement of brachial arterial blood pressure (used for calibrating peripheral pulse wave). The performances of all the methods worsened following the introduction of random errors to peripheral pulse wave (used for deriving CABP), as characterized by the enlarged SD and/or increased mean of the estimation errors. Notably, the GTF and SCWR methods did not exhibit a better capability of tolerating pulse wave errors in comparison with other methods. CONCLUSIONS Classical noninvasive methods for estimating CABP were found to differ considerably in both the accuracy and error source, which provided theoretical evidence for understanding the specific advantages and disadvantages of each method. Knowledge about the method-specific error source and sensitivities of errors to different physiological/hemodynamic factors may contribute as theoretical references for interpreting clinical observations and exploring factors underlying large estimation errors, or provide guidance for optimizing existing methods or developing new methods.
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Affiliation(s)
- Xujie Zhang
- Department of Engineering Mechanics, School of Ocean and Civil Engineering, Shanghai Jiao Tong University, Shanghai, China
| | - Zhaojun Li
- Department of Ultrasound, Shanghai General Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China
| | - Zhi Zhang
- Department of Cardiology, Shanghai General Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China
| | - Tianqi Wang
- School of Gongli Hospital Medical Technology, University of Shanghai for Science and Technology, Shanghai, China; School of Mechanical Engineering, University of Shanghai for science and Technology, Shanghai, China
| | - Fuyou Liang
- Department of Engineering Mechanics, School of Ocean and Civil Engineering, Shanghai Jiao Tong University, Shanghai, China; World-Class Research Center "Digital Biodesign and Personalized Healthcare", Sechenov First Moscow State Medical University, Moscow, 19991, Russia.
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4
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Spelman TA, Onah IS, MacTaggart D, Stewart PS. Elastic jump propagation across a blood vessel junction. ROYAL SOCIETY OPEN SCIENCE 2024; 11:232000. [PMID: 39021781 PMCID: PMC11252672 DOI: 10.1098/rsos.232000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Accepted: 04/29/2024] [Indexed: 07/20/2024]
Abstract
The theory of small-amplitude waves propagating across a blood vessel junction has been well established with linear analysis. In this study, we consider the propagation of large-amplitude, nonlinear waves (i.e. shocks and rarefactions) through a junction from a parent vessel into two (identical) daughter vessels using a combination of three approaches: numerical computations using a Godunov method with patching across the junction, analysis of a nonlinear Riemann problem in the neighbourhood of the junction and an analytical theory which extends the linear analysis to the following order in amplitude. A unified picture emerges: an abrupt (prescribed) increase in pressure at the inlet to the parent vessel generates a propagating shock wave along the parent vessel which interacts with the junction. For modest driving, this shock wave divides into propagating shock waves along the two daughter vessels and reflects a rarefaction wave back towards the inlet. However, for larger driving the reflected rarefaction wave becomes transcritical, generating an additional shock wave. Just beyond criticality this new shock wave has zero speed, pinned to the junction, but for further increases in driving this additional shock divides into two new propagating shock waves in the daughter vessels.
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Affiliation(s)
- Tamsin A. Spelman
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Ifeanyi S. Onah
- School of Mathematics and Statistics, University of Glasgow, University Place, Glasgow G12 8SQ, UK
| | - David MacTaggart
- School of Mathematics and Statistics, University of Glasgow, University Place, Glasgow G12 8SQ, UK
| | - Peter S. Stewart
- School of Mathematics and Statistics, University of Glasgow, University Place, Glasgow G12 8SQ, UK
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Colombo C, Siviglia A, Toro EF, Bia D, Zócalo Y, Müller LO. Tube law parametrization using in vitro data for one-dimensional blood flow in arteries and veins: TUBE LAW PARAMETRIZATION IN ARTERIES AND VEINS. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2024; 40:e3803. [PMID: 38363555 DOI: 10.1002/cnm.3803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2023] [Revised: 11/03/2023] [Accepted: 01/07/2024] [Indexed: 02/17/2024]
Abstract
The deformability of blood vessels in one-dimensional blood flow models is typically described through a pressure-area relation, known as the tube law. The most used tube laws take into account the elastic and viscous components of the tension of the vessel wall. Accurately parametrizing the tube laws is vital for replicating pressure and flow wave propagation phenomena. Here, we present a novel mathematical-property-preserving approach for the estimation of the parameters of the elastic and viscoelastic tube laws. Our goal was to estimate the parameters by using ovine and human in vitro data, while constraining them to meet prescribed mathematical properties. Results show that both elastic and viscoelastic tube laws accurately describe experimental pressure-area data concerning both quantitative and qualitative aspects. Additionally, the viscoelastic tube law can provide a qualitative explanation for the observed hysteresis cycles. The two models were evaluated using two approaches: (i) allowing all parameters to freely vary within their respective ranges and (ii) fixing some of the parameters. The former approach was found to be the most suitable for reproducing pressure-area curves.
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Affiliation(s)
- Chiara Colombo
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Trento, Italy
| | - Annunziato Siviglia
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Trento, Italy
| | - Eleuterio F Toro
- Laboratory of Applied Mathematics, DICAM, University of Trento, Trento, Italy
| | - Daniel Bia
- Department of Physiology, Faculty of Medicine, University of the Republic, Montevideo, Uruguay
| | - Yanina Zócalo
- Department of Physiology, Faculty of Medicine, University of the Republic, Montevideo, Uruguay
| | - Lucas O Müller
- Department of Mathematics, University of Trento, Trento, Italy
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6
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Korte J, Klopp ES, Berg P. Multi-Dimensional Modeling of Cerebral Hemodynamics: A Systematic Review. Bioengineering (Basel) 2024; 11:72. [PMID: 38247949 PMCID: PMC10813503 DOI: 10.3390/bioengineering11010072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Revised: 12/23/2023] [Accepted: 01/06/2024] [Indexed: 01/23/2024] Open
Abstract
The Circle of Willis (CoW) describes the arterial system in the human brain enabling the neurovascular blood supply. Neurovascular diseases like intracranial aneurysms (IAs) can occur within the CoW and carry the risk of rupture, which can lead to subarachnoid hemorrhage. The assessment of hemodynamic information in these pathologies is crucial for their understanding regarding detection, diagnosis and treatment. Multi-dimensional in silico approaches exist to evaluate these hemodynamics based on patient-specific input data. The approaches comprise low-scale (zero-dimensional, one-dimensional) and high-scale (three-dimensional) models as well as multi-scale coupled models. The input data can be derived from medical imaging, numerical models, literature-based assumptions or from measurements within healthy subjects. Thus, the most realistic description of neurovascular hemodynamics is still controversial. Within this systematic review, first, the models of the three scales (0D, 1D, 3D) and second, the multi-scale models, which are coupled versions of the three scales, were discussed. Current best practices in describing neurovascular hemodynamics most realistically and their clinical applicablility were elucidated. The performance of 3D simulation entails high computational expenses, which could be reduced by analyzing solely the region of interest in detail. Medical imaging to establish patient-specific boundary conditions is usually rare, and thus, lower dimensional models provide a realistic mimicking of the surrounding hemodynamics. Multi-scale coupling, however, is computationally expensive as well, especially when taking all dimensions into account. In conclusion, the 0D-1D-3D multi-scale approach provides the most realistic outcome; nevertheless, it is least applicable. A 1D-3D multi-scale model can be considered regarding a beneficial trade-off between realistic results and applicable performance.
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Affiliation(s)
- Jana Korte
- Research Campus STIMULATE, University of Magdeburg, 39106 Magdeburg, Germany
- Department of Fluid Dynamics and Technical Flows, University of Magdeburg, 39106 Magdeburg, Germany
| | - Ehlar Sophie Klopp
- Research Campus STIMULATE, University of Magdeburg, 39106 Magdeburg, Germany
- Department of Medical Engineering, University of Magdeburg, 39106 Magdeburg, Germany
| | - Philipp Berg
- Research Campus STIMULATE, University of Magdeburg, 39106 Magdeburg, Germany
- Department of Medical Engineering, University of Magdeburg, 39106 Magdeburg, Germany
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7
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Murillo J, García-Navarro P. Numerical coupling of 0D and 1D models in networks of vessels including transonic flow conditions. Application to short-term transient and stationary hemodynamic simulation of postural changes. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2023; 39:e3751. [PMID: 38018384 DOI: 10.1002/cnm.3751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 04/27/2023] [Accepted: 06/25/2023] [Indexed: 11/30/2023]
Abstract
When modeling complex fluid networks using one-dimensional (1D) approaches, boundary conditions can be imposed using zero-dimensional (0D) models. An application case is the modeling of the entire human circulation using closed-loop models. These models can be considered as a tool to investigate short-term transient and stationary hemodynamic responses to postural changes. The first shortcoming of existing 1D modeling methods in simulating these sudden maneuvers is their inability to deal with rapid variations in flow conditions, as they are limited to the subsonic case. On the other hand, numerical modeling of 0D models representing microvascular beds, venous valves or heart chambers is also currently modeled assuming subsonic flow conditions in 1D connecting vessels, failing when transonic and supersonic flow conditions appear. Therefore, if numerical simulation of sudden maneuvers is a goal in closed-loop models, it is necessary to reformulate the current methodologies used when coupling 0D and 1D models, allowing the correct handling of flow evolution for both subsonic and transonic conditions. This work focuses on the extension of the general methodology for the Junction Riemann Problem (JRP) when coupling 0D and 1D models. As an example of application, the short-term transient response to head-up tilt (HUT) from supine to upright position of a closed-loop model is shown, demonstrating the potential, capability and necessity of the presented numerical models when dealing with sudden maneuvers.
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Affiliation(s)
- Javier Murillo
- Fluid Dynamic Technologies - I3A, University of Zaragoza, Zaragoza, Spain
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8
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Celant M, Toro EF, Bertaglia G, Cozzio S, Caleffi V, Valiani A, Blanco PJ, Müller LO. Modeling essential hypertension with a closed-loop mathematical model for the entire human circulation. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2023; 39:e3748. [PMID: 37408358 DOI: 10.1002/cnm.3748] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 06/06/2023] [Accepted: 06/11/2023] [Indexed: 07/07/2023]
Abstract
Arterial hypertension, defined as an increase in systemic arterial pressure, is a major risk factor for the development of diseases affecting the cardiovascular system. Every year, 9.4 million deaths worldwide are caused by complications arising from hypertension. Despite well-established approaches to diagnosis and treatment, fewer than half of all hypertensive patients have adequately controlled blood pressure. In this scenario, computational models of hypertension can be a practical approach for better quantifying the role played by different components of the cardiovascular system in the determination of this condition. In the present work we adopt a global closed-loop multi-scale mathematical model for the entire human circulation to reproduce a hypertensive scenario. In particular, we modify the model to reproduce alterations in the cardiovascular system that are cause and/or consequence of the hypertensive state. The adaptation does not only affect large systemic arteries and the heart but also the microcirculation, the pulmonary circulation and the venous system. Model outputs for the hypertensive scenario are validated through assessment of computational results against current knowledge on the impact of hypertension on the cardiovascular system.
