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Nasir Ahamed NN, Mendiola-Escobedo CA, Perez-Gonzalez VH, Lapizco-Encinas BH. Development of a DC-Biased AC-Stimulated Microfluidic Device for the Electrokinetic Separation of Bacterial and Yeast Cells. BIOSENSORS 2024; 14:237. [PMID: 38785711 PMCID: PMC11117482 DOI: 10.3390/bios14050237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2024] [Revised: 04/19/2024] [Accepted: 05/04/2024] [Indexed: 05/25/2024]
Abstract
Electrokinetic (EK) microsystems, which are capable of performing separations without the need for labeling analytes, are a rapidly growing area in microfluidics. The present work demonstrated three distinct binary microbial separations, computationally modeled and experimentally performed, in an insulator-based EK (iEK) system stimulated by DC-biased AC potentials. The separations had an increasing order of difficulty. First, a separation between cells of two distinct domains (Escherichia coli and Saccharomyces cerevisiae) was demonstrated. The second separation was for cells from the same domain but different species (Bacillus subtilis and Bacillus cereus). The last separation included cells from two closely related microbial strains of the same domain and the same species (two distinct S. cerevisiae strains). For each separation, a novel computational model, employing a continuous spatial and temporal function for predicting the particle velocity, was used to predict the retention time (tR,p) of each cell type, which aided the experimentation. All three cases resulted in separation resolution values Rs>1.5, indicating complete separation between the two cell species, with good reproducibility between the experimental repetitions (deviations < 6%) and good agreement (deviations < 18%) between the predicted tR,p and experimental (tR,e) retention time values. This study demonstrated the potential of DC-biased AC iEK systems for performing challenging microbial separations.
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Affiliation(s)
- Nuzhet Nihaar Nasir Ahamed
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA; (N.N.N.A.); (C.A.M.-E.)
| | - Carlos A. Mendiola-Escobedo
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA; (N.N.N.A.); (C.A.M.-E.)
- School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey 64700, Nuevo Leon, Mexico
| | - Victor H. Perez-Gonzalez
- School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey 64700, Nuevo Leon, Mexico
| | - Blanca H. Lapizco-Encinas
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA; (N.N.N.A.); (C.A.M.-E.)
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2
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Julius LAN, Akgül D, Krishnan G, Falk F, Korvink J, Badilita V. Portable dielectrophoresis for biology: ADEPT facilitates cell trapping, separation, and interactions. MICROSYSTEMS & NANOENGINEERING 2024; 10:29. [PMID: 38434587 PMCID: PMC10907756 DOI: 10.1038/s41378-024-00654-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 12/04/2023] [Accepted: 01/12/2024] [Indexed: 03/05/2024]
Abstract
Dielectrophoresis is a powerful and well-established technique that allows label-free, non-invasive manipulation of cells and particles by leveraging their electrical properties. The practical implementation of the associated electronics and user interface in a biology laboratory, however, requires an engineering background, thus hindering the broader adoption of the technique. In order to address these challenges and to bridge the gap between biologists and the engineering skills required for the implementation of DEP platforms, we report here a custom-built, compact, universal electronic platform termed ADEPT (adaptable dielectrophoresis embedded platform tool) for use with a simple microfluidic chip containing six microelectrodes. The versatility of the open-source platform is ensured by a custom-developed graphical user interface that permits simple reconfiguration of the control signals to address a wide-range of specific applications: (i) precision positioning of the single bacterium/cell/particle in the micrometer range; (ii) viability-based separation by achieving a 94% efficiency in separating live and dead yeast; (iii) phenotype-based separation by achieving a 96% efficiency in separating yeast and Bacillus subtilis; (iv) cell-cell interactions by steering a phagocytosis process where a granulocyte engulfs E. coli RGB-S bacterium. Together, the set of experiments and the platform form a complete basis for a wide range of possible applications addressing various biological questions exploiting the plug-and-play design and the intuitive GUI of ADEPT.
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Affiliation(s)
- Lourdes Albina Nirupa Julius
- Department, Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344 Baden-Württemberg Germany
| | - Dora Akgül
- Department, Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344 Baden-Württemberg Germany
| | - Gowri Krishnan
- Department, Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344 Baden-Württemberg Germany
| | - Fabian Falk
- Department, Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344 Baden-Württemberg Germany
| | - Jan Korvink
- Department, Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344 Baden-Württemberg Germany
| | - Vlad Badilita
- Department, Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344 Baden-Württemberg Germany
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3
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Lomeli-Martin A, Ahamed N, Abhyankar VV, Lapizco-Encinas BH. Electropatterning-Contemporary developments for selective particle arrangements employing electrokinetics. Electrophoresis 2023; 44:884-909. [PMID: 37002779 PMCID: PMC10330388 DOI: 10.1002/elps.202200286] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Revised: 02/25/2023] [Accepted: 03/27/2023] [Indexed: 04/04/2023]
Abstract
The selective positioning and arrangement of distinct types of multiscale particles can be used in numerous applications in microfluidics, including integrated circuits, sensors and biochips. Electrokinetic (EK) techniques offer an extensive range of options for label-free manipulation and patterning of colloidal particles by exploiting the intrinsic electrical properties of the target of interest. EK-based techniques have been widely implemented in many recent studies, and various methodologies and microfluidic device designs have been developed to achieve patterning two- and three-dimensional (3D) patterned structures. This review provides an overview of the progress in electropatterning research during the last 5 years in the microfluidics arena. This article discusses the advances in the electropatterning of colloids, droplets, synthetic particles, cells, and gels. Each subsection analyzes the manipulation of the particles of interest via EK techniques such as electrophoresis and dielectrophoresis. The conclusions summarize recent advances and provide an outlook on the future of electropatterning in various fields of application, especially those with 3D arrangements as their end goal.
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Affiliation(s)
- Adrian Lomeli-Martin
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, New York, USA
| | - Nuzhet Ahamed
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, New York, USA
| | - Vinay V. Abhyankar
- Biological Microsystems Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, New York, USA
| | - Blanca H. Lapizco-Encinas
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, New York, USA
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4
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Vaghef-Koodehi A, Ernst OD, Lapizco-Encinas BH. Separation of Cells and Microparticles in Insulator-Based Electrokinetic Systems. Anal Chem 2023; 95:1409-1418. [PMID: 36599093 DOI: 10.1021/acs.analchem.2c04366] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Presented here is the first continuous separation of microparticles and cells of similar characteristics employing linear and nonlinear electrokinetic phenomena in an insulator-based electrokinetic (iEK) system. By utilizing devices with insulating features, which distort the electric field distribution, it is possible to combine linear and nonlinear EK phenomena, resulting in highly effective separation schemes that leverage the new advancements in nonlinear electrophoresis. This work combines mathematical modeling and experimentation to separate four distinct binary mixtures of particles and cells. A computational model with COMSOL Multiphysics was used to predict the retention times (tR,p) of the particles and cells in iEK devices. Then, the experimental separations were carried out using the conditions identified with the model, where the experimental retention time (tR,e) of the particles and cells was measured. A total of four distinct separations of binary mixtures were performed by increasing the level of difficulty. For the first separation, two types of polystyrene microparticles, selected to mimic Escherichia coli and Saccharomyces cerevisiae cells, were separated. By leveraging the knowledge gathered from the first separation, a mixture of cells of distinct domains and significant size differences, E. coli and S. cerevisiae, was successfully separated. The third separation also featured cells of different domains but closer in size: Bacillus cereus versus S. cerevisiae. The last separation included cells in the same domain and genus, B. cereus versus Bacillus subtilis. Separation results were evaluated in terms of number of plates (N) and separation resolution (Rs), where Rs values for all separations were above 1.5, illustrating complete separations. Experimental results were in agreement with modeling results in terms of retention times, with deviations in the 6-27% range, while the variation between repetitions was between 2 and 18%, demonstrating good reproducibility. This report is the first prediction of the retention time of cells in iEK systems.
