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Norvaisa K, Torres-Huerta A, Valkenier H. Synthetic transporters for oxoanions. Curr Opin Chem Biol 2024; 83:102542. [PMID: 39541647 DOI: 10.1016/j.cbpa.2024.102542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2024] [Revised: 10/08/2024] [Accepted: 10/11/2024] [Indexed: 11/16/2024]
Abstract
This brief review highlights recent advances in the transport of oxoanions using synthetic carriers, focusing on both progress and ongoing challenges in the field. The difficulty of transporting these oxoanions increases with their hydration enthalpies, with less hydrated nitrate and perchlorate being relatively easy to transport. Recent progress has focused on the transport of moderately hydrated anions such as bicarbonate and carboxylates, where studies are influenced by the free diffusion of neutral species obtained by (de)protonation equilibria. Despite significant innovations in the design of synthetic carriers, the transport of the highly hydrated oxoanions sulfate and phosphate remains a major challenge. Progress on sulfate transport has stalled, while the first example of phosphate transport was reported only last year.
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Affiliation(s)
- Karolis Norvaisa
- Université libre de Bruxelles (ULB), Engineering of Molecular NanoSystems, Ecole Polytechnique de Bruxelles, Avenue F. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium
| | - Aaron Torres-Huerta
- Université libre de Bruxelles (ULB), Engineering of Molecular NanoSystems, Ecole Polytechnique de Bruxelles, Avenue F. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium
| | - Hennie Valkenier
- Université libre de Bruxelles (ULB), Engineering of Molecular NanoSystems, Ecole Polytechnique de Bruxelles, Avenue F. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium.
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2
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Singh A, Torres-Huerta A, Meyer F, Valkenier H. Anion transporters based on halogen, chalcogen, and pnictogen bonds: towards biological applications. Chem Sci 2024:d4sc04644g. [PMID: 39268212 PMCID: PMC11385378 DOI: 10.1039/d4sc04644g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Accepted: 09/01/2024] [Indexed: 09/15/2024] Open
Abstract
Motivated by their potential biological applications, anion receptors are increasingly explored as transmembrane transporters for anions. The vast majority of the reported anion transporters rely on hydrogen bonding to interact with the anions. However, in recent decades, halogen, chalcogen, and pnictogen bonding, collectively referred to as sigma-hole interactions, have received increasing attention. Most research efforts on these interactions have focused on crystal engineering, anion sensing, and organocatalysis. In recent years, however, these sigma-hole interactions have also been explored more widely in synthetic anion transporters. This perspective shows why synthetic transporters are promising candidates for biological applications. We provide a comprehensive review of the compounds used to transport anions across membranes, with a particular focus on how the binding atoms and molecular design affect the anion transport activity and selectivity. Few cell studies have been reported for these transporters based on sigma-hole interactions and we highlight the critical need for further biological studies on the toxicity, stability, and deliverability of these compounds to explore their full potential in biological applications, such as the treatment of cystic fibrosis.
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Affiliation(s)
- Anurag Singh
- Université libre de Bruxelles (ULB), Engineering of Molecular NanoSystems Avenue F. Roosevelt 50, CP165/64 1050 Brussels Belgium
| | - Aaron Torres-Huerta
- Université libre de Bruxelles (ULB), Engineering of Molecular NanoSystems Avenue F. Roosevelt 50, CP165/64 1050 Brussels Belgium
| | - Franck Meyer
- Université libre de Bruxelles (ULB), Microbiology, Bioorganic and Macromolecular Chemistry Unit, Faculty of Pharmacy Boulevard du Triomphe 1050 Brussels Belgium
| | - Hennie Valkenier
- Université libre de Bruxelles (ULB), Engineering of Molecular NanoSystems Avenue F. Roosevelt 50, CP165/64 1050 Brussels Belgium
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Alfonso I. Supramolecular chemical biology: designed receptors and dynamic chemical systems. Chem Commun (Camb) 2024; 60:9692-9703. [PMID: 39129537 DOI: 10.1039/d4cc03163f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/13/2024]
Abstract
Supramolecular chemistry focuses on the study of species joined by non-covalent interactions, and therefore on dynamic and relatively ill-defined structures. Despite being a well-developed field, it has to face important challenges when dealing with the selective recognition of biomolecules in highly competitive biomimetic media. However, supramolecular interactions reside at the core of chemical biology systems, since many processes in nature are governed by weak, non-covalent, strongly dynamic contacts. Therefore, there is a natural connection between these two research fields, which are not frequently related or share interests. In this feature article, I will highlight our most recent results in the molecular recognition of biologically relevant species, following different conceptual approaches from the most conventional design of elaborated receptors to the less popular dynamic combinatorial chemistry methodology. Selected illustrative examples from other groups will be also included. The discussion has been focused mainly on systems with potential biomedical applications.
