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Sandt C. Identification and classification of proteins by FTIR microspectroscopy. A proof of concept. Biochim Biophys Acta Gen Subj 2024; 1868:130688. [PMID: 39117047 DOI: 10.1016/j.bbagen.2024.130688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Revised: 07/23/2024] [Accepted: 08/05/2024] [Indexed: 08/10/2024]
Abstract
FTIR spectroscopy is well known for its molecule fingerprinting capability but is also able to differentiate classes in complex biological systems. This includes strain typing and species level identification of bacterial, yeast or fungal cells, as well as distinguishing between cell layers in eukaryotic tissues. However, its use for the identification of macromolecules such as proteins remains underexplored and rarely used in practice. Here we demonstrate the efficacy of FTIR microspectroscopy coupled with machine learning methods for rapid and accurate identification of proteins in their dry state within minutes, from very small quantities of material, if they are obtained in a pure aqueous solution. FTIR microspectroscopy can provide additional information beside identification: it can detect small differences among different purification batches potentially originating from post-translational modifications or distinct folding states. Moreover, it distinguishes glycoproteins and evaluate glycosylation while detecting contaminants. This methodology presents itself as a valuable quality control tool in protein purification processes or any process requiring the utilization of precisely identified, pure proteins.
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Affiliation(s)
- Christophe Sandt
- SMIS beamline, Synchrotron SOLEIL, RD128, 91190 Saint Aubin, France.
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2
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Dučić T, Sanchez-Mata A, Castillo-Sanchez J, Algarra M, Gonzalez-Munoz E. Monitoring oocyte-based human pluripotency acquisition using synchrotron-based FTIR microspectroscopy reveals specific biomolecular trajectories. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 297:122713. [PMID: 37084681 DOI: 10.1016/j.saa.2023.122713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Revised: 03/09/2023] [Accepted: 04/03/2023] [Indexed: 05/03/2023]
Abstract
The reprogramming of human somatic cells to induced pluripotent cells (iPSCs) has become a milestone and a paradigm shift in the field of regenerative medicine and human disease modeling including drug testing and genome editing. However, the molecular processes occurring during reprogramming and affecting the pluripotent state acquired remain largely unknown. Of interest, different pluripotent states have been described depending on the reprogramming factors used and the oocyte has emerged as a valuable source of information for candidate factors. The present study investigates the molecular changes occurring in somatic cells during reprogramming with either canonical (OSK) or oocyte-based (AOX15) combinations using synchrotron-radiation Fourier transform infrared (SR FTIR) spectroscopy. The data acquired by SR FTIR indicates different representation and conformation of biological relevant macromolecules (lipids, nucleic acids, carbohydrates and proteins) depending on the reprogramming combination used and at different stages during the reprogramming process. Association analysis based on cells spectra suggest that pluripotency acquisition trajectories converge at late intermediate stages while they diverge at early stages. Our results suggest that OSK and AOX15 reprogramming operates through differential mechanisms affecting nucleic acids reorganization and day 10 comes out as a candidate hinge point to further study the molecular pathways involved in the reprogramming process. This study indicates that SR FTIR approach contribute unpaired information to distinguish pluripotent states and to decipher pluripotency acquisition roadmaps and landmarks that will enable advanced biomedical applications of iPSCs.
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Affiliation(s)
- Tanja Dučić
- ALBA Synchrotron Light Source, Carrer de la Llum 2-26, 08290 Cerdanyola del Vallès, Barcelona, Spain.
| | - Alicia Sanchez-Mata
- Biomedical Research Institute and Nanomedicine Platform (IBIMA-BIONAND), C/ Severo Ochoa, 35, Malaga, Spain; Department of Cell Biology, Genetics and Physiology, University of Málaga, 29071 Málaga, Spain
| | - Jesus Castillo-Sanchez
- Biomedical Research Institute and Nanomedicine Platform (IBIMA-BIONAND), C/ Severo Ochoa, 35, Malaga, Spain; Department of Cell Biology, Genetics and Physiology, University of Málaga, 29071 Málaga, Spain
| | - Manuel Algarra
- INAMAT(2) Institute for Advanced Materials and Mathematics, Department of Sciences, Public University of Navarre, Campus de Arrosadia, 31006 Pamplona, Spain
| | - Elena Gonzalez-Munoz
- Biomedical Research Institute and Nanomedicine Platform (IBIMA-BIONAND), C/ Severo Ochoa, 35, Malaga, Spain; Department of Cell Biology, Genetics and Physiology, University of Málaga, 29071 Málaga, Spain.
