1
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Orsi M, Reymond JL. One chiral fingerprint to find them all. J Cheminform 2024; 16:53. [PMID: 38741153 DOI: 10.1186/s13321-024-00849-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Accepted: 04/28/2024] [Indexed: 05/16/2024] Open
Abstract
Molecular fingerprints are indispensable tools in cheminformatics. However, stereochemistry is generally not considered, which is problematic for large molecules which are almost all chiral. Herein we report MAP4C, a chiral version of our previously reported fingerprint MAP4, which lists MinHashes computed from character strings containing the SMILES of all pairs of circular substructures up to a diameter of four bonds and the shortest topological distance between their central atoms. MAP4C includes the Cahn-Ingold-Prelog (CIP) annotation (R, S, r or s) whenever the chiral atom is the center of a circular substructure, a question mark for undefined stereocenters, and double bond cis-trans information if specified. MAP4C performs slightly better than the achiral MAP4, ECFP and AP fingerprints in non-stereoselective virtual screening benchmarks. Furthermore, MAP4C distinguishes between stereoisomers in chiral molecules from small molecule drugs to large natural products and peptides comprising thousands of diastereomers, with a degree of distinction smaller than between structural isomers and proportional to the number of chirality changes. Due to its excellent performance across diverse molecular classes and its ability to handle stereochemistry, MAP4C is recommended as a generally applicable chiral molecular fingerprint. SCIENTIFIC CONTRIBUTION: The ability of our chiral fingerprint MAP4C to handle stereoisomers from small molecules to large natural products and peptides is unprecedented and opens the way for cheminformatics to include stereochemistry as an important molecular parameter across all fields of molecular design.
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Affiliation(s)
- Markus Orsi
- Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, 3012, Bern, Switzerland
| | - Jean-Louis Reymond
- Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, 3012, Bern, Switzerland.
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2
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Mazzotta S, Rositano V, Senaldi L, Bernardi A, Allegrini P, Appendino G. Scalemic natural products. Nat Prod Rep 2023; 40:1647-1671. [PMID: 37439042 DOI: 10.1039/d3np00014a] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/14/2023]
Abstract
Covering: up to the end of 2022The area of scalemic natural products is often enigmatic from a mechanistic standpoint, since low optical purity is observed in compounds having multiple contiguous stereogenic centers resulting from mechanistically distinct biogenetic steps. A scalemic state is rarely the result of a sloppy enzymatic activity, rather resulting from the expression of antipodal enzymes/directing proteins or from the erosion of optical purity by enzymatic or spontaneous reactions. Evidence for these processes is critically reviewed, identifying the mechanisms most often associated to the enzymatic generation of scalemic natural products and also discussing analytical exploitations of natural products' scalemicity.
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Affiliation(s)
- Sarah Mazzotta
- Dipartimento di Chimica, Università degli Studi di Milano, Via Golgi 19, 20133 Milano, Italy
| | - Vincenzo Rositano
- Dipartimento di Chimica, Università degli Studi di Milano, Via Golgi 19, 20133 Milano, Italy
- Indena SpA, Via Don Minzoni 6, 20049 Settala, MI, Italy
| | - Luca Senaldi
- Indena SpA, Via Don Minzoni 6, 20049 Settala, MI, Italy
| | - Anna Bernardi
- Dipartimento di Chimica, Università degli Studi di Milano, Via Golgi 19, 20133 Milano, Italy
| | | | - Giovanni Appendino
- Dipartimento di Scienze del Farmaco, Largo Donegani 2, 28100 Novara, Italy.
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3
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Sun W, Schnell M. Microwave Three-Wave Mixing Spectroscopy of Chiral Molecules in Weakly Bound Complexes. J Phys Chem Lett 2023; 14:7389-7394. [PMID: 37566689 PMCID: PMC10461301 DOI: 10.1021/acs.jpclett.3c01900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 08/09/2023] [Indexed: 08/13/2023]
Abstract
Since the first experimental implementation in 2013, microwave three-wave mixing has emerged as a robust spectroscopic approach for analyzing and controlling chiral molecules in the gas phase. This resonant, coherent, and nonlinear technique is based on the three-dimensional light-matter interaction in the electric dipole approximation, allowing for isomer- and conformer-selective chiral analysis with high resolution. Here we demonstrate the utility of microwave three-wave mixing for analyzing a molecular complex, limonene-H2O, which serves as a compelling example of addressing its potential to improve the chiral sensitivity for only weakly polar chiral molecules. The use of molecular complexes can also extend the applicability of microwave three-wave mixing to chiral systems that are not in the C1 point group.
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Affiliation(s)
- Wenhao Sun
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Melanie Schnell
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
- Institute
of Physical Chemistry, Christian-Albrechts-Universität
zu Kiel, Max-Eyth-Strasse
1, 24118 Kiel, Germany
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4
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Spandana T, Goli VV, Gurupadayya B. In vitro study and pharmacokinetic evaluation of sitagliptin phosphate enantiomers in rat plasma. Bioanalysis 2023; 15:1033-1047. [PMID: 37431826 DOI: 10.4155/bio-2023-0084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/12/2023] Open
Abstract
Background: A chiral HPLC technique was developed to determine sitagliptin phosphate enantiomers in rat plasma in compliance with US FDA regulations. Methods & results: The technique used a Phenomenex column with a mobile phase consisting of a 60:35:5 (v/v/v) blend of pH4, 10-mM ammonium acetate buffer, methanol and 0.1% formic acid in Millipore water. The precision for both (R) and (S) sitagliptin phosphate varied between 0.246 and 1.246%, while the accuracy was 99.6-100.1%. A glucose uptake assay was used to assess enantiomers in 3T3-L1 cell lines through flow cytometry. Conclusion: Investigation of the pharmacokinetic impacts of sitagliptin phosphate racemic enantiomers in rat plasma revealed notable contrasts in R and S enantiomers in female albino Wistar rats, suggesting enantioselectivity for sitagliptin phosphate.
