1
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Silva Elipe MV, Ndukwe IE, Murray JI. Cryogen-free 400-MHz nuclear magnetic resonance spectrometer as a versatile tool for pharmaceutical process analytical technology. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2024; 62:512-534. [PMID: 38369696 DOI: 10.1002/mrc.5434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 01/15/2024] [Accepted: 01/16/2024] [Indexed: 02/20/2024]
Abstract
The discovery of new ceramic materials containing Ba-La-Cu oxides in 1986 that exhibited superconducting properties at high temperatures in the range of 35 K or higher, recognized with the Nobel Prize in Physics in 1987, opened a new world of opportunities for nuclear magnetic resonance (NMRs) and magnetic resonance imaging (MRIs) to move away from liquid cryogens. This discovery expands the application of high temperature superconducting (HTS) materials to fields beyond the chemical and medical industries, including electrical power grids, energy, and aerospace. The prototype 400-MHz cryofree HTS NMR spectrometer installed at Amgen's chemistry laboratory has been vital for a variety of applications such as structure analysis, reaction monitoring, and CASE-3D studies with RDCs. The spectrometer has been integrated with Amgen's chemistry and analytical workflows, providing pipeline project support in tandem with other Kinetic Analysis Platform technologies. The 400-MHz cryofree HTS NMR spectrometer, as the name implies, does not require liquid cryogens refills and has smaller footprint that facilitates installation into a chemistry laboratory fume hood, sharing the hood with a process chemistry reactor. Our evaluation of its performance for structural analysis with CASE-3D protocol and for reaction monitoring of Amgen's pipeline chemistry was successful. We envision that the HTS magnets would become part of the standard NMR and MRI spectrometers in the future. We believe that while the technology is being developed, there is room for all magnet options, including HTS, low temperature superconducting (LTS) magnets, and low field benchtop NMRs with permanent magnets, where utilization will be dependent on application type and costs.
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Affiliation(s)
| | - Ikenna Edward Ndukwe
- Department of Attribute Sciences, Process Development, Amgen Inc., Thousand Oaks, California, USA
| | - James I Murray
- Pivotal and Commercial Drug Substance Technologies, Process Development, Amgen Inc., Thousand Oaks, California, USA
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2
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Tipping MB, Pruñonosa Lara L, Solea AB, von Krbek LKS, Ward MD. Photoswitching of Co(ii)-based coordination cages containing azobenzene backbones. Chem Sci 2024; 15:8488-8499. [PMID: 38846406 PMCID: PMC11151815 DOI: 10.1039/d4sc01575d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Accepted: 05/02/2024] [Indexed: 06/09/2024] Open
Abstract
Inclusion of photoswitchable azobenzene units as spacers into ditopic bridging ligands Lm and Lp, containing two chelating pyrazolyl-pyridine termini, allows formation of metal complex assemblies with Co(ii) that undergo a range of light-induced structural transformations. One notable result is the light-induced conversion of a Co2(Lp)3 dinuclear triple helicate (based on the E ligand isomer) to a C 3-symmetric Co4(Lp)6 assembly, assumed to be an edge-bridged tetrahedral cage, based on the Z ligand isomer. Another is the preparation of a series of Co4(Lm)6 complexes, of which Co4(E-Lm)6 was crystallographically characterised and consists of a pair of Co2(Lm)2 double helicates connected by an additional two bridging ligands which span the pair of helicate units, giving a cyclic Co4 array in which one and then two bridging ligands alternate around the periphery. A set of Co4(Lm)6 complexes could be prepared containing different ratios of Z : E ligand isomers (0 : 6, 2 : 4, 4 : 2 and 6 : 0) of which Co4(Z-Lm)2(E-Lm)4 was particularly stable and dominated the speciation behaviour, either during light-induced switching of the ligand geometry in pre-formed complexes, or when ligand isomers were combined in different proportions during the preparation. These examples of (i) interconversion between Co2L3 (helicate) and (ii) Co4L6 (cage) assemblies with Lp, and the interconversion between a series of Co4L6 assemblies Co4(Z-Lm)n(E-Lm)6-n with Lm, constitute significant advances in the field of photoswitchable supramolecular assemblies.
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Affiliation(s)
- Max B Tipping
- Department of Chemistry, University of Warwick Coventry CV4 7AL UK
| | - Lidón Pruñonosa Lara
- Kekulé-Institut für Organische Chemie und Biochemie, Rheinische Friedrich-Wilhelms-Universität Bonn Gerhard-Domagk-Str. 1 53121 Bonn Germany
| | - Atena B Solea
- Department of Chemistry, University of Warwick Coventry CV4 7AL UK
| | - Larissa K S von Krbek
- Kekulé-Institut für Organische Chemie und Biochemie, Rheinische Friedrich-Wilhelms-Universität Bonn Gerhard-Domagk-Str. 1 53121 Bonn Germany
| | - Michael D Ward
- Department of Chemistry, University of Warwick Coventry CV4 7AL UK
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3
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Christensen M, Xu Y, Kwan EE, Di Maso MJ, Ji Y, Reibarkh M, Sun AC, Liaw A, Fier PS, Grosser S, Hein JE. Dynamic sampling in autonomous process optimization. Chem Sci 2024; 15:7160-7169. [PMID: 38756794 PMCID: PMC11095507 DOI: 10.1039/d3sc06884f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Accepted: 04/10/2024] [Indexed: 05/18/2024] Open
Abstract
Autonomous process optimization (APO) is a technology that has recently found utility in a multitude of process optimization challenges. In contrast to most APO examples in microflow reactor systems, we recently presented a system capable of optimization in high-throughput batch reactor systems. The drawback of APO in a high-throughput batch reactor system is the reliance on reaction sampling at a predetermined static timepoint rather than a dynamic endpoint. Static timepoint sampling can lead to the inconsistent capture of the process performance under each process parameter permutation. This is important because critical process behaviors such as rate acceleration accompanied by decomposition could be missed entirely. To address this drawback, we implemented a dynamic reaction endpoint determination strategy to capture the product purity once the process stream stabilized. We accomplished this through the incorporation of a real-time plateau detection algorithm into the APO workflow to measure and report the product purity at the dynamically determined reaction endpoint. We then applied this strategy to the autonomous optimization of a photobromination reaction towards the synthesis of a pharmaceutically relevant intermediate. In doing so, we not only uncovered process conditions to access the desired monohalogenation product in 85 UPLC area % purity with minimal decomposition risk, but also measured the effect of each parameter on the process performance. Our results highlight the advantage of incorporating dynamic sampling in APO workflows to drive optimization toward a stable and high-performing process.
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Affiliation(s)
- Melodie Christensen
- Department of Chemistry, University of British Columbia Vancouver British Columbia V6T 1Z1 Canada
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Yuting Xu
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Eugene E Kwan
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Michael J Di Maso
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Yining Ji
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Mikhail Reibarkh
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Alexandra C Sun
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Andy Liaw
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Patrick S Fier
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Shane Grosser
- Department of Process Research and Development, Merck & Co., Inc Rahway NJ 07065 USA
| | - Jason E Hein
- Department of Chemistry, University of British Columbia Vancouver British Columbia V6T 1Z1 Canada
- Acceleration Consortium, University of Toronto Toronto ON Canada
- Department of Chemistry, University of Bergen Bergen Norway
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4
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Herold D, Brauser M, Kind J, Thiele CM. Evolution of a Combined UV/Vis and NMR Setup with Fixed Pathlengths for Mass-limited Samples. Chemistry 2024; 30:e202304016. [PMID: 38360972 DOI: 10.1002/chem.202304016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Revised: 02/14/2024] [Accepted: 02/15/2024] [Indexed: 02/17/2024]
Abstract
The investigation of reaction mechanisms is a complex task that usually requires the use of several techniques. To obtain as much information as possible on the reaction and any intermediates - possibly invisible to one technique - the combination of techniques is a solution. In this work we present a new setup for combined UV/Vis and NMR spectroscopy and compare it to an established alternative. The presented approach allows a versatile usage of different commercially-available components like mirrors and fiber bundles as well as different fixed pathlengths according to double transmission or single transmission measurements. While a previous approach is based on a dip-probe setup for conventional NMR probes, the new one is based on a micro-Helmholtz coil array (LiquidVoxel™). This makes the use of rectangular cuvettes possible, which ensure well-defined pathlengths allowing for quantification of species. Additionally, very low quantities of compound can be analyzed due to the microfabrication and small cuvette size used. As proof-of-principle this new setup for combined UV/Vis and NMR spectroscopy is used to examine a well-studied photochromic system of the dithienylethene compound class. A thorough comparison of the pros and cons of the two setups for combined UV/Vis and NMR measurements is performed.