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Affiliation(s)
- Alaleh Vaghef-Koodehi
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, New York14623, United States
| | - Olivia D Ernst
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, New York14623, United States
| | - Blanca H Lapizco-Encinas
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, New York14623, United States
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Deivasigamani R, Abdul Nasir NS, Mohamed MA, Buyong MR. In vitro dielectrophoresis of HEK cell migration for stimulating chronic wound epithelialization. Electrophoresis 2021; 43:609-620. [PMID: 34859896 DOI: 10.1002/elps.202100207] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 11/21/2021] [Accepted: 11/29/2021] [Indexed: 11/10/2022]
Abstract
This article describes a dielectrophoresis (DEP)-based simulation and experimental study of human epidermal keratinocyte (HEK) cells for wounded skin cell migration toward rapid epithelialization. MyDEP is a standalone software designed specifically to study dielectric particles and cell response to an alternating current (AC) electric field. This method demonstrated that negative dielectrophoresis (NDEP ) occurs in HEK cells at a wide frequency range in highly conductive medium. The finite element method was used to characterize particle trajectory based on DEP and drag force. The performance of the system was assessed using HEK cells in a highly conductive EpiLife suspending medium. The DEP experiment was performed by applying sinusoidal wave AC potential at the peak-to-peak voltage of 10 V in a tapered aluminum microelectrode array from 100 kHz to 1 MHz. We experimentally observed the occurrence of NDEP, which attracted HEK cells toward the local electric field minima in the region of interest. The DIPP-MotionV software was used to track cell migration in the prerecorded video via an automatic marker and estimate the average speed and acceleration of the cells. The results showed that HEK cell migration was accomplished approximately at 6.43 μm/s at 100 kHz with 10 V, and FDEP caused the cells to migrate and align at the target position, which resulted in faster wound closures because of the application of an electric field frequency to HEK cells in random locations.
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Affiliation(s)
- Revathy Deivasigamani
- Universiti Kebangsaan Malaysia (UKM), Institute of Microengineering and Nanoelectronics (IMEN), Bangi, Selangor, Malaysia
| | - Nur Shahira Abdul Nasir
- Universiti Kebangsaan Malaysia (UKM), Institute of Microengineering and Nanoelectronics (IMEN), Bangi, Selangor, Malaysia
| | - Mohd Ambri Mohamed
- Universiti Kebangsaan Malaysia (UKM), Institute of Microengineering and Nanoelectronics (IMEN), Bangi, Selangor, Malaysia
| | - Muhamad Ramdzan Buyong
- Universiti Kebangsaan Malaysia (UKM), Institute of Microengineering and Nanoelectronics (IMEN), Bangi, Selangor, Malaysia
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6
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Vaghef-Koodehi A, Lapizco-Encinas BH. Microscale electrokinetic-based analysis of intact cells and viruses. Electrophoresis 2021; 43:263-287. [PMID: 34796523 DOI: 10.1002/elps.202100254] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 11/08/2021] [Accepted: 11/11/2021] [Indexed: 12/11/2022]
Abstract
Miniaturized electrokinetic methods have proven to be robust platforms for the analysis and assessment of intact microorganisms, offering short response times and higher integration than their bench-scale counterparts. The present review article discusses three types of electrokinetic-based methodologies: electromigration or motion-based techniques, electrode-based electrokinetics, and insulator-based electrokinetics. The fundamentals of each type of methodology are discussed and relevant examples from recent reports are examined, to provide the reader with an overview of the state-of-the-art on the latest advancements on the analysis of intact cells and viruses with microscale electrokinetic techniques. The concluding remarks discuss the potential applications and future directions.
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Affiliation(s)
- Alaleh Vaghef-Koodehi
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, NY, USA
| | - Blanca H Lapizco-Encinas
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, NY, USA
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7
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Maidin NNM, Buyong MR, Rahim RA, Mohamed MA. Dielectrophoresis applications in biomedical field and future perspectives in biomedical technology. Electrophoresis 2021; 42:2033-2059. [PMID: 34346062 DOI: 10.1002/elps.202100043] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 07/25/2021] [Accepted: 07/27/2021] [Indexed: 11/09/2022]
Abstract
Dielectrophoresis (DEP) is a technique to manipulate trajectories of polarisable particles in non-uniform electric fields by utilising unique dielectric properties. The manipulation of a cell using DEP has been demonstrated in various modes, thereby indicating potential applications in the biomedical field. In this review, recent DEP applications in the biomedical field are discussed. This review is intended to highlight research work that shows significant approach related to dielectrophoresis application in biomedical field reported between 2016 and 2020. Firstly, single-shell model and multiple-shell model of cells are introduced. Current device structures and recently introduced electrode patterns for DEP applications are discussed. Secondly, the biomedical uses of DEP in liquid biopsies, stem cell therapies, and diagnosis of infectious diseases due to bacteria and viruses are presented. Finally, the challenges in DEP research are discussed, and the reported solutions are explained. DEP's potential research directions are mentioned. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Nur Nasyifa Mohd Maidin
- Institute of Microengineering and Nanoelectronic (IMEN), Universiti Kebangsaan Malaysia (UKM), Bangi, Selangor, 43600, Malaysia
| | - Muhamad Ramdzan Buyong
- Institute of Microengineering and Nanoelectronic (IMEN), Universiti Kebangsaan Malaysia (UKM), Bangi, Selangor, 43600, Malaysia
| | - Ruslinda A Rahim
- Institute of Nano Electronic Engineering (INEE), Universiti Malaysia Perlis (UniMAP), Kangar, Perlis, 01000, Malaysia.,National Nanotechnology Centre (NNC), Ministry of Science Technology and Innovation (MOSTI), Federal Government Administrative Centre, Putrajaya, 62662, Malaysia
| | - Mohd Ambri Mohamed
- Institute of Microengineering and Nanoelectronic (IMEN), Universiti Kebangsaan Malaysia (UKM), Bangi, Selangor, 43600, Malaysia
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Perez‐Gonzalez VH. Particle trapping in electrically driven insulator-based microfluidics: Dielectrophoresis and induced-charge electrokinetics. Electrophoresis 2021; 42:2445-2464. [PMID: 34081787 PMCID: PMC9291494 DOI: 10.1002/elps.202100123] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 05/29/2021] [Accepted: 06/01/2021] [Indexed: 12/31/2022]
Abstract
Electrokinetically driven insulator‐based microfluidic devices represent an attractive option to manipulate particle suspensions. These devices can filtrate, concentrate, separate, or characterize micro and nanoparticles of interest. Two decades ago, inspired by electrode‐based dielectrophoresis, the concept of insulator‐based dielectrophoresis (iDEP) was born. In these microfluidic devices, insulating structures (i.e., posts, membranes, obstacles, or constrictions) built within the channel are used to deform the spatial distribution of an externally generated electric field. As a result, particles suspended in solution experience dielectrophoresis (DEP). Since then, it has been assumed that DEP is responsible for particle trapping in these devices, regardless of the type of voltage being applied to generate the electric field—direct current (DC) or alternating current. Recent findings challenge this assumption by demonstrating particle trapping and even particle flow reversal in devices that prevent DEP from occurring (i.e., unobstructed long straight channels stimulated with a DC voltage and featuring a uniform electric field). The theory introduced to explain those unexpected observations was then applied to conventional “DC‐iDEP” devices, demonstrating better prediction accuracy than that achieved with the conventional DEP‐centered theory. This contribution summarizes contributions made during the last two decades, comparing both theories to explain particle trapping and highlighting challenges to address in the near future.