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Affiliation(s)
- Morena Celant
- Department of Mathematics, University of Trento, Trento, Italy
| | - Eleuterio F Toro
- Laboratory of Applied Mathematics, DICAM, University of Trento, Trento, Italy
| | - Giulia Bertaglia
- Department of Environmental and Prevention Sciences, University of Ferrara, Ferrara, Italy
| | - Susanna Cozzio
- U.O. di Medicina Interna, Ospedale di Rovereto, Azienda Sanitaria per i Servizi Provinciali di Trento, Trento, Italy
| | - Valerio Caleffi
- Department of Engineering, University of Ferrara, Ferrara, Italy
| | | | - Pablo J Blanco
- National Laboratory for Scientific Computing, Petròpolis, Brazil
| | - Lucas O Müller
- Department of Mathematics, University of Trento, Trento, Italy
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9
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Kopylova V, Boronovskiy S, Nartsissov Y. Approaches to vascular network, blood flow, and metabolite distribution modeling in brain tissue. Biophys Rev 2023; 15:1335-1350. [PMID: 37974995 PMCID: PMC10643724 DOI: 10.1007/s12551-023-01106-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 07/24/2023] [Indexed: 11/19/2023] Open
Abstract
The cardiovascular system plays a key role in the transport of nutrients, ensuring a continuous supply of all cells of the body with the metabolites necessary for life. The blood supply to the brain is carried out by the large arteries located on its surface, which branch into smaller arterioles that penetrate the cerebral cortex and feed the capillary bed, thereby forming an extensive branching network. The formation of blood vessels is carried out via vasculogenesis and angiogenesis, which play an important role in both embryo and adult life. The review presents approaches to modeling various aspects of both the formation of vascular networks and the construction of the formed arterial tree. In addition, a brief description of models that allows one to study the blood flow in various parts of the circulatory system and the spatiotemporal metabolite distribution in brain tissues is given. Experimental study of these issues is not always possible due to both the complexity of the cardiovascular system and the mechanisms through which the perfusion of all body cells is carried out. In this regard, mathematical models are a good tool for studying hemodynamics and can be used in clinical practice to diagnose vascular diseases and assess the need for treatment.
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Affiliation(s)
- Veronika Kopylova
- Institute of Cytochemistry and Molecular Pharmacology, Moscow, 115404 Russia
| | | | - Yaroslav Nartsissov
- Institute of Cytochemistry and Molecular Pharmacology, Moscow, 115404 Russia
- Biomedical Research Group, BiDiPharma GmbH, Siek, 22962 Germany
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10
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Steinman DA, Gounis MJ, Levitt MR. You're so vein, you probably think this model's about you: opportunities and challenges for computational fluid dynamics in cerebral venous disease. J Neurointerv Surg 2023; 15:621-622. [PMID: 37328188 DOI: 10.1136/jnis-2023-020652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/30/2023] [Indexed: 06/18/2023]
Affiliation(s)
- David A Steinman
- Mechanical & Industrial Engineering, University of Toronto, Toronto, Ontario, Canada
| | - Matthew J Gounis
- New England Center for Stroke Research, Department of Radiology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, USA
| | - Michael R Levitt
- Neurological Surgery, University of Washington School of Medicine, Seattle, Washington, USA
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11
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Müller LO, Watanabe SM, Toro EF, Feijóo RA, Blanco PJ. An anatomically detailed arterial-venous network model. Cerebral and coronary circulation. Front Physiol 2023; 14:1162391. [PMID: 37435309 PMCID: PMC10332167 DOI: 10.3389/fphys.2023.1162391] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Accepted: 05/22/2023] [Indexed: 07/13/2023] Open
Abstract
In recent years, several works have addressed the problem of modeling blood flow phenomena in veins, as a response to increasing interest in modeling pathological conditions occurring in the venous network and their connection with the rest of the circulatory system. In this context, one-dimensional models have proven to be extremely efficient in delivering predictions in agreement with in-vivo observations. Pursuing the increase of anatomical accuracy and its connection to physiological principles in haemodynamics simulations, the main aim of this work is to describe a novel closed-loop Anatomically-Detailed Arterial-Venous Network (ADAVN) model. An extremely refined description of the arterial network consisting of 2,185 arterial vessels is coupled to a novel venous network featuring high level of anatomical detail in cerebral and coronary vascular territories. The entire venous network comprises 189 venous vessels, 79 of which drain the brain and 14 are coronary veins. Fundamental physiological mechanisms accounting for the interaction of brain blood flow with the cerebro-spinal fluid and of the coronary circulation with the cardiac mechanics are considered. Several issues related to the coupling of arterial and venous vessels at the microcirculation level are discussed in detail. Numerical simulations are compared to patient records published in the literature to show the descriptive capabilities of the model. Furthermore, a local sensitivity analysis is performed, evidencing the high impact of the venous circulation on main cardiovascular variables.
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Affiliation(s)
- Lucas O. Müller
- Department of Mathematics, University of Trento, Trento, Italy
| | - Sansuke M. Watanabe
- Federal University of Agreste de Pernambuco, UFAPE, Garanhuns, Brazil
- National Institute of Science and Technology in Medicine Assisted by Scientific Computing, INCT-MACC, Petrópolis, Brazil
| | - Eleuterio F. Toro
- Laboratory of Applied Mathematics, Department of Civil, Environmental and Mechanical Engineering, University of Trento, Trento, Italy
| | - Raúl A. Feijóo
- National Institute of Science and Technology in Medicine Assisted by Scientific Computing, INCT-MACC, Petrópolis, Brazil
- National Laboratory for Scientific Computing, LNCC/MCTI, Petrópolis, Brazil
| | - Pablo J. Blanco
- National Institute of Science and Technology in Medicine Assisted by Scientific Computing, INCT-MACC, Petrópolis, Brazil
- National Laboratory for Scientific Computing, LNCC/MCTI, Petrópolis, Brazil
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12
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Coccarelli A, Nelson MD. Modeling Reactive Hyperemia to Better Understand and Assess Microvascular Function: A Review of Techniques. Ann Biomed Eng 2023; 51:479-492. [PMID: 36709231 PMCID: PMC9928923 DOI: 10.1007/s10439-022-03134-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Accepted: 12/25/2022] [Indexed: 01/30/2023]
Abstract
Reactive hyperemia is a well-established technique for the non-invasive evaluation of the peripheral microcirculatory function, measured as the magnitude of limb re-perfusion after a brief period of ischemia. Despite widespread adoption by researchers and clinicians alike, many uncertainties remain surrounding interpretation, compounded by patient-specific confounding factors (such as blood pressure or the metabolic rate of the ischemic limb). Mathematical modeling can accelerate our understanding of the physiology underlying the reactive hyperemia response and guide in the estimation of quantities which are difficult to measure experimentally. In this work, we aim to provide a comprehensive guide for mathematical modeling techniques that can be used for describing the key phenomena involved in the reactive hyperemia response, alongside their limitations and advantages. The reported methodologies can be used for investigating specific reactive hyperemia aspects alone, or can be combined into a computational framework to be used in (pre-)clinical settings.
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Affiliation(s)
- Alberto Coccarelli
- Zienkiewicz Centre for Computational Engineering, Faculty of Science and Engineering, Swansea University, Swansea, UK.
| | - Michael D Nelson
- Department of Kinesiology, University of Texas at Arlington, Arlington, TX, USA
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13
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Schwarz EL, Pegolotti L, Pfaller MR, Marsden AL. Beyond CFD: Emerging methodologies for predictive simulation in cardiovascular health and disease. BIOPHYSICS REVIEWS 2023; 4:011301. [PMID: 36686891 PMCID: PMC9846834 DOI: 10.1063/5.0109400] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 12/12/2022] [Indexed: 01/15/2023]
Abstract
Physics-based computational models of the cardiovascular system are increasingly used to simulate hemodynamics, tissue mechanics, and physiology in evolving healthy and diseased states. While predictive models using computational fluid dynamics (CFD) originated primarily for use in surgical planning, their application now extends well beyond this purpose. In this review, we describe an increasingly wide range of modeling applications aimed at uncovering fundamental mechanisms of disease progression and development, performing model-guided design, and generating testable hypotheses to drive targeted experiments. Increasingly, models are incorporating multiple physical processes spanning a wide range of time and length scales in the heart and vasculature. With these expanded capabilities, clinical adoption of patient-specific modeling in congenital and acquired cardiovascular disease is also increasing, impacting clinical care and treatment decisions in complex congenital heart disease, coronary artery disease, vascular surgery, pulmonary artery disease, and medical device design. In support of these efforts, we discuss recent advances in modeling methodology, which are most impactful when driven by clinical needs. We describe pivotal recent developments in image processing, fluid-structure interaction, modeling under uncertainty, and reduced order modeling to enable simulations in clinically relevant timeframes. In all these areas, we argue that traditional CFD alone is insufficient to tackle increasingly complex clinical and biological problems across scales and systems. Rather, CFD should be coupled with appropriate multiscale biological, physical, and physiological models needed to produce comprehensive, impactful models of mechanobiological systems and complex clinical scenarios. With this perspective, we finally outline open problems and future challenges in the field.
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Affiliation(s)
- Erica L. Schwarz
- Departments of Pediatrics and Bioengineering, Stanford University, Stanford, California 94305, USA
| | - Luca Pegolotti
- Departments of Pediatrics and Bioengineering, Stanford University, Stanford, California 94305, USA
| | - Martin R. Pfaller
- Departments of Pediatrics and Bioengineering, Stanford University, Stanford, California 94305, USA
| | - Alison L. Marsden
- Departments of Pediatrics and Bioengineering, Stanford University, Stanford, California 94305, USA
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14
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Pfaller MR, Pham J, Verma A, Pegolotti L, Wilson NM, Parker DW, Yang W, Marsden AL. Automated generation of 0D and 1D reduced-order models of patient-specific blood flow. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2022; 38:e3639. [PMID: 35875875 PMCID: PMC9561079 DOI: 10.1002/cnm.3639] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 05/24/2022] [Accepted: 07/19/2022] [Indexed: 06/13/2023]
Abstract
Three-dimensional (3D) cardiovascular fluid dynamics simulations typically require hours to days of computing time on a high-performance computing cluster. One-dimensional (1D) and lumped-parameter zero-dimensional (0D) models show great promise for accurately predicting blood bulk flow and pressure waveforms with only a fraction of the cost. They can also accelerate uncertainty quantification, optimization, and design parameterization studies. Despite several prior studies generating 1D and 0D models and comparing them to 3D solutions, these were typically limited to either 1D or 0D and a singular category of vascular anatomies. This work proposes a fully automated and openly available framework to generate and simulate 1D and 0D models from 3D patient-specific geometries, automatically detecting vessel junctions and stenosis segments. Our only input is the 3D geometry; we do not use any prior knowledge from 3D simulations. All computational tools presented in this work are implemented in the open-source software platform SimVascular. We demonstrate the reduced-order approximation quality against rigid-wall 3D solutions in a comprehensive comparison with N = 72 publicly available models from various anatomies, vessel types, and disease conditions. Relative average approximation errors of flows and pressures typically ranged from 1% to 10% for both 1D and 0D models, measured at the outlets of terminal vessel branches. In general, 0D model errors were only slightly higher than 1D model errors despite requiring only a third of the 1D runtime. Automatically generated ROMs can significantly speed up model development and shift the computational load from high-performance machines to personal computers.
