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Khan N, Sengupta P. Technological Advancement and Trend in Selective Bioanalytical Sample Extraction through State of the Art 3-D Printing Techniques Aiming 'Sorbent Customization as per need'. Crit Rev Anal Chem 2024:1-21. [PMID: 38319592 DOI: 10.1080/10408347.2024.2305275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2024]
Abstract
The inherent complexity of biological matrices and presence of several interfering substances in biological samples make them unsuitable for direct analysis. An effective sample preparation technique assists in analyte enrichment, improving selectivity and sensitivity of bioanalytical method. Because of several key benefits of employing 3D printed sorbent in sample extraction, it has recently gained popularity across a variety of industries. Applications for 3D printing in the field of bioanalytical research have grown recently, particularly in the areas of miniaturization, (bio)sensing, sample preparation, and separation sciences. Due to the high expense of the solid phase microextraction cartridge, researcher approaches in-lab production of sorbent material for the extraction of analyte from biological samples. Owing to its distinct advantages such as low costs, automation capabilities, capacity to produce products in a variety of shapes, and reduction of tedious steps of sample preparation, 3D printed sorbents are gaining increased attention in the field of bioanalysis. It is also reported to offer high selectivity and assist in achieving a much lower limit of detection. In this review, we have discussed current advancements in different types of 3D printed sorbents, production methods, and their applications in the field of bioanalytical sample preparation.
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Affiliation(s)
- Nasir Khan
- National Institute of Pharmaceutical Education and Research-Ahmedabad (NIPER-A), An Institute of National Importance, Department of Pharmaceuticals, Ministry of Chemicals and Fertilizers, Government of India, Gandhinagar, Gujarat, India
| | - Pinaki Sengupta
- National Institute of Pharmaceutical Education and Research-Ahmedabad (NIPER-A), An Institute of National Importance, Department of Pharmaceuticals, Ministry of Chemicals and Fertilizers, Government of India, Gandhinagar, Gujarat, India
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2
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Zoratto S, Heuser T, Friedbacher G, Pletzenauer R, Graninger M, Marchetti-Deschmann M, Weiss VU. Adeno-Associated Virus-like Particles' Response to pH Changes as Revealed by nES-DMA. Viruses 2023; 15:1361. [PMID: 37376661 DOI: 10.3390/v15061361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 05/29/2023] [Accepted: 06/08/2023] [Indexed: 06/29/2023] Open
Abstract
Gas-phase electrophoresis on a nano-Electrospray Gas-phase Electrophoretic Mobility Molecular Analyzer (nES GEMMA) separates single-charged, native analytes according to the surface-dry particle size. A volatile electrolyte, often ammonium acetate, is a prerequisite for electrospraying. Over the years, nES GEMMA has demonstrated its unique capability to investigate (bio-)nanoparticle containing samples in respect to composition, analyte size, size distribution, and particle numbers. Virus-like particles (VLPs), being non-infectious vectors, are often employed for gene therapy applications. Focusing on adeno-associated virus 8 (AAV8) based VLPs, we investigated the response of these bionanoparticles to pH changes via nES GEMMA as ammonium acetate is known to exhibit these changes upon electrospraying. Indeed, slight yet significant differences in VLP diameters in relation to pH changes are found between empty and DNA-cargo-filled assemblies. Additionally, filled VLPs exhibit aggregation in dependence on the applied electrolyte's pH, as corroborated by atomic force microscopy. In contrast, cryogenic transmission electron microscopy did not relate to changes in the overall particle size but in the substantial particle's shape based on cargo conditions. Overall, we conclude that for VLP characterization, the pH of the applied electrolyte solution has to be closely monitored, as variations in pH might account for drastic changes in particles and VLP behavior. Likewise, extrapolation of VLP behavior from empty to filled particles has to be carried out with caution.
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Affiliation(s)
- Samuele Zoratto
- Institute of Chemical Technologies and Analytics, TU Wien, A-1060 Vienna, Austria
| | - Thomas Heuser
- Electron Microscopy Facility, Vienna BioCenter Core Facilities GmbH, A-1030 Vienna, Austria
| | - Gernot Friedbacher
- Institute of Chemical Technologies and Analytics, TU Wien, A-1060 Vienna, Austria
| | - Robert Pletzenauer
- Pharmaceutical Sciences, Baxalta Innovations GmbH (Part of Takeda), A-1221 Vienna, Austria
| | - Michael Graninger
- Pharmaceutical Sciences, Baxalta Innovations GmbH (Part of Takeda), A-1221 Vienna, Austria
| | | | - Victor U Weiss
- Institute of Chemical Technologies and Analytics, TU Wien, A-1060 Vienna, Austria
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Jonas V, Tycova A, Prikryl J, Kotzianova A, Velebny V, Foret F. Nanospray-assisted deposition of silver nanoparticles for mapping of a peptide in nanofibrous layers via surface-enhanced Raman spectrometry. Talanta 2023; 256:124313. [PMID: 36758503 DOI: 10.1016/j.talanta.2023.124313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 01/23/2023] [Accepted: 01/26/2023] [Indexed: 01/30/2023]
Abstract
Surface-enhanced Raman spectrometry (SERS) is a universal detection tool identifying molecules via vibrations of their chemical bonds. Its function requires the close localization of metal nanostructures and the analyte. In this work, we present a lab-made instrumentation for the deposition of silver nanoparticles on a strongly hydrophilic nanofibrous composite via a nanospray for SERS mapping of an incorporated peptide. The nanospray-sample distance was revealed as the most crucial parameter since it directly influences the moisture of the deposited colloid. Residual water was recognized as a sensitivity enhancer. Additionally, we continuously introduced a solution of sodium chloride to the colloid increasing its ionic strength, which formed a more homogeneous profile of the deposit. After the deposition process, the treated sample was scanned via a SERS laser and the collected Raman spectra were transformed into a distribution map of the peptide at a concentration of 5 μg/g.
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Affiliation(s)
- Vladimir Jonas
- Institute of Analytical Chemistry of the CAS, v. v. i., Veveri 967/97, Brno, 602 00, Czech Republic; Faculty of Science, Masaryk University, Kotlarska 2, Brno, 602 00, Czech Republic
| | - Anna Tycova
- Institute of Analytical Chemistry of the CAS, v. v. i., Veveri 967/97, Brno, 602 00, Czech Republic.
| | - Jan Prikryl
- Institute of Analytical Chemistry of the CAS, v. v. i., Veveri 967/97, Brno, 602 00, Czech Republic
| | - Adela Kotzianova
- Contipro a.s., R&D Department, Dolni Dobrouc 401, Dolni Dobrouc, 561 02, Czech Republic
| | - Vladimir Velebny
- Contipro a.s., R&D Department, Dolni Dobrouc 401, Dolni Dobrouc, 561 02, Czech Republic
| | - Frantisek Foret
- Institute of Analytical Chemistry of the CAS, v. v. i., Veveri 967/97, Brno, 602 00, Czech Republic
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Esene JE, Nasman PR, Akuoko Y, Tahir A, Woolley AT. Past, current, and future roles of 3D printing in the development of capillary electrophoresis systems. Trends Analyt Chem 2023; 162:117032. [PMID: 37008739 PMCID: PMC10062378 DOI: 10.1016/j.trac.2023.117032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/30/2023]
Abstract
3D printing, an additive manufacturing technology, has made significant inroads into improving systems for bioanalysis in recent years. This approach is particularly powerful due to the ease and flexibility in rapidly creating novel and complex designs for analytical applications. As such, 3D printing offers an emerging technology for creating systems for electrophoretic analysis. Here, we review 3D printing work on improving and miniaturizing capillary electrophoresis (CE), emphasizing publications from 2019‒2022. We describe enabling uses of 3D printing in interfacing upstream sample preparation or downstream detection with CE. Recent developments in miniaturized CE enabled by 3D printing are also elaborated, including key areas where 3D printing could further improve over the current state-of-the-art. Lastly, we highlight promising future trends for using 3D printing in miniaturizing CE and the significant potential for innovative advancements. 3D printing is poised to play a key role in moving forward miniaturized CE in the coming years.