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Affiliation(s)
- Dominik Herold
- Technische Universität Darmstadt/Technical University of Darmstadt, Clemens-Schöpf-Institut für Organische Chemie und Biochemie/Clemens Schöpf Institute of Organic Chemistry and Biochemistry, Darmstadt, D-64289, Germany
| | - Matthias Brauser
- Technische Universität Darmstadt/Technical University of Darmstadt, Clemens-Schöpf-Institut für Organische Chemie und Biochemie/Clemens Schöpf Institute of Organic Chemistry and Biochemistry, Darmstadt, D-64289, Germany
| | - Jonas Kind
- Technische Universität Darmstadt/Technical University of Darmstadt, Clemens-Schöpf-Institut für Organische Chemie und Biochemie/Clemens Schöpf Institute of Organic Chemistry and Biochemistry, Darmstadt, D-64289, Germany
| | - Christina M Thiele
- Technische Universität Darmstadt/Technical University of Darmstadt, Clemens-Schöpf-Institut für Organische Chemie und Biochemie/Clemens Schöpf Institute of Organic Chemistry and Biochemistry, Darmstadt, D-64289, Germany
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5
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Caceres-Cortes J, Falk B, Mueller L, Dhar TGM. Perspectives on Nuclear Magnetic Resonance Spectroscopy in Drug Discovery Research. J Med Chem 2024; 67:1701-1733. [PMID: 38290426 DOI: 10.1021/acs.jmedchem.3c02389] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2024]
Abstract
The drug discovery landscape has undergone a significant transformation over the past decade, owing to research endeavors in a wide range of areas leading to strategies for pursuing new drug targets and the emergence of novel drug modalities. NMR spectroscopy has been a technology of fundamental importance to these research pursuits and has seen its use expanded both within and outside of traditional medicinal chemistry applications. In this perspective, we will present advancement of NMR-derived methods that have facilitated the characterization of small molecules and novel drug modalities including macrocyclic peptides, cyclic dinucleotides, and ligands for protein degradation. We will discuss innovations in NMR spectroscopy at the chemistry and biology interface that have broadened NMR's utility from hit identification through lead optimization activities. We will also discuss the promise of emerging NMR approaches in bridging our understanding and addressing challenges in the pursuit of the therapeutic agents of the future.
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Affiliation(s)
- Janet Caceres-Cortes
- Synthesis and Enabling Technologies, Small Molecule Drug Discovery, Bristol-Myers Squibb Company, Princeton, New Jersey 08540, United States
| | - Bradley Falk
- Synthesis and Enabling Technologies, Small Molecule Drug Discovery, Bristol-Myers Squibb Company, Princeton, New Jersey 08540, United States
| | - Luciano Mueller
- Synthesis and Enabling Technologies, Small Molecule Drug Discovery, Bristol-Myers Squibb Company, Princeton, New Jersey 08540, United States
| | - T G Murali Dhar
- Discovery Chemistry, Small Molecule Drug Discovery, Bristol-Myers Squibb Company, Princeton, New Jersey 085401, United States
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6
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Gu K, Yu C, Zhou W, Liu C. In Operando Visualization of Elementary Turnovers in Photocatalytic Organic Synthesis. J Phys Chem Lett 2024; 15:717-724. [PMID: 38214912 DOI: 10.1021/acs.jpclett.3c03109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2024]
Abstract
We report the in operando visualization of the photocatalytic turnovers on single eosin Y (EY) through a redox-induced photoblinking phenomenon. The photocatalytic cyclization of thiobenzamide (TB) catalyzed by EY was investigated. The analysis of the intensity-versus-time trajectories of single EYs revealed the kinetics and dynamics of the elementary photocatalytic turnovers and the heterogeneity of the activity of individual EYs. The quenching turnover time showed a fast population and a slow population, which could be attributed to the singlet and triplet states of photoexcited EY. The slow quenching turnovers were more dominant at higher TB concentrations. The activity heterogeneity of EYs was studied over a series of reactant concentrations. Excess quenching reagent was found to decrease the percentage of active EYs. The method can be broadly applied to studying the elementary processes of photocatalytic organic reactions in operando.
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Affiliation(s)
- Kai Gu
- School of Polymer Science and Polymer Engineering, University of Akron, Akron, Ohio 44325, United States
| | - Christina Yu
- Materials Science and Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Wenqiao Zhou
- School of Polymer Science and Polymer Engineering, University of Akron, Akron, Ohio 44325, United States
| | - Chunming Liu
- School of Polymer Science and Polymer Engineering, University of Akron, Akron, Ohio 44325, United States
- Department of Chemistry, University of Akron, Akron, Ohio 44325, United States
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7
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Swords WB, Lee H, Park Y, Llamas F, Skubi KL, Park J, Guzei IA, Baik MH, Yoon TP. Highly Enantioselective 6π Photoelectrocyclizations Engineered by Hydrogen Bonding. J Am Chem Soc 2023; 145:27045-27053. [PMID: 38049954 PMCID: PMC10842740 DOI: 10.1021/jacs.3c10782] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/06/2023]
Abstract
Photochemical electrocyclization reactions are valued for both their ability to produce structurally complex molecules and their central role in elucidating fundamental mechanistic principles of photochemistry. We present herein a highly enantioselective 6π photoelectrocyclization catalyzed by a chiral Ir(III) photosensitizer. This transformation was successfully realized by engineering a strong hydrogen-bonding interaction between a pyrazole moiety on the catalyst and a basic imidazolyl ketone on the substrate. To shed light on the origin of stereoinduction, we conducted a comprehensive investigation combining experimental and computational mechanistic studies. Results from density functional theory calculations underscore the crucial role played by the prochirality and the torquoselectivity in the electrocyclization process as well as the steric demand in the subsequent [1,4]-H shift step. Our findings not only offer valuable guidance for developing chiral photocatalysts but also serve as a significant reference for achieving high levels of enantioselectivity in the 6π photoelectrocyclization reaction.
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Affiliation(s)
- Wesley B Swords
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Hanna Lee
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea
| | - Yerin Park
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea
| | - Franco Llamas
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Kazimer L Skubi
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
- Department of Chemistry, Carleton College, Northfield, Minnesota 55057, United States
| | - Jiyong Park
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea
| | - Ilia A Guzei
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Mu-Hyun Baik
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea
| | - Tehshik P Yoon
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
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8
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Shiels OJ, Menti-Platten M, Bokosi FRB, Burns BR, Keaveney ST, Keller PA, Barker PJ, Trevitt AJ. A Photoreactor-Interfaced Mass Spectrometer: An Online Platform to Monitor Photochemical Reactions. Anal Chem 2023; 95:15472-15476. [PMID: 37830912 DOI: 10.1021/acs.analchem.3c03294] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2023]
Abstract
An experimental platform is reported that allows for the online characterization of photochemical reactions by coupling a continuous flow photoreactor, equipped with LED light irradiation and a dual-tipped ESI source, directly to a mass spectrometer with electrospray ionization. The capabilities of this platform are demonstrated with two classes of photoreactions: (1) the photopolymerization of methyl methacrylate and (2) photocatalyzed alkyne insertion into a 1,2,3-benzotriazinone. The online technique provides rapid information to inform the underlying photochemical mechanism and evaluate the overall photochemistry.