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Affiliation(s)
- Martin R. Pfaller
- Pediatric Cardiology, Stanford University, CA, USA
- Institute for Computational and Mathematical Engineering, Stanford University, CA, USA
- Cardiovascular Institute, Stanford University, CA, USA
| | - Jonathan Pham
- Mechanical Engineering, Stanford University, CA, USA
| | | | - Luca Pegolotti
- Pediatric Cardiology, Stanford University, CA, USA
- Institute for Computational and Mathematical Engineering, Stanford University, CA, USA
| | | | | | | | - Alison L. Marsden
- Pediatric Cardiology, Stanford University, CA, USA
- Institute for Computational and Mathematical Engineering, Stanford University, CA, USA
- Cardiovascular Institute, Stanford University, CA, USA
- Bioengineering, Stanford University, CA, USA
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15
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Anselmino M, Scarsoglio S, Ridolfi L, De Ferrari GM, Saglietto A. Insights from computational modeling on the potential hemodynamic effects of sinus rhythm versus atrial fibrillation. Front Cardiovasc Med 2022; 9:844275. [PMID: 36187015 PMCID: PMC9515395 DOI: 10.3389/fcvm.2022.844275] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Accepted: 08/22/2022] [Indexed: 11/13/2022] Open
Abstract
Atrial fibrillation (AF) is the most common clinical tachyarrhythmia, posing a significant burden to patients, physicians, and healthcare systems worldwide. With the advent of more effective rhythm control strategies, such as AF catheter ablation, an early rhythm control strategy is progressively demonstrating its superiority not only in symptoms control but also in prognostic terms, over a standard strategy (rate control, with rhythm control reserved only to patients with refractory symptoms). This review summarizes the different impacts exerted by AF on heart mechanics and systemic circulation, as well as on cerebral and coronary vascular beds, providing computational modeling-based hemodynamic insights in favor of pursuing sinus rhythm maintenance in AF patients.
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Affiliation(s)
- Matteo Anselmino
- Division of Cardiology, Department of Medical Sciences, “Città della Salute e della Scienza di Torino” Hospital, University of Turin, Turin, Italy
- *Correspondence: Matteo Anselmino,
| | - Stefania Scarsoglio
- Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Turin, Italy
| | - Luca Ridolfi
- Department of Environmental, Land, and Infrastructure Engineering, Politecnico di Torino, Turin, Italy
| | - Gaetano Maria De Ferrari
- Division of Cardiology, Department of Medical Sciences, “Città della Salute e della Scienza di Torino” Hospital, University of Turin, Turin, Italy
| | - Andrea Saglietto
- Division of Cardiology, Department of Medical Sciences, “Città della Salute e della Scienza di Torino” Hospital, University of Turin, Turin, Italy
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16
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Caforio F, Augustin CM, Alastruey J, Gsell MAF, Plank G. A coupling strategy for a first 3D-1D model of the cardiovascular system to study the effects of pulse wave propagation on cardiac function. COMPUTATIONAL MECHANICS 2022; 70:703-722. [PMID: 36124206 PMCID: PMC9477941 DOI: 10.1007/s00466-022-02206-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Accepted: 06/16/2022] [Indexed: 06/15/2023]
Abstract
A key factor governing the mechanical performance of the heart is the bidirectional coupling with the vascular system, where alterations in vascular properties modulate the pulsatile load imposed on the heart. Current models of cardiac electromechanics (EM) use simplified 0D representations of the vascular system when coupling to anatomically accurate 3D EM models is considered. However, these ignore important effects related to pulse wave transmission. Accounting for these effects requires 1D models, but a 3D-1D coupling remains challenging. In this work, we propose a novel, stable strategy to couple a 3D cardiac EM model to a 1D model of blood flow in the largest systemic arteries. For the first time, a personalised coupled 3D-1D model of left ventricle and arterial system is built and used in numerical benchmarks to demonstrate robustness and accuracy of our scheme over a range of time steps. Validation of the coupled model is performed by investigating the coupled system's physiological response to variations in the arterial system affecting pulse wave propagation, comprising aortic stiffening, aortic stenosis or bifurcations causing wave reflections. Our first 3D-1D coupled model is shown to be efficient and robust, with negligible additional computational costs compared to 3D-0D models. We further demonstrate that the calibrated 3D-1D model produces simulated data that match with clinical data under baseline conditions, and that known physiological responses to alterations in vascular resistance and stiffness are correctly replicated. Thus, using our coupled 3D-1D model will be beneficial in modelling studies investigating wave propagation phenomena.
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Affiliation(s)
- Federica Caforio
- Institute of Mathematics and Scientific Computing, NAWI Graz, University of Graz, Graz, Austria
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
- BioTechMed-Graz, Graz, Austria
| | - Christoph M. Augustin
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
- BioTechMed-Graz, Graz, Austria
| | - Jordi Alastruey
- Department of Biomedical Engineering, Division of Imaging Sciences and Biomedical Engineering, King’s College London, King’s Health Partners, St. Thomas’ Hospital, London, SE1 7EH UK
| | - Matthias A. F. Gsell
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
- BioTechMed-Graz, Graz, Austria
| | - Gernot Plank
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
- BioTechMed-Graz, Graz, Austria
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17
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Chi Z, Beile L, Deyu L, Yubo F. Application of multiscale coupling models in the numerical study of circulation system. MEDICINE IN NOVEL TECHNOLOGY AND DEVICES 2022. [DOI: 10.1016/j.medntd.2022.100117] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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18
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Optimal control problem arising in mathematical modeling of cerebral vascular pathology embolization. Sci Rep 2022; 12:1302. [PMID: 35079058 PMCID: PMC8789901 DOI: 10.1038/s41598-022-05231-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 01/07/2022] [Indexed: 11/09/2022] Open
Abstract
Arteriovenous malformation (AVM) of the brain is a congenital vascular abnormality, in which the arterial and venous blood pools are intertwined and directly connected. This dangerous disease causes a high risk of intracranial hemorrhage and disrupts brain functioning. The preferred method of AVM treating is embolization, which is the endovascular filling of abnormal AVM vessels with a special embolic agent. Despite the fact that this method is widely used in neurosurgery, in some cases its use is accompanied by perioperative AVM vessels rupture. In this regard, the aim of this work is to study the optimal scenarios for multi-stage AVM embolization from the effectiveness and safety of the procedure point of view. Mathematically, the joint movement of blood and embolic agent in the AVM body is described on the basis of a one-dimensional two-phase filtration model, which takes into account the redistribution of blood to surrounding healthy vessels. For the numerical solution of the resulting integro-differential system of equations, a monotonic modification of the CABARET scheme is used. To find optimal embolization scenarios, the optimal control problem with phase constraints arising from medicine is formulated. A modified particle swarm optimization method is used to solve this problem numerically. This technique is used to obtain optimal embolization scenarios on the basis of real patients clinical data collected during neurosurgical operations.
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19
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Impact of Respiratory Fluctuation on Hemodynamics in Human Cardiovascular System: A 0-1D Multiscale Model. FLUIDS 2022. [DOI: 10.3390/fluids7010028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
To explore hemodynamic interaction between the human respiratory system (RS) and cardiovascular system (CVS), here we propose an integrated computational model to predict the CVS hemodynamics with consideration of the respiratory fluctuation (RF). A submodule of the intrathoracic pressure (ITP) adjustment is developed and incorporated in a 0-1D multiscale hemodynamic model of the CVS specified for infant, adolescent, and adult individuals. The model is verified to enable reasonable estimation of the blood pressure waveforms accounting for the RF-induced pressure fluctuations in comparison with clinical data. The results show that the negative ITP caused by respiration increases the blood flow rates in superior and inferior vena cavae; the deep breathing improves the venous return in adolescents but has less influence on infants. It is found that a marked reduction in ITP under pathological conditions can excessively increase the flow rates in cavae independent of the individual ages, which may cause the hemodynamic instability and hence increase the risk of heart failure. Our results indicate that the present 0-1D multiscale CVS model incorporated with the RF effect is capable of providing a useful and effective tool to explore the physiological and pathological mechanisms in association with cardiopulmonary interactions and their clinical applications.
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20
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Toro EF, Celant M, Zhang Q, Contarino C, Agarwal N, Linninger A, Müller LO. Cerebrospinal fluid dynamics coupled to the global circulation in holistic setting: Mathematical models, numerical methods and applications. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2022; 38:e3532. [PMID: 34569188 PMCID: PMC9285081 DOI: 10.1002/cnm.3532] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Accepted: 09/13/2021] [Indexed: 06/13/2023]
Abstract
This paper presents a mathematical model of the global, arterio-venous circulation in the entire human body, coupled to a refined description of the cerebrospinal fluid (CSF) dynamics in the craniospinal cavity. The present model represents a substantially revised version of the original Müller-Toro mathematical model. It includes one-dimensional (1D), non-linear systems of partial differential equations for 323 major blood vessels and 85 zero-dimensional, differential-algebraic systems for the remaining components. Highlights include the myogenic mechanism of cerebral blood regulation; refined vasculature for the inner ear, the brainstem and the cerebellum; and viscoelastic, rather than purely elastic, models for all blood vessels, arterial and venous. The derived 1D parabolic systems of partial differential equations for all major vessels are approximated by hyperbolic systems with stiff source terms following a relaxation approach. A major novelty of this paper is the coupling of the circulation, as described, to a refined description of the CSF dynamics in the craniospinal cavity, following Linninger et al. The numerical solution methodology employed to approximate the hyperbolic non-linear systems of partial differential equations with stiff source terms is based on the Arbitrary DERivative Riemann problem finite volume framework, supplemented with a well-balanced formulation, and a local time stepping procedure. The full model is validated through comparison of computational results against published data and bespoke MRI measurements. Then we present two medical applications: (i) transverse sinus stenoses and their relation to Idiopathic Intracranial Hypertension; and (ii) extra-cranial venous strictures and their impact in the inner ear circulation, and its implications for Ménière's disease.
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Affiliation(s)
| | - Morena Celant
- Department of MathematicsUniversity of TrentoTrentoItaly
| | - Qinghui Zhang
- Laboratory of Applied Mathematics, DICAMUniversity of TrentoTrentoItaly
| | | | | | - Andreas Linninger
- Department of BioengineeringUniversity of Illinois at ChicagoChicagoIllinoisUSA
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21
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Cardiovascular fetal-to-neonatal transition: an in silico model. Pediatr Res 2022; 91:116-128. [PMID: 33731808 DOI: 10.1038/s41390-021-01401-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 12/16/2020] [Accepted: 01/21/2021] [Indexed: 11/09/2022]
Abstract
BACKGROUND Previous models describing the fetal-to-neonatal transition often lack oxygen saturation levels, homeostatic control mechanisms, phasic hemodynamic signals, or describe the heart with a time-varying elastance model. METHODS We incorporated these elements in the adapted CircAdapt model with the one-fiber model for myocardial contraction, to simulate the hemodynamics of the healthy term human fetal circulation and its transition during the first 24 h after birth. The fetal-to-neonatal model was controlled by a time- and event-based script of changes occurring at birth, such as lung aeration and umbilical cord clamping. Model parameters were based on and validated with human and animal data. RESULTS The fetal circulation showed low pulmonary blood flow, right ventricular dominance, and inverted mitral and tricuspid flow velocity patterns, as well as high mean ductus venosus flow velocity. The neonatal circulation showed oxygen saturation levels to gradually increase to 98% in the first 15 min after birth as well as temporary left ventricular volume overload. CONCLUSIONS Hemodynamics of the term fetus and 24-h-old neonate, as well as the events occurring directly after birth and the transition during the first 24 h after birth, were realistically represented, allowing the model to be used for educational purposes and future research. IMPACT With the addition of oxygen saturation levels, homeostatic pressure-flow control mechanisms, and the one-fiber model for myocardial contraction, a new closed-loop cardiovascular model was constructed to give more insight into the healthy term human fetal circulation and its cardiovascular transition during the first 24 h after birth. Extensive validation confirmed that the hemodynamics of the term fetus and the fetal-to-neonatal transition were realistically represented with the model. This well-validated and versatile model can serve as an education as well as a research platform for in silico investigation of fetal-to-neonatal hemodynamic changes under a wide range of physiological and pathophysiological conditions.
