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Wei C, Zhao C, Li J, Li C, Song B, Song R. Innovative Arylimidazole-Fused Phytovirucides via Carbene-Catalyzed [3+4] Cycloaddition: Locking Viral Cell-To-Cell Movement by Out-Competing Virus Capsid-Host Interactions. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2309343. [PMID: 38477505 PMCID: PMC11109656 DOI: 10.1002/advs.202309343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Revised: 02/22/2024] [Indexed: 03/14/2024]
Abstract
The control of potato virus Y (PVY) induced crop failure is a challengeable issue in agricultural chemistry. Although many anti-PVY agents are designed to focus on the functionally important coat protein (CP) of virus, how these drugs act on CP to inactivate viral pathogenicity, remains largely unknown. Herein, a PVY CP inhibitor -3j (S) is disclosed, which is accessed by developing unusually efficient (up to 99% yield) and chemo-selective (> 99:1 er in most cases) carbene-catalyzed [3+4] cycloaddition reactions. Compound -3j bears a unique arylimidazole-fused diazepine skeleton and shows chirality-preferred performance against PVY. In addition, -3j (S) as a mediator allows ARG191 (R191) of CP to be identified as a key amino acid site responsible for intercellular movement of virions. R191 is further demonstrated to be critical for the interaction between PVY CP and the plant functional protein NtCPIP, enabling virions to cross plasmodesmata. This key step can be significantly inhibited through bonding with the -3j (S) to further impair pathogenic behaviors involving systemic infection and particle assembly. The study reveals the in-depth mechanism of action of antiviral agents targeting PVY CP, and contributes to new drug structures and synthetic strategies for PVY management.
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Affiliation(s)
- Chunle Wei
- National Key Laboratory of Green PesticideKey Laboratory of Green Pesticide and Agricultural BioengineeringMinistry of EducationCenter for R&D of Fine Chemicals of Guizhou UniversityGuiyang550025China
| | - Chunni Zhao
- National Key Laboratory of Green PesticideKey Laboratory of Green Pesticide and Agricultural BioengineeringMinistry of EducationCenter for R&D of Fine Chemicals of Guizhou UniversityGuiyang550025China
| | - Jiao Li
- National Key Laboratory of Green PesticideKey Laboratory of Green Pesticide and Agricultural BioengineeringMinistry of EducationCenter for R&D of Fine Chemicals of Guizhou UniversityGuiyang550025China
| | - Chunyi Li
- National Key Laboratory of Green PesticideKey Laboratory of Green Pesticide and Agricultural BioengineeringMinistry of EducationCenter for R&D of Fine Chemicals of Guizhou UniversityGuiyang550025China
| | - Baoan Song
- National Key Laboratory of Green PesticideKey Laboratory of Green Pesticide and Agricultural BioengineeringMinistry of EducationCenter for R&D of Fine Chemicals of Guizhou UniversityGuiyang550025China
| | - Runjiang Song
- National Key Laboratory of Green PesticideKey Laboratory of Green Pesticide and Agricultural BioengineeringMinistry of EducationCenter for R&D of Fine Chemicals of Guizhou UniversityGuiyang550025China
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Gugulothu K, Jatoth R, Edukondalu P, Vanga A, Matta R, Shiva Kumar K. Synthesis of fused bis-indazoles/indazoles via a one-pot sequential strategy. Org Biomol Chem 2023; 21:2816-2821. [PMID: 36924392 DOI: 10.1039/d3ob00121k] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023]
Abstract
We report here an efficient synthesis of fused bis-indazoles/indazoles via a one-pot sequential strategy starting from o-azido aldehydes and amines. This novel method involves the sequential formation of 2H-indazole followed by a Pd-catalyzed intramolecular cross-dehydrogenative coupling reaction. Overall, this one-pot sequential reaction involved the formation of new five bonds, resulting in the formation of three heterocyclic rings.
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Affiliation(s)
- Kishan Gugulothu
- Department of Chemistry, Osmania University, Hyderabad-500 007, India
| | - Ramanna Jatoth
- Department of Chemistry, Osmania University, Hyderabad-500 007, India
| | | | - Anusha Vanga
- Department of Chemistry, Osmania University, Hyderabad-500 007, India
| | - Raghavender Matta
- Department of Chemistry, Osmania University, Hyderabad-500 007, India
| | - K Shiva Kumar
- Department of Chemistry, Osmania University, Hyderabad-500 007, India.,Department of Chemistry, School of Physical Sciences, Central University of Kerala, Kasaragod, Kerala 671320, India.
