1
|
Müller WH, Verdin A, De Pauw E, Malherbe C, Eppe G. Surface-assisted laser desorption/ionization mass spectrometry imaging: A review. MASS SPECTROMETRY REVIEWS 2022; 41:373-420. [PMID: 33174287 PMCID: PMC9292874 DOI: 10.1002/mas.21670] [Citation(s) in RCA: 43] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2020] [Revised: 10/22/2020] [Accepted: 10/24/2020] [Indexed: 05/04/2023]
Abstract
In the last decades, surface-assisted laser desorption/ionization mass spectrometry (SALDI-MS) has attracted increasing interest due to its unique capabilities, achievable through the nanostructured substrates used to promote the analyte desorption/ionization. While the most widely recognized asset of SALDI-MS is the untargeted analysis of small molecules, this technique also offers the possibility of targeted approaches. In particular, the implementation of SALDI-MS imaging (SALDI-MSI), which is the focus of this review, opens up new opportunities. After a brief discussion of the nomenclature and the fundamental mechanisms associated with this technique, which are still highly controversial, the analytical strategies to perform SALDI-MSI are extensively discussed. Emphasis is placed on the sample preparation but also on the selection of the nanosubstrate (in terms of chemical composition and morphology) as well as its functionalization possibilities for the selective analysis of specific compounds in targeted approaches. Subsequently, some selected applications of SALDI-MSI in various fields (i.e., biomedical, biological, environmental, and forensic) are presented. The strengths and the remaining limitations of SALDI-MSI are finally summarized in the conclusion and some perspectives of this technique, which has a bright future, are proposed in this section.
Collapse
Affiliation(s)
- Wendy H. Müller
- Mass Spectrometry Laboratory, MolSys Research Unit, Chemistry DepartmentUniversity of LiègeLiègeBelgium
| | - Alexandre Verdin
- Mass Spectrometry Laboratory, MolSys Research Unit, Chemistry DepartmentUniversity of LiègeLiègeBelgium
| | - Edwin De Pauw
- Mass Spectrometry Laboratory, MolSys Research Unit, Chemistry DepartmentUniversity of LiègeLiègeBelgium
| | - Cedric Malherbe
- Mass Spectrometry Laboratory, MolSys Research Unit, Chemistry DepartmentUniversity of LiègeLiègeBelgium
| | - Gauthier Eppe
- Mass Spectrometry Laboratory, MolSys Research Unit, Chemistry DepartmentUniversity of LiègeLiègeBelgium
| |
Collapse
|
2
|
Samarah LZ, Vertes A. Mass spectrometry imaging based on laser desorption ionization from inorganic and nanophotonic platforms. VIEW 2020. [DOI: 10.1002/viw.20200063] [Citation(s) in RCA: 64] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Affiliation(s)
- Laith Z. Samarah
- Department of Chemistry George Washington University Washington DC USA
| | - Akos Vertes
- Department of Chemistry George Washington University Washington DC USA
| |
Collapse
|
3
|
Singh A, Bhardwaj N, Prasad R. Nanomaterial-Assisted Mass Spectrometry: An Evolving Cutting-Edge Technique. Nanobiomedicine (Rij) 2020. [DOI: 10.1007/978-981-32-9898-9_19] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022] Open
|
4
|
Ho YN, Shu LJ, Yang YL. Imaging mass spectrometry for metabolites: technical progress, multimodal imaging, and biological interactions. WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE 2017; 9. [PMID: 28488813 DOI: 10.1002/wsbm.1387] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2016] [Revised: 01/24/2017] [Accepted: 02/28/2017] [Indexed: 12/19/2022]
Abstract
Imaging mass spectrometry (IMS) allows the study of the spatial distribution of small molecules in biological samples. IMS is able to identify and quantify chemicals in situ from whole tissue sections to single cells. Both vacuum mass spectrometry (MS) and ambient MS systems have advanced considerably over the last decade; however, some limitations are still hard to surmount. Sample pretreatment, matrix or solvent choices, and instrument improvement are the key factors that determine the successful application of IMS to different samples and analytes. IMS with innovative MS analyzers, powerful MS spectrum databases, and analysis tools can efficiently dereplicate, identify, and quantify natural products. Moreover, multimodal imaging systems and multiple MS-based systems provide additional structural, chemical, and morphological information and are applied as complementary tools to explore new fields. IMS has been applied to reveal interactions between living organisms at molecular level. Recently, IMS has helped solve many previously unidentifiable relations between bacteria, fungi, plants, animals, and insects. Other significant interactions on the chemical level can also be resolved using expanding IMS techniques. WIREs Syst Biol Med 2017, 9:e1387. doi: 10.1002/wsbm.1387 For further resources related to this article, please visit the WIREs website.