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Affiliation(s)
- Tatineni Spandana
- Department of Pharmaceutical Chemistry, JSS Academy of Higher Education & Research, Mysore, 570015, India
| | - Veera Vn Goli
- Department of Pharmaceutical Chemistry, JSS Academy of Higher Education & Research, Mysore, 570015, India
| | - Bannimath Gurupadayya
- Department of Pharmaceutical Chemistry, JSS Academy of Higher Education & Research, Mysore, 570015, India
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5
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Liu X, Li J, Zhao R, Zhang Y, Dong Y. Enhanced chirality in a dielectric metasurface without breaking symmetry. Phys Chem Chem Phys 2023; 25:2050-2055. [PMID: 36546559 DOI: 10.1039/d2cp04833g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
We propose a dielectric metasurface constructed by quadrumer silicon nano-disks with crossed slots in the middle. This metasurface can support the excitation of bound states in the continuum which are closely related to the toroidal dipole resonance. After introducing chiral enantiomers with weak chirality into the surrounding medium, due to the bound states in the continuum, the chiroptical effect of the metasurface can be greatly enhanced. In particular, this metasurface breaks neither the in-plane nor out-plane symmetry, which has lower requirements of spatial processing capabilities. The proposed metasurface can be used in the trace analysis of chiral enantiomers and may lead to potential applications for tailored phase control and ultra-integrated molar chiral sensing metadevices.
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Affiliation(s)
- Xingguang Liu
- School of Physics, Harbin Institute of Technology, Harbin 150001, China. .,Postdoctoral Research Station for Electronic Science and Technology, Harbin Institute of Technology, Harbin 150001, China
| | - Junqing Li
- School of Physics, Harbin Institute of Technology, Harbin 150001, China.
| | - Rui Zhao
- School of Physics, Harbin Institute of Technology, Harbin 150001, China.
| | - Yingjie Zhang
- School of Physics, Harbin Institute of Technology, Harbin 150001, China.
| | - Yongkang Dong
- National Key Laboratory of Science and Technology on Tunable Laser, Harbin Institute of Technology, Harbin 150001, China
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6
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Regional Segregation of Chiral Alcohol on Polyoxotitanate Cluster. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.116239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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7
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Peluso P, Chankvetadze B. Recognition in the Domain of Molecular Chirality: From Noncovalent Interactions to Separation of Enantiomers. Chem Rev 2022; 122:13235-13400. [PMID: 35917234 DOI: 10.1021/acs.chemrev.1c00846] [Citation(s) in RCA: 57] [Impact Index Per Article: 28.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
It is not a coincidence that both chirality and noncovalent interactions are ubiquitous in nature and synthetic molecular systems. Noncovalent interactivity between chiral molecules underlies enantioselective recognition as a fundamental phenomenon regulating life and human activities. Thus, noncovalent interactions represent the narrative thread of a fascinating story which goes across several disciplines of medical, chemical, physical, biological, and other natural sciences. This review has been conceived with the awareness that a modern attitude toward molecular chirality and its consequences needs to be founded on multidisciplinary approaches to disclose the molecular basis of essential enantioselective phenomena in the domain of chemical, physical, and life sciences. With the primary aim of discussing this topic in an integrated way, a comprehensive pool of rational and systematic multidisciplinary information is provided, which concerns the fundamentals of chirality, a description of noncovalent interactions, and their implications in enantioselective processes occurring in different contexts. A specific focus is devoted to enantioselection in chromatography and electromigration techniques because of their unique feature as "multistep" processes. A second motivation for writing this review is to make a clear statement about the state of the art, the tools we have at our disposal, and what is still missing to fully understand the mechanisms underlying enantioselective recognition.
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Affiliation(s)
- Paola Peluso
- Istituto di Chimica Biomolecolare ICB, CNR, Sede secondaria di Sassari, Traversa La Crucca 3, Regione Baldinca, Li Punti, I-07100 Sassari, Italy
| | - Bezhan Chankvetadze
- Institute of Physical and Analytical Chemistry, School of Exact and Natural Sciences, Tbilisi State University, Chavchavadze Avenue 3, 0179 Tbilisi, Georgia
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8
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Crystal Structure of Chiral Drug Prenalterol and Its Precursor Prone to Spontaneous Resolution. Symmetry (Basel) 2022. [DOI: 10.3390/sym14061150] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023] Open
Abstract
Due to the chiral uniformity of proteins and carbohydrates, the basic building blocks of living matter, the mirror symmetry characteristics of drugs are of exceptional importance for medicinal chemistry. In this work, we present a new synthesis of the mono-enantiomeric chiral drug prenalterol 1 based on the symmetry-breaking phenomenon, namely, the spontaneous resolution of 4-hydroxyphenyl glycerol ether 2. The single crystal X-ray diffraction method was used to investigate both rac- and (S)-1 as well as (R)-2. A feature of the main crystal-forming supramolecular motif (SMM) for diol 2 is the participation of three different molecules representing different types of hydroxyl groups in the formation of its repeating unit. The type of prenalterol SMM, as in the case of the related drugs propranolol 3 and pindolol 4, appears to be a chirality driven property, and is dictated by the enantiomeric composition of the crystals. In single-enantiomeric forms, infinite one-dimensional chains are realized, organized around helical axes, while in racemates, zero-dimensional cycles are realized, organized around inversion symmetry elements. The results obtained again demonstrate the influence of the chiral polarization of a substance not only on the general (selection of a space group), but also on particular characteristics of matter crystal organization, namely selection of a specific SMM.
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9
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Sallembien Q, Bouteiller L, Crassous J, Raynal M. Possible chemical and physical scenarios towards biological homochirality. Chem Soc Rev 2022; 51:3436-3476. [PMID: 35377372 DOI: 10.1039/d1cs01179k] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The single chirality of biological molecules in terrestrial biology raises more questions than certitudes about its origin. The emergence of biological homochirality (BH) and its connection with the appearance of life have elicited a large number of theories related to the generation, amplification and preservation of a chiral bias in molecules of life under prebiotically relevant conditions. However, a global scenario is still lacking. Here, the possibility of inducing a significant chiral bias "from scratch", i.e. in the absence of pre-existing enantiomerically-enriched chemical species, will be considered first. It includes phenomena that are inherent to the nature of matter itself, such as the infinitesimal energy difference between enantiomers as a result of violation of parity in certain fundamental interactions, and physicochemical processes related to interactions between chiral organic molecules and physical fields, polarized particles, polarized spins and chiral surfaces. The spontaneous emergence of chirality in the absence of detectable chiral physical and chemical sources has recently undergone significant advances thanks to the deracemization of conglomerates through Viedma ripening and asymmetric auto-catalysis with the Soai reaction. All these phenomena are commonly discussed as plausible sources of asymmetry under prebiotic conditions and are potentially accountable for the primeval chiral bias in molecules of life. Then, several scenarios will be discussed that are aimed to reflect the different debates about the emergence of BH: extra-terrestrial or terrestrial origin (where?), nature of the mechanisms leading to the propagation and enhancement of the primeval chiral bias (how?) and temporal sequence between chemical homochirality, BH and life emergence (when?). Intense and ongoing theories regarding the emergence of optically pure molecules at different moments of the evolution process towards life, i.e. at the levels of building blocks of Life, of the instructed or functional polymers, or even later at the stage of more elaborated chemical systems, will be critically discussed. The underlying principles and the experimental evidence will be commented for each scenario with particular attention on those leading to the induction and enhancement of enantiomeric excesses in proteinogenic amino acids, natural sugars, and their intermediates or derivatives. The aim of this review is to propose an updated and timely synopsis in order to stimulate new efforts in this interdisciplinary field.