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3
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Synchrotron Infrared Microspectroscopy for Stem Cell Research. Int J Mol Sci 2022; 23:ijms23179878. [PMID: 36077277 PMCID: PMC9456088 DOI: 10.3390/ijms23179878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 08/23/2022] [Accepted: 08/23/2022] [Indexed: 11/30/2022] Open
Abstract
Stem cells have shown great potential functions for tissue regeneration and repair because of their unlimited self-renewal and differentiation. Stem cells reside in their niches, making them a hotspot for the development and diagnosis of diseases. Complex interactions between niches and stem cells create the balance between differentiation, self-renewal, maturation, and proliferation. However, the multi-facet applications of stem cells have been challenged since the complicated responses of stem cells to biological processes were explored along with the limitations of current systems or methods. Emerging evidence highlights that synchrotron infrared microspectroscopy, known as synchrotron radiation-based Fourier transform infrared microspectroscopy, has been investigated as a potentially attractive technology with its non-invasive and non-biological probes in stem cell research. With their unique vibration bands, the quantitative mapping of the content and distribution of biomolecules can be detected and characterized in cells or tissues. In this review, we focus on the potential applications of synchrotron infrared microspectroscopy for investigating the differentiation and fate determination of stem cells.
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4
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Challenges and opportunities in the development of metal-based anticancer theranostic agents. Biosci Rep 2022; 42:231168. [PMID: 35420649 PMCID: PMC9109461 DOI: 10.1042/bsr20212160] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Revised: 04/07/2022] [Accepted: 04/13/2022] [Indexed: 12/02/2022] Open
Abstract
Around 10 million fatalities were recorded worldwide in 2020 due to cancer and statistical projections estimate the number to increase by 60% in 2040. With such a substantial rise in the global cancer burden, the disease will continue to impose a huge socio-economic burden on society. Currently, the most widely used clinical treatment modality is cytotoxic chemotherapy using platinum drugs which is used to treat variety of cancers. Despite its clinical success, critical challenges like resistance, off-target side effects and cancer variability often reduce its overall therapeutic efficiency. These challenges require faster diagnosis, simultaneous therapy and a more personalized approach toward cancer management. To this end, small-molecule ‘theranostic’ agents have presented a viable solution combining diagnosis and therapy into a single platform. In this review, we present a summary of recent efforts in the design and optimization of metal-based small-molecule ‘theranostic’ anticancer agents. Importantly, we highlight the advantages of a theranostic candidate over the purely therapeutic or diagnostic agent in terms of evaluation of its biological properties.
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Sandt C, Borondics F. A new typology of human hair medullas based on lipid composition analysis by synchrotron FTIR microspectroscopy. Analyst 2021; 146:3942-3954. [PMID: 33982696 DOI: 10.1039/d1an00695a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Human hair is an organ that connects fundamental and applied research with everyday life through the cosmetic industry. Yet, the accurate compositional description of the human hair medulla is lacking due to their small size and difficulty with microextraction. Medullas are thus generally classified based on morphology. We investigated the chemical composition of the human hair medulla using synchrotron based infrared microspectroscopy. We confirmed that lipid signatures dominate the medulla infrared spectrum having 3-20 times higher lipid concentration compared to their surrounding cortex. Human hair medullas contain a mixture of non-esterified and esterified lipids, and carboxylate soaps in various proportions. We reveal the first direct spectroscopic evidence that medulla carboxylates are coordinated to calcium since they exhibit the specific calcium carboxylate signature. Using a representative sample, we observed a strong compositional variability between medullas that was unreported before. We detected calcium carboxylates in 76% of the medullas with one order of magnitude concentration variability between samples. All medullas contained esters with esterification varying by a factor of 30. Moreover, we detected the presence of crystalline calcium stearate in 9% of the medullas. We described a series of spectral markers to characterize medullas based on their lipid composition and propose to classify medullas in four to five groups. Our analysis provides a more detailed understanding of the chemical composition of human hair medullas that may impact cosmetics and biology. The origin and biological meaning of these variations must still be investigated.
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Affiliation(s)
- Christophe Sandt
- SMIS beamline, SOLEIL Synchrotron, BP48, l'Orme des Merisiers, 91192 Gif-sur-Yvette CEDEX, France.
| | - Ferenc Borondics
- SMIS beamline, SOLEIL Synchrotron, BP48, l'Orme des Merisiers, 91192 Gif-sur-Yvette CEDEX, France.