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Hakim KS, Lapizco-Encinas BH. Analysis of microorganisms with nonlinear electrokinetic microsystems. Electrophoresis 2021; 42:588-604. [PMID: 33151541 DOI: 10.1002/elps.202000233] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Revised: 10/04/2020] [Accepted: 11/02/2020] [Indexed: 02/06/2023]
Abstract
Nonlinear electrokinetics (EK), specifically electrophoresis of the second kind, dielectrophoresis (DEP) and electrorotation (EROT), have gained significant interest recently for their flexibility and labeless discriminant manner of operation. The current applications of these technologies are a clear advancement from what they were when first discovered, but also still show strong signs of future growth. The present review article presents a discussion of the current uses of microscale nonlinear EK technologies as analytical, sensing, and purification tools for microorganisms. The discussion is focused on some of the latest discoveries with various nonlinear EK microfluidic techniques, such as DEP particle trapping and EROT for particle assessments, for the analysis of microorganisms ranging from viruses to parasites. Along the way, special focus was given to key research articles from within the past two years to provide the most up-to-date knowledge on the current state-of-the-art within the field of microscale EK, and from there, an outlook on where the future of the field is headed is also included.
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Affiliation(s)
- Kel S Hakim
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, NY, USA
| | - Blanca H Lapizco-Encinas
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, NY, USA
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Benhal P, Quashie D, Kim Y, Ali J. Insulator Based Dielectrophoresis: Micro, Nano, and Molecular Scale Biological Applications. SENSORS (BASEL, SWITZERLAND) 2020; 20:E5095. [PMID: 32906803 PMCID: PMC7570478 DOI: 10.3390/s20185095] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2020] [Revised: 08/16/2020] [Accepted: 09/04/2020] [Indexed: 12/31/2022]
Abstract
Insulator based dielectrophoresis (iDEP) is becoming increasingly important in emerging biomolecular applications, including particle purification, fractionation, and separation. Compared to conventional electrode-based dielectrophoresis (eDEP) techniques, iDEP has been demonstrated to have a higher degree of selectivity of biological samples while also being less biologically intrusive. Over the past two decades, substantial technological advances have been made, enabling iDEP to be applied from micro, to nano and molecular scales. Soft particles, including cell organelles, viruses, proteins, and nucleic acids, have been manipulated using iDEP, enabling the exploration of subnanometer biological interactions. Recent investigations using this technique have demonstrated a wide range of applications, including biomarker screening, protein folding analysis, and molecular sensing. Here, we review current state-of-art research on iDEP systems and highlight potential future work.
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Affiliation(s)
- Prateek Benhal
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, Tallahassee, FL 32310, USA;
- National High Magnetic Field Laboratory, Tallahassee, FL 32310, USA
| | - David Quashie
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, Tallahassee, FL 32310, USA;
- National High Magnetic Field Laboratory, Tallahassee, FL 32310, USA
| | - Yoontae Kim
- American Dental Association Science & Research Institute, Gaithersburg, MD 20899, USA;
| | - Jamel Ali
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, Tallahassee, FL 32310, USA;
- National High Magnetic Field Laboratory, Tallahassee, FL 32310, USA
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Detection of cell-free DNA nanoparticles in insulator based dielectrophoresis systems. J Chromatogr A 2020; 1626:461262. [PMID: 32797810 DOI: 10.1016/j.chroma.2020.461262] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 05/07/2020] [Accepted: 05/18/2020] [Indexed: 01/22/2023]
Abstract
In this paper, a semi-analytical investigation was performed to study the effect of the geometrical parameters of insulator-based dielectrophoresis (iDEP) systems for cell free DNA (cfDNA) trapping. For this purpose, first electrical potential and fluid flow fields were calculated by solving the governing equations including Poisson and Navier-stokes equations with appropriate boundary conditions (BCs) and then a Lagrangian approach was utilized to analyze the motion of cfDNA under the most important forces affected on it including Brownian, Drag, electrophoresis and dielectrophoresis (DEP) forces. The effect of the different parameters such as the electrical conductivity of the medium, shape and geometrical parameters of the insulators on the dielectrophoretic behavior of cfDNA was studied and the optimal value of these parameters was presented. Finally, in order to predict the minimum voltage required for cfDNA trapping, artificial neural network (ANN) was utilized and a relation between input and output parameters was introduced.