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Affiliation(s)
- Joule E. Esene
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT 84602, USA
| | - Parker R. Nasman
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT 84602, USA
| | - Yesman Akuoko
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT 84602, USA
| | - Anum Tahir
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT 84602, USA
| | - Adam T. Woolley
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT 84602, USA
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5
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Ryan KA, Bruening ML. Online protein digestion in membranes between capillary electrophoresis and mass spectrometry. Analyst 2023; 148:1611-1619. [PMID: 36912593 DOI: 10.1039/d3an00106g] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/10/2023]
Abstract
This research employs pepsin-containing membranes to digest proteins online after a capillary electrophoresis (CE) separation and prior to tandem mass spectrometry. Proteolysis after the separation allows the peptides from a given protein to enter the mass spectrometer in a single plug. Thus, migration time can serve as an additional criterion for confirming the identification of a peptide. The membrane resides in a sheath-flow electrospray ionization (ESI) source to enable digestion immediately before spray into the mass spectrometer, thus limiting separation of the digested peptides. Using the same membrane, digestion occurred reproducibly during 20 consecutive CE analyses performed over a 10 h period. Additionally, after separating a mixture of six unreduced proteins with CE, online digestion facilitated protein identification with at least 2 identifiable peptides for all the proteins. Sequence coverages were >75% for myoglobin and carbonic anhydrase II but much lower for proteins containing disulfide bonds. Development of methods for efficient separation of reduced proteins or identification of cross-linked peptides should enhance sequence coverages for proteins with disulfide bonds. Migration times for the peptides identified from a specific protein differed by <∼30 s, which allows for rejection of some spurious peptide identifications.
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Affiliation(s)
- Kendall A Ryan
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
| | - Merlin L Bruening
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA. .,Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556, USA
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Václavek T, Foret F. Microfluidic device integrating single-cell extraction and electrical lysis for mass spectrometry detection of intracellular compounds. Electrophoresis 2023; 44:313-322. [PMID: 35315940 DOI: 10.1002/elps.202100379] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Revised: 01/26/2022] [Accepted: 01/28/2022] [Indexed: 02/01/2023]
Abstract
Analysis of cellular composition and metabolism at a single-cell resolution allows gaining more information about complex relationships of cells within tissues or whole living organisms by resolving the variance stemming from the cellular heterogeneity. Mass spectrometry (MS) is a perfect analytical tool satisfying the demanding requirements of detecting and identifying compounds present in such ultralow-volume samples of high chemical complexity. However, the method of sampling and sample ionization is crucial in obtaining relevant information. In this work, we present a microfluidic sampling platform that integrates single-cell extraction from MS-incompatible media with electrical cell lysis and nanoESI-MS analysis of human erythrocytes. Hemoglobin alpha and beta chains (300 amol/cell) were successfully identified in mass spectra of single-erythrocyte lysates.
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Affiliation(s)
- Tomáš Václavek
- Department of Bioanalytical Instrumentation, Institute of Analytical Chemistry of the CAS, Brno, Czech Republic.,Department of Biochemistry, Masaryk University, Brno, Czech Republic
| | - František Foret
- Department of Bioanalytical Instrumentation, Institute of Analytical Chemistry of the CAS, Brno, Czech Republic
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7
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Steinberger S, Karuthedom George S, Lauková L, Weiss R, Tripisciano C, Marchetti-Deschmann M, Weber V, Allmaier G, Weiss VU. Targeting the Structural Integrity of Extracellular Vesicles via Nano Electrospray Gas-Phase Electrophoretic Mobility Molecular Analysis (nES GEMMA). MEMBRANES 2022; 12:872. [PMID: 36135891 PMCID: PMC9501092 DOI: 10.3390/membranes12090872] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Revised: 08/26/2022] [Accepted: 08/27/2022] [Indexed: 06/16/2023]
Abstract
Extracellular vesicles (EVs) are in the scientific spotlight due to their potential application in the medical field, ranging from medical diagnosis to therapy. These applications rely on EV stability during isolation and purification-ideally, these steps should not impact vesicle integrity. In this context, we investigated EV stability and particle numbers via nano electrospray gas-phase electrophoretic mobility molecular analysis (nES GEMMA) and nanoparticle tracking analysis (NTA). In nES GEMMA, native, surface-dry analytes are separated in the gas-phase according to the particle size. Besides information on size and particle heterogeneity, particle number concentrations are obtained in accordance with recommendations of the European Commission for nanoparticle characterization (2011/696/EU, 18 October 2011). Likewise, and in contrast to NTA, nES GEMMA enables detection of co-purified proteins. On the other hand, NTA, yielding data on hydrodynamic size distributions, is able to relate particle concentrations, omitting electrolyte exchange (and resulting EV loss), which is prerequisite for nES GEMMA. Focusing on EVs of different origin, we compared vesicles concentrations and stability, especially after electrolyte exchange and size exclusion chromatography (SEC). Co-isolated proteins were detected in most samples, and the vesicle amount varied in dependence on the EV source. We found that depletion of co-purified proteins was achievable via SEC, but was associated with a loss of EVs and-most importantly-with decreased vesicle stability, as detected via a reduced nES GEMMA measurement repeatability. Ultimately, we propose the repeatability of nES GEMMA to yield information on EV stability, and, as a result, we propose that nES GEMMA can yield additional valuable information in EV research.
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Affiliation(s)
| | - Sobha Karuthedom George
- Center for Biomedical Technology, Department for Biomedical Research, University for Continuing Education Krems, 3500 Krems, Austria
| | - Lucia Lauková
- Center for Biomedical Technology, Department for Biomedical Research, University for Continuing Education Krems, 3500 Krems, Austria
| | - René Weiss
- Center for Biomedical Technology, Department for Biomedical Research, University for Continuing Education Krems, 3500 Krems, Austria
| | - Carla Tripisciano
- Center for Biomedical Technology, Department for Biomedical Research, University for Continuing Education Krems, 3500 Krems, Austria
| | | | - Viktoria Weber
- Center for Biomedical Technology, Department for Biomedical Research, University for Continuing Education Krems, 3500 Krems, Austria
| | - Günter Allmaier
- Institute of Chemical Technologies and Analytics, TU Wien, 1060 Vienna, Austria
| | - Victor U. Weiss
- Institute of Chemical Technologies and Analytics, TU Wien, 1060 Vienna, Austria
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8
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Jiang LX, Plath LD, Halim MA, Friedrich S, Bier ME. Anatomy of Protein Electrospray Ionization Mass Spectra by Superconducting Tunnel Junction Mass and Energy Spectrometry. Anal Chem 2022; 94:5284-5292. [PMID: 35315644 DOI: 10.1021/acs.analchem.1c05074] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Cryogenic superconducting tunnel junction (STJ) detectors have the advantage of single-particle sensitivity, high quantum efficiency, low noise, and the ability to detect the time and relative impact energy of deposited ions. This makes them attractive for use in mass spectrometry (MS) and as a form of energy spectrometry. STJ cryodetectors have been coupled to time-of-flight (TOF) mass spectrometers equipped with a matrix-assisted laser desorption ionization (MALDI) source and to an electrospray ionization (ESI) TOF mass spectrometer. Here, a lab-made linear quadrupole ion trap (LIT) mass spectrometer system was coupled to an ESI source and a 16-channel Nb-STJ array with improved readout electronics. The goal was to investigate fundamentals of ESI-generated protein ions by further exploiting the advantage of resolving these ions in a third dimension of the relative energy deposited into the STJs. The proteins equine cytochrome c, bovine carbonic anhydrase, bovine serum albumin, and murine immunoglobulin G were studied using this ESI-LIT-STJ-MS instrument. Multiply charged monomers, multimers, and fragments from metastable ions were resolved from monomer peaks by differences in ion deposition energy even when these ions have the same mass-to-charge ratio as the corresponding monomer. The determination of a fragment mass from metastable decomposition is accomplished without knowing the charge state of the fragment. The average charge state of the multimers is reduced with each addition of a protein which is presumed to be a direct reflection of the surface area available for charging. Multiply charged in-source fragments have also been observed and distinguished in the mass spectrum of carbonic anhydrase by using the differences in the energy deposited in the STJs.