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Srisongkram T, Weerapreeyakul N, Thumanu K. Evaluation of Melanoma (SK-MEL-2) Cell Growth between Three-Dimensional (3D) and Two-Dimensional (2D) Cell Cultures with Fourier Transform Infrared (FTIR) Microspectroscopy. Int J Mol Sci 2020; 21:ijms21114141. [PMID: 32531986 PMCID: PMC7312007 DOI: 10.3390/ijms21114141] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Revised: 05/23/2020] [Accepted: 06/08/2020] [Indexed: 12/12/2022] Open
Abstract
Fourier transform infrared (FTIR) microspectroscopy was used to evaluate the growth of human melanoma cells (SK-MEL-2) in two-dimensional (2D) versus three-dimensional (3D) spheroid culture systems. FTIR microspectroscopy, coupled with multivariate analysis, could be used to monitor the variability of spheroid morphologies prepared from different cell densities. The characteristic shift in absorbance bands of the 2D cells were different from the spectra of cells from 3D spheroids. FTIR microspectroscopy can also be used to monitor cell death similar to fluorescence cell staining in 3D spheroids. A change in the secondary structure of protein was observed in cells from the 3D spheroid versus the 2D culture system. FTIR microspectroscopy can detect specific alterations in the biological components inside the spheroid, which cannot be detected using fluorescence cell death staining. In the cells from 3D spheroids, the respective lipid, DNA, and RNA region content represent specific markers directly proportional to the spheroid size and central area of necrotic cell death, which can be confirmed using unsupervised PCA and hierarchical cluster analysis. FTIR microspectroscopy could be used as an alternative tool for spheroid cell culture discrimination, and validation of the usual biochemical technique.
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Affiliation(s)
- Tarapong Srisongkram
- Research and Development in Pharmaceuticals Program, Graduate School, Faculty of Pharmaceutical Sciences, Khon Kaen University, Khon Kaen 40002, Thailand;
| | - Natthida Weerapreeyakul
- Division of Pharmaceutical Chemistry, Faculty of Pharmaceutical Sciences, Khon Kaen University, Khon Kaen 40002, Thailand
- Human High Performance and Health Promotion Research Institute, Khon Kaen University, Khon Kaen 40002, Thailand
- Correspondence: ; Tel.: +66-43-202-378
| | - Kanjana Thumanu
- Synchrotron Light Research Institute (Public Organization), Nakhon Ratchasima 30000, Thailand;
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Chan KLA, Altharawi A, Fale P, Song CL, Kazarian SG, Cinque G, Untereiner V, Sockalingum GD. Transmission Fourier Transform Infrared Spectroscopic Imaging, Mapping, and Synchrotron Scanning Microscopy with Zinc Sulfide Hemispheres on Living Mammalian Cells at Sub-Cellular Resolution. APPLIED SPECTROSCOPY 2020; 74:544-552. [PMID: 32031010 DOI: 10.1177/0003702819898275] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Fourier transform infrared (FT-IR) spectroscopic imaging and microscopy of single living cells are established label-free technique for the study of cell biology. The constant driver to improve the spatial resolution of the technique is due to the diffraction limit given by infrared (IR) wavelength making subcellular study challenging. Recently, we have reported, with the use of a prototype zinc sulfide (ZnS) transmission cell made of two hemispheres, that the spatial resolution is improved by the factor of the refractive index of ZnS, achieving a λ/2.7 spatial resolution using the synchrotron-IR microscopy with a 36× objective with numerical aperture of 0.5. To refine and to demonstrate that the ZnS hemisphere transmission device can be translated to standard bench-top FT-IR imaging systems, we have, in this work, modified the device to achieve a more precise path length, which has improved the spectral quality of the living cells, and showed for the first time that the device can be applied to study live cells with three different bench-top FT-IR imaging systems. We applied focal plane array (FPA) imaging, linear array, and a synchrotron radiation single-point scanning method and demonstrated that in all cases, subcellular details of individual living cells can be obtained. Results have shown that imaging with the FPA detector can measure the largest area in a given time, while measurements from the scanning methods produced a smoother image. Synchrotron radiation single-point mapping produced the best quality image and has the flexibility to introduce over sampling to produce images of cells with great details, but it is time consuming in scanning mode. In summary, this work has demonstrated that the ZnS hemispheres can be applied in all three spectroscopic approaches to improve the spatial resolution without any modification to the existing microscopes.
