14N Solid-State NMR Spectroscopy of Amino Acids

NMR crystallography of amino acids

The development of NMR crystallography methods requires a reliable database of chemical shifts measured for systems with known crystal structure. We measured and assigned carbon and hydrogen chemical shifts of twenty solid natural amino acids of known polymorphic structure, meticulously determined using powder X-ray diffraction. We then correlated the experimental data with DFT-calculated isotropic shieldings. The small size of the unit cell of most amino acids allowed for advanced computations using various families of DFT functionals, including generalized gradient approximation (GGA), meta-GGA and hybrid DFT functionals. We tested several combinations of functionals for geometry optimizations and NMR calculations. For carbon shieldings, the widely used GGA functional PBE performed very well, although an improvement could be achieved by adding shielding corrections calculated for isolated molecules using a hybrid functional. For hydrogen nuclei, we observed the best performance for NMR calculations carried out with structures optimized at the hybrid DFT level. The high fidelity of the calculations made it possible to assign additional signals that could not be assigned based on experiments alone, for example signals of two non-equivalent molecules in the unit cell of some of the amino acids.

Reducing the effects of weak homonuclear dipolar coupling with CPMG pulse sequences for static and spinning solids

The Carr-Purcell/Meiboom-Gill (CPMG) pulse sequence, initially introduced for measuring transverse relaxation time constants (T₂), can provide significant signal enhancements for solid-state NMR (SSNMR) spectra. The proper implementation of CPMG for acquiring spectra influenced by chemical shift anisotropies (CSAs), first and/or second order quadrupolar interactions, or paramagnetic broadening has been well documented to date, as have the effects of heteronuclear dipolar coupling on CPMG echo trains and T₂ lifetimes. Homonuclear dipolar coupling can also impact T₂ lifetimes and CPMG echo trains; these effects have been thoroughly investigated for spectra of homonuclear dipolar coupled spin-1/2 nuclei typically acquired under static conditions that are predominantly influenced by dipolar broadening (e.g., ¹H, ¹⁹F, etc.). In particular, it has been shown that short refocusing pulses with small flip angles can extend the effective T₂ (T₂^eff, the observed T₂ constant as impacted by experimental conditions) measured by CPMG sequences for strong homonuclear dipolar coupled spin-1/2 pairs under static conditions. To date, these effects have not been explored for (i) spin-1/2 nuclei that have significant CSAs and simultaneously feature weak homonuclear dipolar couplings, (ii) for quadrupolar nuclei that are also weakly homonuclear dipolar coupled, and (iii) for either of these cases under magic-angle spinning (MAS) conditions. Herein, we demonstrate that short refocusing pulses that cause small flip angles can reduce the attenuation of signal in CPMG echo trains resulting from dipolar dephasing caused by the weak homonuclear dipolar couplings. For both spin-1/2 and quadrupolar nuclei, this can lead to significant extensions in T₂^eff and signal enhancements of up to three times compared to conventional CPMG in favourable cases. These phenomena can occur under both static and magic-angle spinning (MAS) conditions, in the latter of which homonuclear couplings are reintroduced by rotational resonance (R²) recoupling. Experimental examples of ¹³C (I = 1/2), ²H (I = 1), ⁸⁷Rb (I = 3/2), ²³Na (I = 3/2), and ³⁵Cl (I = 3/2) NMR under static and MAS conditions, as well as simulations of these phenomena, are shown and discussed.

Nutraceuticals in Bulk and Dosage Forms: Analysis by 35Cl and 14N Solid-State NMR and DFT Calculations