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Affiliation(s)
- Li-Xue Jiang
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213-2683, United States
| | - Logan D Plath
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213-2683, United States
| | - Mohammad A Halim
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213-2683, United States
| | - Stephan Friedrich
- Nuclear and Chemical Sciences Division, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Mark E Bier
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213-2683, United States
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Huge BJ, Young K, Kerr C, Champion MM, Dovichi NJ. 3-D printed injection system for capillary electrophoresis. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2022; 14:1163-1168. [PMID: 35254370 PMCID: PMC8934206 DOI: 10.1039/d2ay00075j] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Commercial systems for capillary electrophoresis are designed for the unattended analysis of several samples, and are usually large, complex, and expensive. We report a compact system for manual injection of a single sample in capillary electrophoresis, which is ideal for method development and for student training. The injector consists of two parts that are manufactured by three-dimensional printing (STL and STEP files are included as ESI). One part is immobile and holds an electrode for powering electrophoresis and a gas line for pressurized injection and pumping fluids through the capillary. The second part is removable and is used to hold washing solutions, separation electrolyte, or sample. Conventional machining is used to tap holes to hold the electrode, separation capillary, gas line, and safety interlock. The system is used for either pressure or electrokinetic sample injection, and can be used to pump fluids through the capillary for changing background electrolytes and reconditioning the capillary between runs. We coupled the injection system to our high-dynamic range laser-induced fluorescence detector and evaluated the system by performing capillary zone electrophoresis on solutions of fluorescein. Electrokinetic injection produced a linear response across five orders of magnitude dynamic range (slope of the log-log calibration curve was 1.02), concentration detection limits of 5 pM, and mass detection limits of 1 zmol. Pressure injection produced a linear response across at least four orders of magnitude (slope of the log-log calibration curve was 0.92), concentration detection limits of 2 pM, and mass detection limits of 10 zmol.
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Affiliation(s)
- Bonnie Jaskowski Huge
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
| | - Kevin Young
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
| | - Caitlin Kerr
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
| | - Matthew M Champion
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
- Berthiaume Institute for Precision Health, University of Notre Dame, Notre Dame, IN 46556, USA
| | - Norman J Dovichi
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
- Berthiaume Institute for Precision Health, University of Notre Dame, Notre Dame, IN 46556, USA
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10
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Balantič K, Weiss VU, Allmaier G, Kramar P. Calcium ion effect on phospholipid bilayers as cell membrane analogues. Bioelectrochemistry 2021; 143:107988. [PMID: 34763170 DOI: 10.1016/j.bioelechem.2021.107988] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Revised: 09/22/2021] [Accepted: 10/23/2021] [Indexed: 12/14/2022]
Abstract
Ion attachment can modify stability and structure of phospholipid bilayers. Of particular importance is the interaction of phospholipids with divalent cations, such as calcium ions playing an important role in numerous cellular processes. The aim of our study was to determine effects of calcium ions on phospholipid membranes employing two cell membrane analogues, liposomes and planar lipid bilayers, and for the first time the combination of two instrumental setups: gas-phase electrophoresis (nES GEMMA instrumentation) and electrical (capacitance and resistance) measurements. Liposomes and planar lipid bilayers consisted of phosphatidylcholine, cholesterol and phosphatidylethanolamine. Liposomes were prepared from dried lipid films via hydration while planar lipid bilayers were formed using a Mueller-Rudin method. Calcium ions were added to membranes from higher concentrated stock solutions. Changes in phospholipid bilayer properties due to calcium presence were observed for both studied cell membrane analogues. Changes in liposome size were observed, which might either be related to tighter packing of phospholipids in the bilayer or local distortions of the membrane. Likewise, a measurable change in planar lipid bilayer resistance and capacitance was observed in the presence of calcium ions, which can be due to an increased rigidity and tighter packing of the lipid molecules in the bilayer.
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Affiliation(s)
- Katja Balantič
- University of Ljubljana, Faculty of Electrical Engineering, Slovenia
| | - Victor U Weiss
- Institute of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna, Austria
| | - Günter Allmaier
- Institute of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna, Austria
| | - Peter Kramar
- University of Ljubljana, Faculty of Electrical Engineering, Slovenia.
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A possible role of gas-phase electrophoretic mobility molecular analysis (nES GEMMA) in extracellular vesicle research. Anal Bioanal Chem 2021; 413:7341-7352. [PMID: 34622320 PMCID: PMC8626398 DOI: 10.1007/s00216-021-03692-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 09/21/2021] [Accepted: 09/23/2021] [Indexed: 12/02/2022]
Abstract
The emerging role of extracellular vesicles (EVs) as biomarkers and their envisioned therapeutic use require advanced techniques for their detailed characterization. In this context, we investigated gas-phase electrophoresis on a nano electrospray gas-phase electrophoretic mobility molecular analyzer (nES GEMMA, aka nES differential mobility analyzer, nES DMA) as an alternative to standard analytical techniques. In gas-phase electrophoresis, single-charged, surface-dry, native, polydisperse, and aerosolized analytes, e.g., proteins or bio-nanoparticles, are separated according to their electrophoretic mobility diameter, i.e., globular size. Subsequently, monodisperse particles are counted after a nucleation step in a supersaturated atmosphere as they pass a focused laser beam. Hence, particle number concentrations are obtained in accordance with recommendations of the European Commission for nanoparticle characterization (2011/696/EU from October 18th, 2011). Smaller sample constituents (e.g., co-purified proteins) can be detected next to larger ones (e.g., vesicles). Focusing on platelet-derived EVs, we compared different vesicle isolation techniques. In all cases, nanoparticle tracking analysis (NTA) confirmed the presence of vesicles. However, nES GEMMA often revealed a significant co-purification of proteins from the sample matrix, precluding gas-phase electrophoresis of less-diluted samples containing higher vesicle concentrations. Therefore, mainly peaks in the protein size range were detected. Mass spectrometry revealed that these main contaminants belonged to the group of globulins and coagulation-related components. An additional size exclusion chromatography (SEC) step enabled the depletion of co-purified, proteinaceous matrix components, while a label-free quantitative proteomics approach revealed no significant differences in the detected EV core proteome. Hence, the future in-depth analysis of EVs via gas-phase electrophoresis appears feasible.