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Affiliation(s)
- Oisin J Shiels
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
| | - Maria Menti-Platten
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
| | - Fostino R B Bokosi
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
| | - Brett R Burns
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
| | - Sinead T Keaveney
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
| | - Paul A Keller
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
| | - Philip J Barker
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
| | - Adam J Trevitt
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong NSW 2522, Australia
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9
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LaPorte AJ, Feldner JE, Spies JC, Maher TJ, Burke MD. MIDA- and TIDA-Boronates Stabilize α-Radicals Through B-N Hyperconjugation. Angew Chem Int Ed Engl 2023; 62:e202309566. [PMID: 37540542 DOI: 10.1002/anie.202309566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Revised: 08/03/2023] [Accepted: 08/04/2023] [Indexed: 08/05/2023]
Abstract
Multifunctional organoboron compounds increasingly enable the simple generation of complex, Csp3 -rich small molecules. The ability of boron-containing functional groups to modify the reactivity of α-radicals has also enabled a myriad of chemical reactions. Boronic esters with vacant p-orbitals have a significant stabilizing effect on α-radicals due to delocalization of spin density into the empty orbital. The effect of coordinatively saturated derivatives, such as N-methyliminodiacetic acid (MIDA) boronates and counterparts, remains less clear. Herein, we demonstrate that coordinatively saturated MIDA and TIDA boronates stabilize secondary alkyl α-radicals via σB-N hyperconjugation in a manner that allows site-selective C-H bromination. DFT calculated radical stabilization energies and spin density maps as well as LED NMR kinetic analysis of photochemical bromination rates of different boronic esters further these findings. This work clarifies that the α-radical stabilizing effect of boronic esters does not only proceed via delocalization of radical character into vacant boron p-orbitals, but that hyperconjugation of tetrahedral boron-containing functional groups and their ligand electron delocalizing ability also play a critical role. These findings establish boron ligands as a useful dial for tuning reactivity at the α-carbon.
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Affiliation(s)
- Antonio J LaPorte
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Jack E Feldner
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Jan C Spies
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Tom J Maher
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Martin D Burke
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
- Carle Illinois College of Medicine, University of Illinois, Urbana, IL, 61820, USA
- Department of Biochemistry, University of Illinois, Urbana, IL, 61820, USA
- Arnold and Mable Beckman Institute, University of Illinois, Urbana, IL, 61820, USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, IL, 61820, USA
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10
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Cheng QY, Wang T, Hu J, Chen HY, Xu JJ. In Situ Probing the Short-Lived Intermediates in Visible-Light Heterogeneous Photocatalysis by Mass Spectrometry. Anal Chem 2023; 95:14150-14157. [PMID: 37665645 DOI: 10.1021/acs.analchem.3c03494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/06/2023]
Abstract
Visible-light-mediated heterogeneous photocatalysis has recently emerged as an environmentally friendly and energy-sustainable alternative for organic transformations. Despite the advancements in developing wide varieties of photocatalysts during the past decades, the accurate probing and identification of the photogenerated species, especially the short-lived radical intermediates, are still challenging. In this work, we reported a hybrid ion emitter that integrated with a pico-liter heterogeneous photocatalytic reactor, which was fabricated by depositing the photocatalyst (e.g., TiO2) into the front tip of a quartz micropipette. Benefited from the dual-function feature of the hybrid micropipette (i.e., a clog-free tip-confined pico-liter reactor for heterogeneous photocatalysis and an ion emitter for nanoelectrospray ionization), sensitized photoredox reactions at the catalyst-solution interface can be triggered upon visible-light irradiation using a cheap LED laser (453 nm), and the newly produced transient radical intermediates can be rapidly transformed into gaseous ions for mass spectrometric identification. Using this novel low-delay coupling device, photogenerated intermediates, including the cationic radicals produced during the photooxidation of anilines and the anionic radicals produced during the photoreduction of quinones, were successfully captured by mass spectrometry. We believe that our hybrid photochemical microreactor/ion emitter has provided a new and powerful tool for exploring the complicated heterogeneous photochemical processes, especially their ultrafast initial transformations.
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Affiliation(s)
- Qiu-Yue Cheng
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
| | - Ting Wang
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
| | - Jun Hu
- School of Life Sciences and Health Engineering, Jiangnan University, Wuxi 214122, P. R. China
| | - Hong-Yuan Chen
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
| | - Jing-Juan Xu
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
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11
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Hirschmann M, Soltwedel O, Ritzert P, von Klitzing R, Thiele CM. Light-Controlled Lyotropic Liquid Crystallinity of Polyaspartates Exploited as Photo-Switchable Alignment Medium. J Am Chem Soc 2023; 145:3615-3623. [PMID: 36749116 DOI: 10.1021/jacs.2c12760] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Two polyaspartates bearing ortho-fluorinated azobenzenes (pFAB) as photo-responsive groups in the side chain were synthesized: PpFABLA (1) and co-polyaspartate PpFABLA-co-PBLA [11, 75%(n/n) PpFABLA content]. As a consequence of the E/Z-isomerization of the side chain, PpFABLA (1) undergoes a visible-light-induced reversible coil-helix transition in solution: Green light (525 nm) affords the coil, and violet light (400 nm) affords the helix. pFAB significantly increases the thermal stability of the Z-isomer at 20 °C (t1/2 = 66 d for the Z-isomer) and effectively counters the favored back formation of the helix. At 20%(w/w) polymer concentration, the helical polymer forms a lyotropic liquid crystal (LLC) that further orients unidirectionally inside a magnetic field, while the coil polymer results in an isotropic solution. The high viscosity of the polymer solution stabilizes the coexistence of liquid crystalline and isotropic domains, which were obtained with spatial control by partial light irradiation. When used as an alignment medium, PpFABLA (1) enables (i) the measurement of dipolar couplings without the need for a separate isotropic reference and (ii) the differentiation of enantiomers. PpFABLA-co-PBLA (11) preserves the helical structure, by intention, independently of the E/Z-isomerization of the side chain: Both photo-isomers of PpFABLA-co-PBLA (11) form a helix that─at a concentration of 16%(w/w)─form an LLC. Despite the absence of a change in the secondary structure, the E/Z-isomerization of the side chain changes the morphology of the liquid crystal and leads to different sets of dipolar coupling for the same probe molecule.
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Affiliation(s)
- Max Hirschmann
- Clemens-Schöpf-Institute, Technical University of Darmstadt (TUDa), Alarich-Weiss-Straße 4, DE 64287 Darmstadt, Germany
| | - Olaf Soltwedel
- Institute for Condensed Matter Physics, Technical University of Darmstadt (TUDa), Hochschulstraße 8, DE 64289 Darmstadt, Germany
| | - Philipp Ritzert
- Institute for Condensed Matter Physics, Technical University of Darmstadt (TUDa), Hochschulstraße 8, DE 64289 Darmstadt, Germany
| | - Regine von Klitzing
- Institute for Condensed Matter Physics, Technical University of Darmstadt (TUDa), Hochschulstraße 8, DE 64289 Darmstadt, Germany
| | - Christina M Thiele
- Clemens-Schöpf-Institute, Technical University of Darmstadt (TUDa), Alarich-Weiss-Straße 4, DE 64287 Darmstadt, Germany
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12
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Eills J, Budker D, Cavagnero S, Chekmenev EY, Elliott SJ, Jannin S, Lesage A, Matysik J, Meersmann T, Prisner T, Reimer JA, Yang H, Koptyug IV. Spin Hyperpolarization in Modern Magnetic Resonance. Chem Rev 2023; 123:1417-1551. [PMID: 36701528 PMCID: PMC9951229 DOI: 10.1021/acs.chemrev.2c00534] [Citation(s) in RCA: 62] [Impact Index Per Article: 62.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Magnetic resonance techniques are successfully utilized in a broad range of scientific disciplines and in various practical applications, with medical magnetic resonance imaging being the most widely known example. Currently, both fundamental and applied magnetic resonance are enjoying a major boost owing to the rapidly developing field of spin hyperpolarization. Hyperpolarization techniques are able to enhance signal intensities in magnetic resonance by several orders of magnitude, and thus to largely overcome its major disadvantage of relatively low sensitivity. This provides new impetus for existing applications of magnetic resonance and opens the gates to exciting new possibilities. In this review, we provide a unified picture of the many methods and techniques that fall under the umbrella term "hyperpolarization" but are currently seldom perceived as integral parts of the same field. Specifically, before delving into the individual techniques, we provide a detailed analysis of the underlying principles of spin hyperpolarization. We attempt to uncover and classify the origins of hyperpolarization, to establish its sources and the specific mechanisms that enable the flow of polarization from a source to the target spins. We then give a more detailed analysis of individual hyperpolarization techniques: the mechanisms by which they work, fundamental and technical requirements, characteristic applications, unresolved issues, and possible future directions. We are seeing a continuous growth of activity in the field of spin hyperpolarization, and we expect the field to flourish as new and improved hyperpolarization techniques are implemented. Some key areas for development are in prolonging polarization lifetimes, making hyperpolarization techniques more generally applicable to chemical/biological systems, reducing the technical and equipment requirements, and creating more efficient excitation and detection schemes. We hope this review will facilitate the sharing of knowledge between subfields within the broad topic of hyperpolarization, to help overcome existing challenges in magnetic resonance and enable novel applications.