This study uses ³⁵Cl and ¹⁴N solid-state NMR (SSNMR) spectroscopy and dispersion-corrected plane-wave density functional theory (DFT) calculations for the structural characterization of chloride salts of nutraceuticals in their bulk and dosage forms. For eight nutraceuticals, we measure the ³⁵Cl EFG tensor parameters of the chloride ions and use plane-wave DFT calculations to elucidate relationships between NMR parameters and molecular-level structure, which provide rapid NMR crystallographic assessments of structural features. We employ both ³⁵Cl direct excitation and ¹H→³⁵Cl cross-polarization methods to characterize a dosage form containing α-d-glucosamine HCl, observe possible impurity and/or adulterant phases, and quantify the weight percent of the active ingredient. To complement this, we also investigate ¹⁴N SSNMR spectroscopy and DFT calculations to characterize nitrogen atoms in the nutraceuticals. This includes a discussion of targeted acquisition experimental protocols (i.e., acquiring a select region of the overall pattern that features key discontinuities) that allow ultrawideline spectra to be acquired rapidly, even for unreceptive samples (i.e., those with long values of T₁(¹⁴N), short values of T₂^eff(¹⁴N), or very broad patterns). It is hoped that these experimental and computational protocols will be useful for the characterization of various solid forms of nutraceuticals (i.e., salts, polymorphs, hydrates, solvates, cocrystals, amorphous solid dispersions, etc.), help detect impurity and counterfeit solid phases in dosage forms, and serve as a foundation for future NMR crystallographic studies of nutraceutical solid forms, including studies using ab initio crystal structure prediction algorithms.

Broadband adiabatic inversion cross-polarization to integer-spin nuclei with application to deuterium NMR

Solid-state NMR (SSNMR) spectroscopy of integer-spin quadrupolar nuclei is important for the molecular-level characterization of a variety of materials and biological solids; of the integer spins, ² H (S = 1) is by far the most widely studied, due to its usefulness in probing dynamical motions. SSNMR spectra of integer-spin nuclei often feature very broad powder patterns that arise largely from the effects of the first-order quadrupolar interaction; as such, the acquisition of high-quality spectra continues to remain a challenge. The broadband adiabatic inversion cross-polarization (BRAIN-CP) pulse sequence, which is capable of cross-polarization (CP) enhancement over large bandwidths, has found success for the acquisition of SSNMR spectra of integer-spin nuclei, including ¹⁴ N (S = 1), especially when coupled with Carr-Purcell/Meiboom-Gill pulse sequences featuring frequency-swept WURST pulses (WURST-CPMG) for T₂ -based signal enhancement. However, to date, there has not been a systematic investigation of the spin dynamics underlying BRAIN-CP, nor any concrete theoretical models to aid in its parameterization for applications to integer-spin nuclei. In addition, the BRAIN-CP/WURST-CPMG scheme has not been demonstrated for generalized application to wideline or ultra-wideline (UW) ² H SSNMR. Herein, we provide a theoretical description of the BRAIN-CP pulse sequence for spin-1/2 → spin-1 CP under static conditions, featuring a set of analytical equations describing Hartmann-Hahn matching conditions and numerical simulations that elucidate a CP mechanism involving polarization transfer, coherence exchange, and adiabatic inversion. Several experimental examples are presented for comparison with theoretical models and previously developed integer-spin CP methods, demonstrating rapid acquisition of ² H NMR spectra from efficient broadband CP.

The many-body expansion approach to ab initio calculation of electric field gradients in molecular crystals

Accurate calculation of electric field gradients (EFGs) in molecular crystals, despite big advances in ab initio techniques, is still a challenge. Here, we present a new approach to calculate the EFGs in molecular crystals by employing the many-body expansion (MBE) technique with electrostatic embedding. This allows for (i) a reduction in the computational cost or an alternative increase in the level of theory (we use the MP2/6-311++G) and (ii) the ability to monitor EFG convergence by progressively adding more surrounding molecules and/or adding higher many-body interactions. We focus on the ¹⁴N EFG and study four (model) compounds in more detail: solid nitrogen, ethylamine, methylamine, and ammonia. Solid nitrogen is rather insensitive to neighbors; for ethylamine and methylamine, the 3-body interactions are found sufficient for a converged EFG, whereas for ammonia, even the inclusion of 5-body interactions is insufficient although convergence is anticipated. We then validate our technique by comparing the experimental and ab initio¹⁴N EFGs for 116 organic compounds utilizing their known crystal structures and published EFG. Overall, we find a very good agreement, with a small EFG rms error, which is probably due to other sources, rather than the MBE approximation.