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Affiliation(s)
- Ka Lung Andrew Chan
- Institute of Pharmaceutical Science, School of Cancer and Pharmaceutical Sciences, King's College London, UK
| | - Ali Altharawi
- Institute of Pharmaceutical Science, School of Cancer and Pharmaceutical Sciences, King's College London, UK
| | - Pedro Fale
- Faculty of Sciences, BioISI-Biosystems & Integrative Sciences Institute, University of Lisboa, Lisbon, Portugal
| | - Cai Li Song
- Department of Chemical Engineering, Imperial College London, London, UK
| | - Sergei G Kazarian
- Department of Chemical Engineering, Imperial College London, London, UK
| | | | - Valérie Untereiner
- Plateforme en Imagerie Cellulaire et Tissulaire (PICT), University of Reims Champagne-Ardenne, Reims, France
- University of Reims Champagne-Ardenne, Pharmacy, Reims, France
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8
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Effects of Cannabis Use on the Protein and Lipid Profile of Olfactory Neuroepithelium Cells from Schizophrenia Patients Studied by Synchrotron-Based FTIR Spectroscopy. Biomolecules 2020; 10:biom10020329. [PMID: 32092878 PMCID: PMC7072126 DOI: 10.3390/biom10020329] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2020] [Revised: 02/12/2020] [Accepted: 02/15/2020] [Indexed: 12/14/2022] Open
Abstract
Schizophrenia (SCZ) is a neurodevelopmental disorder with a high genetic component, but the presence of environmental stressors can be important for its onset and progression. Cannabis use can be a major risk factor for developing SCZ. However, despite the available data on the neurobiological underpinnings of SCZ, there is an important lack of studies in human neuronal tissue and living cells addressing the effects of cannabis in SCZ patients. In this study, we analysed the most relevant bio-macromolecular constituents in olfactory neuroepithelium (ON) cells of healthy controls non-cannabis users, healthy cannabis users, SCZ patients non-cannabis users, and SCZ patients cannabis users using Synchrotron Radiation-Fourier Transform Infrared (SR-FTIR) spectrometry and microscopy. Our results revealed that SCZ patients non-cannabis users, and healthy cannabis users exhibit similar alterations in the macromolecular profile of ON cells, including disruption in lipid composition, increased lipid membrane renewal rate and lipid peroxidation, altered proteins containing more β-sheet structures, and showed an increase in DNA and histone methylation. Notably, these alterations were not observed in SCZ patients who use cannabis regularly. These data suggest a differential effect of cannabis in healthy controls and in SCZ patients in terms of the macromolecular constituents of ON cells.
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Clède S, Sandt C, Dumas P, Policar C. Monitoring the Kinetics of the Cellular Uptake of a Metal Carbonyl Conjugated with a Lipidic Moiety in Living Cells Using Synchrotron Infrared Spectromicroscopy. APPLIED SPECTROSCOPY 2020; 74:63-71. [PMID: 31617373 DOI: 10.1177/0003702819877260] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Presented here is the exploitation of synchrotron infrared spectromicroscopy to evaluate the feasibility of monitoring the cellular uptake of rhenium-tris-carbonyl-tagged (Re(CO)3) lipophilic chains in living cells. To this aim, an in-house thermostated microfluidic device was used to limit water absorption while keeping cells alive. Indeed, cells showed a high survival rate in the microfluidic device over the course of the experiment, proving the short-term biocompatibility of the device. We recorded spectra of single, living, fully hydrated breast cancer MDA-MB231 cells and could follow the penetration of the rhenium complexes for up to 2 h. Despite the strong variations observed in the uptake kinetics between individual cells, the Re(CO)3 complex was traced inside the cells at low concentration and shown to enter them on the hour time scale by active transport.
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Affiliation(s)
- Sylvain Clède
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, PSL University, Sorbonne université, Paris, France
| | - Christophe Sandt
- SMIS beamline, SOLEIL synchrotron, L'orme des Merisiers, Gif sur Yvette, France
| | - Paul Dumas
- SMIS beamline, SOLEIL synchrotron, L'orme des Merisiers, Gif sur Yvette, France
| | - Clotilde Policar
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, PSL University, Sorbonne université, Paris, France
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10
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Grenci G, Bertocchi C, Ravasio A. Integrating Microfabrication into Biological Investigations: the Benefits of Interdisciplinarity. MICROMACHINES 2019; 10:E252. [PMID: 30995747 PMCID: PMC6523848 DOI: 10.3390/mi10040252] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/25/2019] [Revised: 04/08/2019] [Accepted: 04/13/2019] [Indexed: 12/14/2022]
Abstract
The advent of micro and nanotechnologies, such as microfabrication, have impacted scientific research and contributed to meaningful real-world applications, to a degree seen during historic technological revolutions. Some key areas benefitting from the invention and advancement of microfabrication platforms are those of biological and biomedical sciences. Modern therapeutic approaches, involving point-of-care, precision or personalized medicine, are transitioning from the experimental phase to becoming the standard of care. At the same time, biological research benefits from the contribution of microfluidics at every level from single cell to tissue engineering and organoids studies. The aim of this commentary is to describe, through proven examples, the interdisciplinary process used to develop novel biological technologies and to emphasize the role of technical knowledge in empowering researchers who are specialized in a niche area to look beyond and innovate.