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Affiliation(s)
- James Eills
- Institute
for Bioengineering of Catalonia, Barcelona
Institute of Science and Technology, 08028Barcelona, Spain,
| | - Dmitry Budker
- Johannes
Gutenberg-Universität Mainz, 55128Mainz, Germany,Helmholtz-Institut,
GSI Helmholtzzentrum für Schwerionenforschung, 55128Mainz, Germany,Department
of Physics, UC Berkeley, Berkeley, California94720, United States
| | - Silvia Cavagnero
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Eduard Y. Chekmenev
- Department
of Chemistry, Integrative Biosciences (IBio), Karmanos Cancer Institute
(KCI), Wayne State University, Detroit, Michigan48202, United States,Russian
Academy of Sciences, Moscow119991, Russia
| | - Stuart J. Elliott
- Molecular
Sciences Research Hub, Imperial College
London, LondonW12 0BZ, United Kingdom
| | - Sami Jannin
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Anne Lesage
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Jörg Matysik
- Institut
für Analytische Chemie, Universität
Leipzig, Linnéstr. 3, 04103Leipzig, Germany
| | - Thomas Meersmann
- Sir
Peter Mansfield Imaging Centre, University Park, School of Medicine, University of Nottingham, NottinghamNG7 2RD, United Kingdom
| | - Thomas Prisner
- Institute
of Physical and Theoretical Chemistry and Center of Biomolecular Magnetic
Resonance, Goethe University Frankfurt, , 60438Frankfurt
am Main, Germany
| | - Jeffrey A. Reimer
- Department
of Chemical and Biomolecular Engineering, UC Berkeley, and Materials Science Division, Lawrence Berkeley National
Laboratory, Berkeley, California94720, United States
| | - Hanming Yang
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Igor V. Koptyug
- International Tomography Center, Siberian
Branch of the Russian Academy
of Sciences, 630090Novosibirsk, Russia,
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13
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Pecourneau J, Losantos R, Gansmuller A, Parant S, Bernhard Y, Mourer M, Monari A, Pasc A. Tuning the competition between photoisomerization and photothermy in biomimetic cyclocurcumin analogues. J Photochem Photobiol A Chem 2023. [DOI: 10.1016/j.jphotochem.2023.114583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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14
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Ruck RT, Strotman NA, Krska SW. The Catalysis Laboratory at Merck: 20 Years of Catalyzing Innovation. ACS Catal 2022. [DOI: 10.1021/acscatal.2c05159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Rebecca T. Ruck
- Department of Process Research & Development, Merck & Co., Inc., Rahway, New Jersey07065, United States
| | - Neil A. Strotman
- Department of Pharmaceutical Sciences & Clinical Supplies, Merck & Co., Inc., Rahway, New Jersey07065, United States
| | - Shane W. Krska
- Chemistry Capabilities Accelerating Therapeutics, Merck & Co., Inc., Kenilworth, New Jersey07033, United States
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15
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Swords WB, Chapman SJ, Hofstetter H, Dunn AL, Yoon TP. Variable Temperature LED-NMR: Rapid Insights into a Photocatalytic Mechanism from Reaction Progress Kinetic Analysis. J Org Chem 2022; 87:11776-11782. [PMID: 35969669 DOI: 10.1021/acs.joc.2c01479] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A multitude of techniques are available to obtain a useful understanding of photocatalytic mechanisms. The combination of LED illumination with nuclear magnetic resonance spectroscopy (LED-NMR) provides a rapid, convenient means to directly monitor a photocatalytic reaction in situ. Herein, we describe a study of the mechanism of an enantioselective intermolecular [2 + 2] photocycloaddition catalyzed by a chiral Ir photocatalyst using LED-NMR. The data-rich output of this experiment is suitable for same-excess and variable time normalization analyses (VTNA). Together, these identified an unexpected change in mechanism between reactions conducted at ambient and cryogenic temperatures. At -78 °C, the kinetic data are consistent with the triplet rebound mechanism we previously proposed for this reaction, involving sensitization of maleimide and rapid reaction with a hydrogen-bound quinoline within the solvent cage. At room temperature, the cycloaddition instead proceeds through intracomplex energy transfer to the hydrogen-bound quinolone. These results highlight the potential sensitivity of photocatalytic reaction mechanisms to the precise reaction conditions and the further utility of LED-NMR as a fast, data-rich tool for their interrogation that compares favorably to conventional ex situ kinetic analyses.
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Affiliation(s)
- Wesley B Swords
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin53703, United States
| | - Steven J Chapman
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin53703, United States
| | - Heike Hofstetter
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin53703, United States
| | - Anna L Dunn
- Drug Product Development, GlaxoSmithKline, Upper Providence, Pennsylvania19426, United States
| | - Tehshik P Yoon
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin53703, United States
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16
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Sample illumination device facilitates in situ light-coupled NMR spectroscopy without fibre optics. Commun Chem 2022; 5:90. [PMID: 36697806 PMCID: PMC9814378 DOI: 10.1038/s42004-022-00704-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Accepted: 07/13/2022] [Indexed: 01/28/2023] Open
Abstract
In situ illumination of liquid-state nuclear magnetic resonance (NMR) samples makes it possible for a wide range of light-dependent chemical and biological phenomena to be studied by the powerful analytical technique. However, the position of an NMR sample deep within the bore of the spectrometer magnet renders such illumination challenging. Here, we demonstrate the working principles of a sample illumination device (NMRtorch) where a lighthead containing an LED array is positioned directly at the top of an NMRtorch tube which is inserted into the NMR spectrometer. The wall of the tube itself acts as a light guide, illuminating the sample from the outside. We explore how this new setup performs in a number of photo-NMR applications, including photoisomerisation and photo-chemically induced dynamic nuclear polarisation (photo-CIDNP), and demonstrate the potential for ultraviolet (UV) degradation studies with continuous online NMR assessment. This setup enables users of any typical liquid-state spectrometer to easily perform in situ photo-NMR experiments, using a wide range of wavelengths.
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17
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Substrate Photoswitching for Rate Enhancement of an Organocatalytic Cyclization Reaction. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200048] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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18
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Ben-Tal Y, Boaler PJ, Dale HJA, Dooley RE, Fohn NA, Gao Y, García-Domínguez A, Grant KM, Hall AMR, Hayes HLD, Kucharski MM, Wei R, Lloyd-Jones GC. Mechanistic analysis by NMR spectroscopy: A users guide. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2022; 129:28-106. [PMID: 35292133 DOI: 10.1016/j.pnmrs.2022.01.001] [Citation(s) in RCA: 27] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 01/05/2022] [Accepted: 01/06/2022] [Indexed: 06/14/2023]
Abstract
A 'principles and practice' tutorial-style review of the application of solution-phase NMR in the analysis of the mechanisms of homogeneous organic and organometallic reactions and processes. This review of 345 references summarises why solution-phase NMR spectroscopy is uniquely effective in such studies, allowing non-destructive, quantitative analysis of a wide range of nuclei common to organic and organometallic reactions, providing exquisite structural detail, and using instrumentation that is routinely available in most chemistry research facilities. The review is in two parts. The first comprises an introduction to general techniques and equipment, and guidelines for their selection and application. Topics include practical aspects of the reaction itself, reaction monitoring techniques, NMR data acquisition and processing, analysis of temporal concentration data, NMR titrations, DOSY, and the use of isotopes. The second part comprises a series of 15 Case Studies, each selected to illustrate specific techniques and approaches discussed in the first part, including in situ NMR (1/2H, 10/11B, 13C, 15N, 19F, 29Si, 31P), kinetic and equilibrium isotope effects, isotope entrainment, isotope shifts, isotopes at natural abundance, scalar coupling, kinetic analysis (VTNA, RPKA, simulation, steady-state), stopped-flow NMR, flow NMR, rapid injection NMR, pure shift NMR, dynamic nuclear polarisation, 1H/19F DOSY NMR, and in situ illumination NMR.
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Affiliation(s)
- Yael Ben-Tal
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Patrick J Boaler
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Harvey J A Dale
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Ruth E Dooley
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom; Evotec (UK) Ltd, 114 Innovation Drive, Milton Park, Abingdon, Oxfordshire OX14 4RZ, United Kingdom
| | - Nicole A Fohn
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Yuan Gao
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Andrés García-Domínguez
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Katie M Grant
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Andrew M R Hall
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Hannah L D Hayes
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Maciej M Kucharski
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Ran Wei
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
| | - Guy C Lloyd-Jones
- School of Chemistry, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom.