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22
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An efficient, localised approach for the simulation of elastic blood vessels using the lattice Boltzmann method. Sci Rep 2021; 11:24260. [PMID: 34930939 PMCID: PMC8688478 DOI: 10.1038/s41598-021-03584-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Accepted: 12/01/2021] [Indexed: 11/08/2022] Open
Abstract
Many numerical studies of blood flow impose a rigid wall assumption due to the simplicity of its implementation compared to a full coupling with a solid mechanics model. In this paper, we present a localised method for incorporating the effects of elastic walls into blood flow simulations using the lattice Boltzmann method implemented by the open-source code HemeLB. We demonstrate that our approach is able to more accurately capture the flow behaviour expected in elastic walled vessels than ones with rigid walls. Furthermore, we show that this can be achieved with no loss of computational performance and remains strongly scalable on high performance computers. We finally illustrate that our approach captures the same trends in wall shear stress distribution as those observed in studies using a rigorous coupling between fluid dynamics and solid mechanics models to solve flow in personalised vascular geometries. These results demonstrate that our model can be used to efficiently and effectively represent flows in elastic blood vessels.
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23
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Rabineau J, Nonclercq A, Leiner T, van de Borne P, Migeotte PF, Haut B. Closed-Loop Multiscale Computational Model of Human Blood Circulation. Applications to Ballistocardiography. Front Physiol 2021; 12:734311. [PMID: 34955874 PMCID: PMC8697684 DOI: 10.3389/fphys.2021.734311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Accepted: 11/01/2021] [Indexed: 11/13/2022] Open
Abstract
Cardiac mechanical activity leads to periodic changes in the distribution of blood throughout the body, which causes micro-oscillations of the body's center of mass and can be measured by ballistocardiography (BCG). However, many of the BCG findings are based on parameters whose origins are poorly understood. Here, we generate simulated multidimensional BCG signals based on a more exhaustive and accurate computational model of blood circulation than previous attempts. This model consists in a closed loop 0D-1D multiscale representation of the human blood circulation. The 0D elements include the cardiac chambers, cardiac valves, arterioles, capillaries, venules, and veins, while the 1D elements include 55 systemic and 57 pulmonary arteries. The simulated multidimensional BCG signal is computed based on the distribution of blood in the different compartments and their anatomical position given by whole-body magnetic resonance angiography on a healthy young subject. We use this model to analyze the elements affecting the BCG signal on its different axes, allowing a better interpretation of clinical records. We also evaluate the impact of filtering and healthy aging on the BCG signal. The results offer a better view of the physiological meaning of BCG, as compared to previous models considering mainly the contribution of the aorta and focusing on longitudinal acceleration BCG. The shape of experimental BCG signals can be reproduced, and their amplitudes are in the range of experimental records. The contributions of the cardiac chambers and the pulmonary circulation are non-negligible, especially on the lateral and transversal components of the velocity BCG signal. The shapes and amplitudes of the BCG waveforms are changing with age, and we propose a scaling law to estimate the pulse wave velocity based on the time intervals between the peaks of the acceleration BCG signal. We also suggest new formulas to estimate the stroke volume and its changes based on the BCG signal expressed in terms of acceleration and kinetic energy.
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Affiliation(s)
- Jeremy Rabineau
- TIPs, Université Libre de Bruxelles, Brussels, Belgium
- LPHYS, Université Libre de Bruxelles, Brussels, Belgium
| | | | - Tim Leiner
- Department of Radiology, Utrecht University Medical Center, Utrecht, Netherlands
| | - Philippe van de Borne
- Department of Cardiology, Erasme Hospital, Université Libre de Bruxelles, Brussels, Belgium
| | | | - Benoit Haut
- TIPs, Université Libre de Bruxelles, Brussels, Belgium
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24
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Augustin CM, Gsell MA, Karabelas E, Willemen E, Prinzen FW, Lumens J, Vigmond EJ, Plank G. A computationally efficient physiologically comprehensive 3D-0D closed-loop model of the heart and circulation. COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING 2021; 386:114092. [PMID: 34630765 PMCID: PMC7611781 DOI: 10.1016/j.cma.2021.114092] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Computer models of cardiac electro-mechanics (EM) show promise as an effective means for the quantitative analysis of clinical data and, potentially, for predicting therapeutic responses. To realize such advanced applications methodological key challenges must be addressed. Enhanced computational efficiency and robustness is crucial to facilitate, within tractable time frames, model personalization, the simulation of prolonged observation periods under a broad range of conditions, and physiological completeness encompassing therapy-relevant mechanisms is needed to endow models with predictive capabilities beyond the mere replication of observations. Here, we introduce a universal feature-complete cardiac EM modeling framework that builds on a flexible method for coupling a 3D model of bi-ventricular EM to the physiologically comprehensive 0D CircAdapt model representing atrial mechanics and closed-loop circulation. A detailed mathematical description is given and efficiency, robustness, and accuracy of numerical scheme and solver implementation are evaluated. After parameterization and stabilization of the coupled 3D-0D model to a limit cycle under baseline conditions, the model's ability to replicate physiological behaviors is demonstrated, by simulating the transient response to alterations in loading conditions and contractility, as induced by experimental protocols used for assessing systolic and diastolic ventricular properties. Mechanistic completeness and computational efficiency of this novel model render advanced applications geared towards predicting acute outcomes of EM therapies feasible.
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Affiliation(s)
- Christoph M. Augustin
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
| | - Matthias A.F. Gsell
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
| | - Elias Karabelas
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
| | - Erik Willemen
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
| | - Frits W. Prinzen
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
| | - Joost Lumens
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
| | - Edward J. Vigmond
- IHU Liryc, Electrophysiology and Heart Modeling Institute, fondation Bordeaux Université, Pessac-Bordeaux, France
| | - Gernot Plank
- Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Graz, Austria
- BioTechMed-Graz, Graz, Austria
- Correspondence to: Gottfried Schatz Research Center: Division of Biophysics, Medical University of Graz, Neue Stiftingtalstrasse 6/IV, Graz 8010, Austria. (G. Plank)
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25
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Cury LFM, Maso Talou GD, Younes-Ibrahim M, Blanco PJ. Parallel generation of extensive vascular networks with application to an archetypal human kidney model. ROYAL SOCIETY OPEN SCIENCE 2021; 8:210973. [PMID: 34966553 PMCID: PMC8633801 DOI: 10.1098/rsos.210973] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Accepted: 10/28/2021] [Indexed: 05/25/2023]
Abstract
Given the relevance of the inextricable coupling between microcirculation and physiology, and the relation to organ function and disease progression, the construction of synthetic vascular networks for mathematical modelling and computer simulation is becoming an increasingly broad field of research. Building vascular networks that mimic in vivo morphometry is feasible through algorithms such as constrained constructive optimization (CCO) and variations. Nevertheless, these methods are limited by the maximum number of vessels to be generated due to the whole network update required at each vessel addition. In this work, we propose a CCO-based approach endowed with a domain decomposition strategy to concurrently create vascular networks. The performance of this approach is evaluated by analysing the agreement with the sequentially generated networks and studying the scalability when building vascular networks up to 200 000 vascular segments. Finally, we apply our method to vascularize a highly complex geometry corresponding to the cortex of a prototypical human kidney. The technique presented in this work enables the automatic generation of extensive vascular networks, removing the limitation from previous works. Thus, we can extend vascular networks (e.g. obtained from medical images) to pre-arteriolar level, yielding patient-specific whole-organ vascular models with an unprecedented level of detail.
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Affiliation(s)
- L. F. M. Cury
- National Laboratory for Scientific Computing, LNCC/MCTI, Petrópolis, Brazil
- National Institute of Science and Technology in Medicine Assisted by Scientific Computing, INCT-MACC, Petrópolis, Brazil
| | - G. D. Maso Talou
- Auckland Bioengineering Institute, The University of Auckland, Auckland, New Zealand
| | - M. Younes-Ibrahim
- Faculty of Medical Sciences, Rio de Janeiro State University, UERJ, Rio de Janeiro, Brazil
- National Institute of Science and Technology in Medicine Assisted by Scientific Computing, INCT-MACC, Petrópolis, Brazil
| | - P. J. Blanco
- National Laboratory for Scientific Computing, LNCC/MCTI, Petrópolis, Brazil
- National Institute of Science and Technology in Medicine Assisted by Scientific Computing, INCT-MACC, Petrópolis, Brazil
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26
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Staggered Semi-Implicit Hybrid Finite Volume/Finite Element Schemes for Turbulent and Non-Newtonian Flows. MATHEMATICS 2021. [DOI: 10.3390/math9222972] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
This paper presents a new family of semi-implicit hybrid finite volume/finite element schemes on edge-based staggered meshes for the numerical solution of the incompressible Reynolds-Averaged Navier–Stokes (RANS) equations in combination with the k−ε turbulence model. The rheology for calculating the laminar viscosity coefficient under consideration in this work is the one of a non-Newtonian Herschel–Bulkley (power-law) fluid with yield stress, which includes the Bingham fluid and classical Newtonian fluids as special cases. For the spatial discretization, we use edge-based staggered unstructured simplex meshes, as well as staggered non-uniform Cartesian grids. In order to get a simple and computationally efficient algorithm, we apply an operator splitting technique, where the hyperbolic convective terms of the RANS equations are discretized explicitly at the aid of a Godunov-type finite volume scheme, while the viscous parabolic terms, the elliptic pressure terms and the stiff algebraic source terms of the k−ε model are discretized implicitly. For the discretization of the elliptic pressure Poisson equation, we use classical conforming P1 and Q1 finite elements on triangles and rectangles, respectively. The implicit discretization of the viscous terms is mandatory for non-Newtonian fluids, since the apparent viscosity can tend to infinity for fluids with yield stress and certain power-law fluids. It is carried out with P1 finite elements on triangular simplex meshes and with finite volumes on rectangles. For Cartesian grids and more general orthogonal unstructured meshes, we can prove that our new scheme can preserve the positivity of k and ε. This is achieved via a special implicit discretization of the stiff algebraic relaxation source terms, using a suitable combination of the discrete evolution equations for the logarithms of k and ε. The method is applied to some classical academic benchmark problems for non-Newtonian and turbulent flows in two space dimensions, comparing the obtained numerical results with available exact or numerical reference solutions. In all cases, an excellent agreement is observed.
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27
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McCullough JWS, Coveney PV. High fidelity blood flow in a patient-specific arteriovenous fistula. Sci Rep 2021; 11:22301. [PMID: 34785678 PMCID: PMC8595446 DOI: 10.1038/s41598-021-01435-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 10/05/2021] [Indexed: 12/24/2022] Open
Abstract
An arteriovenous fistula, created by artificially connecting segments of a patient’s vasculature, is the preferred way to gain access to the bloodstream for kidney dialysis. The increasing power and availability of supercomputing infrastructure means that it is becoming more realistic to use simulations to help identify the best type and location of a fistula for a specific patient. We describe a 3D fistula model that uses the lattice Boltzmann method to simultaneously resolve blood flow in patient-specific arteries and veins. The simulations conducted here, comprising vasculatures of the whole forearm, demonstrate qualified validation against clinical data. Ongoing research to further encompass complex biophysics on realistic time scales will permit the use of human-scale physiological models for basic and clinical medicine.
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Affiliation(s)
- J W S McCullough
- Centre for Computational Science, Department of Chemistry, University College London, London, UK
| | - P V Coveney
- Centre for Computational Science, Department of Chemistry, University College London, London, UK. .,Informatics Institute, University of Amsterdam, Amsterdam, The Netherlands.