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12
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Epping MS, Wedde S, Grundmann A, Radukic M, Gröger H, Hummel A, Viefhues M. Dielectrophoretic analysis of the impact of isopropyl alcohol on the electric polarisability of Escherichia coli whole-cells. Anal Bioanal Chem 2020; 412:3925-3933. [PMID: 32157360 PMCID: PMC7235074 DOI: 10.1007/s00216-020-02451-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 01/13/2020] [Accepted: 01/23/2020] [Indexed: 12/18/2022]
Abstract
Whole-cell biocatalysts are versatile tools in (industrial) production processes; though, the effects that impact the efficiency are not fully understood yet. One main factor that affects whole-cell biocatalysts is the surrounding medium, which often consists of organic solvents due to low solubility of substrates in aqueous solutions. It is expected that organic solvents change the biophysical and biochemical properties of the whole-cell biocatalysts, e.g. by permeabilising the cell membrane, and thus analysis of these effects is of high importance. In this work, we present an analysis method to study the impact of organic solvents on whole-cell biocatalysts by means of dielectrophoresis. For instance, we evaluate the changes of the characteristic dielectrophoretic trapping ratio induced by incubation of Escherichia coli, serving as a model system, in an aqueous medium containing isopropyl alcohol. Therefore, we could evaluate the impact on the electric polarisability of the cells. For this purpose, a special microchannel device was designed and Escherichia coli cells were genetically modified to reliably synthesise a green fluorescent protein. We could demonstrate that our method was capable of revealing different responses to small changes in isopropyl alcohol concentration and incubation duration. Complementary spectrophotometric UV-Vis (ultraviolet-visible light) absorbance analysis of released NAD(P)+/NAD(P)H cofactor and proteins confirmed our results. Based on our results, we discuss the biophysical effects taking place during incubation. Graphical abstract.
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Affiliation(s)
- Miriam S Epping
- Experimental Biophysics and Applied Nanosciences, Department of Physics, Bielefeld University, 33615, Bielefeld, Germany
| | - Severin Wedde
- Industrial Organic Chemistry and Biotechnology, Department of Chemistry, Bielefeld University, 33615, Bielefeld, Germany
- Fermentation Engineering, Department of Technology, Bielefeld University, 33615, Bielefeld, Germany
| | - Armin Grundmann
- Experimental Biophysics and Applied Nanosciences, Department of Physics, Bielefeld University, 33615, Bielefeld, Germany
| | - Marco Radukic
- Experimental Biophysics and Applied Nanosciences, Department of Physics, Bielefeld University, 33615, Bielefeld, Germany
- Cellular and Molecular Biotechnology, Department of Technology, Bielefeld University, 33615, Bielefeld, Germany
| | - Harald Gröger
- Industrial Organic Chemistry and Biotechnology, Department of Chemistry, Bielefeld University, 33615, Bielefeld, Germany
| | - Anke Hummel
- Industrial Organic Chemistry and Biotechnology, Department of Chemistry, Bielefeld University, 33615, Bielefeld, Germany
| | - Martina Viefhues
- Experimental Biophysics and Applied Nanosciences, Department of Physics, Bielefeld University, 33615, Bielefeld, Germany.
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13
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Creation of an electrokinetic characterization library for the detection and identification of biological cells. Anal Bioanal Chem 2020; 412:3935-3945. [DOI: 10.1007/s00216-020-02621-9] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Revised: 03/19/2020] [Accepted: 03/26/2020] [Indexed: 11/26/2022]
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14
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Davaran S, Sadeghinia M, Jamalpoor Z, Raeisdasteh Hokmabad V, Doosti-Telgerd M, Karimian A, Sadeghinia Z, Khalilifard J, Keramt A, Moradikhah F, Sadeghinia A. Multiple functions of microfluidic platforms: Characterization and applications in tissue engineering and diagnosis of cancer. Electrophoresis 2020; 41:1081-1094. [PMID: 32103511 DOI: 10.1002/elps.201900341] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2019] [Revised: 02/16/2020] [Accepted: 02/19/2020] [Indexed: 12/13/2022]
Abstract
Microfluidic system, or lab-on-a-chip, has grown explosively. This system has been used in research for the first time and then entered in the clinical section. Due to economic reasons, this technique has been used for screening of laboratory and clinical indices. The microfluidic system solves some difficulties accompanied by clinical and biological applications. In this review, the interpretation and analysis of some recent developments in microfluidic systems in biomedical applications with more emphasis on tissue engineering and cancer will be discussed. Moreover, we try to discuss the features and functions of microfluidic systems.
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Affiliation(s)
- Soodabeh Davaran
- Department of Pharmaceutical Chemistry, Faculty of pharmacy, Tabriz University of Medical Science, Tabriz, Iran.,Drug Applied Research Center, Tabriz University of Medical Science, Tabriz, Iran
| | - Mohammad Sadeghinia
- School of Chemistry, University College of Science, University of Tehran, Tehran, Iran
| | - Zahra Jamalpoor
- Trauma Research Center, Aja University of Medical Science, Tehran, Iran
| | - Vahideh Raeisdasteh Hokmabad
- Drug Applied Research Center and Department of Medical Nanotechnology, Faculty of Advanced Medical Science, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Mehdi Doosti-Telgerd
- Department of Pharmaceutical Biomaterials, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | - Ansar Karimian
- Cellular and Molecular Biology Research Center, Health Research Institute, Babol University of Medical Sciences, Babol, Iran
| | - Zahra Sadeghinia
- Faculty of Medicine, Kashan University of Medical Sciences, Kashan, Iran
| | - Javad Khalilifard
- Hepatitis Research Center, Lorestan University of Medical Sciences, Kohorramabad, Iran
| | - Akram Keramt
- Department of Pharmaceutical Chemistry, Faculty of pharmacy, Tabriz University of Medical Science, Tabriz, Iran.,Drug Applied Research Center, Tabriz University of Medical Science, Tabriz, Iran
| | - Farzad Moradikhah
- Department of Biomedical Engineering, Amirkabir, University of Technology, Tehran, Iran
| | - Ali Sadeghinia
- Department of Pharmaceutical Chemistry, Faculty of pharmacy, Tabriz University of Medical Science, Tabriz, Iran.,Drug Applied Research Center, Tabriz University of Medical Science, Tabriz, Iran.,Drug Applied Research Center and Department of Medical Nanotechnology, Faculty of Advanced Medical Science, Tabriz University of Medical Sciences, Tabriz, Iran.,Student Research Committee, Tabriz University of Medical Sciences, Tabriz, Iran
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15
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Viefhues M. Analytics in Microfluidic Systems. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2020; 179:191-209. [DOI: 10.1007/10_2020_131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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16
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Ten-Second Electrophysiology: Evaluation of the 3DEP Platform for high-speed, high-accuracy cell analysis. Sci Rep 2019; 9:19153. [PMID: 31844107 PMCID: PMC6915758 DOI: 10.1038/s41598-019-55579-9] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2019] [Accepted: 11/18/2019] [Indexed: 01/08/2023] Open
Abstract
Electrical correlates of the physiological state of a cell, such as membrane conductance and capacitance, as well as cytoplasm conductivity, contain vital information about cellular function, ion transport across the membrane, and propagation of electrical signals. They are, however, difficult to measure; gold-standard techniques are typically unable to measure more than a few cells per day, making widespread adoption difficult and limiting statistical reproducibility. We have developed a dielectrophoretic platform using a disposable 3D electrode geometry that accurately (r2 > 0.99) measures mean electrical properties of populations of ~20,000 cells, by taking parallel ensemble measurements of cells at 20 frequencies up to 45 MHz, in (typically) ten seconds. This allows acquisition of ultra-high-resolution (100-point) DEP spectra in under two minutes. Data acquired from a wide range of cells – from platelets to large cardiac cells - benchmark well with patch-clamp-data. These advantages are collectively demonstrated in a longitudinal (same-animal) study of rapidly-changing phenomena such as ultradian (2–3 hour) rhythmicity in whole blood samples of the common vole (Microtus arvalis), taken from 10 µl tail-nick blood samples and avoiding sacrifice of the animal that is typically required in these studies.