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19
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Fillbrook LL, Nothling MD, Stenzel MH, Price WS, Beves JE. Rapid Online Analysis of Photopolymerization Kinetics and Molecular Weight Using Diffusion NMR. ACS Macro Lett 2022; 11:166-172. [PMID: 35574764 DOI: 10.1021/acsmacrolett.1c00719] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Online, high-throughput molecular weight analysis of polymerizations is rare, with most studies relying on tedious sampling techniques and batchwise postanalysis. The ability to track both monomer conversion and molecular weight evolution in real time could underpin precision polymer development and facilitate study of rapid polymerization reactions. Here, we use a single time-resolved diffusion nuclear magnetic resonance (NMR) experiment to simultaneously study the kinetics and molecular weight evolution during a photopolymerization, with in situ irradiation inside the NMR instrument. As a model system, we used a photoinduced electron transfer reversible addition-fragmentation chain transfer (PET-RAFT) polymerization. The data allow diffusion coefficients and intensities to be calculated every 14 s from which the polymer size and monomer conversion can be extracted. Key to this approach is (1) the use of shuffled gradient amplitudes in the diffusion NMR experiment to access reactions of any rate, (2) the addition of a relaxation agent to increase achievable time resolution and, (3) a sliding correction that accounts for viscosity changes during polymerization. Diffusion NMR offers a uniquely simple, translatable handle for online monitoring of polymerization reactions.
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Affiliation(s)
| | | | | | - William S. Price
- Nanoscale Group, School of Science, Western Sydney University, Penrith, NSW 2751, Australia
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20
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Quasdorf K, Murray JI, Nguyen H, Silva Elipe MV, Ericson A, Kircher E, Guan L, Caille S. Development of a Continuous Photochemical Bromination/Alkylation Sequence En Route to AMG 423. Org Process Res Dev 2022. [DOI: 10.1021/acs.oprd.1c00469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Kyle Quasdorf
- Pivotal and Commercial Drug Substance Technologies, Process Development, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
| | - James I. Murray
- Pivotal and Commercial Drug Substance Technologies, Process Development, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
| | - Hanh Nguyen
- Pivotal and Commercial Drug Substance Technologies, Process Development, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
| | - Maria V. Silva Elipe
- Attribute Sciences Department, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
| | - Ari Ericson
- Pivotal and Commercial Drug Substance Technologies, Process Development, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
| | - Eric Kircher
- Attribute Sciences Department, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
| | - Lianxiu Guan
- Attribute Sciences Department, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
| | - Seb Caille
- Pivotal and Commercial Drug Substance Technologies, Process Development, Amgen Inc., One Amgen Center Drive, Thousand Oaks, California 91320, United States
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21
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Tay NES, Lehnherr D, Rovis T. Photons or Electrons? A Critical Comparison of Electrochemistry and Photoredox Catalysis for Organic Synthesis. Chem Rev 2022; 122:2487-2649. [PMID: 34751568 PMCID: PMC10021920 DOI: 10.1021/acs.chemrev.1c00384] [Citation(s) in RCA: 123] [Impact Index Per Article: 61.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Redox processes are at the heart of synthetic methods that rely on either electrochemistry or photoredox catalysis, but how do electrochemistry and photoredox catalysis compare? Both approaches provide access to high energy intermediates (e.g., radicals) that enable bond formations not constrained by the rules of ionic or 2 electron (e) mechanisms. Instead, they enable 1e mechanisms capable of bypassing electronic or steric limitations and protecting group requirements, thus enabling synthetic chemists to disconnect molecules in new and different ways. However, while providing access to similar intermediates, electrochemistry and photoredox catalysis differ in several physical chemistry principles. Understanding those differences can be key to designing new transformations and forging new bond disconnections. This review aims to highlight these differences and similarities between electrochemistry and photoredox catalysis by comparing their underlying physical chemistry principles and describing their impact on electrochemical and photochemical methods.
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Affiliation(s)
- Nicholas E S Tay
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Dan Lehnherr
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Tomislav Rovis
- Department of Chemistry, Columbia University, New York, New York 10027, United States
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22
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Wilcken R, Gerwien A, Huber LA, Dube H, Riedle E. Quantitative
In‐Situ
NMR Illumination for Excitation and Kinetic Analysis of Molecular Motor Intermediates. CHEMPHOTOCHEM 2022. [DOI: 10.1002/cptc.202100232] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Roland Wilcken
- Lehrstuhl für BioMolekulare Optik Ludwig-Maximilians-Universität München Oettingenstr. 67 80538 München Germany
- Chair of Organic Chemistry I Friedrich-Alexander-Universität Erlangen-Nürnberg Department of Chemistry and Pharmacy Nikolaus-Fiebiger-Str. 10 91058 Erlangen Germany
| | - Aaron Gerwien
- Department Chemie Ludwig-Maximilians-Universität München Butenandtstr. 5–13 (Haus F) 81377 München Germany
| | - Ludwig Alexander Huber
- Department Chemie Ludwig-Maximilians-Universität München Butenandtstr. 5–13 (Haus F) 81377 München Germany
| | - Henry Dube
- Department Chemie Ludwig-Maximilians-Universität München Butenandtstr. 5–13 (Haus F) 81377 München Germany
- Chair of Organic Chemistry I Friedrich-Alexander-Universität Erlangen-Nürnberg Department of Chemistry and Pharmacy Nikolaus-Fiebiger-Str. 10 91058 Erlangen Germany
| | - Eberhard Riedle
- Lehrstuhl für BioMolekulare Optik Ludwig-Maximilians-Universität München Oettingenstr. 67 80538 München Germany
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23
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Bramham JE, Zalar M, Golovanov AP. Controlled release and characterisation of photocaged molecules using in situ LED illumination in solution NMR spectroscopy. Chem Commun (Camb) 2022; 58:11973-11976. [DOI: 10.1039/d2cc04731d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We demonstrate that photo-uncaging reactions triggered by LED illumination can be conveniently monitored in situ by solution NMR, offering new ways to characterise and optimise photocages.
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Affiliation(s)
- Jack E. Bramham
- Department of Chemistry, School of Natural Sciences, Faculty of Science and Engineering, The University of Manchester, Manchester, M13 9PL, UK
| | - Matja Zalar
- Department of Chemical Engineering, School of Natural Sciences, Faculty of Science and Engineering, The University of Manchester, Manchester, M13 9PL, UK
| | - Alexander P. Golovanov
- Department of Chemistry, School of Natural Sciences, Faculty of Science and Engineering, The University of Manchester, Manchester, M13 9PL, UK
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24
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Pietrzak M, Jopa S, Mames A, Urbańczyk M, Woźny M, Ratajczyk T. Recent Progress in Liquid State Electrochemistry Coupled with NMR Spectroscopy. ChemElectroChem 2021. [DOI: 10.1002/celc.202100724] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Mariusz Pietrzak
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44/52 01-224 Warsaw Poland
| | - Sylwia Jopa
- Faculty of Chemistry University of Warsaw Pasteura 1 02-093 Warsaw Poland
| | - Adam Mames
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44/52 01-224 Warsaw Poland
| | - Mateusz Urbańczyk
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44/52 01-224 Warsaw Poland
- Centre of New Technologies University of Warsaw Banacha 2 C 02-097 Warsaw Poland
| | - Mateusz Woźny
- Institute of Organic Chemistry Polish Academy of Sciences Kasprzaka 44/52 01-224 Warsaw Poland
| | - Tomasz Ratajczyk
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44/52 01-224 Warsaw Poland
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25
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Bottecchia C, Lévesque F, McMullen JP, Ji Y, Reibarkh M, Peng F, Tan L, Spencer G, Nappi J, Lehnherr D, Narsimhan K, Wismer MK, Chen L, Lin Y, Dalby SM. Manufacturing Process Development for Belzutifan, Part 2: A Continuous Flow Visible-Light-Induced Benzylic Bromination. Org Process Res Dev 2021. [DOI: 10.1021/acs.oprd.1c00240] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Cecilia Bottecchia
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - François Lévesque
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Jonathan P. McMullen
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Yining Ji
- Analytical Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Mikhail Reibarkh
- Analytical Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Feng Peng
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Lushi Tan
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Glenn Spencer
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Jarod Nappi
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Dan Lehnherr
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Karthik Narsimhan
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Michael K. Wismer
- Scientific Engineering & Design, Merck & Co., Inc., Kenilworth, New Jersey 07033, United States
| | - Like Chen
- Shanghai SynTheAll Pharmaceutical Co. Ltd., 9 Yuegong Road, Jinshan District, Shanghai 201507, China
| | - Yipeng Lin
- Shanghai SynTheAll Pharmaceutical Co. Ltd., 9 Yuegong Road, Jinshan District, Shanghai 201507, China
| | - Stephen M. Dalby
- Process Research & Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
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26
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Askey H, Grayson JD, Tibbetts JD, Turner-Dore JC, Holmes JM, Kociok-Kohn G, Wrigley GL, Cresswell AJ. Photocatalytic Hydroaminoalkylation of Styrenes with Unprotected Primary Alkylamines. J Am Chem Soc 2021; 143:15936-15945. [PMID: 34543004 PMCID: PMC8499025 DOI: 10.1021/jacs.1c07401] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Indexed: 12/27/2022]
Abstract
Catalytic, intermolecular hydroaminoalkylation (HAA) of styrenes provides a powerful disconnection for pharmacologically relevant γ-arylamines, but current methods cannot utilize unprotected primary alkylamines as feedstocks. Metal-catalyzed HAA protocols are also highly sensitive to α-substitution on the amine partner, and no catalytic solutions exist for α-tertiary γ-arylamine synthesis via this approach. We report a solution to these problems using organophotoredox catalysis, enabling a direct, modular, and sustainable preparation of α-(di)substituted γ-arylamines, including challenging electron-neutral and moderately electron-rich aryl groups. A broad range of functionalities are tolerated, and the reactions can be run on multigram scale in continuous flow. The method is applied to a concise, protecting-group-free synthesis of the blockbuster drug Fingolimod, as well as a phosphonate mimic of its in vivo active form (by iterative α-C-H functionalization of ethanolamine). The reaction can also be sequenced with an intramolecular N-arylation to provide a general and modular access to valuable (spirocyclic) 1,2,3,4-tetrahydroquinolines and 1,2,3,4-tetrahydronaphthyridines. Mechanistic and kinetic studies support an irreversible hydrogen atom transfer activation of the alkylamine by the azidyl radical and some contribution from a radical chain. The reaction is photon-limited and exhibits a zero-order dependence on amine, azide, and photocatalyst, with a first-order dependence on styrene.