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Affiliation(s)
- Quentin Sallembien
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Laurent Bouteiller
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Jeanne Crassous
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes, ISCR-UMR 6226, F-35000 Rennes, France.
| | - Matthieu Raynal
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
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10
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IKEMOTO K, FUKUNAGA TM, ISOBE H. Phenine design for nanocarbon molecules. PROCEEDINGS OF THE JAPAN ACADEMY. SERIES B, PHYSICAL AND BIOLOGICAL SCIENCES 2022; 98:379-400. [PMID: 36216532 PMCID: PMC9614209 DOI: 10.2183/pjab.98.020] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 06/09/2022] [Indexed: 06/16/2023]
Abstract
With the name "phenine" given to 1,3,5-trisubstituted benzene for a fundamental trigonal planar unit to weave nanometer-sized networks, a series of curved nanocarbon molecules have been designed and synthesized. Since the 6π-phenine units were amenable to modern biaryl coupling reactions mediated by transition metals, concise syntheses of >400π-nanocarbon molecules were readily achieved. In addition, the phenine design allowed for installing of heteroatoms and/or transition metals doped at specific positions of the large π-systems of the nanocarbon molecules. Fundamental tools were also developed to specify and describe the locations of defects/dopants, quantify pyramidalizations of trigonal panels and estimate molecular Gauss curvatures of the discrete surface. Unique features of phenine nanocarbons, such as stereoisomerism, entropy-driven molecular assembly and effects of dopants on electronic/magnetic characteristics, were revealed during the first half-decade of investigations.
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Affiliation(s)
- Koki IKEMOTO
- Department of Chemistry, The University of Tokyo, Tokyo, Japan
| | | | - Hiroyuki ISOBE
- Department of Chemistry, The University of Tokyo, Tokyo, Japan
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11
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Abstract
This article reviews the development of concepts of chirality in chemistry. The story follows the parallel development of the optical properties of materials and the understanding of chemical structure until the two are fused in the recognition of the tetrahedral carbon atom in 1874. The different types of chiral molecule that have been identified since the first concept of the asymmetric carbon atom are introduced as is the notation used in various disciplines of chemistry to describe the relative or absolute configuration. In the final section, a polemical case for a unified nomenclature is presented.
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12
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13
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Fukunaga TM, Sawabe C, Matsuno T, Takeya J, Okamoto T, Isobe H. Manipulations of Chiroptical Properties in Belt‐Persistent Cycloarylenes via Desymmetrization with Heteroatom Doping. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202106992] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Toshiya M. Fukunaga
- Department of Chemistry The University of Tokyo Hongo 7-3-1, Bunkyo-ku Tokyo 113-0033 Japan
| | - Chizuru Sawabe
- Material Innovation Research Center (MIRC) and Department of Advanced Materials Science Graduate School of Frontier Sciences The University of Tokyo Kashiwanoha 5-1-5, Kashiwa Chiba 277–8561 Japan
| | - Taisuke Matsuno
- Department of Chemistry The University of Tokyo Hongo 7-3-1, Bunkyo-ku Tokyo 113-0033 Japan
| | - Jun Takeya
- Material Innovation Research Center (MIRC) and Department of Advanced Materials Science Graduate School of Frontier Sciences The University of Tokyo Kashiwanoha 5-1-5, Kashiwa Chiba 277–8561 Japan
| | - Toshihiro Okamoto
- Material Innovation Research Center (MIRC) and Department of Advanced Materials Science Graduate School of Frontier Sciences The University of Tokyo Kashiwanoha 5-1-5, Kashiwa Chiba 277–8561 Japan
| | - Hiroyuki Isobe
- Department of Chemistry The University of Tokyo Hongo 7-3-1, Bunkyo-ku Tokyo 113-0033 Japan
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14
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Fukunaga TM, Sawabe C, Matsuno T, Takeya J, Okamoto T, Isobe H. Manipulations of Chiroptical Properties in Belt-Persistent Cycloarylenes via Desymmetrization with Heteroatom Doping. Angew Chem Int Ed Engl 2021; 60:19097-19101. [PMID: 34129256 DOI: 10.1002/anie.202106992] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2021] [Revised: 06/14/2021] [Indexed: 11/08/2022]
Abstract
A desymmetrization strategy has been devised in the design of molecular cylinders to maximize the dissymmetry factor relevant to circularly polarized light. Although the highest dissymmetry factor of organic molecules was previously achieved with a chiral belt-persistent cycloarylene having magnetic and electric transition dipole moments in parallel, we noticed that an unbalanced magnitude of two moments was detrimental for higher dissymmetry factors. In this study, a molecular cylinder was desymmetrized by arraying doped and undoped panels via stereoselective cross-coupling macrocyclization. The desymmetrization succeeded in balancing two moments by reducing the electric transition moment at the global minimum but failed to maximize the dissymmetry factor. Structural studies revealed that the dissymmetry factor is sensitive to subtle structural fluctuations, while the rotatory strength is not affected. This study is important for the development of chiroptical materials.
