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Nanjo T, Matsumoto A, Oshita T, Takemoto Y. Synthesis of Chlorinated Oligopeptides via γ- and δ-Selective Hydrogen Atom Transfer Enabled by the N-Chloropeptide Strategy. J Am Chem Soc 2023; 145:19067-19075. [PMID: 37594470 DOI: 10.1021/jacs.3c06931] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/19/2023]
Abstract
The introduction of a chlorine atom could potentially endow peptide derivatives with notable bioactivity and applicability. However, despite considerable recent progress in C(sp3)-H functionalization chemistry, a general method for the site-selective chlorination of inert aliphatic C-H bonds in peptides still remains elusive. Herein, we report a site-selective C(sp3)-H chlorination of oligopeptides based on an N-chloropeptide strategy. N-chloropeptides, which are easily prepared from the corresponding native oligopeptides, are smoothly degraded in the presence of an appropriate copper catalyst, and a subsequent 1,5-hydrogen atom transfer affords γ- or δ-chlorinated peptides in excellent yield. A wide variety of amino acid residues can thus be site-selectively chlorinated in a predictable manner. This method hence enables the efficient synthesis of otherwise less accessible, chlorine-containing peptide fragments of natural peptides. We moreover demonstrate here the successful estimation of the stereochemistry of the chlorinated carbon atom in aquimarin A. Furthermore, we reveal that side-chain-chlorinated peptides can serve as highly useful substructures with a fine balance between stability and reactivity, which renders them promising targets for synthetic and medicinal applications.
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Affiliation(s)
- Takeshi Nanjo
- Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
| | - Ayaka Matsumoto
- Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
| | - Takuma Oshita
- Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
| | - Yoshiji Takemoto
- Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
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Parella T, Espinosa JF. Long-range proton-carbon coupling constants: NMR methods and applications. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2013; 73:17-55. [PMID: 23962883 DOI: 10.1016/j.pnmrs.2013.07.001] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2013] [Revised: 07/03/2013] [Accepted: 07/03/2013] [Indexed: 06/02/2023]
Abstract
A general review of novel NMR methods to measure heteronuclear long-range proton-carbon coupling constants ((n)JCH; n>1) in small molecules is made. NMR experiments are classified in terms of NMR pulse scheme and cross-peak nature. A discussion about simplicity, general applicability and accuracy for each particular NMR experiment is presented and exemplified. Important aspects such as the sign determination and measurement of very small coupling values involving protonated and non-protonated carbons as well as the complementarity between different experiments are also discussed. Finally, a compilation of applications in structural and conformational analysis of different types of molecules since 2000 is surveyed.
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Affiliation(s)
- Teodor Parella
- Servei de Ressonància Magnètica Nuclear, Universitat Autònoma de Barcelona, 08193 Bellaterra, Barcelona, Spain.
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Ardá A, Nieto MI, Blanco M, Jiménez C, Rodríguez J. Low-Temperature NMR J-Based Configurational Analysis of Flexible Acyclic Systems. J Org Chem 2010; 75:7227-32. [DOI: 10.1021/jo101331e] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Ana Ardá
- Departamento de Química Fundamental, Facultad de Ciencias Universidade da Coruña. Campus da Zapateira, 15071 A Coruña, Spain
| | - Maria Isabel Nieto
- Departamento de Química Fundamental, Facultad de Ciencias Universidade da Coruña. Campus da Zapateira, 15071 A Coruña, Spain
| | - María Blanco
- Departamento de Química Fundamental, Facultad de Ciencias Universidade da Coruña. Campus da Zapateira, 15071 A Coruña, Spain
| | - Carlos Jiménez
- Departamento de Química Fundamental, Facultad de Ciencias Universidade da Coruña. Campus da Zapateira, 15071 A Coruña, Spain
| | - Jaime Rodríguez
- Departamento de Química Fundamental, Facultad de Ciencias Universidade da Coruña. Campus da Zapateira, 15071 A Coruña, Spain
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Di Micco S, Chini MG, Riccio R, Bifulco G. Quantum Mechanical Calculation of NMR Parameters in the Stereostructural Determination of Natural Products. European J Org Chem 2010. [DOI: 10.1002/ejoc.200901255] [Citation(s) in RCA: 85] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Simone Di Micco
- Department of Pharmaceutical Science, University of Salerno, via Ponte don Melillo, 84084 Fisciano (SA), Italy, Fax: +39‐089969602
| | - Maria Giovanna Chini
- Department of Pharmaceutical Science, University of Salerno, via Ponte don Melillo, 84084 Fisciano (SA), Italy, Fax: +39‐089969602
| | - Raffaele Riccio
- Department of Pharmaceutical Science, University of Salerno, via Ponte don Melillo, 84084 Fisciano (SA), Italy, Fax: +39‐089969602
| | - Giuseppe Bifulco
- Department of Pharmaceutical Science, University of Salerno, via Ponte don Melillo, 84084 Fisciano (SA), Italy, Fax: +39‐089969602
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Affiliation(s)
- Ying Jin
- Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, University Town of Shenzhen, Xili, Nanshan District, Shenzhen, China, 518055, and Department of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
| | - Yuqing Liu
- Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, University Town of Shenzhen, Xili, Nanshan District, Shenzhen, China, 518055, and Department of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
| | - Zhuo Wang
- Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, University Town of Shenzhen, Xili, Nanshan District, Shenzhen, China, 518055, and Department of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
| | - Shuqin Kwong
- Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, University Town of Shenzhen, Xili, Nanshan District, Shenzhen, China, 518055, and Department of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
| | - Zhengshuang Xu
- Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, University Town of Shenzhen, Xili, Nanshan District, Shenzhen, China, 518055, and Department of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
| | - Tao Ye
- Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, University Town of Shenzhen, Xili, Nanshan District, Shenzhen, China, 518055, and Department of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
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Poza JJ, Jiménez C, Rodríguez J. J-Based Analysis and DFT-NMR Assignments of Natural Complex Molecules: Application to 3β,7-Dihydroxy-5,6-epoxycholestanes. European J Org Chem 2008. [DOI: 10.1002/ejoc.200800358] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Ardá A, G. Soengas R, Nieto MI, Jiménez C, Rodríguez J. Total Synthesis of (−)-Dysithiazolamide. Org Lett 2008; 10:2175-8. [DOI: 10.1021/ol800551g] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Ana Ardá
- Departamento de Química Fundamental, Facultade de Ciencias, Campus da Zapateira, Universidade da Coruña, 15071 A Coruña, Spain
| | - Raquel G. Soengas
- Departamento de Química Fundamental, Facultade de Ciencias, Campus da Zapateira, Universidade da Coruña, 15071 A Coruña, Spain
| | - M. Isabel Nieto
- Departamento de Química Fundamental, Facultade de Ciencias, Campus da Zapateira, Universidade da Coruña, 15071 A Coruña, Spain
| | - Carlos Jiménez
- Departamento de Química Fundamental, Facultade de Ciencias, Campus da Zapateira, Universidade da Coruña, 15071 A Coruña, Spain
| | - Jaime Rodríguez
- Departamento de Química Fundamental, Facultade de Ciencias, Campus da Zapateira, Universidade da Coruña, 15071 A Coruña, Spain
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