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17
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Crowther CV, Sanderlin V, Hayes MA, Gile GH. Effects of surface treatments on trapping with DC insulator-based dielectrophoresis. Analyst 2019; 144:7478-7488. [PMID: 31720589 DOI: 10.1039/c9an01186b] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
A central challenge in measuring the biophysical properties of cells with electrokinetic approaches is the assignment of these biophysical properties to specific biological characteristics. Changes in the electrokinetic behavior of cells may come from mutations, altered gene expression levels, post-translation modifications, or environmental effects. Here we assess the electrokinetic behavior of chemically surface-modified bacterial cells in order to gain insight into the biophysical properties that are specifically affected by changes in surface chemistry. Using E. coli as a scaffold, an amine coupling reaction was used to covalently attach glycine, spermine, bovine serum albumin (protein), or 7-amino-4-methyl-3-coumarinylacetic acid (fluorescent dye) to the free carboxylic acid groups on the surface of the cells. These populations, along with unlabeled control cells, were subject to electrokinetic and dielectrophoretic measurements to quantify any changes in the biophysical properties upon alteration. The properties associated with each electrokinetic force are discussed relative to the specific reactant used. We conclude that relatively modest and superficial changes to cell surfaces can cause measurable changes in their biophysical properties.
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Affiliation(s)
- Claire V Crowther
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA.
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18
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Analysis of Bacteriophages with Insulator-Based Dielectrophoresis. MICROMACHINES 2019; 10:mi10070450. [PMID: 31277396 PMCID: PMC6680707 DOI: 10.3390/mi10070450] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Revised: 06/28/2019] [Accepted: 06/30/2019] [Indexed: 02/07/2023]
Abstract
Bacterial viruses or phages have great potential in the medical and agricultural fields as alternatives to antibiotics to control nuisance populations of pathogenic bacteria. However, current analysis and purification protocols for phages tend to be resource intensive and have numbers of limitations, such as impacting phage viability. The present study explores the potential of employing the electrokinetic technique of insulator-based dielectrophoresis (iDEP) for virus assessment, separation and enrichment. In particular, the application of the parameter "trapping value" (Tv) is explored as a standardized iDEP signature for each phage species. The present study includes mathematical modeling with COMSOL Multiphysics and extensive experimentation. Three related, but genetically and structurally distinct, phages were studied: Salmonella enterica phage SPN3US, Pseudomonas aeruginosa phage ϕKZ and P. chlororaphis phage 201ϕ2-1. This is the first iDEP study on bacteriophages with large and complex virions and the results illustrate their virions can be successfully enriched with iDEP systems and still retain infectivity. In addition, our results indicate that characterization of the negative dielectrophoretic response of a phage in terms of Tv could be used for predicting individual virus behavior in iDEP systems. The findings reported here can contribute to the establishment of protocols to analyze, purify and/or enrich samples of known and unknown phages.
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19
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Crowther CV, Hilton SH, Kemp L, Hayes MA. Isolation and identification of Listeria monocytogenes utilizing DC insulator-based dielectrophoresis. Anal Chim Acta 2019; 1068:41-51. [PMID: 31072476 DOI: 10.1016/j.aca.2019.03.019] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Revised: 03/04/2019] [Accepted: 03/08/2019] [Indexed: 02/06/2023]
Abstract
Foodborne pathogens pose one of the greatest challenges facing public health in the modern day. One important pathogen, Listeria monocytogenes, is known to be challenging to detect and identify. Three serovars cause most of the Listeria related food-borne illnesses, which the Centers for Disease Control currently utilizes a combination of pulsed-field gel electrophoresis and whole genome sequencing for identification and the determination of clusters and outbreaks. There is a potential method for rapid collection of epidemiological information by exploiting the electrokinetic and dielectrophoretic properties of the L. monocytogenes serovars. Using dielectrophoresis, the three most commonly identified serovars of L. monocytogenes can be distinguished from each other. The electrokinetic and dielectrophoretic mobilities of each serovar was determined through a combination of electrokinetic velocity and dielectrophoretic trapping assessments, in conjunction with finite element multi-physics modeling. A mathematical model of the data, which defines the various factors of dielectrophoretic trapping, is utilized and verified based on the behavior of L. monocytogenes in the microchannel. The trapping condition for the serovars were evaluated as 2.8±0.2×109, 2.2±0.2×109, and 2.2±0.3×109Vm-2 and the electrokinetic mobility was assessed to be 19±0.7, 17±0.7, and for the L. monocytogenes serovars 1/2a, 1/2b, and 4b, respectively.
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Affiliation(s)
- Claire V Crowther
- School of Molecular Sciences, Arizona State University, Tempe, AZ, USA
| | | | - LaKeta Kemp
- Phoenix Research Institute, Phoenix, AZ, USA
| | - Mark A Hayes
- School of Molecular Sciences, Arizona State University, Tempe, AZ, USA.
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20
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Reale R, De Ninno A, Businaro L, Bisegna P, Caselli F. A simple electrical approach to monitor dielectrophoretic focusing of particles flowing in a microchannel. Electrophoresis 2019; 40:1400-1407. [PMID: 30661234 DOI: 10.1002/elps.201800423] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2018] [Revised: 12/20/2018] [Accepted: 01/02/2019] [Indexed: 02/01/2023]
Abstract
This paper reports an impedance-based system for the quantitative assessment of dielectrophoretic (DEP) focusing of single particles flowing in a microchannel. Particle lateral positions are detected in two electrical sensing zones placed before and after a DEP-focusing region, respectively. In each sensing zone, particle lateral positions are estimated using the unbalance between the opposite pulses of a differential current signal obtained with a straightforward coplanar electrode configuration. The system is used to monitor the focusing of polystyrene beads of 7 or 10 μm diameter, under various conditions of DEP field intensities and flow rates that produce different degrees of focusing. This electrical approach represents a simple and valuable alternative to optical methods for monitoring of particle focusing systems.