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Affiliation(s)
- Toshiya M Fukunaga
- Department of Chemistry, The University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Chizuru Sawabe
- Material Innovation Research Center (MIRC) and Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha 5-1-5, Kashiwa, Chiba, 277-8561, Japan
| | - Taisuke Matsuno
- Department of Chemistry, The University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Jun Takeya
- Material Innovation Research Center (MIRC) and Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha 5-1-5, Kashiwa, Chiba, 277-8561, Japan
| | - Toshihiro Okamoto
- Material Innovation Research Center (MIRC) and Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha 5-1-5, Kashiwa, Chiba, 277-8561, Japan
| | - Hiroyuki Isobe
- Department of Chemistry, The University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo, 113-0033, Japan
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15
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Alonso ER, León I, Kolesniková L, Mata S, Alonso JL. Unveiling Five Naked Structures of Tartaric Acid. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202105718] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Elena R. Alonso
- Instituto Biofisika (UPV/EHU, CSIC) University of the Basque Country 48940 Leioa Spain
- Departamento de Química Física Facultad de Ciencia y Tecnología Universidad del País Vasco Barrio Sarriena s/n 48940 Leioa Spain
| | - Iker León
- Grupo de Espectroscopia Molecular (GEM) Edificio Quifima Área de Química-Física Laboratorios de Espectroscopia y Bioespectroscopia Parque Científico UVa Unidad Asociada CSIC Universidad de Valladolid 47011 Valladolid Spain
| | - Lucie Kolesniková
- Department of Analytical Chemistry University of Chemistry and Technology Technická 5 16628 Prague 6 Czech Republic
| | - Santiago Mata
- Grupo de Espectroscopia Molecular (GEM) Edificio Quifima Área de Química-Física Laboratorios de Espectroscopia y Bioespectroscopia Parque Científico UVa Unidad Asociada CSIC Universidad de Valladolid 47011 Valladolid Spain
| | - Jose Luis Alonso
- Grupo de Espectroscopia Molecular (GEM) Edificio Quifima Área de Química-Física Laboratorios de Espectroscopia y Bioespectroscopia Parque Científico UVa Unidad Asociada CSIC Universidad de Valladolid 47011 Valladolid Spain
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16
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Dey A, Ye J, De A, Debroye E, Ha SK, Bladt E, Kshirsagar AS, Wang Z, Yin J, Wang Y, Quan LN, Yan F, Gao M, Li X, Shamsi J, Debnath T, Cao M, Scheel MA, Kumar S, Steele JA, Gerhard M, Chouhan L, Xu K, Wu XG, Li Y, Zhang Y, Dutta A, Han C, Vincon I, Rogach AL, Nag A, Samanta A, Korgel BA, Shih CJ, Gamelin DR, Son DH, Zeng H, Zhong H, Sun H, Demir HV, Scheblykin IG, Mora-Seró I, Stolarczyk JK, Zhang JZ, Feldmann J, Hofkens J, Luther JM, Pérez-Prieto J, Li L, Manna L, Bodnarchuk MI, Kovalenko MV, Roeffaers MBJ, Pradhan N, Mohammed OF, Bakr OM, Yang P, Müller-Buschbaum P, Kamat PV, Bao Q, Zhang Q, Krahne R, Galian RE, Stranks SD, Bals S, Biju V, Tisdale WA, Yan Y, Hoye RLZ, Polavarapu L. State of the Art and Prospects for Halide Perovskite Nanocrystals. ACS NANO 2021; 15:10775-10981. [PMID: 34137264 PMCID: PMC8482768 DOI: 10.1021/acsnano.0c08903] [Citation(s) in RCA: 379] [Impact Index Per Article: 126.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 05/04/2021] [Indexed: 05/10/2023]
Abstract
Metal-halide perovskites have rapidly emerged as one of the most promising materials of the 21st century, with many exciting properties and great potential for a broad range of applications, from photovoltaics to optoelectronics and photocatalysis. The ease with which metal-halide perovskites can be synthesized in the form of brightly luminescent colloidal nanocrystals, as well as their tunable and intriguing optical and electronic properties, has attracted researchers from different disciplines of science and technology. In the last few years, there has been a significant progress in the shape-controlled synthesis of perovskite nanocrystals and understanding of their properties and applications. In this comprehensive review, researchers having expertise in different fields (chemistry, physics, and device engineering) of metal-halide perovskite nanocrystals have joined together to provide a state of the art overview and future prospects of metal-halide perovskite nanocrystal research.
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Grants
- from U. S. Department of Energy, Office of Science, Office of Basic Energy Sciences, Materials Sciences and Engineering Division
- Ministry of Education, Culture, Sports, Science and Technology
- European Research Council under the European Unionâ??s Horizon 2020 research and innovation programme (HYPERION)
- Ministry of Education - Singapore
- FLAG-ERA JTC2019 project PeroGas.
- Deutsche Forschungsgemeinschaft
- Division of Chemical Sciences, Geosciences, and Biosciences, Office of Basic Energy Sciences of the U.S. Department of Energy
- EPSRC
- iBOF funding
- Agencia Estatal de Investigaci�ón, Ministerio de Ciencia, Innovaci�ón y Universidades
- National Research Foundation Singapore
- National Natural Science Foundation of China
- Croucher Foundation
- US NSF
- Fonds Wetenschappelijk Onderzoek
- National Science Foundation
- Royal Society and Tata Group
- Department of Science and Technology, Ministry of Science and Technology
- Swiss National Science Foundation
- Natural Science Foundation of Shandong Province, China
- Research 12210 Foundation?Flanders
- Japan International Cooperation Agency
- Ministry of Science and Innovation of Spain under Project STABLE
- Generalitat Valenciana via Prometeo Grant Q-Devices
- VetenskapsrÃÂ¥det
- Natural Science Foundation of Jiangsu Province
- KU Leuven
- Knut och Alice Wallenbergs Stiftelse
- Generalitat Valenciana
- Agency for Science, Technology and Research
- Ministerio de EconomÃÂa y Competitividad
- Royal Academy of Engineering
- Hercules Foundation
- China Association for Science and Technology
- U.S. Department of Energy
- Alexander von Humboldt-Stiftung
- Wenner-Gren Foundation
- Welch Foundation
- Vlaamse regering
- European Commission
- Bayerisches Staatsministerium für Wissenschaft, Forschung und Kunst
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Affiliation(s)
- Amrita Dey
- Chair for
Photonics and Optoelectronics, Nano-Institute Munich, Department of
Physics, Ludwig-Maximilians-Universität
(LMU), Königinstrasse 10, 80539 Munich, Germany
| | - Junzhi Ye
- Cavendish
Laboratory, University of Cambridge, 19 JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Apurba De
- School of
Chemistry, University of Hyderabad, Hyderabad 500 046, India
| | - Elke Debroye
- Department
of Chemistry, KU Leuven, 3001 Leuven, Belgium
| | - Seung Kyun Ha
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
| | - Eva Bladt
- EMAT, University
of Antwerp, Groenenborgerlaan
171, 2020 Antwerp, Belgium
- NANOlab Center
of Excellence, University of Antwerp, 2020 Antwerp, Belgium
| | - Anuraj S. Kshirsagar
- Department
of Chemistry, Indian Institute of Science
Education and Research (IISER), Pune 411008, India
| | - Ziyu Wang
- School
of
Science and Technology for Optoelectronic Information ,Yantai University, Yantai, Shandong Province 264005, China
| | - Jun Yin
- Division
of Physical Science and Engineering, King
Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
- CINBIO,
Universidade de Vigo, Materials Chemistry
and Physics group, Departamento de Química Física, Campus Universitario As Lagoas,
Marcosende, 36310 Vigo, Spain
- Advanced
Membranes and Porous Materials Center, King
Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Yue Wang
- MIIT Key
Laboratory of Advanced Display Materials and Devices, Institute of
Optoelectronics & Nanomaterials, College of Materials Science
and Engineering, Nanjing University of Science
and Technology, Nanjing 210094, China
| | - Li Na Quan
- Department
of Chemistry, University of California,
Berkeley, Berkeley, California 94720, United States
- Materials
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Fei Yan
- LUMINOUS!