Collapse
Affiliation(s)
- Ying-Ning Ho
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, Taiwan
| | - Lin-Jie Shu
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, Taiwan
| | - Yu-Liang Yang
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, Taiwan
| |
Collapse
|
5
|
Stopka SA, Rong C, Korte AR, Yadavilli S, Nazarian J, Razunguzwa TT, Morris NJ, Vertes A. Molecular Imaging of Biological Samples on Nanophotonic Laser Desorption Ionization Platforms. Angew Chem Int Ed Engl 2016; 55:4482-6. [DOI: 10.1002/anie.201511691] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2015] [Indexed: 01/09/2023]
Affiliation(s)
- Sylwia A. Stopka
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| | - Charles Rong
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| | - Andrew R. Korte
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| | - Sridevi Yadavilli
- Research Center for Genetic Medicine; Children's National Medical Center; Washington DC 2001 USA
| | - Javad Nazarian
- Research Center for Genetic Medicine; Children's National Medical Center; Washington DC 2001 USA
| | | | | | - Akos Vertes
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| |
Collapse
|
6
|
Stopka SA, Rong C, Korte AR, Yadavilli S, Nazarian J, Razunguzwa TT, Morris NJ, Vertes A. Molecular Imaging of Biological Samples on Nanophotonic Laser Desorption Ionization Platforms. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201511691] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Sylwia A. Stopka
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| | - Charles Rong
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| | - Andrew R. Korte
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| | - Sridevi Yadavilli
- Research Center for Genetic Medicine; Children's National Medical Center; Washington DC 2001 USA
| | - Javad Nazarian
- Research Center for Genetic Medicine; Children's National Medical Center; Washington DC 2001 USA
| | | | | | - Akos Vertes
- Department of Chemistry; The George Washington University; Washington DC 20052 USA
| |
Collapse
|
7
|
Boughton BA, Thinagaran D, Sarabia D, Bacic A, Roessner U. Mass spectrometry imaging for plant biology: a review. PHYTOCHEMISTRY REVIEWS : PROCEEDINGS OF THE PHYTOCHEMICAL SOCIETY OF EUROPE 2015; 15:445-488. [PMID: 27340381 PMCID: PMC4870303 DOI: 10.1007/s11101-015-9440-2] [Citation(s) in RCA: 155] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2015] [Accepted: 09/25/2015] [Indexed: 05/09/2023]
Abstract
Mass spectrometry imaging (MSI) is a developing technique to measure the spatio-temporal distribution of many biomolecules in tissues. Over the preceding decade, MSI has been adopted by plant biologists and applied in a broad range of areas, including primary metabolism, natural products, plant defense, plant responses to abiotic and biotic stress, plant lipids and the developing field of spatial metabolomics. This review covers recent advances in plant-based MSI, general aspects of instrumentation, analytical approaches, sample preparation and the current trends in respective plant research.
Collapse
Affiliation(s)
- Berin A. Boughton
- />Metabolomics Australia, School of BioSciences, The University of Melbourne, Parkville, VIC 3010 Australia
| | - Dinaiz Thinagaran
- />School of BioSciences, The University of Melbourne, Parkville, VIC 3010 Australia
| | - Daniel Sarabia
- />School of BioSciences, The University of Melbourne, Parkville, VIC 3010 Australia
| | - Antony Bacic
- />School of BioSciences, The University of Melbourne, Parkville, VIC 3010 Australia
- />ARC Centre of Excellence in Plant Cell Walls, School of BioSciences, University of Melbourne, Parkville, VIC 3010 Australia
- />Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC 3010 Australia
| | - Ute Roessner
- />School of BioSciences, The University of Melbourne, Parkville, VIC 3010 Australia
| |
Collapse
|
8
|
Tata A, Perez CJ, Hamid TS, Bayfield MA, Ifa DR. Analysis of metabolic changes in plant pathosystems by imprint imaging DESI-MS. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2015; 26:641-8. [PMID: 25510927 DOI: 10.1007/s13361-014-1039-0] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2014] [Revised: 10/27/2014] [Accepted: 10/28/2014] [Indexed: 05/24/2023]
Abstract
The response of plants to microbial pathogens is based on the production of secondary metabolites. The complexity of plant-pathogen interactions makes their understanding a challenging task for metabolomic studies requiring powerful analytical approaches. In this paper, the ability of ambient mass spectrometry to provide a snapshot of plant metabolic response to pathogen invasion was tested. The fluctuations of glycoalkaloids present in sprouted potatoes infected by the phytopathogen Pythium ultimum were monitored by imprint imaging desorption electrospray ionization mass spectrometry (DESI-MS). After 8 d from the inoculation, a decrease of the relative abundance of potato glycoalkaloids α-solanine (m/z 706) and α-chaconine (m/z 722) was observed, whereas the relative intensity of solanidine (m/z 398), solasodenone (m/z 412), solanaviol (m/z 430), solasodiene (m/z 396), solaspiralidine (m/z 428), γ-solanine/γ-chaconine (m/z 560) , β-solanine (m/z 706), and β-chaconine (m/z 722) increased. The progression of the disease, expressed by the development of brown necrotic lesions on the potato, led to the further decrease of all the glycoalkaloid metabolites. Therefore, the applicability of imprint imaging DESI-MS in studying the plant metabolic changes in a simple pathosystem was demonstrated with minimal sample preparation.