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Bhaskaran RP, Nayak KH, Sreelekha MK, Babu BP. Progress in copper-catalysed/mediated intramolecular dehydrogenative coupling. Org Biomol Chem 2023; 21:237-251. [PMID: 36448561 DOI: 10.1039/d2ob01796b] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Transition metal-catalysed C-H functionalization reactions are one of the most efficient synthetic methodologies to construct carbon-carbon and carbon-heteroatom bonds. The initial developments in the field were largely dominated by expensive transition metal catalysts. However, in the past decade, the focus of the catalyst shifted to first-row transition metals and copper catalysis contributed significantly. Abundant, cost-effective, and less toxic copper catalysts are an ideal green alternative to palladium and similar metals. The intramolecular dehydrogenative coupling itself developed as a prominent area of focus as the strategy straightaway affords complex polycyclic scaffolds in one pot. Regioselective activation of inert C-H bonds were made possible with copper catalysts and interestingly, oxygen served as the terminal oxidant in most of the cases. In the present review the focus is on the intramolecular dehydrogenative coupling reactions between carbon-hydrogen and heteroatom-hydrogen bonds to afford carbon-carbon and carbon-hetero atom bonds, catalysed/mediated by copper salts. Though the intermolecular dehydrogenative coupling reactions of copper have already been reviewed more than once, to the best of our knowledge this is the first comprehensive account of copper-based intramolecular dehydrogenative coupling.
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Affiliation(s)
- Rasmi P Bhaskaran
- Department of Chemistry National Institute of Technology Karnataka Surathkal, Mangalore, India - 575025.
| | - Kalinga H Nayak
- Department of Chemistry National Institute of Technology Karnataka Surathkal, Mangalore, India - 575025.
| | - Mariswamy K Sreelekha
- Department of Chemistry National Institute of Technology Karnataka Surathkal, Mangalore, India - 575025.
| | - Beneesh P Babu
- Department of Chemistry National Institute of Technology Karnataka Surathkal, Mangalore, India - 575025.
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Lokolkar MS, Kolekar YA, Jagtap PA, Bhanage BM. Cu-Catalyzed C-C Coupling Reactions. TOP ORGANOMETAL CHEM 2023. [DOI: 10.1007/3418_2022_81] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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Solvent Moisture-Controlled Self-Assembly of Fused Benzoimidazopyrrolopyrazines with Different Ring's Interposition. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27082460. [PMID: 35458661 PMCID: PMC9024467 DOI: 10.3390/molecules27082460] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 04/07/2022] [Accepted: 04/07/2022] [Indexed: 11/23/2022]
Abstract
This article shows that two extremely important families of fused heterocyclic assemblies, namely 6-methylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazine and 5a-methyl-5a,6-dihydro-5H,12H-benzo[4,5]imidazo[1,2-a]pyrrolo[1,2-d]pyrazine, can be synthesized from only two available building blocks (N-allenylpyrrole-2-carbaldehyde and o-phenylenediamine) by controlling only one reaction parameter (water content of the medium). It should be emphasized that the latter class of compounds (with an a/d arrangement) is previously unknown. If the allene group is introduced not into the starting compound, but during the reaction (in superbase media), a heterocyclic ensemble, 5-methylbenzo[4,5]imidazo[1,2-a]pyrrolo[2,1-c]pyrazines, with a different position of the methyl group is formed.