Center of Excellence for Semiconductor Lighting and Displays, TPI-The
Photonics Institute, School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798
| | - Mengyu Gao
- Materials
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
- Department
of Materials Science and Engineering, University
of California, Berkeley, California 94720, United States
| | - Xiaoming Li
- MIIT Key
Laboratory of Advanced Display Materials and Devices, Institute of
Optoelectronics & Nanomaterials, College of Materials Science
and Engineering, Nanjing University of Science
and Technology, Nanjing 210094, China
| | - Javad Shamsi
- Cavendish
Laboratory, University of Cambridge, 19 JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Tushar Debnath
- Chair for
Photonics and Optoelectronics, Nano-Institute Munich, Department of
Physics, Ludwig-Maximilians-Universität
(LMU), Königinstrasse 10, 80539 Munich, Germany
| | - Muhan Cao
- Institute
of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory
for Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Manuel A. Scheel
- Lehrstuhl
für Funktionelle Materialien, Physik Department, Technische Universität München, James-Franck-Str. 1, 85748 Garching, Germany
| | - Sudhir Kumar
- Institute
for Chemical and Bioengineering, Department of Chemistry and Applied
Biosciences, ETH-Zurich, CH-8093 Zürich, Switzerland
| | - Julian A. Steele
- MACS Department
of Microbial and Molecular Systems, KU Leuven, 3001 Leuven, Belgium
| | - Marina Gerhard
- Chemical
Physics and NanoLund Lund University, PO Box 124, 22100 Lund, Sweden
| | - Lata Chouhan
- Graduate
School of Environmental Science and Research Institute for Electronic
Science, Hokkaido University, Sapporo, Hokkaido 001-0020, Japan
| | - Ke Xu
- Department
of Chemistry and Biochemistry, University
of California, Santa Cruz, California 95064, United States
- Multiscale
Crystal Materials Research Center, Shenzhen Institute of Advanced
Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xian-gang Wu
- Beijing
Key Laboratory of Nanophotonics and Ultrafine Optoelectronic Systems,
School of Materials Science & Engineering, Beijing Institute of Technology, 5 Zhongguancun South Street, Haidian
District, Beijing 100081, China
| | - Yanxiu Li
- Department
of Materials Science and Engineering, and Centre for Functional Photonics
(CFP), City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong S.A.R.
| | - Yangning Zhang
- McKetta
Department of Chemical Engineering and Texas Materials Institute, The University of Texas at Austin, Austin, Texas 78712-1062, United States
| | - Anirban Dutta
- School
of Materials Sciences, Indian Association
for the Cultivation of Science, Kolkata 700032, India
| | - Chuang Han
- Department
of Chemistry and Biochemistry, San Diego
State University, San Diego, California 92182, United States
| | - Ilka Vincon
- Chair for
Photonics and Optoelectronics, Nano-Institute Munich, Department of
Physics, Ludwig-Maximilians-Universität
(LMU), Königinstrasse 10, 80539 Munich, Germany
| | - Andrey L. Rogach
- Department
of Materials Science and Engineering, and Centre for Functional Photonics
(CFP), City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong S.A.R.
| | - Angshuman Nag
- Department
of Chemistry, Indian Institute of Science
Education and Research (IISER), Pune 411008, India
| | - Anunay Samanta
- School of
Chemistry, University of Hyderabad, Hyderabad 500 046, India
| | - Brian A. Korgel
- McKetta
Department of Chemical Engineering and Texas Materials Institute, The University of Texas at Austin, Austin, Texas 78712-1062, United States
| | - Chih-Jen Shih
- Institute
for Chemical and Bioengineering, Department of Chemistry and Applied
Biosciences, ETH-Zurich, CH-8093 Zürich, Switzerland
| | - Daniel R. Gamelin
- Department
of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Dong Hee Son
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
| | - Haibo Zeng
- MIIT Key
Laboratory of Advanced Display Materials and Devices, Institute of
Optoelectronics & Nanomaterials, College of Materials Science
and Engineering, Nanjing University of Science
and Technology, Nanjing 210094, China
| | - Haizheng Zhong
- Beijing
Key Laboratory of Nanophotonics and Ultrafine Optoelectronic Systems,
School of Materials Science & Engineering, Beijing Institute of Technology, 5 Zhongguancun South Street, Haidian
District, Beijing 100081, China
| | - Handong Sun
- Division
of Physics and Applied Physics, School of Physical and Mathematical
Sciences, Nanyang Technological University, Singapore 637371
- Centre
for Disruptive Photonic Technologies (CDPT), Nanyang Technological University, Singapore 637371
| | - Hilmi Volkan Demir
- LUMINOUS!