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Affiliation(s)
- Hannah
E. Askey
- Department
of Chemistry, University of Bath, Claverton Down, Bath BA2 7AY, U.K.
| | - James D. Grayson
- Department
of Chemistry, University of Bath, Claverton Down, Bath BA2 7AY, U.K.
| | - Joshua D. Tibbetts
- Department
of Chemistry, University of Bath, Claverton Down, Bath BA2 7AY, U.K.
| | | | - Jake M. Holmes
- Department
of Chemistry, University of Bath, Claverton Down, Bath BA2 7AY, U.K.
| | - Gabriele Kociok-Kohn
- Materials
and Chemical Characterisation Facility (MC), University of Bath, Claverton Down, Bath BA2 7AY, U.K.
| | - Gail L. Wrigley
- Oncology
R&D, Research & Early Development, AstraZeneca, Darwin Building, 310, Cambridge Science Park, Milton Road, Cambridge CB4 0WG, U.K.
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27
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Ji Y, Bottecchia C, Lévesque F, Narsimhan K, Lehnherr D, McMullen JP, Dalby SM, Xiao KJ, Reibarkh M. Benzylic Photobromination for the Synthesis of Belzutifan: Elucidation of Reaction Mechanisms Using In Situ LED-NMR. J Org Chem 2021; 87:2055-2062. [PMID: 34590859 DOI: 10.1021/acs.joc.1c01465] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A detailed mechanistic understanding of a benzylic photobromination en route to belzutifan (MK-6482, a small molecule for the treatment of renal cell carcinoma associated with von Hippel-Lindau syndrome) has been achieved using in situ LED-NMR spectroscopy in conjunction with kinetic analysis. Two distinct mechanisms of overbromination, namely, the ionic and radical pathways, have been revealed by this study. The behavior of the major reaction species, including reactants, intermediates, products, and side products, has been elucidated. Comprehensive understanding of both pathways informed and enabled mitigation of a major process risk: a sudden product decomposition. Detailed knowledge of the processes occurring during the reaction and their potential liabilities enabled the development of a robust photochemical continuous flow process implemented for commercial manufacturing.
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Affiliation(s)
- Yining Ji
- Analytical Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Cecilia Bottecchia
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - François Lévesque
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Karthik Narsimhan
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Dan Lehnherr
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Jonathan P McMullen
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Stephen M Dalby
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Kai-Jiong Xiao
- Process Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Mikhail Reibarkh
- Analytical Research and Development, Merck & Co., Inc., Rahway, New Jersey 07065, United States
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28
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Candish L, Collins KD, Cook GC, Douglas JJ, Gómez-Suárez A, Jolit A, Keess S. Photocatalysis in the Life Science Industry. Chem Rev 2021; 122:2907-2980. [PMID: 34558888 DOI: 10.1021/acs.chemrev.1c00416] [Citation(s) in RCA: 95] [Impact Index Per Article: 31.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
In the pursuit of new pharmaceuticals and agrochemicals, chemists in the life science industry require access to mild and robust synthetic methodologies to systematically modify chemical structures, explore novel chemical space, and enable efficient synthesis. In this context, photocatalysis has emerged as a powerful technology for the synthesis of complex and often highly functionalized molecules. This Review aims to summarize the published contributions to the field from the life science industry, including research from industrial-academic partnerships. An overview of the synthetic methodologies developed and strategic applications in chemical synthesis, including peptide functionalization, isotope labeling, and both DNA-encoded and traditional library synthesis, is provided, along with a summary of the state-of-the-art in photoreactor technology and the effective upscaling of photocatalytic reactions.
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Affiliation(s)
- Lisa Candish
- Drug Discovery Sciences, Pharmaceuticals, Bayer AG, 42113 Wuppertal, Germany
| | - Karl D Collins
- Bayer Foundation, Public Affairs, Science and Sustainability, Bayer AG, 51368 Leverkusen, Germany
| | - Gemma C Cook
- Discovery High-Throughput Chemistry, Medicinal Science and Technology, GlaxoSmithKline, Stevenage SG1 2NY, U.K
| | - James J Douglas
- Early Chemical Development, Pharmaceutical Sciences, R&D, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Adrián Gómez-Suárez
- Organic Chemistry, Bergische Universität Wuppertal, 42119 Wuppertal, Germany
| | - Anais Jolit
- Medicinal Chemistry Department, Neuroscience Discovery Research, AbbVie Deutschland GmbH & Co. KG, 67061 Ludwigshafen, Germany
| | - Sebastian Keess
- Medicinal Chemistry Department, Neuroscience Discovery Research, AbbVie Deutschland GmbH & Co. KG, 67061 Ludwigshafen, Germany
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29
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Gomez MV, Ruiz-Castañeda M, Nitschke P, Gschwind RM, Jiménez MA. Insights Into the Micelle-Induced β-Hairpin-to-α-Helix Transition of a LytA-Derived Peptide by Photo-CIDNP Spectroscopy. Int J Mol Sci 2021; 22:ijms22136666. [PMID: 34206372 PMCID: PMC8268221 DOI: 10.3390/ijms22136666] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 06/07/2021] [Accepted: 06/16/2021] [Indexed: 11/16/2022] Open
Abstract
A choline-binding module from pneumococcal LytA autolysin, LytA239–252, was reported to have a highly stable nativelike β-hairpin in aqueous solution, which turns into a stable amphipathic α-helix in the presence of micelles. Here, we aim to obtain insights into this DPC-micelle triggered β-hairpin-to-α-helix conformational transition using photo-CIDNP NMR experiments. Our results illustrate the dependency between photo-CIDNP phenomena and the light intensity in the sample volume, showing that the use of smaller-diameter (2.5 mm) NMR tubes instead of the conventional 5 mm ones enables more efficient illumination for our laser-diode light setup. Photo-CIDNP experiments reveal different solvent accessibility for the two tyrosine residues, Y249 and Y250, the latter being less accessible to the solvent. The cross-polarization effects of these two tyrosine residues of LytA239–252 allow for deeper insights and evidence their different behavior, showing that the Y250 aromatic side chain is involved in a stronger interaction with DPC micelles than Y249 is. These results can be interpreted in terms of the DPC micelle disrupting the aromatic stacking between W241 and Y250 present in the nativelike β-hairpin, hence initiating conversion towards the α-helix structure. Our photo-CIDNP methodology represents a powerful tool for observing residue-level information in switch peptides that is difficult to obtain by other spectroscopic techniques.