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28
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Ventre J, Politi MT, Fernández JM, Ghigo AR, Gaudric J, Wray SA, Lagaert JB, Armentano R, Capurro C, Fullana JM, Lagrée PY. Parameter estimation to study the immediate impact of aortic cross-clamping using reduced order models. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2021; 37:e3261. [PMID: 31617333 DOI: 10.1002/cnm.3261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2019] [Accepted: 09/01/2019] [Indexed: 06/10/2023]
Abstract
Aortic cross-clamping is a common strategy during vascular surgery, however, its instantaneous impact on hemodynamics is unknown. We, therefore, developed two numerical models to estimate the immediate impact of aortic clamping on the vascular properties. To assess the validity of the models, we recorded continuous invasive pressure signals during abdominal aneurysm repair surgery, immediately before and after clamping. The first model is a zero-dimensional (0D) three-element Windkessel model, which we coupled to a gradient-based parameter estimation algorithm to identify patient-specific parameters such as vascular resistance and compliance. We found a 10% increase in the total resistance and a 20% decrease in the total compliance after clamping. The second model is a nine-artery network corresponding to an average human body in which we solved the one-dimensional (1D) blood flow equations. With a similar parameter estimation method and using the results from the 0D model, we identified the resistance boundary conditions of the 1D network. Determining the patient-specific total resistance and the distribution of peripheral resistances through the parameter estimation process was sufficient for the 1D model to accurately reproduce the impact of clamping on the pressure waveform. Both models gave an accurate description of the pressure wave and had a high correlation (R2 > .95) with experimental blood pressure data.
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Affiliation(s)
- Jeanne Ventre
- Sorbonne Université, CNRS, Institut Jean Le Rond d'Alembert, Paris, France
| | - M Teresa Politi
- Universidad de Buenos Aires, Facultad de Medicina. Departamento de Ciencias Fisiológicas, Laboratorio de Biomembranas, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Instituto de Fisiologíay Biofísica "Bernardo Houssay", Buenos Aires, Argentina
| | - Juan M Fernández
- Universidad de Buenos Aires, Facultad de Medicina. Departamento de Ciencias Fisiológicas, Laboratorio de Biomembranas, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Instituto de Fisiologíay Biofísica "Bernardo Houssay", Buenos Aires, Argentina
| | - Arthur R Ghigo
- Institut de Mécanique des Fluides de Toulouse (IMFT), Université de Toulouse, CNRS, INPT, UPS
| | - Julien Gaudric
- Sorbonne Université, CNRS, Institut Jean Le Rond d'Alembert, Paris, France
- Service de Chirurgie Vasculaire, Hôpitaux Universitaires La Pitié-Salpêtriêre, Paris, France
| | - Sandra A Wray
- Instituto de Medicina Traslacional, Trasplante y Bioingeniería, Universidad Favaloro-CONICET, Buenos Aires, Argentina
| | | | - Ricardo Armentano
- Departamento de Ingeniería Biológica, Universidad de la República, Montevideo, Uruguay
| | - Claudia Capurro
- Universidad de Buenos Aires, Facultad de Medicina. Departamento de Ciencias Fisiológicas, Laboratorio de Biomembranas, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Instituto de Fisiologíay Biofísica "Bernardo Houssay", Buenos Aires, Argentina
| | - José Maria Fullana
- Sorbonne Université, CNRS, Institut Jean Le Rond d'Alembert, Paris, France
| | - Pierre-Yves Lagrée
- Sorbonne Université, CNRS, Institut Jean Le Rond d'Alembert, Paris, France
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Total Effective Vascular Compliance of a Global Mathematical Model for the Cardiovascular System. Symmetry (Basel) 2021. [DOI: 10.3390/sym13101858] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
In this work, we determined the total effective vascular compliance of a global closed-loop model for the cardiovascular system by performing an infusion test of 500 mL of blood in four minutes. Our mathematical model includes a network of arteries and veins where blood flow is described by means of a one-dimensional nonlinear hyperbolic PDE system and zero-dimensional models for other cardiovascular compartments. Some mathematical modifications were introduced to better capture the physiology of the infusion test: (1) a physiological distribution of vascular compliance and total blood volume was implemented, (2) a nonlinear representation of venous resistances and compliances was introduced, and (3) main regulatory mechanisms triggered by the infusion test where incorporated into the model. By means of presented in silico experiment, we show that effective total vascular compliance is the result of the interaction between the assigned constant physical vascular compliance and the capacity of the cardiovascular system to adapt to new situations via regulatory mechanisms.
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30
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Ventre J, Abou Taam S, Fullana JM, Lagrée PY. Distribution of Flow in an Arteriovenous Fistula Using Reduced-Order Models. J Biomech Eng 2021; 143:101010. [PMID: 34041533 DOI: 10.1115/1.4051282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Indexed: 11/08/2022]
Abstract
The creation of a communication between an artery and a vein (arteriovenous fistula or AVF), to speed up the blood purification during hemodialysis of patients with renal insufficiency, induces significant rheological and mechanical modifications of the vascular network. In this study, we investigated the impact of the creation of an AVF with a zero-dimensional network model of the vascular system of an upper limb and a one-dimensional model around the anastomosis. We compared the simulated distribution of flow rate in this vascular system with Doppler ultrasound measurements. We studied three configurations: before the creation of the AVF, after the creation of the AVF, and after a focal reduction due to a hyper flow rate. The zero-dimensional model predicted the bounds of the diameter of the superficial vein that respects the flow constraints, assuming a high capillary resistance. We indeed highlighted the importance of knowing the capillary resistance as it is a decisive parameter in the models. We also found that the model reproduced the Doppler measurements of flow rate in every configuration and predicted the distribution of flow in cases where the Doppler was not available. The one-dimensional model allowed studying the impact of a venous constriction on the flow distribution, and the capillary resistance was still a crucial parameter.
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Affiliation(s)
- Jeanne Ventre
- Department of Mechanical Engineering, Institut Jean Le Rond d'Alembert, UMR 7190, Sorbonne Université, CNRS, Paris 75005, France
| | - Salam Abou Taam
- Department of Thoracic and Vascular Surgery, Hopital Privé Claude Galien, Quincy-sous-Sénart 91480, France
| | - José Maria Fullana
- Department of Mechanical Engineering, Institut Jean Le Rond d'Alembert, UMR 7190, Sorbonne Université, CNRS, Paris 75005, France
| | - Pierre-Yves Lagrée
- Department of Mechanical Engineering, Institut Jean Le Rond d'Alembert, UMR 7190, Sorbonne Université, CNRS, Paris 75005, France
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31
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Li Z, Jiang W, Diao J, Chen C, Xu K, Fan H, Yan F. Segmentary strategy in modeling of cardiovascular system with blood supply to regional skin. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.08.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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32
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A Solution of the Junction Riemann Problem for 1D Hyperbolic Balance Laws in Networks including Supersonic Flow Conditions on Elastic Collapsible Tubes. Symmetry (Basel) 2021. [DOI: 10.3390/sym13091658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
The numerical modeling of one-dimensional (1D) domains joined by symmetric or asymmetric bifurcations or arbitrary junctions is still a challenge in the context of hyperbolic balance laws with application to flow in pipes, open channels or blood vessels, among others. The formulation of the Junction Riemann Problem (JRP) under subsonic conditions in 1D flow is clearly defined and solved by current methods, but they fail when sonic or supersonic conditions appear. Formulations coupling the 1D model for the vessels or pipes with other container-like formulations for junctions have been presented, requiring extra information such as assumed bulk mechanical properties and geometrical properties or the extension to more dimensions. To the best of our knowledge, in this work, the JRP is solved for the first time allowing solutions for all types of transitions and for any number of vessels, without requiring the definition of any extra information. The resulting JRP solver is theoretically well-founded, robust and simple, and returns the evolving state for the conserved variables in all vessels, allowing the use of any numerical method in the resolution of the inner cells used for the space-discretization of the vessels. The methodology of the proposed solver is presented in detail. The JRP solver is directly applicable if energy losses at the junctions are defined. Straightforward extension to other 1D hyperbolic flows can be performed.
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33
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Li P, Pan Q, Jiang S, Yan M, Yan J, Ning G. Development of Novel Fractal Method for Characterizing the Distribution of Blood Flow in Multi-Scale Vascular Tree. Front Physiol 2021; 12:711247. [PMID: 34393827 PMCID: PMC8358817 DOI: 10.3389/fphys.2021.711247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Accepted: 07/09/2021] [Indexed: 11/13/2022] Open
Abstract
Blood perfusion is an important index for the function of the cardiovascular system and it can be indicated by the blood flow distribution in the vascular tree. As the blood flow in a vascular tree varies in a large range of scales and fractal analysis owns the ability to describe multi-scale properties, it is reasonable to apply fractal analysis to depict the blood flow distribution. The objective of this study is to establish fractal methods for analyzing the blood flow distribution which can be applied to real vascular trees. For this purpose, the modified methods in fractal geometry were applied and a special strategy was raised to make sure that these methods are applicable to an arbitrary vascular tree. The validation of the proposed methods on real arterial trees verified the ability of the produced parameters (fractal dimension and multifractal spectrum) in distinguishing the blood flow distribution under different physiological states. Furthermore, the physiological significance of the fractal parameters was investigated in two situations. For the first situation, the vascular tree was set as a perfect binary tree and the blood flow distribution was adjusted by the split ratio. As the split ratio of the vascular tree decreases, the fractal dimension decreases and the multifractal spectrum expands. The results indicate that both fractal parameters can quantify the degree of blood flow heterogeneity. While for the second situation, artificial vascular trees with different structures were constructed and the hemodynamics in these vascular trees was simulated. The results suggest that both the vascular structure and the blood flow distribution affect the fractal parameters for blood flow. The fractal dimension declares the integrated information about the heterogeneity of vascular structure and blood flow distribution. In contrast, the multifractal spectrum identifies the heterogeneity features in blood flow distribution or vascular structure by its width and height. The results verified that the proposed methods are capable of depicting the multi-scale features of the blood flow distribution in the vascular tree and further are potential for investigating vascular physiology.
