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Efremenko I. Electron Density and Molecular Orbital Analyses of the Nature of Bonding in the η 3-CCH Agostic Rhodium Complexes Preceding the C-C and C-H Bond Cleavages. Molecules 2024; 29:4788. [PMID: 39459157 PMCID: PMC11510536 DOI: 10.3390/molecules29204788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2024] [Revised: 09/26/2024] [Accepted: 09/30/2024] [Indexed: 10/28/2024] Open
Abstract
In our recent work, we revisited C-H and C-C bond activation in rhodium (I) complexes of pincer ligands PCP, PCN, PCO, POCOP, and SCS. Our findings indicated that an η3-Csp2Csp3H agostic intermediate acts as a common precursor to both C-C and C-H bond activation in these systems. We explore the electronic structure and bonding nature of these precleavage complexes using electron density and molecular orbital analyses. Using NBO, IBO, and ESI-3D methods, the bonding in the η3-CCH agostic moiety is depicted by two three-center agostic bonds: Rh-Csp2-Csp3 and Rh-Csp3-H, with all three atoms datively bound to Rh(I). IBO analysis specifically highlights the involvement of three orbitals (CC→Rh and CH→Rh σ donation, plus Rh→CCH π backdonation) in both C-C and C-H bond cleavages. NCIPLOT and QTAIM analyses highlight anagostic (Rh-H) or β-agostic (Rh-Csp2-H) interactions and the absence of Rh-Csp3 interactions. QTAIM molecular graphs suggest bond path instability under dynamic conditions due to the nearness of line and ring critical points. Several low-frequency and low-force vibrational modes interconvert various bonding patterns, reinforcing the dynamic η3-CCH agostic nature. The kinetic preference for C-H bond breaking is attributed to the smaller reduced mass of C-H vibrations compared to C-C vibrations.
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Affiliation(s)
- Irena Efremenko
- Department of Molecular Chemistry and Materials Science, Weizmann Institute of Science, Rehovot 7610001, Israel
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2
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Sajjad MA, Schwerdtfeger P, Cai Y, Waters JM, Harrison JA, Nielson AJ. Bis‐anagostic structures in N,N’‐chelate ligand complexes of palladium(II). Eur J Inorg Chem 2022. [DOI: 10.1002/ejic.202200027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
| | - Peter Schwerdtfeger
- Massey University - Albany Campus: Massey University - Auckland Campus Chemistry NEW ZEALAND
| | - Yicao Cai
- Massey University - Albany Campus: Massey University - Auckland Campus Chemistry NEW ZEALAND
| | - Joyce M. Waters
- Massey University - Albany Campus: Massey University - Auckland Campus Chemistry NEW ZEALAND
| | - John A. Harrison
- Massey University - Albany Campus: Massey University - Auckland Campus Chemistry NEW ZEALAND
| | - Alastair James Nielson
- Massey University at Albany Chemistry. INS Albany CampusPrivate bag 102 904 NSMC Private Bag 102 904 Auckland NEW ZEALAND
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Sajjad MA, Schwerdtfeger P, Harrison JA, Nielson AJ. A Search by NBO Analysis for Syndetic Donation in Known X‐ray Structures of Transition Metal Complexes with Close Aromatic Ring C–H···Metal Approaches. Eur J Inorg Chem 2020. [DOI: 10.1002/ejic.202000336] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- M. Arif Sajjad
- Centre for Theoretical Chemistry and Physics Institute of Advanced Studies Massey University Auckland North Shore Mail Centre 102904 Auckland New Zealand
| | - Peter Schwerdtfeger
- Centre for Theoretical Chemistry and Physics Institute of Advanced Studies Massey University Auckland North Shore Mail Centre 102904 Auckland New Zealand
| | - John A. Harrison
- School of Natural and Computational Sciences Massey University Auckland North Shore Mail Centre Private bag 102904 Auckland New Zealand
| | - Alastair J. Nielson
- School of Natural and Computational Sciences Massey University Auckland North Shore Mail Centre Private bag 102904 Auckland New Zealand
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4
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Raubenheimer HG, Dobrzańska L. Interaction between Cu and Ag free ions and central metals in complexes with XHn units (X = B, Si, N, O, C, Al, Zn, Mg; n = 1, 2). Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2019.213052] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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Harrison JA, Nielson AJ, Sajjad MA, Schwerdtfeger P. Evaluation of the Agostic and Syndetic Donations in Aromatic Ring Agostic Interactions Involved in Heteroatom Ligand-Directed C–H Bond Activation. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00021] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- John A. Harrison