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Affiliation(s)
- M. Victoria Gomez
- IRICA, Department of Inorganic, Organic and Biochemistry, Faculty of Chemical Sciences and Technologies, Universidad de Castilla-La Mancha (UCLM), Av. Camilo José Cela 10, 13071 Ciudad Real, Spain;
- Correspondence: (M.V.G.); (M.A.J.)
| | - Margarita Ruiz-Castañeda
- IRICA, Department of Inorganic, Organic and Biochemistry, Faculty of Chemical Sciences and Technologies, Universidad de Castilla-La Mancha (UCLM), Av. Camilo José Cela 10, 13071 Ciudad Real, Spain;
| | - Philipp Nitschke
- Institute of Organic Chemistry, University of Regensburg, Universitätsstraße 31, 93053 Regensburg, Germany; (P.N.); (R.M.G.)
| | - Ruth M. Gschwind
- Institute of Organic Chemistry, University of Regensburg, Universitätsstraße 31, 93053 Regensburg, Germany; (P.N.); (R.M.G.)
| | - M. Angeles Jiménez
- Departamento de Química-Física Biológica, Instituto de Química Física Rocasolano (IQFR-CSIC), Serrano 119, 28006 Madrid, Spain
- Correspondence: (M.V.G.); (M.A.J.)
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30
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Paululat T, Rabe M, Berdnikova DV. Modification of an NMR probe for monitoring of photoreactions. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2021; 327:106990. [PMID: 33932912 DOI: 10.1016/j.jmr.2021.106990] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Revised: 04/13/2021] [Accepted: 04/15/2021] [Indexed: 06/12/2023]
Abstract
We describe a modified NMR probe for the in situ irradiation studies of photochemical reactions in solution-state NMR. To build up this setup, we designed an irradiation insert that brings eight light-emitting diodes (LEDs) into the NMR probe in the immediate proximity of the sample. The inserts with LEDs of different wavelengths are easily exchangeable within minutes. A tunable power supply allows to adjust the light intensity to optimize the irradiation conditions.
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Affiliation(s)
- Thomas Paululat
- Dr. Daria V. Berdnikova, Universität Siegen, Organische Chemie II, Adolf-Reichwein-Str. 2, 57076 Siegen, Germany.
| | - Markus Rabe
- Universität Siegen, Werkstatt AR, Adolf-Reichwein-Str. 2, 57076 Siegen, Germany.
| | - Daria V Berdnikova
- Dr. Daria V. Berdnikova, Universität Siegen, Organische Chemie II, Adolf-Reichwein-Str. 2, 57076 Siegen, Germany.
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31
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Cercola R, Wong NGK, Rhodes C, Olijnyk L, Mistry NS, Hall LM, Berenbeim JA, Lynam JM, Dessent CEH. A “one pot” mass spectrometry technique for characterizing solution- and gas-phase photochemical reactions by electrospray mass spectrometry. RSC Adv 2021; 11:19500-19507. [PMID: 35479237 PMCID: PMC9033567 DOI: 10.1039/d1ra02581c] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 05/17/2021] [Indexed: 12/28/2022] Open
Abstract
The characterization of new photochemical pathways is important to progress the understanding of emerging areas of light-triggered inorganic and organic chemistry. In this context, the development of platforms to perform routine characterization of photochemical reactions remains an important goal for photochemists. Here, we demonstrate a new instrument that can be used to characterise both solution-phase and gas-phase photochemical reactions through electrospray ionisation mass spectrometry (ESI-MS). The gas-phase photochemistry is studied by novel laser-interfaced mass spectrometry (LIMS), where the molecular species of interest is introduced to the gas-phase by ESI, mass-selected and then subjected to laser photodissociation in the ion-trap. On-line solution-phase photochemistry is initiated by LEDs prior to ESI-MS in the same instrument with ESI-MS again being used to monitor photoproducts. Two ruthenium metal carbonyls, [Ru(η5-C5H5)(PPh3)2CO][PF6] and [Ru(η5-C5H5)(dppe)CO][PF6] (dppe = 1,2-bis(diphenylphosphino)ethane) are studied using this methodology. We show that the gas-phase photofragmentation pathways observed for the ruthenium complexes via LIMS (i.e. loss of CO + PPh3 ligands from [Ru(η5-C5H5)(PPh3)2CO]+ and loss of just CO from [Ru(η5-C5H5)(dppe)CO]+) mirror the solution-phase photochemistry at 3.4 eV. The advantages of performing the gas-phase and solution-phase photochemical characterisations in a single instrument are discussed. The solution and gas-phase dissociative photochemistry of two ruthenium half-sandwich complexes are analysed with electrospray ionisation mass spectrometry in a novel instrument.![]()
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Affiliation(s)
| | | | - Chris Rhodes
- Department of Chemistry
- University of York
- York YO10 5DD
- UK
| | - Lorna Olijnyk
- Department of Chemistry
- University of York
- York YO10 5DD
- UK
| | | | - Lewis M. Hall
- Department of Chemistry
- University of York
- York YO10 5DD
- UK
| | | | - Jason M. Lynam
- Department of Chemistry
- University of York
- York YO10 5DD
- UK
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32
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Graham MA, Noonan G, Cherryman JH, Douglas JJ, Gonzalez M, Jackson LV, Leslie K, Liu ZQ, McKinney D, Munday RH, Parsons CD, Whittaker DTE, Zhang EX, Zhang JW. Development and Proof of Concept for a Large-Scale Photoredox Additive-Free Minisci Reaction. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.0c00483] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Mark A. Graham
- Chemical Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Gary Noonan
- Chemical Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Janette H. Cherryman
- Chemical Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - James J. Douglas
- Early Chemical Development, Pharmaceutical Sciences, R&D, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Miguel Gonzalez
- Asymchem Laboratories (Tianjin) Co. Ltd., TEDA, Tianjin 300457, P. R. China
| | - Lucinda V. Jackson
- Chemical Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Kevin Leslie
- Chemical Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Zhi-qing Liu
- Asymchem Laboratories (Tianjin) Co. Ltd., TEDA, Tianjin 300457, P. R. China
| | - David McKinney
- Chemical Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Rachel H. Munday
- Chemical Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Chris D. Parsons
- Early Chemical Development, Pharmaceutical Sciences, R&D, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - David T. E. Whittaker
- Early Chemical Development, Pharmaceutical Sciences, R&D, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - En-xuan Zhang
- Asymchem Laboratories (Tianjin) Co. Ltd., TEDA, Tianjin 300457, P. R. China
| | - Jun-wang Zhang
- Asymchem Laboratories (Tianjin) Co. Ltd., TEDA, Tianjin 300457, P. R. China
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33
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Abstract
Magnetic shielding depends on molecular structure and noncovalent interactions. This study shows that it is also measurably dependent on the electric field generated by surrounding molecules. This effect has been observed explicitly for 31P nucleus using the adduct under field approach. The results obtained indicate that the field strength experienced by molecules in crystals consisting of molecules with large dipole moments is similar to that in polar solvents. Therefore, magnetic shielding should explicitly depend on solvent polarity. It is important to note that this effect cannot be reproduced correctly within the polarizable continuum model approach.
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Affiliation(s)
- Ilya G Shenderovich
- Institute of Organic Chemistry, University of Regensburg, Universitaetstrasse 31, 93053 Regensburg, Germany
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34
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Jabeen S, Farag M, Malek B, Choudhury R, Greer A. A Singlet Oxygen Priming Mechanism: Disentangling of Photooxidative and Downstream Dark Effects. J Org Chem 2020; 85:12505-12513. [PMID: 32885660 DOI: 10.1021/acs.joc.0c01712] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Airborne singlet oxygen obtained from photosensitization of triplet dioxygen is shown to react with an alkene surfactant (8-methylnon-7-ene-1 sulfonate) leading to "ene" hydroperoxides that in the dark inactivate planktonic Escherichia coli (E. coli). The "ene" hydroperoxide photoproducts are not toxic on their own, but they become toxic after the bacteria are pretreated with singlet oxygen. The total quenching rate constant (kT) of singlet oxygen of the alkene surfactant was measured to be 1.1 × 106 M-1 s-1 at the air/liquid interface. Through a new mechanism called singlet oxygen priming (SOP), the singlet oxygen leads to hydroperoxides then to peroxyl radicals, tetraoxides, and decomposition products, which also promote disinfection, and therefore offer a "one-two" punch. This offers a strong secondary toxic effect in an otherwise indiscernible dark reaction. The results provide an insight into assisted killing by an exogenous alkene with dark toxicity effects following exposure to singlet oxygen.