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Affiliation(s)
- Ignacio Alfonso
- Department of Biological Chemistry, Institute for Advanced Chemistry of Catalonia (IQAC), The Spanish National Research Council (CSIC), Jordi Girona 18-26, 08034, Barcelona, Spain.
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Jurek P, Szymański MP, Szumna A. Remote control of anion binding by CH-based receptors. Chem Commun (Camb) 2024; 60:3417-3420. [PMID: 38441137 DOI: 10.1039/d3cc06038a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2024]
Abstract
We show that the substitution of tetra(benzimidazole)resorcin[4]arenes with electron withdrawing groups on the upper rim enhances anion binding at the opposite edge by more than three orders of magnitude. Moreover, selective anion binding at either the OH/NH or CH binding sites is demonstrated.
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Affiliation(s)
- Paulina Jurek
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, Warsaw 01-224, Poland.
| | - Marek P Szymański
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, Warsaw 01-224, Poland.
| | - Agnieszka Szumna
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, Warsaw 01-224, Poland.
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Kim HJ, Hong JH. Multiple Regulatory Signals and Components in the Modulation of Bicarbonate Transporters. Pharmaceutics 2024; 16:78. [PMID: 38258089 PMCID: PMC10820580 DOI: 10.3390/pharmaceutics16010078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Revised: 01/01/2024] [Accepted: 01/03/2024] [Indexed: 01/24/2024] Open
Abstract
Bicarbonate transporters are responsible for the appropriate flux of bicarbonate across the plasma membrane to perform various fundamental cellular functions. The functions of bicarbonate transporters, including pH regulation, cell migration, and inflammation, are highlighted in various cellular systems, encompassing their participation in both physiological and pathological processes. In this review, we focused on recently identified modulatory signaling components that regulate the expression and activity of bicarbonate transporters. Moreover, we addressed recent advances in our understanding of cooperative systems of bicarbonate transporters and channelopathies. This current review aims to provide a new, in-depth understanding of numerous human diseases associated with the dysfunction of bicarbonate transporters.
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Affiliation(s)
| | - Jeong Hee Hong
- Department of Physiology, Lee Gil Ya Cancer and Diabetes Institute, College of Medicine, Gachon University, 155 Getbeolro, Yeonsu-gu, Incheon 21999, Republic of Korea;
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Zhong J, Dong J, Ruan W, Duan X. Potential Theranostic Roles of SLC4 Molecules in Human Diseases. Int J Mol Sci 2023; 24:15166. [PMID: 37894847 PMCID: PMC10606849 DOI: 10.3390/ijms242015166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 09/28/2023] [Accepted: 10/03/2023] [Indexed: 10/29/2023] Open
Abstract
The solute carrier family 4 (SLC4) is an important protein responsible for the transport of various ions across the cell membrane and mediating diverse physiological functions, such as the ion transporting function, protein-to-protein interactions, and molecular transduction. The deficiencies in SLC4 molecules may cause multisystem disease involving, particularly, the respiratory system, digestive, urinary, endocrine, hematopoietic, and central nervous systems. Currently, there are no effective strategies to treat these diseases. SLC4 proteins are also found to contribute to tumorigenesis and development, and some of them are regarded as therapeutic targets in quite a few clinical trials. This indicates that SLC4 proteins have potential clinical prospects. In view of their functional characteristics, there is a critical need to review the specific functions of bicarbonate transporters, their related diseases, and the involved pathological mechanisms. We summarize the diseases caused by the mutations in SLC4 family genes and briefly introduce the clinical manifestations of these diseases as well as the current treatment strategies. Additionally, we illustrate their roles in terms of the physiology and pathogenesis that has been currently researched, which might be the future therapeutic and diagnostic targets of diseases and a new direction for drug research and development.