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Mejía E, Almasalma AA. Recent Advances on Copper-Catalyzed C–C Bond Formation via C–H Functionalization. SYNTHESIS-STUTTGART 2020. [DOI: 10.1055/s-0040-1707815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Abstract
Reactions that form C–C bonds are at the heart of many important transformations, both in industry and in academia. From the myriad of catalytic approaches to achieve such transformations, those relying on C–H functionalization are gaining increasing interest due to their inherent sustainable nature. In this short review, we showcase the most recent advances in the field of C–C bond formation via C–H functionalization, but focusing only on those methodologies relying on copper catalysts. This coinage metal has gained increased popularity in recent years, not only because it is cheaper and more abundant than precious metals, but also thanks to its rich and versatile chemistry.1 Introduction2 Cross-Dehydrogenative Coupling under Thermal Conditions2.1 C(sp3)–C(sp3) Bond Formation2.2 C(sp3)–C(sp2) Bond Formation2.3 C(sp2)–C(sp2) Bond Formation2.4 C(sp3)–C(sp) Bond Formation3 Cross-Dehydrogenative Coupling under Photochemical Conditions3.1 C(sp3)–C(sp3) Bond Formation3.2 C(sp3)–C(sp2) and C(sp3)–C(sp) Bond Formation4 Conclusion and Perspective
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Shinde VN, Dhiman S, Krishnan R, Kumar D, Kumar A. Synthesis of imidazopyridine-fused indoles via one-pot sequential Knoevenagel condensation and cross dehydrogenative coupling. Org Biomol Chem 2019; 16:6123-6132. [PMID: 30094426 DOI: 10.1039/c8ob01449c] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
A simple and efficient strategy for the synthesis of imidazopyridine-fused indoles has been developed that involves one-pot sequential Knoevenagel condensation of readily available active methylene azoles with N-substituted-1H-indole-3-carboxaldehydes or N-substituted-1H-indole-2-carboxaldehydes followed by palladium-catalyzed intramolecular cross dehydrogenative coupling reaction. A series of 36 derivatives was prepared by using this strategy. The products were obtained in moderate to excellent (32-94%) yields and showed broad substrate scope with tolerance of various functional groups and was amiable for gram scale preparation without problems.
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Affiliation(s)
- Vikki N Shinde
- Department of Chemistry, BITS Pilani, Pilani Campus, Pilani 333031, India.
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Srinivasulu V, Shehadeh I, Khanfar MA, Malik OG, Tarazi H, Abu-Yousef IA, Sebastian A, Baniowda N, O’Connor MJ, Al-Tel TH. One-Pot Synthesis of Diverse Collections of Benzoxazepine and Indolopyrazine Fused to Heterocyclic Systems. J Org Chem 2018; 84:934-948. [DOI: 10.1021/acs.joc.8b02878] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
| | | | | | | | | | - Imad A. Abu-Yousef
- College of Arts and Sciences, Department of Biology, Chemistry and Environmental Sciences, American University of Sharjah, Sharjah, UAE
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Gandeepan P, Müller T, Zell D, Cera G, Warratz S, Ackermann L. 3d Transition Metals for C-H Activation. Chem Rev 2018; 119:2192-2452. [PMID: 30480438 DOI: 10.1021/acs.chemrev.8b00507] [Citation(s) in RCA: 1425] [Impact Index Per Article: 237.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
C-H activation has surfaced as an increasingly powerful tool for molecular sciences, with notable applications to material sciences, crop protection, drug discovery, and pharmaceutical industries, among others. Despite major advances, the vast majority of these C-H functionalizations required precious 4d or 5d transition metal catalysts. Given the cost-effective and sustainable nature of earth-abundant first row transition metals, the development of less toxic, inexpensive 3d metal catalysts for C-H activation has gained considerable recent momentum as a significantly more environmentally-benign and economically-attractive alternative. Herein, we provide a comprehensive overview on first row transition metal catalysts for C-H activation until summer 2018.
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Affiliation(s)
- Parthasarathy Gandeepan
- Institut für Organische und Biomolekulare Chemie , Georg-August-Universität Göttingen , Tammannstraße 2 , 37077 Göttingen , Germany
| | - Thomas Müller
- Institut für Organische und Biomolekulare Chemie , Georg-August-Universität Göttingen , Tammannstraße 2 , 37077 Göttingen , Germany
| | - Daniel Zell
- Institut für Organische und Biomolekulare Chemie , Georg-August-Universität Göttingen , Tammannstraße 2 , 37077 Göttingen , Germany
| | - Gianpiero Cera
- Institut für Organische und Biomolekulare Chemie , Georg-August-Universität Göttingen , Tammannstraße 2 , 37077 Göttingen , Germany
| | - Svenja Warratz
- Institut für Organische und Biomolekulare Chemie , Georg-August-Universität Göttingen , Tammannstraße 2 , 37077 Göttingen , Germany
| | - Lutz Ackermann
- Institut für Organische und Biomolekulare Chemie , Georg-August-Universität Göttingen , Tammannstraße 2 , 37077 Göttingen , Germany
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Sarkar R, Mukhopadhyay C. Cu catalyzed cross-dehydrogenative coupling reaction for the synthesis of 3-hydroxy-2-pyrrolidinones. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.06.061] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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