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Affiliation(s)
- Gianluca Grenci
- Mechanobiology Institute (MBI), National University of Singapore, Singapore 117411, Singapore.
- Biomedical Engineering Department, National University of Singapore, Singapore 117583, Singapore.
| | - Cristina Bertocchi
- Department of Physiology, School of Biological Sciences, Pontificia Universidad Católica de Chile, Santiago 8330025, Chile.
| | - Andrea Ravasio
- Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago 7820436, Chile.
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Hostachy S, Masuda M, Miki T, Hamachi I, Sagan S, Lequin O, Medjoubi K, Somogyi A, Delsuc N, Policar C. Graftable SCoMPIs enable the labeling and X-ray fluorescence imaging of proteins. Chem Sci 2018; 9:4483-4487. [PMID: 29896390 PMCID: PMC5958345 DOI: 10.1039/c8sc00886h] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2018] [Accepted: 04/13/2018] [Indexed: 11/21/2022] Open
Abstract
Bio-imaging techniques alternative to fluorescence microscopy are gaining increasing interest as complementary tools to visualize and analyze biological systems. Among them, X-ray fluorescence microspectroscopy provides information on the local content and distribution of heavy elements (Z ≥ 14) in cells or biological samples. In this context, similar tools to those developed for fluorescence microscopy are desired, including chemical probes or tags. In this work, we study rhenium complexes as a convenient and sensitive probe for X-ray fluorescence microspectroscopy. We demonstrate their ability to label and sense exogenously incubated or endogenous proteins inside cells.
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Affiliation(s)
- Sarah Hostachy
- Laboratoire des Biomolécules, LBM , Département de Chimie , École Normale Supérieure , PSL University , Sorbonne Université , CNRS , 75005 Paris , France .
| | - Marie Masuda
- Department of Synthetic Chemistry and Biological Chemistry , Graduate School of Engineering , Kyoto University , Kyoto 615-8510 , Japan
| | - Takayuki Miki
- Department of Synthetic Chemistry and Biological Chemistry , Graduate School of Engineering , Kyoto University , Kyoto 615-8510 , Japan
| | - Itaru Hamachi
- Department of Synthetic Chemistry and Biological Chemistry , Graduate School of Engineering , Kyoto University , Kyoto 615-8510 , Japan
| | - Sandrine Sagan
- Sorbonne Université , École Normale Supérieure , PSL University , CNRS , Laboratoire des Biomolécules, LBM , 75005 Paris , France
| | - Olivier Lequin
- Sorbonne Université , École Normale Supérieure , PSL University , CNRS , Laboratoire des Biomolécules, LBM , 75005 Paris , France
| | - Kadda Medjoubi
- Nanoscopium Synchrotron SOLEIL Saint-Aubin , 91192 , Gif-sur-Yvette Cedex , France
| | - Andrea Somogyi
- Nanoscopium Synchrotron SOLEIL Saint-Aubin , 91192 , Gif-sur-Yvette Cedex , France
| | - Nicolas Delsuc
- Laboratoire des Biomolécules, LBM , Département de Chimie , École Normale Supérieure , PSL University , Sorbonne Université , CNRS , 75005 Paris , France .
| | - Clotilde Policar
- Laboratoire des Biomolécules, LBM , Département de Chimie , École Normale Supérieure , PSL University , Sorbonne Université , CNRS , 75005 Paris , France .