On the use of frequency-swept pulses and pulses designed with optimal control theory for the acquisition of ultra-wideline NMR spectra

Frequency-swept (FS) pulses, such as wideband uniform-rate smooth-truncation (WURST) pulses, have found much success for the acquisition of ultra-wideline (UW) solid-state NMR spectra. In this preliminary study, new pulses and pulse sequences are explored in simulation and experimentally for several nuclei exhibiting UWNMR powder patterns under static conditions, including ¹¹⁹Sn (I = 1/2), ¹⁹⁵Pt (I = 1/2), ²H (I = 1), and ⁷¹Ga (I = 3/2). First, hyperbolic secant (HS) and tanh/tan (THT) pulses are tested and implemented as excitation and refocusing pulses in spin-echo and Carr-Purcell/Meiboom Gill (CPMG)-type sequences, and shown to have comparable performances to analogous WURST pulses. Second, optimal control theory (OCT) is utilized for the design of new Optimal Control Theory Optimized Broadband Excitation and Refocusing (OCTOBER) pulses, using carefully parameterized WURST, THT, and HS pulses as starting points. Some of the new OCTOBER pulses used in spin-echo sequences are capable of efficient broadband excitation and refocusing, in some cases resulting in spectra with increased signal enhancements over those obtained in experiments using conventional FS pulses. Finally, careful consideration of the spin dynamics of several systems, by monitoring of the time evolution of the density matrix via the Liouville-von Neumann equation and analysis of the time-resolved Fourier transforms of the pulses, lends insight into the underlying mechanisms of the FS and OCTOBER pulses. This is crucial for understanding their performance in terms of generating uniformly excited patterns of high signal intensity, and for identifying trends that may offer pathways to generalized parameterization and/or new pulse shapes.

Cohesive properties of the crystalline phases of twenty proteinogenic α-aminoacids from first-principles calculations

Cohesive properties (lattice and cohesive energy of the crystal and corresponding sublimation enthalpy) of the complete set of twenty enantiopure anhydrous proteinogenic amino acids are investigated using first-principles calculations. In contrast to neutral amino acid molecules in the vapor phase, all amino acids form crystals in their zwitterionic form. Therefore, reliable ab initio calculations of the proton transfer energy are an indispensable step of such calculations. Simplifying procedures, designed to rationalize the computational cost of the quasi-harmonic approximation, which proves too demanding if performed fully at the given quantum level of theory, are presented and tested. For this purpose, atomic multipoles (up to the quadrupoles) for the amoeba force field are parametrized for all amino acid zwitterions. While the calculated lattice energies of the amino acids range from 235-458 kJ mol-1 in absolute value, the proton transfer energies typically amount to 100-220 kJ mol-1, which translates to sublimation enthalpies ranging from 117-202 kJ mol-1, appreciably exceeding the sublimation enthalpy values common for nonionic molecular crystals. Critically assessed experimental data on sublimation enthalpies are used as a benchmark for comparison of the data calculated in this work. Cohesive properties of most amino acids calculated in this work, combining the PBE-D3(BJ)/PAW and CCSD(T)-F12/aug-cc-pVDZ levels of theory used for predictions of the lattice energies and of the proton transfer energies, respectively, exhibit a reasonable agreement with the experiment. At the same time, this work contains the first published data on cohesive properties for several enantiopure amino acids.

Evaluation of excitation schemes for indirect detection of 14N via solid-state HMQC NMR experiments

It has previously been shown that ¹⁴N NMR spectra can be reliably obtained through indirect detection via HMQC experiments. This method exploits the transfer of coherence between single-(SQ) or double-quantum (DQ) ¹⁴N coherences, and SQ coherences of a suitable spin-1/2 'spy' nucleus, e.g., ¹H. It must be noted that SQ-SQ methods require a carefully optimized setup to minimize the broadening related to the first-order quadrupole interaction (i.e., an extremely well-adjusted magic angle and a highly stable spinning speed), whereas DQ-SQ ones do not. In this work, the efficiencies of four ¹⁴N excitation schemes (DANTE, XiX, Hard Pulse (HP), and Selective Long Pulse (SLP)) are compared using J-HMQC based numerical simulations and either SQ-SQ or DQ-SQ ¹H-{¹⁴N} D-HMQC experiments on l-histidine HCl and N-acetyl-l-valine at 18.8 T and 62.5 kHz MAS. The results demonstrate that both DANTE and SLP provide a more efficient ¹⁴N excitation profile than XiX and HP. Furthermore, it is shown that the SLP scheme: (i) is efficient over a large range of quadrupole interaction, (ii) is highly robust to offset and rf-pulse length and amplitude, and (iii) is very simple to set up. These factors make SLP ideally suited to widespread, non-specialist use in solid-state NMR analyses of nitrogen-containing materials.