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Affiliation(s)
- Riccardo Reale
- Department of Civil Engineering and Computer Science, University of Rome Tor Vergata, Rome, Italy
| | - Adele De Ninno
- Department of Civil Engineering and Computer Science, University of Rome Tor Vergata, Rome, Italy
| | - Luca Businaro
- Institute for Photonics and Nanotechnologies, Italian National Research Council, Rome, Italy
| | - Paolo Bisegna
- Department of Civil Engineering and Computer Science, University of Rome Tor Vergata, Rome, Italy
| | - Federica Caselli
- Department of Civil Engineering and Computer Science, University of Rome Tor Vergata, Rome, Italy
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21
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Abdullah A, Dastider SG, Jasim I, Shen Z, Yuksek N, Zhang S, Dweik M, Almasri M. Microfluidic based impedance biosensor for pathogens detection in food products. Electrophoresis 2019; 40:508-520. [DOI: 10.1002/elps.201800405] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2018] [Revised: 11/28/2018] [Accepted: 11/29/2018] [Indexed: 11/11/2022]
Affiliation(s)
- Amjed Abdullah
- Department of Electrical and Computer Engineering University of Missouri Columbia MO USA
| | | | - Ibrahem Jasim
- Department of Electrical and Computer Engineering University of Missouri Columbia MO USA
| | - Zhenyu Shen
- Department Veterinary Pathobiology University of Missouri Columbia MO USA
| | - Nuh Yuksek
- Department of Electrical and Computer Engineering University of Missouri Columbia MO USA
| | - Shuping Zhang
- Department Veterinary Pathobiology University of Missouri Columbia MO USA
| | - Majed Dweik
- Co‐operative Research and Life and Physical Sciences Lincoln University Jefferson City MO USA
| | - Mahmoud Almasri
- Department of Electrical and Computer Engineering University of Missouri Columbia MO USA
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22
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Pesch GR, Lorenz M, Sachdev S, Salameh S, Du F, Baune M, Boukany PE, Thöming J. Bridging the scales in high-throughput dielectrophoretic (bio-)particle separation in porous media. Sci Rep 2018; 8:10480. [PMID: 29993026 PMCID: PMC6041321 DOI: 10.1038/s41598-018-28735-w] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Accepted: 06/28/2018] [Indexed: 01/09/2023] Open
Abstract
Dielectrophoresis (DEP) is a versatile technique for the solution of difficult (bio-)particle separation tasks based on size and material. Particle motion by DEP requires a highly inhomogeneous electric field. Thus, the throughput of classical DEP devices is limited by restrictions on the channel size to achieve large enough gradients. Here, we investigate dielectrophoretic filtration, in which channel size and separation performance are decoupled because particles are trapped at induced field maxima in a porous separation matrix. By simulating microfluidic model porous media, we derive design rules for DEP filters and verify them using model particles (polystyrene) and biological cells (S. cerevisiae, yeast). Further, we bridge the throughput gap by separating yeast in an alumina sponge and show that the design rules are equally applicable in real porous media at high throughput. While maintaining almost 100% efficiency, we process up to 9 mL min−1, several orders of magnitude more than most state-of-the-art DEP applications. Our microfluidic approach provides new insight into trapping dynamics in porous media, which even can be applied in real sponges. These results pave the way toward high-throughput retention, which is capable of solving existing problems such as cell separation in liquid biopsy or precious metal recovery.
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Affiliation(s)
- Georg R Pesch
- University of Bremen and Center for Environmental Research and Sustainable Technology, Chemical Engineering: Recovery and Recycling (VdW), Bremen, Germany.
| | - Malte Lorenz
- University of Bremen and Center for Environmental Research and Sustainable Technology, Chemical Engineering: Recovery and Recycling (VdW), Bremen, Germany
| | - Shaurya Sachdev
- Delft University of Technology, Department of Chemical Engineering, Delft, The Netherlands
| | - Samir Salameh
- Delft University of Technology, Department of Chemical Engineering, Delft, The Netherlands
| | - Fei Du
- University of Bremen and Center for Environmental Research and Sustainable Technology, Chemical Engineering: Recovery and Recycling (VdW), Bremen, Germany
| | - Michael Baune
- University of Bremen and Center for Environmental Research and Sustainable Technology, Chemical Engineering: Recovery and Recycling (VdW), Bremen, Germany
| | - Pouyan E Boukany
- Delft University of Technology, Department of Chemical Engineering, Delft, The Netherlands.
| | - Jorg Thöming
- University of Bremen and Center for Environmental Research and Sustainable Technology, Chemical Engineering: Recovery and Recycling (VdW), Bremen, Germany
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23
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Perez-Gonzalez VH, Gallo-Villanueva RC, Cardenas-Benitez B, Martinez-Chapa SO, Lapizco-Encinas BH. Simple Approach to Reducing Particle Trapping Voltage in Insulator-Based Dielectrophoretic Systems. Anal Chem 2018. [DOI: 10.1021/acs.analchem.8b00139] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Victor H. Perez-Gonzalez
- School of Engineering and Sciences, Sensors and Devices Research Group, Tecnologico de Monterrey, Monterrey, Nuevo Leon 64849, Mexico
| | - Roberto C. Gallo-Villanueva
- School of Engineering and Sciences, Sensors and Devices Research Group, Tecnologico de Monterrey, Monterrey, Nuevo Leon 64849, Mexico
| | - Braulio Cardenas-Benitez
- School of Engineering and Sciences, Sensors and Devices Research Group, Tecnologico de Monterrey, Monterrey, Nuevo Leon 64849, Mexico
| | - Sergio O. Martinez-Chapa
- School of Engineering and Sciences, Sensors and Devices Research Group, Tecnologico de Monterrey, Monterrey, Nuevo Leon 64849, Mexico
| | - Blanca H. Lapizco-Encinas
- Microscale Bioseparations Laboratory, Rochester Institute of Technology, Rochester, New York 14623, United States
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24
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Zhang D, Zhou T, He F, Rong Y, Lee SH, Wu S, Zuo L. Reactive oxygen species formation and bystander effects in gradient irradiation on human breast cancer cells. Oncotarget 2018; 7:41622-41636. [PMID: 27223435 PMCID: PMC5173083 DOI: 10.18632/oncotarget.9517] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2015] [Accepted: 04/18/2016] [Indexed: 11/25/2022] Open
Abstract
Ionizing radiation (IR) in cancer radiotherapy can induce damage to neighboring cells via non-targeted effects by irradiated cells. These so-called bystander effects remain an area of interest as it may provide enhanced efficacy in killing carcinomas with minimal radiation. It is well known that reactive oxygen species (ROS) are ubiquitous among most biological activities. However, the role of ROS in bystander effects has not been thoroughly elucidated. We hypothesized that gradient irradiation (GI) has enhanced therapeutic effects via the ROS-mediated bystander pathways as compared to uniform irradiation (UI). We evaluated ROS generation, viability, and apoptosis in breast cancer cells (MCF-7) exposed to UI (5 Gy) or GI (8–2 Gy) in radiation fields at 2, 24 and 48 h after IR. We found that extracellular ROS release induced by GI was higher than that by UI at both 24 h (p < 0.001) and 48 h (p < 0.001). More apoptosis and less viability were observed in GI when compared to UI at either 24 h or 48 h after irradiation. The mean effective doses (ED) of GI were ~130% (24 h) and ~48% (48 h) higher than that of UI, respectively. Our results suggest that GI is superior to UI regarding redox mechanisms, ED, and toxic dosage to surrounding tissues.
