Coupled Electrochemical and Microbial Catalysis for the Production of Polymer Bricks

Engineering the biological conversion of formate into crotonate in Cupriavidus necator

To advance the sustainability of the biobased economy, our society needs to develop novel bioprocesses based on truly renewable resources. The C1-molecule formate is increasingly proposed as carbon and energy source for microbial fermentations, as it can be efficiently generated electrochemically from CO2 and renewable energy. Yet, its biotechnological conversion into value-added compounds has been limited to a handful of examples. In this work, we engineered the natural formatotrophic bacterium C. necator as cell factory to enable biological conversion of formate into crotonate, a platform short-chain unsaturated carboxylic acid of biotechnological relevance. First, we developed a small-scale (150-mL working volume) cultivation setup for growing C. necator in minimal medium using formate as only carbon and energy source. By using a fed-batch strategy with automatic feeding of formic acid, we could increase final biomass concentrations 15-fold compared to batch cultivations in flasks. Then, we engineered a heterologous crotonate pathway in the bacterium via a modular approach, where each pathway section was assessed using multiple candidates. The best performing modules included a malonyl-CoA bypass for increasing the thermodynamic drive towards the intermediate acetoacetyl-CoA and subsequent conversion to crotonyl-CoA through partial reverse β-oxidation. This pathway architecture was then tested for formate-based biosynthesis in our fed-batch setup, resulting in a two-fold higher titer, three-fold higher productivity, and five-fold higher yield compared to the strain not harboring the bypass. Eventually, we reached a maximum product titer of 148.0 ± 6.8 mg/L. Altogether, this work consists in a proof-of-principle integrating bioprocess and metabolic engineering approaches for the biological upgrading of formate into a value-added platform chemical.

Contribution of electrobiotechnology to sustainable development goals

The UN Sustainable Development Goals (SDGs) are 17 interlinked goals designed to be a 'shared blueprint for peace and prosperity for people and the planet, now and into the future'. Therefore, global efforts should focus on achieving these. Herein, we discuss the contribution of electrobiotechnology to the realization of the SDGs.

Electricity-Driven Microbial Metabolism of Carbon and Nitrogen: A Waste-to-Resource Solution

Electricity-driven microbial metabolism relies on the extracellular electron transfer (EET) process between microbes and electrodes and provides promise for resource recovery from wastewater and industrial discharges. Over the past decades, tremendous efforts have been dedicated to designing electrocatalysts and microbes, as well as hybrid systems to push this approach toward industrial adoption. This paper summarizes these advances in order to facilitate a better understanding of electricity-driven microbial metabolism as a sustainable waste-to-resource solution. Quantitative comparisons of microbial electrosynthesis and abiotic electrosynthesis are made, and the strategy of electrocatalyst-assisted microbial electrosynthesis is critically discussed. Nitrogen recovery processes including microbial electrochemical N₂ fixation, electrocatalytic N₂ reduction, dissimilatory nitrate reduction to ammonium (DNRA), and abiotic electrochemical nitrate reduction to ammonia (Abio-NRA) are systematically reviewed. Furthermore, the synchronous metabolism of carbon and nitrogen using hybrid inorganic-biological systems is discussed, including advanced physicochemical, microbial, and electrochemical characterizations involved in this field. Finally, perspectives for future trends are presented. The paper provides valuable insights on the potential contribution of electricity-driven microbial valorization of waste carbon and nitrogen toward a green and sustainable society.

Upgrading Kolbe Electrolysis-Highly Efficient Production of Green Fuels and Solvents by Coupling Biosynthesis and Electrosynthesis

The chemical industry is transitioning to more sustainable and biobased processes. One key element of this transition is coupling energy fluxes and feedstock utilization for optimizing processes, routes and efficiencies. Here, we show for the first time the coupling of the Kolbe electrolysis at the anode with a subsequent microbial conversion of the cathodically produced co-product hydrogen. Kolbe electrolysis of valeric acid yields the liquid drop-in fuel additive n-octane. Subsequently, the solvent isopropanol is produced by resting Cupriavidus necator cells using gaseous electrolysis products (esp. CO2 and H2 ). The resting microbial cells show carbon efficiencies of up to 41 % and Coulombic/Faradaic efficiencies of 60 % and 80 % for anodic and cathodic reactions, respectively. The implementation of a paired electrolyser resulted in superior process performances with overall efficiencies of up to 64.4 %.