- Chemistry, School of Natural and Computational Sciences, Massey University at Auckland, Private
bag 102904, North Shore Mail centre, Auckland 1603, New Zealand
| | - Alastair J. Nielson
- Chemistry, School of Natural and Computational Sciences, Massey University at Auckland, Private
bag 102904, North Shore Mail centre, Auckland 1603, New Zealand
| | - M. Arif Sajjad
- Department of Chemistry, University of Sialkot, 1-KM Main Daska Road, Sialkot 51040, Pakistan
| | - Peter Schwerdtfeger
- Centre for Theoretical Chemistry and Physics, Institute of Advanced Studies Massey University at Auckland, Private Bag 102904, North Shore Mail centre, Auckland 1603, New Zealand
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Sajjad MA, Harrison JA, Nielson AJ, Schwerdtfeger P. NBO Orbital Interaction Analysis for the Ambiphilic Metal–Ligand Activation/Concerted Metalation Deprotonation (AMLA/CMD) Mechanism Involved in the Cyclopalladation Reaction of N,N-Dimethylbenzylamine with Palladium Acetate. Organometallics 2018. [DOI: 10.1021/acs.organomet.8b00303] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- M. Arif Sajjad
- Chemistry, Institute of Natural and Mathematical Sciences, Massey University, Private Bag 102904, North Shore Mail Centre, Auckland 0632, New Zealand
| | - John A. Harrison
- Chemistry, Institute of Natural and Mathematical Sciences, Massey University, Private Bag 102904, North Shore Mail Centre, Auckland 0632, New Zealand
| | - Alastair J. Nielson
- Chemistry, Institute of Natural and Mathematical Sciences, Massey University, Private Bag 102904, North Shore Mail Centre, Auckland 0632, New Zealand
| | - Peter Schwerdtfeger
- Centre for Theoretical Chemistry and Physics, Institute of Advanced Studies Massey University at Auckland, Private
Bag 102904, North Shore Mail Centre, Auckland 0745, New Zealand
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7
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Sajjad MA, Schwerdtfeger P, Harrison JA, Nielson AJ. Electronic manipulation of the agostic and syndetic components in 1-tetralone oxime and imine complexes of palladium (II). Polyhedron 2018. [DOI: 10.1016/j.poly.2018.05.025] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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8
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Zamora-Moreno J, Murillo F, Muñoz-Hernández MA, Grellier M, Pan S, Jalife S, Merino G, Sabo-Etienne S, Montiel-Palma V. Modulation of an Anagostic Interaction in SiPSi-Type Pincer Platinum Complexes. Organometallics 2018. [DOI: 10.1021/acs.organomet.8b00269] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Julio Zamora-Moreno
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas y Aplicadas, Universidad Autónoma del Estado de Morelos, Avenida Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos C. P. 62209, Mexico
| | - Fernando Murillo
- Departamento de Física Aplicada, CINVESTAV Unidad Mérida, km 6, Antigua Carretera a Progreso, AP 73, Cordemex, Mérida 97310, Yucatán, Mexico
| | - Miguel A. Muñoz-Hernández
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas y Aplicadas, Universidad Autónoma del Estado de Morelos, Avenida Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos C. P. 62209, Mexico
| | - Mary Grellier
- LCC-CNRS, Université
de Toulouse, CNRS, UPS, 205 route de Narbonne, BP 44099, F-31077 Toulouse Cedex 4, France
| | - Sudip Pan
- Departamento de Física Aplicada, CINVESTAV Unidad Mérida, km 6, Antigua Carretera a Progreso, AP 73, Cordemex, Mérida 97310, Yucatán, Mexico
| | - Said Jalife
- Departamento de Física Aplicada, CINVESTAV Unidad Mérida, km 6, Antigua Carretera a Progreso, AP 73, Cordemex, Mérida 97310, Yucatán, Mexico
| | - Gabriel Merino
- Departamento de Física Aplicada, CINVESTAV Unidad Mérida, km 6, Antigua Carretera a Progreso, AP 73, Cordemex, Mérida 97310, Yucatán, Mexico
| | - Sylviane Sabo-Etienne
- LCC-CNRS, Université
de Toulouse, CNRS, UPS, 205 route de Narbonne, BP 44099, F-31077 Toulouse Cedex 4, France
| | - Virginia Montiel-Palma
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas y Aplicadas, Universidad Autónoma del Estado de Morelos, Avenida Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos C. P. 62209, Mexico
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Yadav CL, Rajput G, Manar KK, Kumari K, Drew MGB, Singh N. Cooperative metal–ligand influence on the formation of coordination polymers, and conducting and photophysical properties of Tl(i) β-oxodithioester complexes. Dalton Trans 2018; 47:16264-16278. [DOI: 10.1039/c8dt03694b] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Eight novel luminescent and semiconducting Tl(i) β-oxodithioester complexes forming 1D/2D coordination polymeric structures were investigated using single crystal X-ray diffraction.