Center of Excellence for Semiconductor Lighting and Displays, TPI-The
Photonics Institute, School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798
- Division
of Physics and Applied Physics, School of Physical and Mathematical
Sciences, Nanyang Technological University, Singapore 639798
- Department
of Electrical and Electronics Engineering, Department of Physics,
UNAM-Institute of Materials Science and Nanotechnology, Bilkent University, Ankara 06800, Turkey
| | - Ivan G. Scheblykin
- Chemical
Physics and NanoLund Lund University, PO Box 124, 22100 Lund, Sweden
| | - Iván Mora-Seró
- Institute
of Advanced Materials (INAM), Universitat
Jaume I, 12071 Castelló, Spain
| | - Jacek K. Stolarczyk
- Chair for
Photonics and Optoelectronics, Nano-Institute Munich, Department of
Physics, Ludwig-Maximilians-Universität
(LMU), Königinstrasse 10, 80539 Munich, Germany
| | - Jin Z. Zhang
- Department
of Chemistry and Biochemistry, University
of California, Santa Cruz, California 95064, United States
| | - Jochen Feldmann
- Chair for
Photonics and Optoelectronics, Nano-Institute Munich, Department of
Physics, Ludwig-Maximilians-Universität
(LMU), Königinstrasse 10, 80539 Munich, Germany
| | - Johan Hofkens
- Department
of Chemistry, KU Leuven, 3001 Leuven, Belgium
- Max Planck
Institute for Polymer Research, Mainz 55128, Germany
| | - Joseph M. Luther
- National
Renewable Energy Laboratory, Golden, Colorado 80401, United States
| | - Julia Pérez-Prieto
- Institute
of Molecular Science, University of Valencia, c/Catedrático José
Beltrán 2, Paterna, Valencia 46980, Spain
| | - Liang Li
- School
of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Liberato Manna
- Nanochemistry
Department, Istituto Italiano di Tecnologia, Via Morego 30, Genova 16163, Italy
| | - Maryna I. Bodnarchuk
- Institute
of Inorganic Chemistry and § Institute of Chemical and Bioengineering,
Department of Chemistry and Applied Bioscience, ETH Zurich, Vladimir
Prelog Weg 1, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, CH-8600 Dübendorf, Switzerland
| | - Maksym V. Kovalenko
- Institute
of Inorganic Chemistry and § Institute of Chemical and Bioengineering,
Department of Chemistry and Applied Bioscience, ETH Zurich, Vladimir
Prelog Weg 1, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, CH-8600 Dübendorf, Switzerland
| | | | - Narayan Pradhan
- School
of Materials Sciences, Indian Association
for the Cultivation of Science, Kolkata 700032, India
| | - Omar F. Mohammed
- Advanced
Membranes and Porous Materials Center, King
Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
- KAUST Catalysis
Center, King Abdullah University of Science
and Technology, Thuwal 23955-6900, Kingdom of Saudi
Arabia
| | - Osman M. Bakr
- Division
of Physical Science and Engineering, King
Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
- Advanced
Membranes and Porous Materials Center, King
Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Peidong Yang
- Department
of Chemistry, University of California,
Berkeley, Berkeley, California 94720, United States
- Materials
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
- Department
of Materials Science and Engineering, University
of California, Berkeley, California 94720, United States
- Kavli
Energy NanoScience Institute, Berkeley, California 94720, United States
| | - Peter Müller-Buschbaum
- Lehrstuhl
für Funktionelle Materialien, Physik Department, Technische Universität München, James-Franck-Str. 1, 85748 Garching, Germany
- Heinz Maier-Leibnitz
Zentrum (MLZ), Technische Universität
München, Lichtenbergstr. 1, D-85748 Garching, Germany
| | - Prashant V. Kamat
- Notre Dame
Radiation Laboratory, Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Qiaoliang Bao
- Department
of Materials Science and Engineering and ARC Centre of Excellence
in Future Low-Energy Electronics Technologies (FLEET), Monash University, Clayton, Victoria 3800, Australia
| | - Qiao Zhang
- Institute
of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory
for Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Roman Krahne
- Istituto
Italiano di Tecnologia, Via Morego 30, 16163 Genova, Italy
| | - Raquel E. Galian
- School
of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Samuel D. Stranks
- Cavendish
Laboratory, University of Cambridge, 19 JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
- Department
of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB3 0AS, United Kingdom
| | - Sara Bals
- EMAT, University
of Antwerp, Groenenborgerlaan
171, 2020 Antwerp, Belgium
- NANOlab Center
of Excellence, University of Antwerp, 2020 Antwerp, Belgium
| | - Vasudevanpillai Biju
- Graduate
School of Environmental Science and Research Institute for Electronic
Science, Hokkaido University, Sapporo, Hokkaido 001-0020, Japan
| | - William A. Tisdale
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
| | - Yong Yan
- Department
of Chemistry and Biochemistry, San Diego
State University, San Diego, California 92182, United States
| | - Robert L. Z. Hoye
- Department
of Materials, Imperial College London, Exhibition Road, London SW7 2AZ, United Kingdom
| | - Lakshminarayana Polavarapu
- Chair for
Photonics and Optoelectronics, Nano-Institute Munich, Department of
Physics, Ludwig-Maximilians-Universität
(LMU), Königinstrasse 10, 80539 Munich, Germany
- CINBIO,
Universidade de Vigo, Materials Chemistry
and Physics group, Departamento de Química Física, Campus Universitario As Lagoas,
Marcosende, 36310 Vigo, Spain
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17
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Alonso ER, León I, Kolesniková L, Mata S, Alonso JL. Unveiling Five Naked Structures of Tartaric Acid. Angew Chem Int Ed Engl 2021; 60:17410-17414. [PMID: 34060688 PMCID: PMC8361959 DOI: 10.1002/anie.202105718] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Indexed: 11/10/2022]
Abstract
The unbiased, naked structures of tartaric acid, one of the most important organic compounds existing in nature and a candidate to be present in the interstellar medium, has been revealed in this work for the first time. Solid samples of its naturally occurring (R,R) enantiomer have been vaporized by laser ablation, expanded in a supersonic jet, and characterized by Fourier transform microwave spectroscopy. In the isolation conditions of the jet, we have discovered up to five different structures stabilized by intramolecular hydrogen-bond networks dominated by O-H⋅⋅⋅O=C and O-H⋅⋅⋅O motifs extended along the entire molecule. These five forms, two with an extended (trans) disposition of the carbon chain and three with a bent (gauche) disposition, can serve as a basis to represent the shape of tartaric acid. This work also reports the first set of spectroscopy data that can be used to detect tartaric acid in the interstellar medium.