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12
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Doncel-Pérez E, Ellis G, Sandt C, Shuttleworth PS, Bastida A, Revuelta J, García-Junceda E, Fernández-Mayoralas A, Garrido L. Biochemical profiling of rat embryonic stem cells grown on electrospun polyester fibers using synchrotron infrared microspectroscopy. Anal Bioanal Chem 2018; 410:3649-3660. [PMID: 29671028 PMCID: PMC5956007 DOI: 10.1007/s00216-018-1049-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Revised: 03/02/2018] [Accepted: 03/28/2018] [Indexed: 01/10/2023]
Abstract
Therapeutic options for spinal cord injuries are severely limited; current treatments only offer symptomatic relief and rehabilitation focused on educating the individual on how to adapt to their new situation to make best possible use of their remaining function. Thus, new approaches are needed, and interest in the development of effective strategies to promote the repair of neural tracts in the central nervous system inspired us to prepare functional and highly anisotropic polymer scaffolds. In this work, an initial assessment of the behavior of rat neural progenitor cells (NPCs) seeded on poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) fiber scaffolds using synchrotron-based infrared microspectroscopy (SIRMS) is described. Combined with a modified touch imprint cytology sample preparation method, this application of SIRMS enabled the biochemical profiles of NPCs on the coated polymer fibers to be determined. The results showed that changes in the lipid and amide I–II spectral regions are modulated by the type and coating of the substrate used and the culture time. SIRMS studies can provide valuable insight into the early-stage response of NPCs to the morphology and surface chemistry of a biomaterial, and could therefore be a useful tool in the preparation and optimization of cellular scaffolds. Synchrotron IR microspectroscopy can provide insight into the response of neural progenitor cells to synthetic scaffolds ![]()
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Affiliation(s)
- Ernesto Doncel-Pérez
- Grupo de Química Neuro-Regenerativa, Hospital Nacional de Parapléjicos, Servicio de Salud de Castilla La Mancha (SESCAM), 45071, Toledo, Spain
| | - Gary Ellis
- Instituto de Ciencia y Tecnología de Polímeros, Consejo Superior de Investigaciones Científicas (ICTP-CSIC), Juan de la Cierva 3, 28006, Madrid, Spain
| | - Christophe Sandt
- Synchrotron SOLEIL, L'Orme des Merisiers, Saint Aubin BP 48, 91192, Gif-sur-Yvette, France
| | - Peter S Shuttleworth
- Instituto de Ciencia y Tecnología de Polímeros, Consejo Superior de Investigaciones Científicas (ICTP-CSIC), Juan de la Cierva 3, 28006, Madrid, Spain
| | - Agatha Bastida
- Instituto de Química Orgánica General, Consejo Superior de Investigaciones Científicas (IQOG-CSIC), Juan de la Cierva 3, 28006, Madrid, Spain
| | - Julia Revuelta
- Instituto de Química Orgánica General, Consejo Superior de Investigaciones Científicas (IQOG-CSIC), Juan de la Cierva 3, 28006, Madrid, Spain
| | - Eduardo García-Junceda
- Instituto de Química Orgánica General, Consejo Superior de Investigaciones Científicas (IQOG-CSIC), Juan de la Cierva 3, 28006, Madrid, Spain
| | - Alfonso Fernández-Mayoralas
- Instituto de Química Orgánica General, Consejo Superior de Investigaciones Científicas (IQOG-CSIC), Juan de la Cierva 3, 28006, Madrid, Spain
| | - Leoncio Garrido
- Instituto de Ciencia y Tecnología de Polímeros, Consejo Superior de Investigaciones Científicas (ICTP-CSIC), Juan de la Cierva 3, 28006, Madrid, Spain.
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Devaux MF, Jamme F, André W, Bouchet B, Alvarado C, Durand S, Robert P, Saulnier L, Bonnin E, Guillon F. Synchrotron Time-Lapse Imaging of Lignocellulosic Biomass Hydrolysis: Tracking Enzyme Localization by Protein Autofluorescence and Biochemical Modification of Cell Walls by Microfluidic Infrared Microspectroscopy. FRONTIERS IN PLANT SCIENCE 2018. [PMID: 29515611 PMCID: PMC5826215 DOI: 10.3389/fpls.2018.00200] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Tracking enzyme localization and following the local biochemical modification of the substrate should help explain the recalcitrance of lignocellulosic plant cell walls to enzymatic degradation. Time-lapse studies using conventional imaging require enzyme labeling and following the biochemical modifications of biopolymers found in plant cell walls, which cannot be easily achieved. In the present work, synchrotron facilities have been used to image the enzymatic degradation of lignocellulosic biomass without labeling the enzyme or the cell walls. Multichannel autofluorescence imaging of the protein and phenolic compounds after excitation at 275 nm highlighted the presence or absence of enzymes on cell walls and made it possible to track them during the reaction. Image analysis was used to quantify the fluorescence intensity variations. Consistent variations in the enzyme concentration were found locally for cell cavities and their surrounding cell walls. Microfluidic FT-IR microspectroscopy allowed for time-lapse tracking of local changes in the polysaccharides in cell walls during degradation. Hemicellulose degradation was found to occur prior to cellulose degradation using a Celluclast® preparation. Combining the fluorescence and FT-IR information yielded the conclusion that enzymes did not bind to lignified cell walls, which were consequently not degraded. Fluorescence multiscale imaging and FT-IR microspectroscopy showed an unexpected variability both in the initial biochemical composition and the degradation pattern, highlighting micro-domains in the cell wall of a given cell. Fluorescence intensity quantification showed that the enzymes were not evenly distributed, and their amount increased progressively on degradable cell walls. During degradation, adjacent cells were separated and the cell wall fragmented until complete degradation.