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Affiliation(s)
- Chote Lal Yadav
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
| | - Gunjan Rajput
- Department of Chemistry
- Ram Chandra Uniyal Government PG College
- Uttarkashi-249193
- India
| | - Krishna K. Manar
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
| | - Kavita Kumari
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
| | | | - Nanhai Singh
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
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Sajjad MA, Schwerdtfeger P, Harrison JA, Nielson AJ. Weak M···H-C Interactions in Neutral Complexes, Anions and Cations of Palladium(II) and Rhodium(I) Containing the iso
-Quinoline Ligand - Anagostic or Preagostic? Eur J Inorg Chem 2017. [DOI: 10.1002/ejic.201701094] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- M. Arif Sajjad
- Institute of Natural and Mathematical Sciences; Massey University Auckland; Private bag 102904, North Shore Mail Centre Auckland New Zealand
| | - Peter Schwerdtfeger
- Centre for Theoretical Chemistry and Physics; New Zealand Institute for Advanced Studies; 102904, North Shore Mail Centre Auckland New Zealand
| | - John A. Harrison
- Institute of Natural and Mathematical Sciences; Massey University Auckland; Private bag 102904, North Shore Mail Centre Auckland New Zealand
| | - Alastair J. Nielson
- Institute of Natural and Mathematical Sciences; Massey University Auckland; Private bag 102904, North Shore Mail Centre Auckland New Zealand
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11
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Sajjad MA, Harrison JA, Nielson AJ, Schwerdtfeger P. Interplay of Steric and Electronic Effects on the Bonding Components in Aromatic Ring Agostic Interactions. Organometallics 2017. [DOI: 10.1021/acs.organomet.7b00656] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- M. Arif Sajjad
- Chemistry, Institute of Natural
and Mathematical Sciences, Massey University, Private Bag 102904, North Shore
Mail Centre, Auckland 1603, New Zealand
| | - John A. Harrison
- Chemistry, Institute of Natural
and Mathematical Sciences, Massey University, Private Bag 102904, North Shore
Mail Centre, Auckland 1603, New Zealand
| | - Alastair J. Nielson
- Chemistry, Institute of Natural
and Mathematical Sciences, Massey University, Private Bag 102904, North Shore
Mail Centre, Auckland 1603, New Zealand
| | - Peter Schwerdtfeger
- Centre for Theoretical Chemistry
and Physics, Institute of Advanced Studies, Massey University at Auckland, Private
bag 102904, North Shore Mail Centre, Auckland 1603, New Zealand
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12
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Nielson AJ, Harrison JA, Sajjad MA, Schwerdtfeger P. Electronic and Steric Manipulation of the Preagostic Interaction in Isoquinoline Complexes of Rh
I. Eur J Inorg Chem 2017. [DOI: 10.1002/ejic.201700086] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Alastair J. Nielson
- Institute of Natural and Mathematical Sciences Massey University Auckland Private bag 102904, North Shore Mail Centre 0745 Auckland New Zealand
| | - John A. Harrison
- Institute of Natural and Mathematical Sciences Massey University Auckland Private bag 102904, North Shore Mail Centre 0745 Auckland New Zealand
| | - M. Arif Sajjad
- Institute of Natural and Mathematical Sciences Massey University Auckland Private bag 102904, North Shore Mail Centre 0745 Auckland New Zealand
| | - Peter Schwerdtfeger
- Centre for Theoretical Chemistry and Physics Institute of Advanced Studies Massey University Auckland Private bag 102904, North Shore Mail Centre 0745 Auckland New Zealand
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13
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Sajjad MA, Christensen KE, Rees NH, Schwerdtfeger P, Harrison JA, Nielson AJ. Chasing the agostic interaction in ligand assisted cyclometallation reactions of palladium(ii). Dalton Trans 2017; 46:16126-16138. [DOI: 10.1039/c7dt03525j] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Computations show that a possible aromatic ring agostic intermediate seen by NMR spectroscopy in a cyclometallation reaction by palladium(ii) can involve CCπ electron density close to the agostic carbon being donated to the metal.
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Affiliation(s)
- M. Arif Sajjad
- Chemistry
- Institute of Natural and Mathematical Sciences
- Massey University Auckland
- Auckland
- New Zealand
| | | | - Nicholas H. Rees
- Inorganic Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Peter Schwerdtfeger
- Centre for Theoretical and Physics
- The New Zealand Institute for Advanced Study
- Massey University Auckland
- Auckland
- New Zealand
| | - John A. Harrison
- Chemistry
- Institute of Natural and Mathematical Sciences
- Massey University Auckland
- Auckland
- New Zealand
| | - Alastair J. Nielson
- Chemistry
- Institute of Natural and Mathematical Sciences
- Massey University Auckland
- Auckland
- New Zealand
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14
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Sajjad MA, Christensen KE, Rees NH, Schwerdtfeger P, Harrison JA, Nielson AJ. New complexity for aromatic ring agostic interactions. Chem Commun (Camb) 2017; 53:4187-4190. [DOI: 10.1039/c7cc01167a] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Aromatic ring agostic interactions can be augmented by previously unrecognised CCπ to metal donation which has significant implication for ligand-assisted C–H bond functionalization.
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Affiliation(s)
- M. Arif Sajjad
- Chemistry, Institute of Natural and Mathematical Sciences
- Massey University Auckland
- Auckland
- New Zealand
| | | | - Nicholas H. Rees
- Inorganic Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Peter Schwerdtfeger
- Centre for Theoretical and Physics, The New Zealand Institute for Advanced Study
- Massey University Auckland
- Auckland
- New Zealand
| | - John A. Harrison
- Chemistry, Institute of Natural and Mathematical Sciences
- Massey University Auckland
- Auckland
- New Zealand
| | - Alastair J. Nielson
- Chemistry, Institute of Natural and Mathematical Sciences
- Massey University Auckland
- Auckland
- New Zealand
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