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Affiliation(s)
- Elena R Alonso
- Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, 48940, Leioa, Spain.,Departamento de Química Física, Facultad de Ciencia y Tecnología, Universidad del País Vasco, Barrio Sarriena s/n, 48940, Leioa, Spain
| | - Iker León
- Grupo de Espectroscopia Molecular (GEM), Edificio Quifima, Área de Química-Física, Laboratorios de Espectroscopia y Bioespectroscopia, Parque Científico UVa, Unidad Asociada CSIC, Universidad de Valladolid, 47011, Valladolid, Spain
| | - Lucie Kolesniková
- Department of Analytical Chemistry, University of Chemistry and Technology, Technická 5, 16628, Prague 6, Czech Republic
| | - Santiago Mata
- Grupo de Espectroscopia Molecular (GEM), Edificio Quifima, Área de Química-Física, Laboratorios de Espectroscopia y Bioespectroscopia, Parque Científico UVa, Unidad Asociada CSIC, Universidad de Valladolid, 47011, Valladolid, Spain
| | - Jose Luis Alonso
- Grupo de Espectroscopia Molecular (GEM), Edificio Quifima, Área de Química-Física, Laboratorios de Espectroscopia y Bioespectroscopia, Parque Científico UVa, Unidad Asociada CSIC, Universidad de Valladolid, 47011, Valladolid, Spain
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18
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Gogoi A, Konwer S, Zhuo GY. Polarimetric Measurements of Surface Chirality Based on Linear and Nonlinear Light Scattering. Front Chem 2021; 8:611833. [PMID: 33644001 PMCID: PMC7902787 DOI: 10.3389/fchem.2020.611833] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Accepted: 12/31/2020] [Indexed: 01/21/2023] Open
Abstract
A molecule, molecular aggregate, or protein that cannot be superimposed on its mirror image presents chirality. Most living systems are organized by chiral building blocks, such as amino acids, peptides, and carbohydrates, and any change in their molecular structure (i.e., handedness or helicity) alters the biochemical and pharmacological functions of the molecules, many of which take place at surfaces. Therefore, studying surface chirogenesis at the nanoscale is fundamentally important and derives various applications. For example, since proteins contain highly ordered secondary structures, the intrinsic chirality can be served as a signature to measure the dynamics of protein adsorption and protein conformational changes at biological surfaces. Furthermore, a better understanding of chiral recognition and separation at bio-nanointerfaces is helpful to standardize chiral drugs and monitor the synthesis of adsorbents with high precision. Thus, exploring the changes in surface chirality with polarized excitations would provide structural and biochemical information of the adsorbed molecules, which has led to the development of label-free and noninvasive measurement tools based on linear and nonlinear optical effects. In this review, the principles and selected applications of linear and nonlinear optical methods for quantifying surface chirality are introduced and compared, aiming to conceptualize new ideas to address critical issues in surface biochemistry.
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Affiliation(s)
- Ankur Gogoi
- Department of Physics, Jagannath Barooah College, Jorhat, India
| | - Surajit Konwer
- Department of Chemistry, Dibrugarh University, Dibrugarh, India
| | - Guan-Yu Zhuo
- Institute of New Drug Development, China Medical University, Taichung, Taiwan.,Integrative Stem Cell Center, China Medical University Hospital, Taichung, Taiwan
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19
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When Stereochemistry Raised Its Ugly Head in Coordination Chemistry—An Appreciation of Howard Flack. CHEMISTRY 2020. [DOI: 10.3390/chemistry2030049] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Chiral compounds have played an important role in the development of coordination chemistry. Unlike organic chemistry, where mechanistic rules allowed the establishment of absolute configurations for numerous compounds once a single absolute determination had been made, coordination compounds are more complex. This article discusses the development of crystallographic methods and the interplay with coordination chemistry. Most importantly, the development of the Flack parameter is identified as providing a routine method for determining the absolute configuration of coordination compounds.
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20
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Castro-Fernández S, Peña-Gallego Á, Mosquera RA, Alonso-Gómez JL. Chiroptical Symmetry Analysis: Exciton Chirality-Based Formulae to Understand the Chiroptical Responses of Cn and Dn Symmetric Systems. Molecules 2019; 24:molecules24010141. [PMID: 30609677 PMCID: PMC6337451 DOI: 10.3390/molecules24010141] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2018] [Revised: 12/24/2018] [Accepted: 12/24/2018] [Indexed: 11/16/2022] Open
Abstract
The high sensitivity of chiroptical responses to conformational changes and supramolecular interactions has prompted an increasing interest in the development of chiroptical applications. However, prediction of and understanding the chiroptical responses of the necessary large systems may not be affordable for calculations at high levels of theory. In order to facilitate the development of chiroptical applications, methodologies capable of evaluating the chiroptical responses of large systems are necessary. The exciton chirality method has been extensively used for the interaction between two independent chromophores through the Davydov model. For systems presenting C2 or D2 symmetry, one can get the same results by applying the selection rules. In the present article, the analysis of the selection rules for systems with symmetries Cn and Dn with n = 3 and 4 is used to uncover the origin of their chiroptical responses. We foresee that the use of the Chiroptical Symmetry Analysis (CSA) for systems presenting the symmetries explored herein, as well as for systems presenting higher symmetries will serve as a useful tool for the development of chiroptical applications.
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Affiliation(s)
- Silvia Castro-Fernández
- Departamento de Química Orgánica, Facultade de Químicas, Universidade de Vigo, Lagoas-Marcosende s/n, 36310 Vigo, Spain.
| | - Ángeles Peña-Gallego
- Departamento de Química Física, Facultade de Químicas, Universidade de Vigo, Lagoas-Marcosende s/n, 36310 Vigo, Spain.
| | - Ricardo A Mosquera
- Departamento de Química Física, Facultade de Químicas, Universidade de Vigo, Lagoas-Marcosende s/n, 36310 Vigo, Spain.
| | - José Lorenzo Alonso-Gómez
- Departamento de Química Orgánica, Facultade de Químicas, Universidade de Vigo, Lagoas-Marcosende s/n, 36310 Vigo, Spain.