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Affiliation(s)
- Peilun Li
- Department of Biomedical Engineering, Zhejiang University, Hangzhou, China
| | - Qing Pan
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
| | - Sheng Jiang
- Department of Biomedical Engineering, Zhejiang University, Hangzhou, China
| | - Molei Yan
- Department of Intensive Care Medicine, Zhejiang Hospital, Hangzhou, China
| | - Jing Yan
- Department of Intensive Care Medicine, Zhejiang Hospital, Hangzhou, China
| | - Gangmin Ning
- Department of Biomedical Engineering, Zhejiang University, Hangzhou, China
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34
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Belousov YM, Krainov VP, Revenko SV. Hydrodynamic model of blood flow in major arteries pulsing in various modes. Med Biol Eng Comput 2021; 59:1785-1794. [PMID: 34302595 DOI: 10.1007/s11517-021-02413-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2020] [Accepted: 07/09/2021] [Indexed: 11/25/2022]
Abstract
Traditionally, the arteries in mammals are viewed as the tubes with elastic wall, whose elasticity could be slowly (during a minute) tuned to change its diameter thereby regulating regional blood supply. Recent findings showed that an artery is a much more sophisticated organ, which can change elasticity of vascular wall within a fraction of a second during a cardiac cycle due to activation of its smooth muscles manifested by generation of arterial action potentials. The rapid variations in elasticity of vascular wall resulted in three basic modes of arterial pulsing: passive, active, and intermediate. The latter is characterized by counteraction of dilation force of arterial pressure and the contractile one of smooth muscle in arterial wall, which can result in seemingly "rigid" artery of constant diameter. The prevalence of any of these forces results in active or passive pulsing modes. Existence of various pulsing modes raises the question of their effect on the main function of blood vessels, i.e., the transport of blood. The aim of this study is to assess the effect of various modes of arterial pulsing on hydraulic impedance of major arteries. The linearized Navier-Stokes equation was employed to develop a model of pulsatile flow of viscous incompressible fluid at small velocity via a conduit artery with the walls of variable or constant elasticity. An essential feature of the developed model is the shape of variable pressure drop applied to the ends of arterial segment, which simulates the real changes in arterial pressure during the heartbeat. Here, it is modeled by periodic (systolic) positive bell-shaped impulses with maxima corresponding to systolic arterial pressure, while the minimal plateau level refers to diastolic arterial pressure. The model assesses the changes in arterial hydraulic impedance during a cardiac cycle relatively to the stable level corresponding to constant blood flow driven by persistent pressure drop. Within intermediate variety of pulsing modes between the active and passive ones, the approximation of rigid arterial segment with infinite elasticity of arterial wall showed that hydraulic impedance in rigid artery is not constant due to inertial properties of the flowing blood. In passive pulsing mode characterized with constant elasticity of arterial wall, the diameter of artery changes in parallel with systolic pressure applied to the ends of arterial segment. At this, the overall change of hydraulic resistance is negative. In active pulsing mode, elasticity of arterial wall varies at different phase shifts relative to arterial pressure due to periodic contractions and relaxation of the smooth muscles in arterial wall. An important feature of active mode is possibility to decrease the hydraulic impedance during the front of arterial pressure. Various experimental modes of artery pulsing can be mathematically simulated. The passive and active modes of pulsing as well as a broad variety of intermediate pulsing modes with various phase shifts between arterial pressure and its diameter result in potency of the arteries to tune its performance in order to meet the regional circulatory requirements. The model showed that active arterial pulsing can diminish the arterial hydraulic impedance and contribute to the work needed for circulation thereby helping the pumping action of the heart.
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Affiliation(s)
- Yu M Belousov
- Moscow Institute of Physics and Technology, Moscow Region, 141700, Dolgoprudny, Russian Federation
| | - V P Krainov
- Moscow Institute of Physics and Technology, Moscow Region, 141700, Dolgoprudny, Russian Federation.
| | - S V Revenko
- Research Institute of Experimental Cardiology, 121552, Moscow, Russian Federation
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35
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Heltai L, Caiazzo A, Müller LO. Multiscale Coupling of One-dimensional Vascular Models and Elastic Tissues. Ann Biomed Eng 2021; 49:3243-3254. [PMID: 34282493 PMCID: PMC8671283 DOI: 10.1007/s10439-021-02804-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Accepted: 05/28/2021] [Indexed: 11/19/2022]
Abstract
We present a computational multiscale model for the efficient simulation of vascularized tissues, composed of an elastic three-dimensional matrix and a vascular network. The effect of blood vessel pressure on the elastic tissue is surrogated via hyper-singular forcing terms in the elasticity equations, which depend on the fluid pressure. In turn, the blood flow in vessels is treated as a one-dimensional network. Intravascular pressure and velocity are simulated using a high-order finite volume scheme, while the elasticity equations for the tissue are solved using a finite element method. This work addresses the feasibility and the potential of the proposed coupled multiscale model. In particular, we assess whether the multiscale model is able to reproduce the tissue response at the effective scale (of the order of millimeters) while modeling the vasculature at the microscale. We validate the multiscale method against a full scale (three-dimensional) model, where the fluid/tissue interface is fully discretized and treated as a Neumann boundary for the elasticity equation. Next, we present simulation results obtained with the proposed approach in a realistic scenario, demonstrating that the method can robustly and efficiently handle the one-way coupling between complex fluid microstructures and the elastic matrix.
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Affiliation(s)
- Luca Heltai
- International School for Advanced Studies (SISSA), Trieste, Italy
| | - Alfonso Caiazzo
- Weierstrass Institute for Applied Analysis and Stochastics (WIAS) Berlin, Mohrenstrasse 39, 10117, Berlin, Germany.
| | - Lucas O Müller
- University of Trento, Via Sommarive 14, 38123, Povo, Italy
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36
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Ninos G, Bartzis V, Merlemis N, Sarris IE. Uncertainty quantification implementations in human hemodynamic flows. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2021; 203:106021. [PMID: 33721602 DOI: 10.1016/j.cmpb.2021.106021] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Accepted: 02/19/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND AND OBJECTIVE Human hemodynamic modeling is usually influenced by uncertainties occurring from a considerable unavailability of information linked to the boundary conditions and the physical properties used in the numerical models. Calculating the effect of these uncertainties on the numerical findings along the cardiovascular system is a demanding process due to the complexity of the morphology of the body and the area dynamics. To cope with all these difficulties, Uncertainty Quantification (UQ) methods seem to be an ideal tool. RESULTS This study focuses on analyzing and summarizing some of the recent research efforts and directions of implementing UQ in human hemodynamic flows by analyzing 139 research papers. Initially, the suitability of applying this approach is analyzed and demonstrated. Then, an overview of the most significant research work in various fields of biomedical hemodynamic engineering is presented. Finally, it is attempted to identify any possible forthcoming directions for research and methodological progress of UQ in biomedical sciences. CONCLUSION This review concludes that by finding the best statistical methods and parameters to represent the propagated uncertainties, while achieving a good interpretation of the interaction between input-output, is crucial for implementing UQ in biomedical sciences.
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Affiliation(s)
- G Ninos
- Department of Biomedical Sciences, University of West Attica, 12243, Athens, Greece; Department of Mechanical Engineering, University of West Attica, 12244, Athens, Greece.
| | - V Bartzis
- Department of Food Science & Technology, University of West Attica, 12243, Athens, Greece
| | - N Merlemis
- Deptartment of Surveying and Geoinformatics Engineering, University of West Attica, 12243 Athens, Greece
| | - I E Sarris
- Department of Mechanical Engineering, University of West Attica, 12244, Athens, Greece
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37
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Coccarelli A, Carson JM, Aggarwal A, Pant S. A framework for incorporating 3D hyperelastic vascular wall models in 1D blood flow simulations. Biomech Model Mechanobiol 2021; 20:1231-1249. [PMID: 33683514 PMCID: PMC8298378 DOI: 10.1007/s10237-021-01437-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Accepted: 02/12/2021] [Indexed: 12/02/2022]
Abstract
We present a novel framework for investigating the role of vascular structure on arterial haemodynamics in large vessels, with a special focus on the human common carotid artery (CCA). The analysis is carried out by adopting a three-dimensional (3D) derived, fibre-reinforced, hyperelastic structural model, which is coupled with an axisymmetric, reduced order model describing blood flow. The vessel transmural pressure and lumen area are related via a Holzapfel–Ogden type of law, and the residual stresses along the thickness and length of the vessel are also accounted for. After a structural characterization of the adopted hyperelastic model, we investigate the link underlying the vascular wall response and blood-flow dynamics by comparing the proposed framework results against a popular tube law. The comparison shows that the behaviour of the model can be captured by the simpler linear surrogate only if a representative value of compliance is applied. Sobol’s multi-variable sensitivity analysis is then carried out in order to identify the extent to which the structural parameters have an impact on the CCA haemodynamics. In this case, the local pulse wave velocity (PWV) is used as index for representing the arterial transmission capacity of blood pressure waveforms. The sensitivity analysis suggests that some geometrical factors, such as the stress-free inner radius and opening angle, play a major role on the system’s haemodynamics. Subsequently, we quantified the differences in haemodynamic variables obtained from different virtual CCAs, tube laws and flow conditions. Although each artery presents a distinct vascular response, the differences obtained across different flow regimes are not significant. As expected, the linear tube law is unable to accurately capture all the haemodynamic features characterizing the current model. The findings from the sensitivity analysis are further confirmed by investigating the axial stretching effect on the CCA fluid dynamics. This factor does not seem to alter the pressure and flow waveforms. On the contrary, it is shown that, for an axially stretched vessel, the vascular wall exhibits an attenuation in absolute distension and an increase in circumferential stress, corroborating the findings of previous studies. This analysis shows that the new model offers a good balance between computational complexity and physics captured, making it an ideal framework for studies aiming to investigate the profound link between vascular mechanobiology and blood flow.
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Affiliation(s)
- Alberto Coccarelli
- Zienkiewicz Centre for Computational Engineering, College of Engineering, Swansea University, Swansea, UK.
| | - Jason M Carson
- Zienkiewicz Centre for Computational Engineering, College of Engineering, Swansea University, Swansea, UK
- Data Science Building, Swansea University Medical School, Swansea University, Swansea, UK
- HDR-UK Wales and Northern Ireland, Health Data Research UK, London, UK
| | - Ankush Aggarwal
- Glasgow Computational Engineering Centre, James Watt School of Engineering, University of Glasgow, Glasgow, UK
| | - Sanjay Pant
- Zienkiewicz Centre for Computational Engineering, College of Engineering, Swansea University, Swansea, UK
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38
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Kamali Shahri SM, Contarino C, Chifari F, Mahmoudi M, Gelman S. Function of arteries and veins in conditions of simulated cardiac arrest. ACTA ACUST UNITED AC 2021; 11:157-164. [PMID: 33842286 PMCID: PMC8022231 DOI: 10.34172/bi.2021.13] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Revised: 09/17/2020] [Accepted: 10/20/2020] [Indexed: 12/24/2022]
Abstract
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Introduction: The study examined the behavior of vasculature in conditions of eliminated cardiac function using mathematical modeling. In addition, we addressed the question of whether the stretch-recoil capability of veins, at least in part accounts for the slower response to simulated cardiac arrest. Methods: In the first set of computational experiments, blood flow and pressure patterns in veins and arteries during the first few seconds after cardiac arrest were assessed via a validated multi-scale mathematical model of the whole cardiovascular system, comprising cardiac dynamics, arterial and venous blood flow dynamics, and microcirculation. In the second set of experiments, the effects of stretch-recoil zones of venous vessels with different diameters and velocities on blood velocity and dynamic pressure analyzed using computational fluid dynamics (CFD) modeling. Results: In the first set of experiments, measurement of changes in velocity, dynamic pressure, and fluid flow revealed that the venous system responded to cardiac arrest more slowly compared to the arteries. This disparity might be due to the intrinsic characteristics of the venous system, including stretch-recoil and elastic fiber composition. In the second set of experiments, we attempted to determine the role of the stretch-recoil capability of veins in the slower response to cardiac arrest. During the second set of experiments, we found that this recoil behavior increased dynamic pressure, velocity, and blood flow. The enhancement in dynamic pressure through combining the results from both experiments yielded a 15-40% increase in maximum dynamic pressure due to stretch-recoil, depending on vein diameter under normal conditions. Conclusion: In the situation of cardiac arrest, the vein geometry changes continue, promoting smooth responses of the venous system. Moreover, the importance of such vein behavior in blood displacement may grow as the pressure on the venous side gradually decreases with time. Our experiments suggest that the driving force for venous return is the pressure difference that remains within the venous system after the energy coming from every ventricular systole spent to overcome the resistance created by arterial and capillary systems.