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Affiliation(s)
| | | | | | - Xiaohong Duan
- State Key Laboratory of Oral & Maxillofacial Reconstruction and Regeneration, National Clinical Research Center for Oral Disease, Shaanxi Key Laboratory of Stomatology, Department of Oral Biology & Clinic of Oral Rare Diseases and Genetic Diseases, School of Stomatology, The Fourth Military Medical University, Xi’an 710032, China; (J.Z.); (J.D.); (W.R.)
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Pamuła M, Bulatov E, Martínez-Crespo L, Kiesilä A, Naulapää J, Kalenius E, Helttunen K. Anion binding and transport with meso-alkyl substituted two-armed calix[4]pyrroles bearing urea and hydroxyl groups. Org Biomol Chem 2023; 21:6595-6603. [PMID: 37530577 DOI: 10.1039/d3ob00919j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/03/2023]
Abstract
Calix[4]pyrroles bearing hydroxyl (1) or urea (3) groups attached to the meso-positions with propyl linkers were synthesized as cis- and trans-isomers. The anion binding properties of cis-1 and cis-3 were screened with ion-mobility mass spectrometry, where cis-1 formed complexes with Cl-, Br- and H2PO4-, whereas cis-3 formed complexes with most of the investigated anions, including Cl-, Br-, I-, NO3-, ClO4-, OTf-, SCN- and PF6-. The structures of the chloride complexes were further elucidated with density functional theory calculations and a crystal structure obtained for cis-1. In solution, chloride and dihydrogenphosphate anion binding with cis-1 and cis-3 were compared using 1H NMR titrations. To assess the suitability of two-armed calix[4]pyrroles as anion transporters, chloride transport studies of cis-1, cis-3 and trans-3 were performed using large unilamellar vesicles. The results revealed that cis-3 had the highest activity among the investigated calix[4]pyrroles, which was related to the improved affinity and isolation of chloride inside the binding cavity of cis-3 in comparison to cis-1. The results indicate that appending calix[4]pyrroles with two hydrogen bonding arms is a feasible strategy to obtain anion transporters and receptors with high anion affinity.
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Affiliation(s)
- Małgorzata Pamuła
- University of Jyvaskyla, Department of Chemistry, Nanoscience Center, P.O. Box 35, FI-40014 University of Jyvaskyla, Finland.
| | - Evgeny Bulatov
- University of Jyvaskyla, Department of Chemistry, Nanoscience Center, P.O. Box 35, FI-40014 University of Jyvaskyla, Finland.
| | - Luis Martínez-Crespo
- Department of Chemistry, Universitat de les Illes Balears, Cra. Valldemossa Km. 7.5, 07122 Palma de Mallorca, Spain
| | - Anniina Kiesilä
- University of Jyvaskyla, Department of Chemistry, Nanoscience Center, P.O. Box 35, FI-40014 University of Jyvaskyla, Finland.
| | - Julia Naulapää
- University of Jyvaskyla, Department of Chemistry, Nanoscience Center, P.O. Box 35, FI-40014 University of Jyvaskyla, Finland.
| | - Elina Kalenius
- University of Jyvaskyla, Department of Chemistry, Nanoscience Center, P.O. Box 35, FI-40014 University of Jyvaskyla, Finland.
| | - Kaisa Helttunen
- University of Jyvaskyla, Department of Chemistry, Nanoscience Center, P.O. Box 35, FI-40014 University of Jyvaskyla, Finland.
