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Bertho G, Oumezziane IE, Caradeuc C, Guibout L, Balducci C, Dinan L, Dilda PJ, Camelo S, Lafont R, Giraud N. Structural analysis of unstable norbixin isomers guided by pure shift nuclear magnetic resonance. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2022; 60:504-514. [PMID: 35075680 DOI: 10.1002/mrc.5252] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 01/19/2022] [Accepted: 01/20/2022] [Indexed: 06/14/2023]
Abstract
We report the analysis of complex samples obtained during the microwave irradiation/heating of norbixin, which has been identified as a potential therapeutic target for age-related macular degeneration (AMD). In this context, identifying the different isomers that are obtained during its degradation is of primary importance. However, this characterization is challenging because, on the one hand, some of these isomers are unstable, and on the other hand, the 1 H spectra of these isomeric mixtures are poorly resolved. We could successfully apply 1D pure shift experiments to obtain ultrahigh-resolution 1 H nuclear magnetic resonance (NMR) spectra of the norbixin isomer samples and exploit their information content to analyze complementary 2D NMR data and describe accurately their isomeric composition.
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Affiliation(s)
- Gildas Bertho
- Université de Paris, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
| | - Imed Eddine Oumezziane
- Université de Paris, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
| | - Cédric Caradeuc
- Université de Paris, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
| | | | | | | | | | | | - René Lafont
- Biophytis, Sorbonne University, Paris, France
- Paris-Seine Biology Institute (BIOSIPE), CNRS, Sorbonne University, Paris, France
| | - Nicolas Giraud
- Université de Paris, CNRS, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Paris, France
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Lin Y, Yan M, Su J, Huang Y, Feng J, Chen Z. Improving efficiency of measuring individual 1H coupling networks by pure shift 2D J-resolved NMR spectroscopy. J Chem Phys 2020; 153:174114. [PMID: 33167634 DOI: 10.1063/5.0025962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The 1H coupling networks, including 1H-1H correlation and J coupling values, provide the important information for structure elucidation and conformation analysis. However, the presence of a large number of couplings and the phase-twist lineshapes often prevents revealing 1H coupling networks. Here, we provide a clean absorption-mode 2D NMR method, SIMAJ (SImple Methods for 2D Absorption mode J-resolved spectrum), for a straightforward assignment and measurement of the coupling network involving the chosen proton. Relying on the pure shift element, 1H-1H couplings and chemical shift evolution are totally separately demonstrating along the F1 and F2 dimensions, respectively. Processing with a single experiment dataset and free of 45° spectral shearing, an absorption-mode 2D J-resolved spectrum can be reconstructed. Two pulse sequences were proposed as examples. The SIMAJ signal processing method will be a general procedure for obtaining absorption-mode lineshapes when analyzing the experiment datasets with chemical shifts and J coupling multiplets in the orthogonal dimensions. With excellent sensitivity, high spectral purity, and ability of easily identifying 1H-1H correlations, significant improvements are beneficial for structural, conformational, or complex composition analyses.
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Affiliation(s)
- Yulan Lin
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Ming Yan
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Jianwei Su
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Yuqing Huang
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Jianghua Feng
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Zhong Chen
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory for Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
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Aloui G, Bouabdallah S, Baltaze JP, Pucheta JEH, Touil S, Farjon J, Giraud N. Monitoring Conformational Changes in an Enzyme Conversion Inhibitor Using Pure Shift Exchange NMR Spectroscopy. Chemphyschem 2019; 20:1738-1746. [PMID: 31033157 DOI: 10.1002/cphc.201900244] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Revised: 04/25/2019] [Indexed: 11/06/2022]
Abstract
We report the acquisition of 2D NMR EXSY spectra with ultrahigh resolution, which allows for probing the slow conformational exchange process in a pharmaceutical compound. The resolution enhancement is achieved by implementing interferogram based PSYCHE homonuclear decoupling to generate a pure shift proton spectrum along the direct domain of the resulting data. The performance of this pure shift EXSY pulse sequence is compared to the standard experiment recorded under identical conditions. It is found that although being less sensitive and requiring a longer acquisition time, the quality of pure shift spectra allows for extracting exchange rates values that are coherent with the ones determined by standard approach, on a temperature range that demonstrates the robustness of the chosen homonuclear decoupling method. The resolution enhancement provided by the simplification of proton line shape allows for probing a higher number of proton sites whose analysis would have been biased using a standard method. These results open the way to a thorough and accurate study of chemical exchange processes based on a multi-site analysis of 2D pure shift EXSY spectra.
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Affiliation(s)
- G Aloui
- Université Paris Saclay, Institut de Chimie Moléculaire et des Matériaux d'Orsay Equipe RMN en Milieu Orienté UMR CNRS-UPS 8182, 91405, Orsay, France.,Laboratory of Hetero-Organic Compounds and Nanostructured Materials, University of Carthage, Faculty of Sciences of Bizerte, 7021, Jarzouna, Tunisia
| | - S Bouabdallah
- Laboratory of Hetero-Organic Compounds and Nanostructured Materials, University of Carthage, Faculty of Sciences of Bizerte, 7021, Jarzouna, Tunisia
| | - J P Baltaze
- Université Paris Saclay, Institut de Chimie Moléculaire et des Matériaux d'Orsay Equipe RMN en Milieu Orienté UMR CNRS-UPS 8182, 91405, Orsay, France
| | - J E H Pucheta
- Consejo Nacional de Ciencia y Tecnología - Laboratorio Nacional de Investigación y Servicio Agroalimentario y Forestal, Universidad Autónoma Chapingo, Km. 38.5 Carretera México-Texcoco, Chapingo, 56230, Estado de México, México
| | - S Touil
- Laboratory of Hetero-Organic Compounds and Nanostructured Materials, University of Carthage, Faculty of Sciences of Bizerte, 7021, Jarzouna, Tunisia
| | - J Farjon
- CEISAM UMR CNRS 6230, Faculté des Sciences et Techniques, 2 rue de la Houssinière, BP, 92208, 44322 Nantes cedex 3, France
| | - N Giraud
- Université Paris Saclay, Institut de Chimie Moléculaire et des Matériaux d'Orsay Equipe RMN en Milieu Orienté UMR CNRS-UPS 8182, 91405, Orsay, France.,Laboratory of Pharmacological and Toxicological Chemistry and Biochemistry, Université Paris Descartes, Sorbonne Paris Cité, 45 rue des Saints Pères, 75006, Paris, France
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