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Affiliation(s)
- Dongqing Zhang
- Radiologic Sciences and Respiratory Therapy Division, School of Health and Rehabilitation Sciences, The Ohio State University College of Medicine, Columbus, OH 43210, USA.,Urology Nevada/Northern Nevada Radiation Oncology, Reno, NV 89521, USA
| | - Tingyang Zhou
- Radiologic Sciences and Respiratory Therapy Division, School of Health and Rehabilitation Sciences, The Ohio State University College of Medicine, Columbus, OH 43210, USA.,Interdisciplinary Biophysics Graduate Program, The Ohio State University, Columbus, OH 43210, USA
| | - Feng He
- Department of Health and Exercise Sciences, Skidmore College, Saratoga Springs, NY 12866, USA
| | - Yi Rong
- Department of Radiation Oncology, The James Cancer Hospital, The Ohio State University Wexner Medical Center, Columbus, OH 43210, USA
| | - Shin Hee Lee
- Edison Biotechnology Institute, Ohio University, Athens, OH 45701, USA
| | - Shiyong Wu
- Edison Biotechnology Institute, Ohio University, Athens, OH 45701, USA.,Department of Chemistry and Biochemistry, Molecular and Cellular Biology Program, Ohio University, Athens, OH 45701, USA
| | - Li Zuo
- Radiologic Sciences and Respiratory Therapy Division, School of Health and Rehabilitation Sciences, The Ohio State University College of Medicine, Columbus, OH 43210, USA.,Davis Heart and Lung Research Institute, The Ohio State University Wexner Medical Center, Columbus, OH 43210, USA.,Interdisciplinary Biophysics Graduate Program, The Ohio State University, Columbus, OH 43210, USA
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25
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Aghilinejad A, Aghaamoo M, Chen X, Xu J. Effects of electrothermal vortices on insulator-based dielectrophoresis for circulating tumor cell separation. Electrophoresis 2017; 39:869-877. [DOI: 10.1002/elps.201700264] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2017] [Revised: 09/05/2017] [Accepted: 09/08/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Arian Aghilinejad
- Department of Mechanical Engineering; Washington State University; Vancouver WA USA
| | - Mohammad Aghaamoo
- Department of Biomedical Engineering; University of California; Irvine CA USA
| | - Xiaolin Chen
- Department of Mechanical Engineering; Washington State University; Vancouver WA USA
| | - Jie Xu
- Department of Mechanical and Industrial Engineering; University of Illinois at Chicago; Chicago IL USA
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26
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Saucedo-Espinosa MA, Lapizco-Encinas BH. Exploiting Particle Mutual Interactions To Enable Challenging Dielectrophoretic Processes. Anal Chem 2017; 89:8459-8467. [DOI: 10.1021/acs.analchem.7b02008] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Mario A. Saucedo-Espinosa
- Microscale Bioseparations
Laboratory, Rochester Institute of Technology, Rochester, New York 14623, United States
| | - Blanca H. Lapizco-Encinas
- Microscale Bioseparations
Laboratory, Rochester Institute of Technology, Rochester, New York 14623, United States
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27
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Abd Rahman N, Ibrahim F, Yafouz B. Dielectrophoresis for Biomedical Sciences Applications: A Review. SENSORS 2017; 17:s17030449. [PMID: 28245552 PMCID: PMC5375735 DOI: 10.3390/s17030449] [Citation(s) in RCA: 101] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2016] [Revised: 12/10/2016] [Accepted: 12/20/2016] [Indexed: 12/18/2022]
Abstract
Dielectrophoresis (DEP) is a label-free, accurate, fast, low-cost diagnostic technique that uses the principles of polarization and the motion of bioparticles in applied electric fields. This technique has been proven to be beneficial in various fields, including environmental research, polymer research, biosensors, microfluidics, medicine and diagnostics. Biomedical science research is one of the major research areas that could potentially benefit from DEP technology for diverse applications. Nevertheless, many medical science research investigations have yet to benefit from the possibilities offered by DEP. This paper critically reviews the fundamentals, recent progress, current challenges, future directions and potential applications of research investigations in the medical sciences utilizing DEP technique. This review will also act as a guide and reference for medical researchers and scientists to explore and utilize the DEP technique in their research fields.
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Affiliation(s)
- Nurhaslina Abd Rahman
- Department of Biomedical Engineering, Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur, Malaysia.
- Centre for Innovation in Medical Engineering (CIME), Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur, Malaysia.
| | - Fatimah Ibrahim
- Department of Biomedical Engineering, Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur, Malaysia.
- Centre for Innovation in Medical Engineering (CIME), Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur, Malaysia.
| | - Bashar Yafouz
- Department of Biomedical Engineering, Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur, Malaysia.
- Centre for Innovation in Medical Engineering (CIME), Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur, Malaysia.
- Faculty of Engineering and Information Technology, Taiz University, 6803 Taiz, Yemen.
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28
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Samiei E, de Leon Derby MD, den Berg AV, Hoorfar M. An electrohydrodynamic technique for rapid mixing in stationary droplets on digital microfluidic platforms. LAB ON A CHIP 2017; 17:227-234. [PMID: 27957575 DOI: 10.1039/c6lc00997b] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
This paper presents an electrohydrodynamic technique for rapid mixing of droplets in open and closed digital microfluidic (DMF) platforms. Mixing is performed by applying a high frequency AC voltage to the coplanar or parallel electrodes, inducing circulation zones inside the droplet which results in rapid mixing of the content. The advantages of the proposed method in comparison to conventional mixing methods that operate based on transporting the droplet back and forth and side to side include 1) a shorter mixing time (as fast as 0.25 s), 2) the use of a fewer number of electrodes, reducing the size of the chip, and 3) the stationary nature of the technique which reduces the chance of cross-contamination and surface biofouling. Mixing using the proposed method is performed to create a uniform mixture after merging a water droplet with another droplet containing either particles or dye. The results show that increasing the frequency, and or the amplitude of the applied voltage, enhances the mixing process. However, actuation with a very high frequency and voltage may result in shedding pico-liter satellite droplets. Therefore, for each frequency there is an effective range of the amplitude which provides rapid mixing and avoids shedding satellite droplets. Also, the increase in the gap height between the two plates (for the closed DMF platforms) significantly enhances the mixing efficiency due to the lower viscous effects. Effects of the addition of salts and DNA to the samples were also studied. The electrothermal effect decreased for these cases, which was solved by increasing the frequency of the applied voltage. To assure the high frequency actuation does not increase the sample temperature excessively, the temperature change was monitored using a thermal imaging camera and it was found that the increase in temperature is negligible.