Collapse
Affiliation(s)
- Alessandra Tata
- Centre for Research in Mass Spectrometry, Department of Chemistry, York University, Toronto, Ontario, Canada
| | | | | | | | | |
Collapse
|
9
|
Tata A, Perez CJ, Ore MO, Lostun D, Passas A, Morin S, Ifa DR. Evaluation of imprint DESI-MS substrates for the analysis of fungal metabolites. RSC Adv 2015. [DOI: 10.1039/c5ra12805f] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Optimized in situ screening, characterization and imaging of fungal metabolites by imprint DESI-MS.
Collapse
Affiliation(s)
| | | | | | | | | | - Sylvie Morin
- Department of Chemistry
- York University
- Toronto
- Canada
| | | |
Collapse
|
10
|
Papadimitriou A, Silva KC, Peixoto EBMI, Borges CM, Lopes de Faria JM, Lopes de Faria JB. Theobromine increases NAD⁺/Sirt-1 activity and protects the kidney under diabetic conditions. Am J Physiol Renal Physiol 2014; 308:F209-25. [PMID: 25411384 DOI: 10.1152/ajprenal.00252.2014] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Reduction in sirtuin 1 (Sirt-1) is associated with extracellular matrix (ECM) accumulation in the diabetic kidney. Theobromine may reduce kidney ECM accumulation in diabetic rats. In the current study, we aimed to unravel, under diabetic conditions, the mechanism of kidney ECM accumulation induced by a reduction in Sirt-1 and the effect of theobromine in these events. In vitro, we used immortalized human mesangial cells (iHMCs) exposed to high glucose (HG; 30 mM), with or without small interfering RNA for NOX4 and Sirt-1. In vivo, spontaneously hypertensive rats (SHR) were rendered diabetic by means of streptozotocin and studied after 12 wk. The effects of treatment with theobromine were investigated under both conditions. HG leads to a decrease in Sirt-1 activity and NAD(+) levels in iHMCs. Sirt-1 activity could be reestablished by treatment with NAD(+), silencing NOX4, and poly (ADP-ribose) polymerase-1 (PARP-1) blockade, or with theobromine. HG also leads to a low AMP/ATP ratio, acetylation of SMAD3, and increased collagen IV, which is prevented by theobromine. Sirt-1 or AMPK blockade abolished these effects of theobromine. In diabetic SHR, theobromine prevented increases in albuminuria and kidney collagen IV, reduced AMPK, elevated NADPH oxidase activity and PARP-1, and reduced NAD(+) levels and Sirt-1 activity. These results suggest that in diabetes mellitus, Sirt-1 activity is reduced by PARP-1 activation and NAD(+) depletion due to low AMPK, which increases NOX4 expression, leading to ECM accumulation mediated by transforming growth factor (TGF)-β1 signaling. It is suggested that Sirt-1 activation by theobromine may have therapeutic potential for diabetic nephropathy.
Collapse
Affiliation(s)
- Alexandros Papadimitriou
- Renal Pathophysiology Laboratory, Investigation on Diabetes Complications, Faculty of Medical Sciences, State University of Campinas (Unicamp), Campinas, São Paulo, Brazil
| | - Kamila C Silva
- Renal Pathophysiology Laboratory, Investigation on Diabetes Complications, Faculty of Medical Sciences, State University of Campinas (Unicamp), Campinas, São Paulo, Brazil
| | - Elisa B M I Peixoto
- Renal Pathophysiology Laboratory, Investigation on Diabetes Complications, Faculty of Medical Sciences, State University of Campinas (Unicamp), Campinas, São Paulo, Brazil
| | - Cynthia M Borges
- Renal Pathophysiology Laboratory, Investigation on Diabetes Complications, Faculty of Medical Sciences, State University of Campinas (Unicamp), Campinas, São Paulo, Brazil
| | - Jacqueline M Lopes de Faria
- Renal Pathophysiology Laboratory, Investigation on Diabetes Complications, Faculty of Medical Sciences, State University of Campinas (Unicamp), Campinas, São Paulo, Brazil
| | - José B Lopes de Faria
- Renal Pathophysiology Laboratory, Investigation on Diabetes Complications, Faculty of Medical Sciences, State University of Campinas (Unicamp), Campinas, São Paulo, Brazil
| |
Collapse
|