Indirect detection of broad spectra in solid-state NMR using interleaved DANTE trains

We analyze the performances and the optimization of ¹H-{I} HMQC experiments using basic and interleaved DANTE schemes for the indirect detection of nuclei I = 1/2 or 1 exhibiting wide lines dominated by chemical shift anisotropy (CSA) or quadrupole interaction, respectively. These sequences are first described using average Hamiltonian theory. Then, we analyze using numerical simulations (i) the optimal lengths of the DANTE train and the individual pulses, (ii) the robustness of these experiments to offset, and (iii) the optimal choice of the defocusing and refocusing times for both ¹H-{I} J- and D-HMQC sequences for ¹⁹⁵Pt (I = 1/2) and ¹⁴N (I = 1) nuclei subject to large CSA and quadrupole interaction, respectively. These simulations are compared to ¹H-{¹⁴N} D-HMQC experiments on γ-glycine and L-histidine.HCl at B₀ = 18.8 T and MAS frequency of 62.5 kHz. The present study shows that (i) the optimal defocusing and refocusing times do not depend on the chosen DANTE scheme, (ii) the DANTE trains must be applied with the highest rf-field compatible with the probe specifications and the stability of the sample, (iii) the excitation bandwidth along the indirect dimension of HMQC sequence using DANTE trains is inversely proportional to their length, (iv) interleaved DANTE trains increase the excitation bandwidth of these sequences, and (v) dephasing under residual ¹H-¹H and ¹H-I dipolar couplings, as well as ¹⁴N second-order quadrupole interaction, during the length of the DANTE scheme attenuate the transfer efficiency.

14N overtone nuclear magnetic resonance of rotating solids

By irradiating and observing at twice the 14N Larmor frequency, overtone (OT) nuclear magnetic resonance (NMR) is capable of obtaining 14NOT spectra without first-order quadrupolar broadening. Direct excitation and detection of the usually "forbidden" double-quantum transition is mediated by the perturbation from the large quadrupole interaction to the spin states quantized by the Zeeman interaction. A recent study [L. A. O'Dell and C. I. Ratcliffe, Chem. Phys. Lett. 514, 168 (2011)] has shown that 14NOT NMR under magic-angle spinning (MAS) can yield high-resolution spectra with typical second-order quadrupolar line shapes allowing the measurement of 14N chemical shift and quadrupolar coupling parameters. This article has also shown that under MAS the main 14NOT peak is shifted by twice the sample spinning frequency with respect to its static position. We present the theory of 14NOT NMR of static or rotating samples and the physical picture of the intriguing spinning-induced shift in the second case. We use perturbation theory for the case of static samples and Floquet theory for rotating samples. In both cases, the results can be described by a so-called OT parameter that scales down the 14NOT radio-frequency (rf) excitation and signal detection. This OT parameter shows that the components of the rf field, which are transverse and longitudinal with respect to the magnetic field, are both effective for 14NOTrf excitation and signal detection. In the case of MAS at angular frequency ωr , the superposition of the excitation and detection components in the OT parameter makes either the +2ωr or -2ωr term the dominant 14NOT signal, depending on the sense of sample spinning with respect to the magnetic field. This leads to an apparent 14NOT signal shifted at twice the spinning frequency. The features of 14NOT NMR spectra for both static and rotating samples are illustrated with simulations. The spinning induced shift and its dependence on the spinning direction are confirmed experimentally by reversing the spinning direction and the field of the 36 T series-connected hybrid magnet at the US National High Magnetic Field Laboratory.