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Affiliation(s)
- Ehsan Samiei
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V 1V7, Canada.
| | - Maria Diaz de Leon Derby
- Escuela de Ingeniería y Ciencias, Instituto Tecnológico y de Estudios Superiores de Monterrey, Campus San Luis Potosí, 300 Avenida Eugenio Garza Sada, Lomas del Tecnológico, San Luis Potosí, S.L.P. 78211, Mexico
| | - Andre Van den Berg
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V 1V7, Canada.
| | - Mina Hoorfar
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V 1V7, Canada.
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29
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Alazzam A, Mathew B, Khashan S. Microfluidic Platforms for Bio-applications. ADVANCED MECHATRONICS AND MEMS DEVICES II 2017. [DOI: 10.1007/978-3-319-32180-6_12] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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30
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Huang L, Bian S, Cheng Y, Shi G, Liu P, Ye X, Wang W. Microfluidics cell sample preparation for analysis: Advances in efficient cell enrichment and precise single cell capture. BIOMICROFLUIDICS 2017; 11:011501. [PMID: 28217240 PMCID: PMC5303167 DOI: 10.1063/1.4975666] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2016] [Accepted: 01/24/2017] [Indexed: 05/03/2023]
Abstract
Single cell analysis has received increasing attention recently in both academia and clinics, and there is an urgent need for effective upstream cell sample preparation. Two extremely challenging tasks in cell sample preparation-high-efficiency cell enrichment and precise single cell capture-have now entered into an era full of exciting technological advances, which are mostly enabled by microfluidics. In this review, we summarize the category of technologies that provide new solutions and creative insights into the two tasks of cell manipulation, with a focus on the latest development in the recent five years by highlighting the representative works. By doing so, we aim both to outline the framework and to showcase example applications of each task. In most cases for cell enrichment, we take circulating tumor cells (CTCs) as the target cells because of their research and clinical importance in cancer. For single cell capture, we review related technologies for many kinds of target cells because the technologies are supposed to be more universal to all cells rather than CTCs. Most of the mentioned technologies can be used for both cell enrichment and precise single cell capture. Each technology has its own advantages and specific challenges, which provide opportunities for researchers in their own area. Overall, these technologies have shown great promise and now evolve into real clinical applications.
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Affiliation(s)
- Liang Huang
- State Key Laboratory of Precision Measurement Technology and Instrument, Department of Precision Instrument, Tsinghua University , Beijing, China
| | - Shengtai Bian
- Department of Biomedical Engineering, Tsinghua University , Beijing, China
| | - Yinuo Cheng
- State Key Laboratory of Precision Measurement Technology and Instrument, Department of Precision Instrument, Tsinghua University , Beijing, China
| | - Guanya Shi
- Department of Automotive Engineering, Tsinghua University , Beijing, China
| | - Peng Liu
- Department of Biomedical Engineering, Tsinghua University , Beijing, China
| | - Xiongying Ye
- State Key Laboratory of Precision Measurement Technology and Instrument, Department of Precision Instrument, Tsinghua University , Beijing, China
| | - Wenhui Wang
- State Key Laboratory of Precision Measurement Technology and Instrument, Department of Precision Instrument, Tsinghua University , Beijing, China
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31
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Saucedo-Espinosa MA, LaLonde A, Gencoglu A, Romero-Creel MF, Dolas JR, Lapizco-Encinas BH. Dielectrophoretic manipulation of particle mixtures employing asymmetric insulating posts. Electrophoresis 2015; 37:282-90. [DOI: 10.1002/elps.201500195] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2015] [Revised: 09/12/2015] [Accepted: 10/09/2015] [Indexed: 11/08/2022]
Affiliation(s)
- Mario A. Saucedo-Espinosa
- Biomedical Engineering Department; Microscale Bioseparations Laboratory, Rochester Institute of Technology; Rochester NY USA
| | - Alexandra LaLonde
- Biomedical Engineering Department; Microscale Bioseparations Laboratory, Rochester Institute of Technology; Rochester NY USA
| | - Aytug Gencoglu
- Biomedical Engineering Department; Microscale Bioseparations Laboratory, Rochester Institute of Technology; Rochester NY USA
| | - Maria F. Romero-Creel
- Biomedical Engineering Department; Microscale Bioseparations Laboratory, Rochester Institute of Technology; Rochester NY USA
| | - Jay R. Dolas
- Biomedical Engineering Department; Microscale Bioseparations Laboratory, Rochester Institute of Technology; Rochester NY USA
| | - Blanca H. Lapizco-Encinas
- Biomedical Engineering Department; Microscale Bioseparations Laboratory, Rochester Institute of Technology; Rochester NY USA
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Saucedo-Espinosa M, Lapizco-Encinas B. Design of insulator-based dielectrophoretic devices: Effect of insulator posts characteristics. J Chromatogr A 2015; 1422:325-333. [DOI: 10.1016/j.chroma.2015.10.030] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Revised: 10/09/2015] [Accepted: 10/09/2015] [Indexed: 10/22/2022]
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Liesche J, Marek M, Günther-Pomorski T. Cell wall staining with Trypan blue enables quantitative analysis of morphological changes in yeast cells. Front Microbiol 2015; 6:107. [PMID: 25717323 PMCID: PMC4324143 DOI: 10.3389/fmicb.2015.00107] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2014] [Accepted: 01/27/2015] [Indexed: 11/13/2022] Open
Abstract
Yeast cells are protected by a cell wall that plays an important role in the exchange of substances with the environment. The cell wall structure is dynamic and can adapt to different physiological states or environmental conditions. For the investigation of morphological changes, selective staining with fluorescent dyes is a valuable tool. Furthermore, cell wall staining is used to facilitate sub-cellular localization experiments with fluorescently-labeled proteins and the detection of yeast cells in non-fungal host tissues. Here, we report staining of Saccharomyces cerevisiae cell wall with Trypan Blue, which emits strong red fluorescence upon binding to chitin and yeast glucan; thereby, it facilitates cell wall analysis by confocal and super-resolution microscopy. The staining pattern of Trypan Blue was similar to that of the widely used UV-excitable, blue fluorescent cell wall stain Calcofluor White. Trypan Blue staining facilitated quantification of cell size and cell wall volume when utilizing the optical sectioning capacity of a confocal microscope. This enabled the quantification of morphological changes during growth under anaerobic conditions and in the presence of chemicals, demonstrating the potential of this approach for morphological investigations or screening assays.
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Affiliation(s)
- Johannes Liesche
- Department of Plant and Environmental Sciences, University of Copenhagen Copenhagen, Denmark
| | - Magdalena Marek
- Department of Plant and Environmental Sciences, University of Copenhagen Copenhagen, Denmark
| | - Thomas Günther-Pomorski
- Department of Plant and Environmental Sciences, University of Copenhagen Copenhagen, Denmark
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