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Affiliation(s)
- Seyed Mehdi Kamali Shahri
- Department of Anesthesiology, Perioperative and Pain Medicine, Brigham and Women's Hospital, Harvard Medical School, MA, USA
| | | | | | - Morteza Mahmoudi
- Precision Health Program and Department of Radiology, Michigan State University, MI, USA
| | - Simon Gelman
- Department of Anesthesiology, Perioperative and Pain Medicine, Brigham and Women's Hospital, Harvard Medical School, MA, USA
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39
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Chakshu NK, Sazonov I, Nithiarasu P. Towards enabling a cardiovascular digital twin for human systemic circulation using inverse analysis. Biomech Model Mechanobiol 2020; 20:449-465. [PMID: 33064221 PMCID: PMC7979679 DOI: 10.1007/s10237-020-01393-6] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2020] [Accepted: 09/29/2020] [Indexed: 12/11/2022]
Abstract
An exponential rise in patient data provides an excellent opportunity to improve the existing health care infrastructure. In the present work, a method to enable cardiovascular digital twin is proposed using inverse analysis. Conventionally, accurate analytical solutions for inverse analysis in linear problems have been proposed and used. However, these methods fail or are not efficient for nonlinear systems, such as blood flow in the cardiovascular system (systemic circulation) that involves high degree of nonlinearity. To address this, a methodology for inverse analysis using recurrent neural network for the cardiovascular system is proposed in this work, using a virtual patient database. Blood pressure waveforms in various vessels of the body are inversely calculated with the help of long short-term memory (LSTM) cells by inputting pressure waveforms from three non-invasively accessible blood vessels (carotid, femoral and brachial arteries). The inverse analysis system built this way is applied to the detection of abdominal aortic aneurysm (AAA) and its severity using neural networks.
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Affiliation(s)
- Neeraj Kavan Chakshu
- Biomedical Engineering Group, Zienkiewicz Centre for Computational Engineering, College of Engineering, Swansea University, Swansea, SA2 8PP, UK
| | - Igor Sazonov
- Biomedical Engineering Group, Zienkiewicz Centre for Computational Engineering, College of Engineering, Swansea University, Swansea, SA2 8PP, UK
| | - Perumal Nithiarasu
- Biomedical Engineering Group, Zienkiewicz Centre for Computational Engineering, College of Engineering, Swansea University, Swansea, SA2 8PP, UK.
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40
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Donahue WP, Newhauser WD, Wong H, Moreno J, Dey J, Wilson VL. Computational feasibility of calculating the steady-state blood flow rate through the vasculature of the entire human body. Biomed Phys Eng Express 2020; 6:055026. [PMID: 33444257 DOI: 10.1088/2057-1976/abaf5d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
The human body contains approximately 20 billion individual blood vessels that deliver nutrients and oxygen to tissues. While blood flow is a well-developed field of research, no previous studies have calculated the blood flow rates through more than 5 million connected vessels. The goal of this study was to test if it is computationally feasible to calculate the blood flow rates through a vasculature equal in size to that of the human body. We designed and implemented a two-step algorithm to calculate the blood flow rates using principles of steady-state fluid dynamics. Steady-state fluid dynamics is an accurate approximation for the microvascular and venous structures in the human body. To determine the computational feasibility, we measured and evaluated the execution time, scalability, and memory usage to quantify the computational requirements. We demonstrated that it is computationally feasible to calculate the blood flow rate through 17 billion vessels in 6.5 hours using 256 compute nodes. The computational modeling of blood flow rate in entire organisms may find application in research on drug delivery, treatment of cancer metastases, and modulation of physiological performance.
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Affiliation(s)
- William P Donahue
- Department of Physics and Astronomy, Louisiana State University, Baton Rouge, LA, United States of America
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41
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Kedarasetti RT, Turner KL, Echagarruga C, Gluckman BJ, Drew PJ, Costanzo F. Functional hyperemia drives fluid exchange in the paravascular space. Fluids Barriers CNS 2020; 17:52. [PMID: 32819402 PMCID: PMC7441569 DOI: 10.1186/s12987-020-00214-3] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Accepted: 08/09/2020] [Indexed: 12/20/2022] Open
Abstract
The brain lacks a conventional lymphatic system to remove metabolic waste. It has been proposed that directional fluid movement through the arteriolar paravascular space (PVS) promotes metabolite clearance. We performed simulations to examine if arteriolar pulsations and dilations can drive directional CSF flow in the PVS and found that arteriolar wall movements do not drive directional CSF flow. We propose an alternative method of metabolite clearance from the PVS, namely fluid exchange between the PVS and the subarachnoid space (SAS). In simulations with compliant brain tissue, arteriolar pulsations did not drive appreciable fluid exchange between the PVS and the SAS. However, when the arteriole dilated, as seen during functional hyperemia, there was a marked exchange of fluid. Simulations suggest that functional hyperemia may serve to increase metabolite clearance from the PVS. We measured blood vessels and brain tissue displacement simultaneously in awake, head-fixed mice using two-photon microscopy. These measurements showed that brain deforms in response to pressure changes in PVS, consistent with our simulations. Our results show that the deformability of the brain tissue needs to be accounted for when studying fluid flow and metabolite transport.
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Affiliation(s)
- Ravi Teja Kedarasetti
- Center for Neural Engineering, The Pennsylvania State University, University Park, PA, USA
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA, USA
| | - Kevin L Turner
- Center for Neural Engineering, The Pennsylvania State University, University Park, PA, USA
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA, USA
| | - Christina Echagarruga
- Center for Neural Engineering, The Pennsylvania State University, University Park, PA, USA
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA, USA
| | - Bruce J Gluckman
- Center for Neural Engineering, The Pennsylvania State University, University Park, PA, USA
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA, USA
- Department of Neurosurgery, The Pennsylvania State University, University Park, PA, USA
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA, USA
| | - Patrick J Drew
- Center for Neural Engineering, The Pennsylvania State University, University Park, PA, USA.
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA, USA.
- Department of Neurosurgery, The Pennsylvania State University, University Park, PA, USA.
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA, USA.
| | - Francesco Costanzo
- Center for Neural Engineering, The Pennsylvania State University, University Park, PA, USA.
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA, USA.
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA, USA.
- Department of Mathematics, The Pennsylvania State University, University Park, PA, USA.
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42
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Cherevko AA, Gologush TS, Petrenko IA, Ostapenko VV, Panarin VA. Modelling of the arteriovenous malformation embolization optimal scenario. ROYAL SOCIETY OPEN SCIENCE 2020; 7:191992. [PMID: 32874606 PMCID: PMC7428277 DOI: 10.1098/rsos.191992] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Accepted: 06/23/2020] [Indexed: 06/11/2023]
Abstract
Cerebral arteriovenous malformation (AVM) is a congenital brain vessels pathology, in which the arterial and venous blood channels are connected by tangles of abnormal blood vessels. It is a dangerous disease that affects brain functioning causing the high risk of intracerebral haemorrhage. One of AVM treatment methods is embolization-the endovascular filling of the AVM vessel bundle with a special embolic agent. This method is widely used, but still in some cases is accompanied by intraoperative AVM vessels rupture. In this paper, the optimal scenario of AVM embolization is studied from the safety and effectiveness of the procedure point of view. The co-movement of blood and embolic agent in the AVM body is modelled on the basis of a one-dimensional two-phase filtration model. Optimal control problem with phase constraints arising from medicine is formulated and numerically solved. In numerical analysis, the monotone modification of the CABARET scheme is used. Optimal embolization model is constructed on the basis of real patients' clinical data collected during neurosurgical operations. For the special case of embolic agent, input admissible and optimal embolization scenarios were calculated.
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Affiliation(s)
- Alexandr A. Cherevko
- Lavrentyev Institute of Hydrodynamics of the Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia
- Hydrodynamics Department, Novosibirsk State University, 630090 Novosibirsk, Russia
| | - Tatiana S. Gologush
- Lavrentyev Institute of Hydrodynamics of the Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia
| | - Irina A. Petrenko
- Functional Analysis and its Applications Department, Vladimir State University, 600000 Vladimir, Russia
| | - Vladimir V. Ostapenko
- Lavrentyev Institute of Hydrodynamics of the Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia
- Hydrodynamics Department, Novosibirsk State University, 630090 Novosibirsk, Russia
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Donatelli D, Romagnoli L. Nonreflecting Boundary Conditions for a CSF Model of Fourth Ventricle: Spinal SAS Dynamics. Bull Math Biol 2020; 82:77. [PMID: 32535866 DOI: 10.1007/s11538-020-00749-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Accepted: 05/15/2020] [Indexed: 11/24/2022]
Abstract
In this paper, we introduce a one-dimensional model for analyzing the cerebrospinal fluid dynamics within the fourth ventricle and the spinal subarachnoid space (SSAS). The model has been derived starting from an original model of Linninger et al. and from the detailed mathematical analysis of two different reformulations. We show the steps of the modelization and the rigorous analysis of the first-order nonlinear hyperbolic system of equations which rules the new CSF model, whose conservative-law form and characteristic form are required for the boundary conditions treatment. By assuming sub-critical flows, for the particular dynamics we are dealing with, the most desirable option is to employ the nonreflecting boundary conditions, that allow the simple wave associated with the outgoing characteristic to exit the computational domain with no reflections. Finally, we carry out some numerical simulations related to different cerebral physiological conditions.
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Affiliation(s)
- Donatella Donatelli
- Department of Information Engineering, Computer Science and Mathematics, University of L'Aquila, 67100, L'Aquila, Italy.
| | - Licia Romagnoli
- Department of Information Engineering, Computer Science and Mathematics, University of L'Aquila, 67100, L'Aquila, Italy
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44
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Marx L, Gsell MAF, Rund A, Caforio F, Prassl AJ, Toth-Gayor G, Kuehne T, Augustin CM, Plank G. Personalization of electro-mechanical models of the pressure-overloaded left ventricle: fitting of Windkessel-type afterload models. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2020; 378:20190342. [PMID: 32448067 PMCID: PMC7287328 DOI: 10.1098/rsta.2019.0342] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 04/01/2020] [Indexed: 05/21/2023]
Abstract
Computer models of left ventricular (LV) electro-mechanics (EM) show promise as a tool for assessing the impact of increased afterload upon LV performance. However, the identification of unique afterload model parameters and the personalization of EM LV models remains challenging due to significant clinical input uncertainties. Here, we personalized a virtual cohort of N = 17 EM LV models under pressure overload conditions. A global-local optimizer was developed to uniquely identify parameters of a three-element Windkessel (Wk3) afterload model. The sensitivity of Wk3 parameters to input uncertainty and of the EM LV model to Wk3 parameter uncertainty was analysed. The optimizer uniquely identified Wk3 parameters, and outputs of the personalized EM LV models showed close agreement with clinical data in all cases. Sensitivity analysis revealed a strong dependence of Wk3 parameters on input uncertainty. However, this had limited impact on outputs of EM LV models. A unique identification of Wk3 parameters from clinical data appears feasible, but it is sensitive to input uncertainty, thus depending on accurate invasive measurements. By contrast, the EM LV model outputs were less sensitive, with errors of less than 8.14% for input data errors of 10%, which is within the bounds of clinical data uncertainty. This article is part of the theme issue 'Uncertainty quantification in cardiac and cardiovascular modelling and simulation'.