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12
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Zoratto S, Weiss VU, van der Horst J, Commandeur J, Buengener C, Foettinger‐Vacha A, Pletzenauer R, Graninger M, Allmaier G. Molecular weight determination of adeno-associate virus serotype 8 virus-like particle either carrying or lacking genome via native nES gas-phase electrophoretic molecular mobility analysis and nESI QRTOF mass spectrometry. JOURNAL OF MASS SPECTROMETRY : JMS 2021; 56:e4786. [PMID: 34608711 PMCID: PMC9285973 DOI: 10.1002/jms.4786] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/19/2021] [Accepted: 09/13/2021] [Indexed: 06/13/2023]
Abstract
Virus-like particles (VLPs) are proteinaceous shells derived from viruses lacking any viral genomic material. Adeno-associated virus (AAV) is a non-enveloped icosahedral virus used as VLP delivery system in gene therapy (GT). Its success as vehicle for GT is due to its selective tropism, high level of transduction, and low immunogenicity. In this study, two preparations of AAV serotype 8 (AAV8) VLPs either carrying or lacking completely genomic cargo (i.e., non-viral ssDNA) have been investigated by means of a native nano-electrospray gas-phase electrophoretic mobility molecular analyzer (GEMMA) (native nES GEMMA) and native nano-electrospray ionization quadrupole reflectron time-of-flight mass spectrometry (MS) (native nESI QRTOF MS). nES GEMMA is based on electrophoretic mobility principles: single-charge nanoparticles (NPs), that is, AAV8 particle, are separated in a laminar sheath flow of dry, particle-free air and a tunable orthogonal electric field. Thus, the electrophoretic mobility diameter (EMD) of a bio-NP (i.e., diameter of globular nano-objects) is obtained at atmospheric pressure, which can be converted into its MW based on a correlation. First is the native nESI QRTOF. MS's goal is to keep the native biological conformation of an analyte during the passage into the vacuum. Subsequently, highly accurate MW values are obtained from multiple-charged species after deconvolution. However, once applied to the analysis of megadalton species, native MS is challenging and requires customized instrumental modifications not readily available on standard devices. Hence, the analysis of AAV8 VLPs via native MS in our hands did not produce a defined charge state assignment, that is, charge deconvolution for exact MW determination was not possible. Nonetheless, the method we present is capable to estimate the MW of VLPs by combining the results from native nES GEMMA and native ESI QRTOF MS. In detail, our findings show a MW of 3.7 and 5.0 MDa for AAV8 VLPs either lacking or carrying an engineered genome, respectively.
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Affiliation(s)
- Samuele Zoratto
- Institute of Chemical Technologies and AnalyticsTU Wien (Vienna University of Technology)ViennaAustria
| | - Victor U. Weiss
- Institute of Chemical Technologies and AnalyticsTU Wien (Vienna University of Technology)ViennaAustria
| | | | | | - Carsten Buengener
- Pharmaceutical SciencesBaxalta Innovations (part of Takeda)ViennaAustria
| | | | - Robert Pletzenauer
- Pharmaceutical SciencesBaxalta Innovations (part of Takeda)ViennaAustria
| | - Michael Graninger
- Pharmaceutical SciencesBaxalta Innovations (part of Takeda)ViennaAustria
| | - Guenter Allmaier
- Institute of Chemical Technologies and AnalyticsTU Wien (Vienna University of Technology)ViennaAustria
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13
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Zoratto S, Weiss VU, Friedbacher G, Buengener C, Pletzenauer R, Foettinger-Vacha A, Graninger M, Allmaier G. Adeno-associated Virus Virus-like Particle Characterization via Orthogonal Methods: Nanoelectrospray Differential Mobility Analysis, Asymmetric Flow Field-Flow Fractionation, and Atomic Force Microscopy. ACS OMEGA 2021; 6:16428-16437. [PMID: 34235314 PMCID: PMC8246466 DOI: 10.1021/acsomega.1c01443] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Accepted: 05/27/2021] [Indexed: 05/30/2023]
Abstract
Adeno-associated virus (AAV)-based virus-like particles (VLPs) are thriving vectors of choice in the biopharmaceutical field of gene therapy. Here, a method to investigate purified AAV serotype 8 (AAV8) batches via a nanoelectrospray gas-phase mobility molecular analyzer (nES GEMMA), also known as an nES differential mobility analyzer, is presented. Indeed, due to AAV's double-digit nanometer scale, nES GEMMA is an excellently suited technique to determine the surface-dry particle size termed electrophoretic mobility diameter of such VLPs in their native state at atmospheric pressure and with particle-number-based detection. Moreover, asymmetric flow field-flow fractionation (AF4, also known as AFFFF) and atomic force microscopy (AFM) techniques were employed as orthogonal techniques for VLP characterization. In addition, AF4 was implemented to size-separate as well as to enrich and collect fractions of AAV8 VLPs after inducing analyte aggregation in the liquid phase. Bionanoparticle aggregation was achieved by a combination of heat and shear stress. These fractions were later analyzed with nES GEMMA (in the gas phase) and AFM (on a solid surface). Both techniques confirm the presence of dimers, trimers, and putative VLP oligomers. Last, AFM reveals even larger AAV8 VLP aggregates, which were not detectable by nES GEMMA because their heterogeneity combined with low abundance was below the limit of detection of the instrument. Hence, the combination of the employed orthogonal sizing methods with the separation technique AF4 allow a comprehensive characterization of AAV8 VLPs applied as vectors.
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Affiliation(s)
- Samuele Zoratto
- Institute
of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna A-1060, Austria
| | - Victor U. Weiss
- Institute
of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna A-1060, Austria
| | - Gernot Friedbacher
- Institute
of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna A-1060, Austria
| | - Carsten Buengener
- Pharmaceutical
Sciences, Baxalta Innovations (part of Takeda), Vienna A-1221, Austria
| | - Robert Pletzenauer
- Pharmaceutical
Sciences, Baxalta Innovations (part of Takeda), Vienna A-1221, Austria
| | - Alexandra Foettinger-Vacha
- Institute
of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna A-1060, Austria
| | - Michael Graninger
- Pharmaceutical
Sciences, Baxalta Innovations (part of Takeda), Vienna A-1221, Austria
| | - Guenter Allmaier
- Institute
of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna A-1060, Austria
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14
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Grajewski M, Hermann M, Oleschuk R, Verpoorte E, Salentijn G. Leveraging 3D printing to enhance mass spectrometry: A review. Anal Chim Acta 2021; 1166:338332. [DOI: 10.1016/j.aca.2021.338332] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 02/12/2021] [Accepted: 02/15/2021] [Indexed: 12/11/2022]
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15
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Voráčová I, Přikryl J, Novotný J, Datinská V, Yang J, Astier Y, Foret F. 3D printed device for epitachophoresis. Anal Chim Acta 2021; 1154:338246. [PMID: 33736813 DOI: 10.1016/j.aca.2021.338246] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 01/14/2021] [Accepted: 01/19/2021] [Indexed: 10/22/2022]
Abstract
Polyacrylamide or agarose gels are the most frequently used sieving and stabilizing media in slab gel electrophoresis. Recently, we have introduced a new electrophoretic technique for concentration/separation of milliliter sample volumes. In this technique, the gel is used primarily as an anticonvection media eliminating liquid flow during the electromigration. While serving well for the liquid stabilization, the gels can undergo deformation when exposed to a discontinuous electrolyte buffer system used in epitachophoresis. In this work, we have explored 3D printing to form rigid stabilizing manifolds to minimize liquid flow during the epitachophoresis run. The whole device was printed using the stereolithography technique from a low water-absorbing resin. The stabilizing manifold, serving as the gel substitute, was printed as a replaceable composite structure preventing electrolyte mixing during the separation. Different geometries of the 3D printed stabilizing manifolds were tested for use in concentrating ionic sample components without spatial separation. The presented device can focus analytes from 3 or 4 mL of the sample to 150 μL or less, depending on the collection cup size. With the 150 μL collection cup, this represents the enrichment factor from 20 to 27. The time of concentration was from 15 to 25 min, depending on stabilization media and power used.