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Affiliation(s)
- Marie-Françoise Devaux
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
- *Correspondence: Marie-Françoise Devaux
| | | | | | - Brigitte Bouchet
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
| | - Camille Alvarado
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
| | - Sylvie Durand
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
| | - Paul Robert
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
| | - Luc Saulnier
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
| | - Estelle Bonnin
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
| | - Fabienne Guillon
- UR1268 Biopolymères Interactions et Assemblages, Institut National de la Recherche Agronomique Pays de la Loire, Nantes, France
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Xin X, Huang G, Liu X, An C, Yao Y, Weger H, Zhang P, Chen X. Molecular toxicity of triclosan and carbamazepine to green algae Chlorococcum sp.: A single cell view using synchrotron-based Fourier transform infrared spectromicroscopy. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2017; 226:12-20. [PMID: 28399502 DOI: 10.1016/j.envpol.2017.04.007] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2017] [Revised: 04/03/2017] [Accepted: 04/03/2017] [Indexed: 05/23/2023]
Abstract
Although pharmaceuticals and personal care products have been used and introduced into the environment in large quantities, little information on potential ecological risks is currently available considering their effects on living organisms. We verified the feasibility of using synchrotron-based Fourier Transform Infrared (SR-FTIR) spectromicroscopy to explore in vivo toxic effects on single living Chlorococcum sp. cells. The study provided important information to achieve a better understanding of the toxic mechanism of triclosan and carbamazepine on living algae Chlorococcum sp.. Triclosan and carbamazepine had distinctive toxic effects on unicellular living algae. Most strikingly, triclosan had more dramatic toxic effects on biochemical components than carbamazepine. Triclosan can affect algae primarily by inhibiting fatty acid synthesis and causing protein aggregation. The toxicity response was irreversible at higher concentration (100.000 μM), but attenuated at lower concentration (0.391 μM) as time extended. Carbamazepine can produce hydrophobic interactions to affect the phospholipid bilayer and work on specific proteins to disfunction the cell membrane. Carbamazepine-exposed cells developed a resistance while extending exposure time. This is the first demonstration from an ecological standpoint that SR-FTIR can provide an innovative approach to reveal the toxicity of emerging pollutants in aquatic environments.
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Affiliation(s)
- Xiaying Xin
- Institute for Energy, Environment and Sustainable Communities, University of Regina, Regina, Saskatchewan S4S 0A2, Canada
| | - Guohe Huang
- Institute for Energy, Environment and Sustainable Communities, University of Regina, Regina, Saskatchewan S4S 0A2, Canada.
| | - Xia Liu
- Canadian Light Source, Saskatoon, Saskatchewan S7N 2V3, Canada
| | - Chunjiang An
- Institute for Energy, Environment and Sustainable Communities, University of Regina, Regina, Saskatchewan S4S 0A2, Canada
| | - Yao Yao
- Institute for Energy, Environment and Sustainable Communities, University of Regina, Regina, Saskatchewan S4S 0A2, Canada
| | - Harold Weger
- Department of Biology, University of Regina, Regina, Saskatchewan S4S 0A2, Canada
| | - Peng Zhang
- Institute for Energy, Environment and Sustainable Communities, University of Regina, Regina, Saskatchewan S4S 0A2, Canada
| | - Xiujuan Chen
- Institute for Energy, Environment and Sustainable Communities, University of Regina, Regina, Saskatchewan S4S 0A2, Canada
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16
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Vibrational spectroscopies to investigate concretions and ectopic calcifications for medical diagnosis. CR CHIM 2016. [DOI: 10.1016/j.crci.2016.05.011] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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17
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18
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Birarda G, Ravasio A, Suryana M, Maniam S, Holman HYN, Grenci G. IR-Live: fabrication of a low-cost plastic microfluidic device for infrared spectromicroscopy of living cells. LAB ON A CHIP 2016; 16:1644-1651. [PMID: 27040369 DOI: 10.1039/c5lc01460c] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Water is a strong mid-infrared absorber, which has hindered the full exploitation of label-free and non-invasive infrared (IR) spectromicroscopy techniques for the study of living biological samples. To overcome this barrier, many researchers have built sophisticated fluidic chambers or microfluidic chips wherein the depth of the liquid medium in the sample compartment is limited to 10 μm or less. Here we report an innovative and simple way to fabricate plastic devices with infrared transparent view-ports enabling infrared spectromicroscopy of living biological samples; therefore the device is named "IR-Live". Advantages of this approach include lower production costs, a minimal need to access a micro-fabrication facility, and unlimited mass or waste exchange for the living samples surrounding the view-port area. We demonstrate that the low-cost IR-Live in combination with microfluidic perfusion techniques enables long term (>60 h) cell culture, which broadens the capability of IR spectromicroscopy for studying living biological samples. To illustrate this, we first applied the device to study protein and lipid polarity in migrating REF52 fibroblasts by collecting 2-dimensional spectral chemical maps at a micrometer spatial resolution. Then, we demonstrated the suitability of our approach to study dynamic cellular events by collecting a time series of spectral maps of U937 monocytes during the early stage of cell attachment to a bio-compatible surface.