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Affiliation(s)
- Laura Marx
- Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging - Division of Biophysics, Medical University Graz, Graz, Austria
| | - Matthias A. F. Gsell
- Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging - Division of Biophysics, Medical University Graz, Graz, Austria
| | - Armin Rund
- Institute for Mathematics and Scientific Computing, University of Graz, Graz, Austria
| | - Federica Caforio
- Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging - Division of Biophysics, Medical University Graz, Graz, Austria
| | - Anton J. Prassl
- Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging - Division of Biophysics, Medical University Graz, Graz, Austria
| | - Gabor Toth-Gayor
- Department of Cardiology, Medical University Graz, Graz, Austria
| | - Titus Kuehne
- Institute for Cardiovascular Computer-assisted Medicine (ICM), Charité - Universitätsmedizin Berlin, Berlin, Germany
- Department of Imaging and Congenital Heart Disease, German Heart Center Berlin, Berlin, Germany
| | - Christoph M. Augustin
- Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging - Division of Biophysics, Medical University Graz, Graz, Austria
| | - Gernot Plank
- Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging - Division of Biophysics, Medical University Graz, Graz, Austria
- e-mail:
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45
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Bhogal P, Yeo LL, Müller LO, Blanco PJ. The Effects of Cerebral Vasospasm on Cerebral Blood Flow and the Effects of Induced Hypertension: A Mathematical Modelling Study. INTERVENTIONAL NEUROLOGY 2020; 8:152-163. [PMID: 32508897 DOI: 10.1159/000496616] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2018] [Accepted: 01/07/2019] [Indexed: 11/19/2022]
Abstract
Background Induced hypertension has been used to promote cerebral blood flow under vasospastic conditions although there is no randomised clinical trial to support its use. We sought to mathematically model the effects of vasospasm on the cerebral blood flow and the effects of induced hypertension. Methods The Anatomically Detailed Arterial Network (ADAN) model is employed as the anatomical substrate in which the cerebral blood flow is simulated as part of the simulation of the whole body arterial circulation. The pressure drop across the spastic vessel is modelled by inserting a specific constriction model within the corresponding vessel in the ADAN model. We altered the degree of vasospasm, the length of the vasospastic segment, the location of the vasospasm, the pressure (baseline mean arterial pressure [MAP] 90 mm Hg, hypertension MAP 120 mm Hg, hypotension), and the presence of collateral supply. Results Larger decreases in cerebral flow were seen for diffuse spasm and more severe vasospasm. The presence of collateral supply could maintain cerebral blood flow, but only if the vasospasm did not occur distal to the collateral. Induced hypertension caused an increase in blood flow in all scenarios, but did not normalise blood flow even in the presence of moderate vasospasm (30%). Hypertension in the presence of a complete circle of Willis had a marginally greater effect on the blood flow, but did not normalise flow. Conclusion Under vasospastic condition, cerebral blood flow varies considerably. Hypertension can raise the blood flow, but it is unable to restore cerebral blood flow to baseline.
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Affiliation(s)
- Pervinder Bhogal
- Department of Interventional Neuroradiology, The Royal London Hospital, London, United Kingdom
| | - Leonard Leong Yeo
- Division of Neurology, Department of Medicine, National University Health System, Singapore, Singapore
| | - Lucas O Müller
- National Laboratory for Scientific Computing, LNCC/MCTIC, Petrópolis, Brazil
| | - Pablo J Blanco
- National Laboratory for Scientific Computing, LNCC/MCTIC, Petrópolis, Brazil.,National Institute in Medicine Assisted by Scientific Computing, INCT-MACC, Petrópolis, Brazil
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46
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Font-Clos F, Zapperi S, La Porta CAM. Blood Flow Contributions to Cancer Metastasis. iScience 2020; 23:101073. [PMID: 32361595 PMCID: PMC7200936 DOI: 10.1016/j.isci.2020.101073] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Revised: 03/25/2020] [Accepted: 04/14/2020] [Indexed: 11/21/2022] Open
Abstract
The distribution patterns of cancer metastasis depend on a sequence of steps involving adhesion molecules and on mechanical and geometrical effects related to blood circulation, but how much each of these two aspects contributes to the metastatic spread of a specific tumor is still unknown. Here we address this question by simulating cancer cell trajectories in a high-resolution humanoid model of global blood circulation, including stochastic adhesion events, and comparing the results with the location of metastasis recorded in thousands of human autopsies for seven different solid tumors, including lung, prostate, pancreatic and colorectal cancers, showing that on average 40% of the variation in the metastatic distribution can be attributed to blood circulation. Our humanoid model of circulating tumor cells allows us to predict the metastatic spread in specific realistic conditions and can therefore guide precise therapeutic interventions to fight metastasis.
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Affiliation(s)
- Francesc Font-Clos
- Center for Complexity and Biosystems, Department of Physics, University of Milan, Via Celoria 16, 20133 Milano, Italy
| | - Stefano Zapperi
- Center for Complexity and Biosystems, Department of Physics, University of Milan, Via Celoria 16, 20133 Milano, Italy; CNR - Consiglio Nazionale delle Ricerche, Istituto di Chimica della Materia Condensata e di Tecnologie per l'Energia, Via R. Cozzi 53, 20125 Milano, Italy
| | - Caterina A M La Porta
- Center for Complexity and Biosystems, Department of Environmental Science and Policy, University of Milan, via Celoria 26, 20133 Milano, Italy; CNR - Consiglio Nazionale delle Ricerche, Istituto di Biofisica, via Celoria 26, 20133 Milano, Italy.
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47
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On the anatomical definition of arterial networks in blood flow simulations: comparison of detailed and simplified models. Biomech Model Mechanobiol 2020; 19:1663-1678. [DOI: 10.1007/s10237-020-01298-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2019] [Accepted: 01/21/2020] [Indexed: 11/25/2022]
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48
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Computational hemodynamics in arteries with the one-dimensional augmented fluid-structure interaction system: viscoelastic parameters estimation and comparison with in-vivo data. J Biomech 2019; 100:109595. [PMID: 31911051 DOI: 10.1016/j.jbiomech.2019.109595] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Revised: 12/19/2019] [Accepted: 12/21/2019] [Indexed: 12/21/2022]
Abstract
Mathematical models are widely recognized as a valuable tool for cardiovascular diagnosis and the study of circulatory diseases, especially to obtain data that require otherwise invasive measurements. To correctly simulate body hemodynamics, the viscoelastic properties of vessels walls are a key aspect to be taken into account as they play an essential role in cardiovascular behavior. The present work aims to apply the augmented fluid-structure interaction system of blood flow to real case studies to assess the validity of the model as a valuable resource to improve cardiovascular diagnostics and the treatment of pathologies. Main contributions of the paper include the evaluation of viscoelastic tube laws, estimation of viscoelastic parameters and comparison of models with literature results and in-vivo experiments. The ability of the model to correctly simulate pulse waveforms in single arterial segments is verified using literature benchmark test cases, designed taking into account a simple elastic behavior of the wall in the upper thoracic aorta and in the common carotid artery. Furthermore, in-vivo pressure waveforms, extracted from tonometric measurements performed on four human common carotid arteries and two common femoral arteries, are compared to numerical solutions. It is highlighted that the viscoelastic damping effect of arterial walls is required to avoid an overestimation of pressure peaks. Finally, an effective procedure to estimate the viscoelastic parameters of the model is herein proposed, which returns hysteresis curves of the common carotid arteries dissipating energy fractions in line with values calculated from literature hysteresis loops in the same vessel.
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49
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Yu H, Huang GP, Yang Z, Ludwig BR. Numerical studies of hemodynamic alterations in pre- and post-stenting cerebral aneurysms using a multiscale modeling. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2019; 35:e3256. [PMID: 31483953 DOI: 10.1002/cnm.3256] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2019] [Accepted: 09/01/2019] [Indexed: 06/10/2023]
Abstract
The aim of this work was to use a multiscale modeling to study the influence of stent deployment, with generic stents, on flow distributions within the vascular network and the hemodynamic alterations within the cerebral aneurysms pre- and post-stenting. To achieve this goal, two image-based anatomical cerebral aneurysm models were reconstructed along with the respective aneurysms post-stenting models after deploying a 16- or 24-wire stent. The investigation results revealed that the stent may increase the local pressure resistance resulting in flow alterations. The hemodynamic parameters demonstrated stent placement can reduce the intra-aneurysmal pressure, decrease wall shear stress (WSS) at the neck region, and increase blood turnover time for aneurysm case I (sidewall aneurysm). These findings are consistent with the trends of hemodynamic changes reported previously. However, aneurysm case II (bifurcation aneurysm) showed gradually increased intra-aneurysmal pressure and the pressure at the neck region, decreased WSS over the sac surface, and enhanced flow vortices within the aneurysm. When simulating the hemodynamics of pre- and post-stenting aneurysms for a patient using measured flow waveforms, the flow alteration induced by the stent deployment may affect the hemodynamic predictions for the post-stenting aneurysm. Thus, the remeasurement of boundary conditions once the morphology of the aneurysm is deformed is needed in follow-up studies with a focus on aneurysm growth and stent deployment.
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Affiliation(s)
- Hongtao Yu
- Department of Mechanical and Materials Engineering, Wright State University, Dayton, OH, 45435
| | - George P Huang
- Department of Mechanical and Materials Engineering, Wright State University, Dayton, OH, 45435
| | - Zifeng Yang
- Department of Mechanical and Materials Engineering, Wright State University, Dayton, OH, 45435
| | - Bryan R Ludwig
- Boonshoft School of Medicine, Wright State University, Dayton, OH, 45435
- Department of Neurology, Division of NeuroInterventional Surgery, Wright State University/Premier Health, Clinical Neuroscience Institute, 30 E. Apple St, Dayton, OH, 45409
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50
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Heusinkveld MHG, Huberts W, Lumens J, Arts T, Delhaas T, Reesink KD. Large vessels as a tree of transmission lines incorporated in the CircAdapt whole-heart model: A computational tool to examine heart-vessel interaction. PLoS Comput Biol 2019; 15:e1007173. [PMID: 31306411 PMCID: PMC6677326 DOI: 10.1371/journal.pcbi.1007173] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Revised: 08/02/2019] [Accepted: 06/10/2019] [Indexed: 11/29/2022] Open
Abstract
We developed a whole-circulation computational model by integrating a transmission line (TL) model describing vascular wave transmission into the established CircAdapt platform of whole-heart mechanics. In the present paper, we verify the numerical framework of our TL model by benchmark comparison to a previously validated pulse wave propagation (PWP) model. Additionally, we showcase the integrated CircAdapt-TL model, which now includes the heart as well as extensive arterial and venous trees with terminal impedances. We present CircAdapt-TL haemodynamics simulations of: 1) a systemic normotensive situation and 2) a systemic hypertensive situation. In the TL-PWP benchmark comparison we found good agreement regarding pressure and flow waveforms (relative errors ≤ 2.9% for pressure, and ≤ 5.6% for flow). CircAdapt-TL simulations reproduced the typically observed haemodynamic changes with hypertension, expressed by increases in mean and pulsatile blood pressures, and increased arterial pulse wave velocity. We observed a change in the timing of pressure augmentation (defined as a late-systolic boost in aortic pressure) from occurring after time of peak systolic pressure in the normotensive situation, to occurring prior to time of peak pressure in the hypertensive situation. The pressure augmentation could not be observed when the systemic circulation was lumped into a (non-linear) three-element windkessel model, instead of using our TL model. Wave intensity analysis at the carotid artery indicated earlier arrival of reflected waves with hypertension as compared to normotension, in good qualitative agreement with findings in patients. In conclusion, we successfully embedded a TL model as a vascular module into the CircAdapt platform. The integrated CircAdapt-TL model allows detailed studies on mechanistic studies on heart-vessel interaction.
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Affiliation(s)
- Maarten H. G. Heusinkveld
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
| | - Wouter Huberts
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
- Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, Netherlands
| | - Joost Lumens
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
| | - Theo Arts
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
| | - Tammo Delhaas
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
| | - Koen D. Reesink
- Department of Biomedical Engineering, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, Netherlands
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