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Affiliation(s)
- Ivona Voráčová
- Czech Academy of Sciences, Institute of Analytical Chemistry, Brno 602 00, Czech Republic.
| | - Jan Přikryl
- Czech Academy of Sciences, Institute of Analytical Chemistry, Brno 602 00, Czech Republic
| | - Jakub Novotný
- Czech Academy of Sciences, Institute of Analytical Chemistry, Brno 602 00, Czech Republic
| | - Vladimíra Datinská
- Roche Sequencing Solution, Incorporated Pleasanton, California, 94588, United States
| | - Jaeyoung Yang
- Roche Sequencing Solution, Incorporated Pleasanton, California, 94588, United States
| | - Yann Astier
- Roche Sequencing Solution, Incorporated Pleasanton, California, 94588, United States
| | - František Foret
- Czech Academy of Sciences, Institute of Analytical Chemistry, Brno 602 00, Czech Republic; CEITEC, Masaryk University, Brno 601 77, Czech Republic
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16
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Guillén-Alonso H, Rosas-Román I, Winkler R. The emerging role of 3D-printing in ion mobility spectrometry and mass spectrometry. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2021; 13:852-861. [PMID: 33576357 DOI: 10.1039/d0ay02290j] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
3D-printing is revolutionizing the rapid prototyping in analytical chemistry. In the last few years, we observed the development of 3D-printed components for ion studies, such as ion sources, ion transfer and ion mobility spectrometry (IMS) devices. Often, 3D-printed gadgets add functions to existing mass spectrometry (MS) systems. Custom adapters improve the sensibility for coupling with ambient ionization and upstream chromatography methods, and sample preparation units optimize the following MS analyses. Besides, 3D-printer parts are suitable for constructing custom analytical robots and mass imaging systems. Some of those assemblies implement new concepts and are commercially not available. An essential aspect of using 3D-printing is the fast turnover of design improvements, which is motivated by permissive licenses. The easy reproducibility and exchange of ideas lead to a community-driven development, which is accompanied by economic advantages for public research and education.
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17
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Davis JJ, Foster SW, Grinias JP. Low-cost and open-source strategies for chemical separations. J Chromatogr A 2021; 1638:461820. [PMID: 33453654 PMCID: PMC7870555 DOI: 10.1016/j.chroma.2020.461820] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 12/12/2020] [Accepted: 12/14/2020] [Indexed: 12/18/2022]
Abstract
In recent years, a trend toward utilizing open access resources for laboratory research has begun. Open-source design strategies for scientific hardware rely upon the use of widely available parts, especially those that can be directly printed using additive manufacturing techniques and electronic components that can be connected to low-cost microcontrollers. Open-source software eliminates the need for expensive commercial licenses and provides the opportunity to design programs for specific needs. In this review, the impact of the "open-source movement" within the field of chemical separations is described, primarily through a comprehensive look at research in this area over the past five years. Topics that are covered include general laboratory equipment, sample preparation techniques, separations-based analysis, detection strategies, electronic system control, and software for data processing. Remaining hurdles and possible opportunities for further adoption of open-source approaches in the context of these separations-related topics are also discussed.
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Affiliation(s)
- Joshua J Davis
- Department of Chemistry & Biochemistry, Rowan University, Glassboro, NJ 08028, United States
| | - Samuel W Foster
- Department of Chemistry & Biochemistry, Rowan University, Glassboro, NJ 08028, United States
| | - James P Grinias
- Department of Chemistry & Biochemistry, Rowan University, Glassboro, NJ 08028, United States.
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18
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Řemínek R, Foret F, Chung DS. Application of capillary electrophoresis-nano-electrospray ionization-mass spectrometry for the determination of N-nitrosodimethylamine in pharmaceuticals. Electrophoresis 2021; 42:334-341. [PMID: 33368407 DOI: 10.1002/elps.202000303] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Revised: 12/10/2020] [Accepted: 12/11/2020] [Indexed: 11/09/2022]
Abstract
After a presence of highly hepatotoxic and potentially carcinogenic N-nitrosodimethylamine was detected in certain lots of sartan, ranitidine, metformin, and other pharmaceuticals, local regulatory authorities issued recalls of suspected products, and concerns of the pharmacotherapy safety were widely discussed. Since then, testing of a representative sample of each produced lot of these pharmaceuticals is required as a part of quality control processes. Hence, an interface-free CE-nanoESI system coupled with MS detection was employed for the development of a simple and economical method for quantitative detection of this contaminant in the valsartan drug substances and finished formulations used as model matrices. In this arrangement, a fused-silica capillary was used as both a separation column and a nanoESI emitter providing high ionization efficiency and sensitivity. The optimized procedure was found to have sufficient selectivity, linearity, accuracy, and precision. The established LOD and LOQ values were 0.3 and 1.0 ng/mL, respectively. The practical applicability of the method was tested by analyses of commercially available Valsacor® tablets. The results obtained prove that the developed procedure represents a promising alternative to currently available GC- and LC-based methods. Furthermore, after an adjustment of the separation conditions, the CE-nanoESI/MS system can be conceptually used for the determination of NDMA in other suspected pharmaceuticals.
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Affiliation(s)
- Roman Řemínek
- Institute of Analytical Chemistry of the Czech Academy of Sciences, v. v. i., Brno, Czech Republic
| | - František Foret
- Institute of Analytical Chemistry of the Czech Academy of Sciences, v. v. i., Brno, Czech Republic
| | - Doo Soo Chung
- Department of Chemistry, Seoul National University, Seoul, Korea
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19
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N-terminal VP1 Truncations Favor T = 1 Norovirus-Like Particles. Vaccines (Basel) 2020; 9:vaccines9010008. [PMID: 33374273 PMCID: PMC7824077 DOI: 10.3390/vaccines9010008] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 12/18/2020] [Accepted: 12/21/2020] [Indexed: 12/20/2022] Open
Abstract
Noroviruses cause immense sporadic gastroenteritis outbreaks worldwide. Emerging genotypes, which are divided based on the sequence of the major capsid protein VP1, further enhance this public threat. Self-assembling properties of the human norovirus major capsid protein VP1 are crucial for using virus-like particles (VLPs) for vaccine development. However, there is no vaccine available yet. Here, VLPs from different variants produced in insect cells were characterized in detail using a set of biophysical and structural tools. We used native mass spectrometry, gas-phase electrophoretic mobility molecular analysis, and proteomics to get clear insights into particle size, structure, and composition, as well as stability. Generally, noroviruses have been known to form mainly T = 3 particles. Importantly, we identified a major truncation in the capsid proteins as a likely cause for the formation of T = 1 particles. For vaccine development, particle production needs to be a reproducible, reliable process. Understanding the underlying processes in capsid size variation will help to produce particles of a defined capsid size presenting antigens consistent with intact virions. Next to vaccine production itself, this would be immensely beneficial for bio-/nano-technological approaches using viral particles as carriers or triggers for immunological reactions.