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21
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Malik P, Bhushan R. Development of Bovine Serum Albumin-Bonded Silica as a Chiral Stationary Phase and Its Application in Quantitative Direct Enantiomeric Resolution. Org Process Res Dev 2018. [DOI: 10.1021/acs.oprd.8b00065] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Poonam Malik
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee-247667, India
| | - Ravi Bhushan
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee-247667, India
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22
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Dutta S, Gellman AJ. Enantiomer surface chemistry: conglomerate versus racemate formation on surfaces. Chem Soc Rev 2018; 46:7787-7839. [PMID: 29165467 DOI: 10.1039/c7cs00555e] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Research on surface chirality is motivated by the need to develop functional chiral surfaces for enantiospecific applications. While molecular chirality in 3D has been the subject of study for almost two centuries, many aspects of 2D chiral surface chemistry have yet to be addressed. In 3D, racemic mixtures of chiral molecules tend to aggregate into racemate (molecularly heterochiral) crystals much more frequently than conglomerate (molecularly homochiral) crystals. Whether chiral adsorbates on surfaces preferentially aggregate into heterochiral rather than homochiral domains (2D crystals or clusters) is not known. In this review, we have made the first attempt to answer the following question based on available data: in 2D racemic mixtures adsorbed on surfaces, is there a clear preference for homochiral or heterochiral aggregation? The current hypothesis is that homochiral packing is preferred on surfaces; in contrast to 3D where heterochiral packing is more common. In this review, we present a simple hierarchical scheme to categorize the chirality of adsorbate-surface systems. We then review the body of work using scanning tunneling microscopy predominantly to study aggregation of racemic adsorbates. Our analysis of the existing literature suggests that there is no clear evidence of any preference for either homochiral or heterochiral aggregation at the molecular level by chiral and prochiral adsorbates on surfaces.
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Affiliation(s)
- Soham Dutta
- Department of Chemical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
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23
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Chromatographic separations based on tartaric acid and its derivatives. MONATSHEFTE FUR CHEMIE 2018. [DOI: 10.1007/s00706-018-2160-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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24
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Bredikhin AA, Bredikhina ZA. Stereoselective Crystallization as a Basis for Single-Enantiomer Drug Production. Chem Eng Technol 2017. [DOI: 10.1002/ceat.201600649] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Alexander A. Bredikhin
- Russian Academy of Sciences; Kazan Scientific Center; A.E. Arbuzov Institute of Organic and Physical Chemistry; Arbuzov st., 8 420088 Kazan Russia
| | - Zemfira A. Bredikhina
- Russian Academy of Sciences; Kazan Scientific Center; A.E. Arbuzov Institute of Organic and Physical Chemistry; Arbuzov st., 8 420088 Kazan Russia
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25
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Maioli M, Varadi G, Kurdi R, Caglioti L, Pályi G. Limits of the Classical Concept of Concentration. J Phys Chem B 2016; 120:7438-45. [PMID: 27384879 DOI: 10.1021/acs.jpcb.6b02904] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Solutions of very low concentrations cannot be treated by the usual concept of concentration. Stochastic calculations are performed for the analysis of such solutions containing one or a few molecule(s). It is concluded that these systems escape the usual concentration parameters. Two "case histories" are also shown for demonstration of the practical consequences of the theoretical analysis.
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Affiliation(s)
- Marco Maioli
- Department of Mathematics, University of Modena and Reggio Emilia , Via Campi 213/B, I-41125 Modena, Italy
| | - Gyula Varadi
- Inpellis, Inc. , 100 Cummings Center, Suite 243C, Beverly, Massachusetts 01915-6133, United States
| | - Róbert Kurdi
- Institute of Environmental Engineering, University of Pannonia , Egyetem u. 10, H-8200 Veszprém, Hungary
| | - Luciano Caglioti
- Department of Chemistry and Technology of Biologically Active Compounds, University "La Sapienza"-Roma , P.le A. Moro 5, I-00185 Roma, Italy
| | - Gyula Pályi
- Department of Life Sciences, University of Modena and Reggio Emilia , Via Campi 103, I-41125 Modena, Italy
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26
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Sanfilippo C, Forni A, Patti A. Characterization of a conglomerate-forming derivative of (±)-milnacipran and its enantiomeric resolution by preferential crystallization. RSC Adv 2016. [DOI: 10.1039/c6ra07745e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
The conglomerate nature of crystals of an N-isobutyramide derivative of milnacipran was efficiently exploited for its enantiomeric resolution by preferential crystallization.
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Affiliation(s)
| | - Alessandra Forni
- CNR – Istituto di Scienze e Tecnologie Molecolari del CNR
- I-20133 Milano
- Italy
| | - Angela Patti
- CNR – Istituto di Chimica Biomolecolare
- I-95126 Catania
- Italy
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27
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Abstract
Stereochemical factors are known to play a significant role in the metabolism of drugs and other xenobiotics. Following Prelog's lead, types of metabolic stereoselectivity can be categorized as (i) substrate stereoselectivity (the differential metabolism of two or more stereoisomeric substrates) and (ii) product stereoselectivity (the differential formation of two or more stereoisomeric metabolites from a single substrate). Combinations of the two categories exist as (iii) substrate-product stereoselectivities, meaning that product stereoselectivity itself is substrate stereoselective. Here, published examples of metabolic stereoselectivities are examined in the light of these concepts. In parallel, a graphical scheme is presented with a view to facilitate learning and help researchers to solve classification problems.
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Affiliation(s)
- Bernard Testa
- Department of Pharmacy, Lausanne University Hospital , Lausanne , Switzerland
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28
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Heister P, Lünskens T, Thämer M, Kartouzian A, Gerlach S, Verbiest T, Heiz U. Orientational changes of supported chiral 2,2'-dihydroxy-1,1'binaphthyl molecules. Phys Chem Chem Phys 2014; 16:7299-306. [PMID: 24618806 DOI: 10.1039/c4cp00106k] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Well defined thin molecular films of 2,2'-dihydroxy-1,1'binaphthyl (binol) molecules at coverages between 5 × 10(15) molecules per cm(2) and 10(17) molecules per cm(2) on thin glass (BK7) substrates were investigated under ultra-high-vacuum (UHV) conditions. Second-Harmonic-Generation Optical-Rotatory-Dispersion measurements (SHG-ORD) were performed using a dedicated spectroscopic setup which allows for the determination of the rotation angle of the SH-signal of two enantiomers. Rotation angles of up to 38 degrees were measured. The chirality of the two enantiomers has been studied at 674 nm (337 nm resonance wavelength) in the transmission mode. Coverage dependent orientation evolution of binol molecular films was revealed by precise monitoring of the surface coverage while performing SHG-ORD experiments. We show that the molecules reach their final orientation at a surface coverage of 5 × 10(16) molecules per cm(2). From the obtained experimental data the ratio of chiral and achiral susceptibility components could be calculated and was observed to change with coverage.
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Affiliation(s)
- Philipp Heister
- Lehrstuhl für physikalische Chemie & Catalysis Research Center, Chemistry Department, Technische Universität München, Lichtenbergstraße 4, 85748 Garching bei München, Germany.
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