Pharmaceutical cocrystals, salts and polymorphs: Advanced characterization techniques

The main goal of a novel drug development is to obtain it with optimal physiochemical, pharmaceutical and biological properties. Pharmaceutical companies and scientists modify active pharmaceutical ingredients (APIs), which often are cocrystals, salts or carefully selected polymorphs, to improve the properties of a parent drug. To find the best form of a drug, various advanced characterization methods should be used. In this review, we have described such analytical methods, dedicated to solid drug forms. Thus, diffraction, spectroscopic, thermal and also pharmaceutical characterization methods are discussed. They all are necessary to study a solid API in its intrinsic complexity from bulk down to the molecular level, gain information on its structure, properties, purity and possible transformations, and make the characterization efficient, comprehensive and complete. Furthermore, these methods can be used to monitor and investigate physical processes, involved in the drug development, in situ and in real time. The main aim of this paper is to gather information on the current advancements in the analytical methods and highlight their pharmaceutical relevance.

Practical considerations for the acquisition of ultra-wideline 14N NMR spectra

Several considerations for the acquisition, processing, and analysis of high quality ultra-wideline (UW) ¹⁴N solid-state NMR (SSNMR) powder patterns under static conditions are discussed. It is shown that the ¹⁴N quadrupolar parameters may be determined accurately using the frequencies of only two discontinuities in ¹⁴N NMR powder patterns that are dominated by the first-order quadrupolar interaction, thereby eliminating the need for the acquisition of the entire pattern and concomitantly reducing experimental time. A framework for utilizing the WURST-CPMG pulse sequence to improve the efficiency of UW ¹⁴N SSNMR experiments is explored in two parts: (i) a systematic investigation of the design and parameterization of the WURST pulse is presented, and (ii) the development of the practical aspects of CPMG refocusing for the acquisition of UW ¹⁴N SSNMR powder patterns is discussed, with a focus on maximizing both signal-to-noise and resolution, and minimizing spectral distortions. Finally, a strategy is demonstrated that allows for the measurement of the ¹⁴N quadrupolar parameters for any nitrogen moiety whose quadrupolar coupling constant falls within the range 0.8≤|C_Q|≤1.5MHz, by acquiring only two ¹⁴N NMR sub-spectra at strategically located transmitter frequencies; these results are compared to full powder patterns which are acquired using frequency-stepped methods. The methodologies and practical considerations outlined herein are not only useful for the rapid acquisition of UW ¹⁴N NMR spectra, but may also be modified and applied for UW NMR of a plethora of quadrupolar and spin-1/2 nuclides.

14N NQR lineshape in nanocrystals: An ab initio investigation of urea

¹⁴N nuclear quadrupole resonance (NQR) lineshapes mostly contain information of low interest, although in nanocrystals they may display some unexpected behaviour. In this work, we present an ab initio computational study of the ¹⁴N NQR lineshapes in urea nanocrystals as a function of the nanocrystal size and geometry, focusing on the surface induced broadening of the lineshapes. The lineshapes were obtained through a calculation of the electric field gradient for each nitrogen site in the nanocrystal separately, taking into account the individual crystal field by embedding the molecule of interest in a suitable lattice of point multipoles representing other urea molecules in the nanocrystal. The small influence of distant molecules is found with a series expansion, using the in-crystal Sternheimer shieldings which we also calculated ab initio. We have considered nanocrystals with two geometries: a sphere and a cube, with characteristic sizes between 5 and 100 nm. Our calculations suggest that there is a dramatic difference between the linewidths for the two geometries. For spheres, we find a steep drop in linewidths at ∼10 nm; at 5 nm the linewidth is ∼11 kHz, whereas for sizes above 20 nm the linewidth is practically negligible (<100 Hz). For cubes, on the other hand, we find a steady 1/size decrease, from 12 kHz at 10 nm to 1.2 kHz at 100 nm. This analysis is important for ¹⁴N NQR spectroscopy of crystalline pharmaceuticals, where nanoparticles are increasingly more often embedded in some sort of matrix. Although this is only a theoretical analysis, we believe that this work can serve as a guidance for the forthcoming experimental analysis.