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20
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Tycova A, Prikryl J, Kotzianova A, Datinska V, Velebny V, Foret F. Electrospray: More than just an ionization source. Electrophoresis 2020; 42:103-121. [PMID: 32841405 DOI: 10.1002/elps.202000191] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 08/07/2020] [Accepted: 08/11/2020] [Indexed: 12/17/2022]
Abstract
Electrospraying (ES) is a potential-driven process of liquid atomization, which is employed in the field of analytical chemistry, particularly as an ionization technique for mass spectrometric analyses of biomolecules. In this review, we demonstrate the extraordinary versatility of the electrospray by overviewing the specifics and advanced applications of ES-based processing of low molecular mass compounds, biomolecules, polymers, nanoparticles, and cells. Thus, under suitable experimental conditions, ES can be used as a powerful tool for highly controlled deposition of homogeneous films or various patterns, which may sometimes even be organized into 3D structures. We also emphasize its capacity to produce composite materials including encapsulation systems and polymeric fibers. Further, we present several other, less common ES-based applications. This review provides an insight into the remarkable potential of ES, which can be very useful in the designing of innovative and unique strategies.
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Affiliation(s)
- Anna Tycova
- Institute of Analytical Chemistry of the CAS, Brno, 602 00, Czech Republic
| | - Jan Prikryl
- Institute of Analytical Chemistry of the CAS, Brno, 602 00, Czech Republic
| | - Adela Kotzianova
- R&D Department, Contipro a.s., Dolni Dobrouc, 561 02, Czech Republic
| | - Vladimira Datinska
- Institute of Analytical Chemistry of the CAS, Brno, 602 00, Czech Republic
| | - Vladimir Velebny
- R&D Department, Contipro a.s., Dolni Dobrouc, 561 02, Czech Republic
| | - Frantisek Foret
- Institute of Analytical Chemistry of the CAS, Brno, 602 00, Czech Republic
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21
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Höcker O, Knierman M, Meixner J, Neusüß C. Two capillary approach for a multifunctional nanoflow sheath liquid interface for capillary electrophoresis-mass spectrometry. Electrophoresis 2020; 42:369-373. [PMID: 32776368 DOI: 10.1002/elps.202000169] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Revised: 07/23/2020] [Accepted: 08/03/2020] [Indexed: 12/18/2022]
Abstract
CE hyphenated to ESI-MS (CE-ESI-MS) is a well-established technique to analyze charged analytes in complex samples. Although various interfaces for CE-MS coupling are commercially available, the development of alternatives which combine sensitivity, simplicity, and robustness remains a topic of research. In this work, a nanoflow sheath liquid CE-MS interface with two movable capillaries inside a glass emitter is described. The setup enables a separation mode and a conditioning mode to guide the separation capillary effluent either into the electrospray or to the waste, respectively. This enables to exclude parts of the analysis from MS detection and unwanted matrix components reaching the mass spectrometer, comparable to divert valves in LC-MS coupling. Also, this function improves the overall robustness of the system by reduction of particles blocking the emitter. Preconditioning with electrospray interfering substances and even the application of coating materials for every analysis is enabled, even while the separation capillary is built into the interface with running electrospray. The functionality is demonstrated by analyses of heavy matrix bioreactor samples. Overall, this innovation offers a more convenient installation of the interface, improved handling with an extended lifetime of the emitter tips and additional functions compared to previous approaches, while keeping the higher sensitivity of nanoflow CE-MS-coupling.
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Affiliation(s)
- Oliver Höcker
- Department of Chemistry, Aalen University, Aalen, Germany
- Instrumental Analytical Chemistry and Centre for Water and Environmental Research (ZWU), Universitätsstraße, University of Duisburg-Essen, Essen, Germany
| | - Mike Knierman
- Laboratory for Experimental Medicine, Lilly Corporate Center, Eli Lilly and Company, Indianapolis, IN, USA
| | - Jens Meixner
- Agilent Technologies R&D and Marketing GmbH & Co. KG, Hewlett-Packard-Straße 8, Waldbronn, Germany
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22
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Sauer F, Sydow C, Trapp O. A robust sheath-flow CE-MS interface for hyphenation with Orbitrap MS. Electrophoresis 2020; 41:1280-1286. [PMID: 32358866 DOI: 10.1002/elps.202000044] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2020] [Revised: 04/21/2020] [Accepted: 04/23/2020] [Indexed: 11/10/2022]
Abstract
The hyphenation of capillary electrophoresis with high-resolution mass spectrometry, such as Orbitrap MS, is of broad interest for the unambiguous and exceptionally sensitive identification of compounds. However, the coupling of these techniques requires a robust ionization interface that does not influence the stability of the separation voltage while coping with oxidation of the emitter tip at large ionization voltages. Herein, we present the design of a sheath-flow CE-ESI-MS interface which combines a robust and easy to operate set-up with high-resolution Orbitrap MS detection. The sheath liquid interface is equipped with a gold coated electrospray emitter which increases the stability and overall lifetime of the system. For the characterization of the interface, the spray stability and durability were investigated in dependence of the sheath-flow rate, electrospray voltage, and additional gold coating. The optimized conditions were applied to a separation of angiotensin II and neurotensin resulting in LODs of 2.4 and 3.5 ng/mL.
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Affiliation(s)
- Fabian Sauer
- Department Chemie, Ludwig-Maximilians-Universität München, München, Germany
| | - Constanze Sydow
- Department Chemie, Ludwig-Maximilians-Universität München, München, Germany
| | - Oliver Trapp
- Department Chemie, Ludwig-Maximilians-Universität München, München, Germany.,Max-Planck-Institute for Astronomy, Heidelberg, Germany
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23
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24
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Weiss VU, Pogan R, Zoratto S, Bond KM, Boulanger P, Jarrold MF, Lyktey N, Pahl D, Puffler N, Schelhaas M, Selivanovitch E, Uetrecht C, Allmaier G. Virus-like particle size and molecular weight/mass determination applying gas-phase electrophoresis (native nES GEMMA). Anal Bioanal Chem 2019; 411:5951-5962. [PMID: 31280479 PMCID: PMC6706367 DOI: 10.1007/s00216-019-01998-6] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2019] [Revised: 05/29/2019] [Accepted: 06/24/2019] [Indexed: 02/04/2023]
Abstract
(Bio-)nanoparticle analysis employing a nano-electrospray gas-phase electrophoretic mobility molecular analyzer (native nES GEMMA) also known as nES differential mobility analyzer (nES DMA) is based on surface-dry analyte separation at ambient pressure. Based on electrophoretic principles, single-charged nanoparticles are separated according to their electrophoretic mobility diameter (EMD) corresponding to the particle size for spherical analytes. Subsequently, it is possible to correlate the (bio-)nanoparticle EMDs to their molecular weight (MW) yielding a corresponding fitted curve for an investigated analyte class. Based on such a correlation, (bio-)nanoparticle MW determination via its EMD within one analyte class is possible. Turning our attention to icosahedral, non-enveloped virus-like particles (VLPs), proteinaceous shells, we set up an EMD/MW correlation. We employed native electrospray ionization mass spectrometry (native ESI MS) to obtain MW values of investigated analytes, where possible, after extensive purification. We experienced difficulties in native ESI MS with time-of-flight (ToF) detection to determine MW due to sample inherent characteristics, which was not the case for charge detection (CDMS). nES GEMMA exceeds CDMS in speed of analysis and is likewise less dependent on sample purity and homogeneity. Hence, gas-phase electrophoresis yields calculated MW values in good approximation even when charge resolution was not obtained in native ESI ToF MS. Therefore, both methods-native nES GEMMA-based MW determination via an analyte class inherent EMD/MW correlation and native ESI MS-in the end relate (bio-)nanoparticle MW values. However, they differ significantly in, e.g., ease of instrument operation, sample and analyte handling, or costs of instrumentation. Graphical abstract ![]()
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Affiliation(s)
- Victor U Weiss
- Institute of Chemical Technologies and Analytics, TU Wien, Getreidemarkt 9/164, 1060, Vienna, Austria.