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Affiliation(s)
- Shakeela Jabeen
- Department of Chemistry, Brooklyn College of the City University of New York, Brooklyn, New York 11210, United States.,Ph.D. Program in Chemistry, The Graduate Center of the City University of New York, 365 Fifth Avenue, New York, New York 10016, United States
| | - Maria Farag
- Department of Chemistry, Brooklyn College of the City University of New York, Brooklyn, New York 11210, United States
| | - Belaid Malek
- Department of Chemistry, Brooklyn College of the City University of New York, Brooklyn, New York 11210, United States
| | - Rajib Choudhury
- Department of Chemistry, Arkansas Tech University, Russellville, Arkansas 72801, United States
| | - Alexander Greer
- Department of Chemistry, Brooklyn College of the City University of New York, Brooklyn, New York 11210, United States.,Ph.D. Program in Chemistry, The Graduate Center of the City University of New York, 365 Fifth Avenue, New York, New York 10016, United States
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35
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Skubi KL, Swords WB, Hofstetter H, Yoon TP. LED-NMR Monitoring of an Enantioselective Catalytic [2+2] Photocycloaddition. CHEMPHOTOCHEM 2020; 4:685-690. [PMID: 34532566 PMCID: PMC8443221 DOI: 10.1002/cptc.202000094] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Indexed: 01/08/2023]
Abstract
We report that an NMR spectrometer equipped with a high-power LED light source can be used to study a fast enantioselective photocatalytic [2+2] cycloaddition. While traditional ex situ applications of NMR provide considerable information on reaction mechanisms, they are often ineffective for observing fast reactions. Recently, motivated by renewed interest in organic photochemistry, several approaches have been reported for in situ monitoring of photochemical reactions. These previously disclosed methods, however, have rarely been applied to rapid (<5 min) photochemical reactions. Furthermore, these approaches have not previously been used to interrogate the mechanisms of photocatalytic energy-transfer reactions. In the present work, we describe our experimental setup and demonstrate its utility by determining a phenomenological rate law for a model photocatalytic energy-transfer cycloaddition reaction.
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Affiliation(s)
- Kazimer L Skubi
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI (USA)
- Department of Chemistry, Skidmore College, 815 North Broadway, Saratoga Springs, NY (USA)
| | - Wesley B Swords
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI (USA)
| | - Heike Hofstetter
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI (USA)
| | - Tehshik P Yoon
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI (USA)
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36
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Shenderovich IG. Experimentally Established Benchmark Calculations of
31
P NMR Quantities. ACTA ACUST UNITED AC 2020. [DOI: 10.1002/cmtd.202000033] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Ilya G. Shenderovich
- Ilya G. Shenderovich Institute of Organic Chemistry University of Regensburg Universitaetstrasse 31 93053 Regensburg Germany
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37
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Malik JA, Madani A, Pieber B, Seeberger PH. Evidence for Photocatalyst Involvement in Oxidative Additions of Nickel-Catalyzed Carboxylate O-Arylations. J Am Chem Soc 2020; 142:11042-11049. [PMID: 32469219 PMCID: PMC7467672 DOI: 10.1021/jacs.0c02848] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Dual photocatalysis and nickel catalysis can effect cross-coupling under mild conditions, but little is known about the in situ kinetics of this class of reactions. We report a comprehensive kinetic examination of a model carboxylate O-arylation, comparing a state-of-the-art homogeneous photocatalyst (Ir(ppy)3) with a competitive heterogeneous photocatalyst (graphitic carbon nitride). Experimental conditions were adjusted such that the nickel catalytic cycle is saturated with excited photocatalyst. This approach was designed to remove the role of the photocatalyst, by which only the intrinsic behaviors of the nickel catalytic cycles are observed. The two reactions did not display identical kinetics. Ir(ppy)3 deactivates the nickel catalytic cycle and creates more dehalogenated side product. Kinetic data for the reaction using Ir(ppy)3 supports a turnover-limiting reductive elimination. Graphitic carbon nitride gave higher selectivity, even at high photocatalyst-to-nickel ratios. The heterogeneous reaction also showed a rate dependence on aryl halide, indicating that oxidative addition plays a role in rate determination. The results argue against the current mechanistic hypothesis, which states that the photocatalyst is only involved to trigger reductive elimination.
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Affiliation(s)
- Jamal A Malik
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Amiera Madani
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.,Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Bartholomäus Pieber
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Peter H Seeberger
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.,Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
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38
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Zelenka J, Roithová J. Mechanistic Investigation of Photochemical Reactions by Mass Spectrometry. Chembiochem 2020; 21:2232-2240. [DOI: 10.1002/cbic.202000072] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2020] [Revised: 03/23/2020] [Indexed: 11/06/2022]
Affiliation(s)
- Jan Zelenka
- Department of Spectroscopy and CatalysisInstitute for Molecules and MaterialsRadboud University Nijmegen Heyendaalseweg 135 6525 AJ Nijmegen (The Netherlands
| | - Jana Roithová
- Department of Spectroscopy and CatalysisInstitute for Molecules and MaterialsRadboud University Nijmegen Heyendaalseweg 135 6525 AJ Nijmegen (The Netherlands
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39
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Niedek D, Erb FR, Topp C, Seitz A, Wende RC, Eckhardt AK, Kind J, Herold D, Thiele CM, Schreiner PR. In Situ Switching of Site-Selectivity with Light in the Acetylation of Sugars with Azopeptide Catalysts. J Org Chem 2020; 85:1835-1846. [PMID: 31763833 DOI: 10.1021/acs.joc.9b01913] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
We present a novel concept for the in situ control of site-selectivity of catalytic acetylations of partially protected sugars using light as external stimulus and oligopeptide catalysts equipped with an azobenzene moiety. The isomerizable azobenzene-peptide backbone defines the size and shape of the catalytic pocket, while the π-methyl-l-histidine (Pmh) moiety transfers the electrophile. Photoisomerization of the E- to the Z-azobenzene catalyst (monitored via NMR) with an LED (λ = 365 nm) drastically changes the chemical environment around the catalytically active Pmh moiety, so that the light-induced change in the catalyst shape alters site-selectivity. As a proof of principle, we employed (4,6-O-benzylidene)methyl-α-d-pyranosides, which provide a change in regioselectivity from 2:1 (E) to 1:5 (Z) for the monoacetylated products at room temperature. The validity of this new catalyst-design concept is further demonstrated with the regioselective acetylation of the natural product quercetin. In situ irradiation NMR spectroscopy was used to quantify photostationary states under continuous irradiation with UV light.
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Affiliation(s)
- Dominik Niedek
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - Frederik R Erb
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - Christopher Topp
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - Alexander Seitz
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - Raffael C Wende
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - André K Eckhardt
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
| | - Jonas Kind
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie , Technische Universität Darmstadt , Alarich-Weiss-Str. 16 , 64287 Darmstadt , Germany
| | - Dominik Herold
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie , Technische Universität Darmstadt , Alarich-Weiss-Str. 16 , 64287 Darmstadt , Germany
| | - Christina M Thiele
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie , Technische Universität Darmstadt , Alarich-Weiss-Str. 16 , 64287 Darmstadt , Germany
| | - Peter R Schreiner
- Institute of Organic Chemistry , Justus Liebig University , Heinrich-Buff-Ring 17 , 35392 Giessen , Germany
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40
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Rößler M, Huth PU, Liauw MA. Process analytical technology (PAT) as a versatile tool for real-time monitoring and kinetic evaluation of photocatalytic reactions. REACT CHEM ENG 2020. [DOI: 10.1039/d0re00256a] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Combining in situ Raman spectroscopy with multivariate data analysis enables the real-time monitoring and kinetic evaluation of photocatalytic reactions. The applicability is demonstrated on the photooxidation of 4-methoxythiophenol.
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Affiliation(s)
- Martin Rößler
- Institut für Technische und Makromolekulare Chemie (ITMC)
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Philipp U. Huth
- Institut für Technische und Makromolekulare Chemie (ITMC)
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Marcel A. Liauw
- Institut für Technische und Makromolekulare Chemie (ITMC)
- RWTH Aachen University
- 52074 Aachen
- Germany
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