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Cataldo A, Norvaisa K, Halgreen L, Bodman SE, Bartik K, Butler SJ, Valkenier H. Transmembrane Transport of Inorganic Phosphate by a Strapped Calix[4]pyrrole. J Am Chem Soc 2023. [PMID: 37471295 DOI: 10.1021/jacs.3c04631] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/22/2023]
Abstract
Synthetic anion receptors are increasingly being explored for the transport of anions across lipid membranes because of their potential therapeutic applications. A considerable amount of research focuses on the transport of chloride, whereas the transmembrane transport of inorganic phosphate has not been reported to date, despite the biological relevance of this anion. Here we present a calix[4]pyrrole with a bisurea strap that functions as a receptor and transporter for H2PO4-, relying on the formation of eight hydrogen bonds and efficient encapsulation of the anion. Using a phosphate-sensitive lanthanide probe and 31P NMR spectroscopy, we demonstrate that this receptor can transport phosphate into vesicles by H2PO4-/Cl- antiport, H2PO4- uniport, and Cs+/H2PO4- symport mechanisms. This first example of inorganic phosphate transport by a neutral receptor opens perspectives for the future development of transporters for various biological phosphates.
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Affiliation(s)
- Alessio Cataldo
- Engineering of Molecular NanoSystems, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium
| | - Karolis Norvaisa
- Engineering of Molecular NanoSystems, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium
| | - Lau Halgreen
- Engineering of Molecular NanoSystems, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium
| | - Samantha E Bodman
- Department of Chemistry, Loughborough University, Epinal Way, Loughborough, LE11 3TU, U.K
| | - Kristin Bartik
- Engineering of Molecular NanoSystems, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium
| | - Stephen J Butler
- Department of Chemistry, Loughborough University, Epinal Way, Loughborough, LE11 3TU, U.K
| | - Hennie Valkenier
- Engineering of Molecular NanoSystems, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium
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Martínez‐Crespo L, Valkenier H. Transmembrane Transport of Bicarbonate by Anion Receptors. Chempluschem 2022; 87:e202200266. [PMID: 36414387 PMCID: PMC9827909 DOI: 10.1002/cplu.202200266] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Revised: 10/13/2022] [Indexed: 01/31/2023]
Abstract
The development of synthetic anion transporters is motivated by their potential application as treatment for diseases that originate from deficient anion transport by natural proteins. Transport of bicarbonate is important for crucial biological functions such as respiration and digestion. Despite this biological relevance, bicarbonate transport has not been as widely studied as chloride transport. Herein we present an overview of the synthetic receptors that have been studied as bicarbonate transporters, together with the different assays used to perform transport studies in large unilamellar vesicles. We highlight the most active transporters and comment on the nature of the functional groups present in active and inactive compounds. We also address recent mechanistic studies that have revealed different processes that can lead to net transport of bicarbonate, as well as studies reported in cells and tissues, and comment on the key challenges for the further development of bicarbonate transporters.
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Affiliation(s)
- Luis Martínez‐Crespo
- Department of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK,Manchester Institute of BiotechnologyUniversity of Manchester131 Princess StreetManchesterM1 7DNUK,Université Libre de Bruxelles (ULB) Engineering of Molecular NanoSystemsEcole polytechnique de BruxellesAvenue F.D. Roosevelt 50, CP165/64B-1050BrusselsBelgium
| | - Hennie Valkenier
- Université Libre de Bruxelles (ULB) Engineering of Molecular NanoSystemsEcole polytechnique de BruxellesAvenue F.D. Roosevelt 50, CP165/64B-1050BrusselsBelgium
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