| | - Ronja Pogan
- Heinrich Pette Institute, Leibniz Institute for Experimental Virology, Martinistraße 52, 20251, Hamburg, Germany.,European XFEL GmbH, Holzkoppel 4, 22869, Schenefeld, Germany
| | - Samuele Zoratto
- Institute of Chemical Technologies and Analytics, TU Wien, Getreidemarkt 9/164, 1060, Vienna, Austria
| | - Kevin M Bond
- Department of Chemistry, Indiana University, 800 E Kirkwood Ave, Bloomington, IN, 47405, USA
| | - Pascale Boulanger
- Institute for Integrative Biology of the Cell, CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198, Gif-sur-Yvette, France
| | - Martin F Jarrold
- Department of Chemistry, Indiana University, 800 E Kirkwood Ave, Bloomington, IN, 47405, USA
| | - Nicholas Lyktey
- Department of Chemistry, Indiana University, 800 E Kirkwood Ave, Bloomington, IN, 47405, USA
| | - Dominik Pahl
- Institute of Cellular Virology, WWU Münster, Von-Esmarch-Str. 56, 48149, Münster, Germany
| | - Nicole Puffler
- Institute of Chemical Technologies and Analytics, TU Wien, Getreidemarkt 9/164, 1060, Vienna, Austria
| | - Mario Schelhaas
- Institute of Cellular Virology, WWU Münster, Von-Esmarch-Str. 56, 48149, Münster, Germany
| | - Ekaterina Selivanovitch
- Department of Chemistry, Indiana University, 800 E Kirkwood Ave, Bloomington, IN, 47405, USA
| | - Charlotte Uetrecht
- Heinrich Pette Institute, Leibniz Institute for Experimental Virology, Martinistraße 52, 20251, Hamburg, Germany.,European XFEL GmbH, Holzkoppel 4, 22869, Schenefeld, Germany
| | - Günter Allmaier
- Institute of Chemical Technologies and Analytics, TU Wien, Getreidemarkt 9/164, 1060, Vienna, Austria
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25
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Weiss VU, Wieland K, Schwaighofer A, Lendl B, Allmaier G. Native Nano-electrospray Differential Mobility Analyzer (nES GEMMA) Enables Size Selection of Liposomal Nanocarriers Combined with Subsequent Direct Spectroscopic Analysis. Anal Chem 2019; 91:3860-3868. [PMID: 30735037 PMCID: PMC6427476 DOI: 10.1021/acs.analchem.8b04252] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
![]()
Gas-phase
electrophoresis employing a nano-electrospray differential
mobility analyzer (nES DMA), aka gas-phase electrophoretic mobility
molecular analyzer (nES GEMMA), enables nanoparticle separation in
the gas-phase according to their surface-dry diameter with number-based
concentration detection. Moreover, particles in the nanometer
size range can be collected after size selection on supporting materials.
It has been shown by subsequent analyses employing orthogonal methods,
for instance, microscopic or antibody-based techniques, that the surface
integrity of collected analytes remains intact. Additionally, native
nES GEMMA demonstrated its applicability for liposome characterization.
Liposomes are nanometer-sized, biodegradable, and rather labile carriers
(nanoobjects) consisting of a lipid bilayer encapsulating an aqueous
lumen. In nutritional and pharmaceutical applications, these vesicles
allow shielded, targeted transport and sustained release of bioactive
cargo material. To date, cargo quantification is based on bulk measurements
after bilayer rupture. In this context, we now compare capillary electrophoresis
and spectroscopic characterization of vesicles in solution (bulk measurements)
to the possibility of spectroscopic investigation of individual, size-separated/collected
liposomes after nES GEMMA. Surface-dried, size-selected vesicles were
collected intact on calcium fluoride (CaF2) substrates
and zinc selenide (ZnSe) prisms, respectively, for subsequent spectroscopic
investigation. Our proof-of-principle study demonstrates that the
off-line hyphenation of gas-phase electrophoresis and confocal Raman
spectroscopy allows detection of isolated, nanometer-sized soft material/objects.
Additionally, atomic force microscopy-infrared spectroscopy (AFM-IR)
as an advanced spectroscopic system was employed to access molecule-specific
information with nanoscale lateral resolution. The off-line hyphenation
of nES GEMMA and AFM-IR is introduced to enable chemical imaging of
single, i.e., individual, liposome particles.
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Affiliation(s)
- Victor U Weiss
- Institute of Chemical Technologies and Analytics , Vienna University of Technology (TU Wien) , A-1060 Vienna , Austria
| | - Karin Wieland
- Institute of Chemical Technologies and Analytics , Vienna University of Technology (TU Wien) , A-1060 Vienna , Austria
| | - Andreas Schwaighofer
- Institute of Chemical Technologies and Analytics , Vienna University of Technology (TU Wien) , A-1060 Vienna , Austria
| | - Bernhard Lendl
- Institute of Chemical Technologies and Analytics , Vienna University of Technology (TU Wien) , A-1060 Vienna , Austria
| | - Guenter Allmaier
- Institute of Chemical Technologies and Analytics , Vienna University of Technology (TU Wien) , A-1060 Vienna , Austria
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26
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Wieland K, Ramer G, Weiss VU, Allmaier G, Lendl B, Centrone A. Nanoscale Chemical Imaging of Individual, Chemotherapeutic Cytarabine-loaded Liposomal Nanocarriers. NANO RESEARCH 2019; 12:10.1007/s12274-018-2202-x. [PMID: 31275527 PMCID: PMC6604632 DOI: 10.1007/s12274-018-2202-x] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2018] [Revised: 05/30/2018] [Accepted: 09/12/2018] [Indexed: 05/05/2023]
Abstract
Dosage of chemotherapeutic drugs is a tradeoff between efficacy and side-effects. Liposomes are nanocarriers that increase therapy efficacy and minimize side-effects by delivering otherwise difficult to administer therapeutics with improved efficiency and selectivity. Still, variabilities in liposome preparation require assessing drug encapsulation efficiency at the single liposome level, an information that, for non-fluorescent therapeutic cargos, is inaccessible due to the minute drug load per liposome. Photothermal induced resonance (PTIR) provides nanoscale compositional specificity, up to now, by leveraging an atomic force microscope (AFM) tip contacting the sample to transduce the sample's photothermal expansion. However, on soft samples (e.g. liposomes) PTIR effectiveness is reduced due to the likelihood of tip-induced sample damage and inefficient AFM transduction. Here, individual liposomes loaded with the chemotherapeutic drug cytarabine are deposited intact from suspension via nES-GEMMA (nano-electrospray gas-phase electrophoretic mobility molecular analysis) collection and characterized at the nanoscale with the chemically-sensitive PTIR method. A new tapping-mode PTIR imaging paradigm based on heterodyne detection is shown to be better adapted to measure soft samples, yielding cytarabine distribution in individual liposomes and enabling classification of empty and drug-loaded liposomes. The measurements highlight PTIR capability to detect ≈ 103 cytarabine molecules (≈ 1.7 zmol) label-free and non-destructively.