Microbial electrosynthesis from carbon dioxide feedstock linked to yeast growth for the production of high-value isoprenoids

The difficulty in producing multi-carbon and thus high-value chemicals from CO₂ is one of the key challenges of microbial electrosynthesis (MES) and other CO₂ utilization technologies. Here, we demonstrate a two-stage bioproduction approach to produce terpenoids (>C₂₀) and yeast biomass from CO₂ by linking MES and yeast cultivation approaches. In the first stage, CO₂ (C₁) is converted to acetate (C₂) using Clostridium ljungdahlii via MES. The acetate is then directly used as the feedstock to produce sclareol (C₂₀), β-carotene (C₄₀), and yeast biomass using Saccharomyces cerevisiae in the second stage. With the unpurified acetate-containing (1.5 g/L) spent medium from MES reactors, S. cerevisiae produced 0.32 ± 0.04 mg/L β-carotene, 2.54 ± 0.91 mg/L sclareol, and 369.66 ± 41.67 mg/L biomass. The primary economic analysis suggests that sclareol and biomass production is feasible using recombinant S. cerevisiae and non-recombinant S. cerevisiae, respectively, directly from unpurified acetate-containing spent medium of MES.

Coupling electrochemical CO2 reduction to microbial product generation - identification of the gaps and opportunities

Reducing the carbon intensity of the chemical industry has become a priority topic. The conversion of CO₂ through combined electrochemical and microbial processes is an attractive perspective for scalable production with a reduced carbon footprint. CO₂ can be electrochemically reduced to several one-carbon compounds such as carbon monoxide, formic acid, and methanol. These intermediates can serve as feedstocks in microbial conversion to produce bulk and fine chemicals. The aim of this article is to show the performance and technology readiness of electrochemical reduction of CO₂ to the various components and the respective biotechnological conversions. Next, these performances are considered in relation to each other and existing gaps for the realization of hybrid microbial electrosynthesis processes are evaluated.

Empower C1: Combination of Electrochemistry and Biology to Convert C1 Compounds

The idea to somehow combine electrical current and biological systems is not new. It was subject of research as well as of science fiction literature for decades. Nowadays, in times of limited resources and the need to capture greenhouse gases like CO₂, this combination gains increasing interest, since it might allow to use C1 compounds and highly oxidized compounds as substrate for microbial production by "activating" them with additional electrons. In this chapter, different possibilities to combine electrochemistry and biology to convert C1 compounds into useful products will be discussed. The chapter first shows electrochemical conversion of C1 compounds, allowing the use of the product as substrate for a subsequent biosynthesis in uncoupled systems, further leads to coupled systems of biology and electrochemical conversion, and finally reaches the discipline of bioelectrosynthesis, where electrical current and C1 compounds are directly converted by microorganisms or enzymes. This overview will give an idea about the potentials and challenges of combining electrochemistry and biology to convert C1 molecules.

Catalytic Cooperation between a Copper Oxide Electrocatalyst and a Microbial Community for Microbial Electrosynthesis

Electrocatalytic metals and microorganisms can be combined for CO₂ conversion in microbial electrosynthesis (MES). However, a systematic investigation on the nature of interactions between metals and MES is still lacking. To investigate this nature, we integrated a copper electrocatalyst, converting CO₂ to formate, with microorganisms, converting CO₂ to acetate. A co-catalytic (i. e. metabolic) relationship was evident, as up to 140 mg L^-1 of formate was produced solely by copper oxide, while formate was also evidently produced by copper and consumed by microorganisms producing acetate. Due to non-metabolic interactions, current density decreased by over 4 times, though acetate yield increased by 3.3 times. Despite the antimicrobial role of copper, biofilm formation was possible on a pure copper surface. Overall, we show for the first time that a CO₂ -reducing copper electrocatalyst can be combined with MES under biological conditions, resulting in metabolic and non-metabolic interactions.

A Comprehensive Modeling Analysis of Formate-Mediated Microbial Electrosynthesis*

Mediated microbial electrosynthesis (MES) represents a promising strategy for the capture and conversion of CO₂ into carbon-based products. We describe the development and application of a comprehensive multiphysics model to analyze a formate-mediated MES reactor. The model shows that this system can achieve a biomass productivity of ∼1.7 g L^-1  h^-1 but is limited by a competitive trade-off between O₂ gas/liquid mass transfer and CO₂ transport to the cathode. Synthetic metabolic strategies are evaluated for formatotrophic growth, which can enable an energy efficiency of ∼21 %, a 30 % improvement over the Calvin cycle. However, carbon utilization efficiency is only ∼10 % in the best cases due to a futile CO₂ cycle, so gas recycling will be necessary for greater efficiency. Finally, separating electrochemical and microbial processes into separate reactors enables a higher biomass productivity of ∼2.4 g L^-1  h^-1 . The mediated MES model and analysis presented here can guide process design for conversion of CO₂ into renewable chemical feedstocks.