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Affiliation(s)
- Karin Wieland
- Institute of Chemical Technologies and Analytics. Research Division Environmental, Process Analytics and Sensors, TU Wien, Vienna 1060, Austria
| | - Georg Ramer
- Center for Nanoscale Science and Technology, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA
- Institute for Research in Electronics and Applied Physics, University of Maryland, College Park, MD 20742, USA
| | - Victor U Weiss
- Institute of Chemical Technologies and Analytics. Research Division Instrumental and Imaging Analytical Chemistry, TU Wien, Vienna 1060, Austria
| | - Guenter Allmaier
- Institute of Chemical Technologies and Analytics. Research Division Instrumental and Imaging Analytical Chemistry, TU Wien, Vienna 1060, Austria
| | - Bernhard Lendl
- Institute of Chemical Technologies and Analytics. Research Division Environmental, Process Analytics and Sensors, TU Wien, Vienna 1060, Austria
| | - Andrea Centrone
- Center for Nanoscale Science and Technology, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA
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Characterization of a nanoflow sheath liquid interface and comparison to a sheath liquid and a sheathless porous-tip interface for CE-ESI-MS in positive and negative ionization. Anal Bioanal Chem 2018; 410:5265-5275. [DOI: 10.1007/s00216-018-1179-3] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Revised: 05/24/2018] [Accepted: 05/30/2018] [Indexed: 01/22/2023]
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28
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Allmaier G, Blaas D, Bliem C, Dechat T, Fedosyuk S, Gösler I, Kowalski H, Weiss VU. Monolithic anion-exchange chromatography yields rhinovirus of high purity. J Virol Methods 2017; 251:15-21. [PMID: 28966037 DOI: 10.1016/j.jviromet.2017.09.027] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2017] [Revised: 09/27/2017] [Accepted: 09/27/2017] [Indexed: 11/26/2022]
Abstract
For vaccine development, 3D-structure determination, direct fluorescent labelling, and numerous other studies, homogeneous virus preparations of high purity are essential. Working with human rhinoviruses (RVs), members of the picornavirus family and the main cause of generally mild respiratory infections, we noticed that our routine preparations appeared highly pure on analysis by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), exclusively showing the four viral capsid proteins (VPs). However, the preparations turned out to contain substantial amounts of contaminating material when analyzed by orthogonal analytical methods including capillary zone electrophoresis, nano electrospray gas-phase electrophoretic mobility molecular analysis (nES GEMMA), and negative stain transmission electron microscopy (TEM). Because these latter analyses are not routine to many laboratories, the above contaminations might remain unnoticed and skew experimental results. By using human rhinovirus serotype A2 (RV-A2) as example we report monolithic anion-exchange chromatography (AEX) as a last polishing step in the purification and demonstrate that it yields infective, highly pure, virus (RV-A2 in the respective fractions was confirmed by peptide mass fingerprinting) devoid of foreign material as judged by the above criteria.
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Affiliation(s)
- Günter Allmaier
- Institute of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna, Austria
| | - Dieter Blaas
- Department of Medical Biochemistry, Medical University of Vienna, Vienna Biocenter, Vienna, Austria
| | - Christina Bliem
- Institute of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna, Austria
| | - Thomas Dechat
- Department of Medical Biochemistry, Medical University of Vienna, Vienna Biocenter, Vienna, Austria
| | - Sofiya Fedosyuk
- Department of Medical Biochemistry, Medical University of Vienna, Vienna Biocenter, Vienna, Austria
| | - Irene Gösler
- Department of Medical Biochemistry, Medical University of Vienna, Vienna Biocenter, Vienna, Austria
| | - Heinrich Kowalski
- Department of Medical Biochemistry, Medical University of Vienna, Vienna Biocenter, Vienna, Austria
| | - Victor U Weiss
- Institute of Chemical Technologies and Analytics, TU Wien (Vienna University of Technology), Vienna, Austria.
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29
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30
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Next-generation capillary electrophoresis–mass spectrometry approaches in metabolomics. Curr Opin Biotechnol 2017; 43:1-7. [DOI: 10.1016/j.copbio.2016.07.002] [Citation(s) in RCA: 84] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2016] [Revised: 06/28/2016] [Accepted: 07/04/2016] [Indexed: 12/14/2022]
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31
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Fichou D, Morlock GE. Open-Source-Based 3D Printing of Thin Silica Gel Layers in Planar Chromatography. Anal Chem 2017; 89:2116-2122. [PMID: 28208299 DOI: 10.1021/acs.analchem.6b04813] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
On the basis of open-source packages, 3D printing of thin silica gel layers is demonstrated as proof-of-principle for use in planar chromatography. A slurry doser was designed to replace the plastic extruder of an open-source Prusa i3 printer. The optimal parameters for 3D printing of layers were studied, and the planar chromatographic separations on these printed layers were successfully demonstrated with a mixture of dyes. The layer printing process was fast. For printing a 0.2 mm layer on a 10 cm × 10 cm format, it took less than 5 min. It was affordable, i.e., the running costs for producing such a plate were less than 0.25 Euro and the investment costs for the modified hardware were 630 Euro. This approach demonstrated not only the potential of the 3D printing environment in planar chromatography but also opened new avenues and new perspectives for tailor-made plates, not only with regard to layer materials and their combinations (gradient plates) but also with regard to different layer shapes and patterns. As such an example, separations on a printed plane layer were compared with those obtained from a printed channeled layer. For the latter, 40 channels were printed in parallel on a 10 cm × 10 cm format for the separation of 40 samples. For producing such a channeled plate, the running costs were below 0.04 Euro and the printing process took only 2 min. All modifications of the device and software were released open-source to encourage reuse and improvements and to stimulate the users to contribute to this technology. By this proof-of-principle, another asset was demonstrated to be integrated into the Office Chromatography concept, in which all relevant steps for online miniaturized planar chromatography are performed by a single device.
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Affiliation(s)
- Dimitri Fichou
- Chair of Food Sciences, Institute of Nutritional Science, and Interdisciplinary Research Center (IFZ), Justus Liebig University Giessen , Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Gertrud E Morlock
- Chair of Food Sciences, Institute of Nutritional Science, and Interdisciplinary Research Center (IFZ), Justus Liebig University Giessen , Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
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32
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Týčová A, Ledvina V, Klepárník K. Recent advances in CE-MS coupling: Instrumentation, methodology, and applications. Electrophoresis 2016; 38:115-134. [DOI: 10.1002/elps.201600366] [Citation(s) in RCA: 76] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2016] [Revised: 08/30/2016] [Accepted: 08/30/2016] [Indexed: 12/17/2022]
Affiliation(s)
- Anna Týčová
- Institute of Analytical Chemistry; Czech Academy of Sciences; Brno Czech Republic
| | - Vojtěch Ledvina
- Institute of Analytical Chemistry; Czech Academy of Sciences; Brno Czech Republic
| | - Karel Klepárník
- Institute of Analytical Chemistry; Czech Academy of Sciences; Brno Czech Republic
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33
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Tycova A, Vido M, Kovarikova P, Foret F. Interface-free capillary electrophoresis-mass spectrometry system with nanospray ionization—Analysis of dexrazoxane in blood plasma. J Chromatogr A 2016; 1466:173-9. [DOI: 10.1016/j.chroma.2016.08.042] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2016] [Revised: 08/16/2016] [Accepted: 08/18/2016] [Indexed: 01/02/2023]
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