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Affiliation(s)
- G Birarda
- Berkeley Synchrotron Infrared Structural Biology Program, Lawrence Berkeley National Laboratory, 1 Cyclotron road, 94720 Berkeley, USA and Elettra - Sincrotrone Trieste, Strada Statale 14 - km 163, 5 in AREA Science Park, 34149 Basovizza, Trieste, Italy
| | - A Ravasio
- Mechanobiology Institute (MBI), National University of Singapore, 5A Engineering Drive 1, 117411 Singapore, Singapore.
| | - M Suryana
- Mechanobiology Institute (MBI), National University of Singapore, 5A Engineering Drive 1, 117411 Singapore, Singapore.
| | - S Maniam
- Mechanobiology Institute (MBI), National University of Singapore, 5A Engineering Drive 1, 117411 Singapore, Singapore.
| | - H-Y N Holman
- Berkeley Synchrotron Infrared Structural Biology Program, Lawrence Berkeley National Laboratory, 1 Cyclotron road, 94720 Berkeley, USA
| | - G Grenci
- Mechanobiology Institute (MBI), National University of Singapore, 5A Engineering Drive 1, 117411 Singapore, Singapore.
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19
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Sandt C, Nadaradjane C, Richards R, Dumas P, Sée V. Use of infrared microspectroscopy to elucidate a specific chemical signature associated with hypoxia levels found in glioblastoma. Analyst 2016; 141:870-83. [DOI: 10.1039/c5an02112j] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Detection of the chemical signature associated with hypoxia in single glioblastoma cells by synchrotron infrared microspectroscopy.
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Affiliation(s)
- Christophe Sandt
- Synchrotron SOLEIL
- L'Orme des Merisiers
- 91192 Gif sur Yvette
- France
| | - Céline Nadaradjane
- Synchrotron SOLEIL
- L'Orme des Merisiers
- 91192 Gif sur Yvette
- France
- Department of Biochemistry
| | - Rosalie Richards
- Department of Biochemistry
- Institute of Integrative Biology
- University of Liverpool
- Liverpool
- UK
| | - Paul Dumas
- Synchrotron SOLEIL
- L'Orme des Merisiers
- 91192 Gif sur Yvette
- France
| | - Violaine Sée
- Department of Biochemistry
- Institute of Integrative Biology
- University of Liverpool
- Liverpool
- UK
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20
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Santoro G, Zlateva T, Ruggi A, Quaroni L, Zobi F. Synthesis, characterization and cellular location of cytotoxic constitutional organometallic isomers of rhenium delivered on a cyanocobalmin scaffold. Dalton Trans 2015; 44:6999-7008. [DOI: 10.1039/c4dt03598d] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Constitutional isomers based on vitamin B12 and a fluorescent rhenium diimine complex were prepared, characterized, tested against PC-3 prostate cancer cells and investigated via IR spectromicroscopy for cellular uptake by live 3T3 fibroblasts.
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Affiliation(s)
- Giuseppe Santoro
- Department of Chemistry
- University of Fribourg
- CH-1700 Fribourg
- Switzerland
| | | | - Albert Ruggi
- Department of Chemistry
- University of Fribourg
- CH-1700 Fribourg
- Switzerland
| | | | - Fabio Zobi
- Department of Chemistry
- University of Fribourg
- CH-1700 Fribourg
- Switzerland
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21
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Chwiej J, Skoczen A, Janeczko K, Kutorasinska J, Matusiak K, Figiel H, Dumas P, Sandt C, Setkowicz Z. The biochemical changes in hippocampal formation occurring in normal and seizure experiencing rats as a result of a ketogenic diet. Analyst 2015; 140:2190-204. [DOI: 10.1039/c4an01857e] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this study, ketogenic diet-induced biochemical changes occurring in normal and epileptic hippocampal formations were compared.
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Affiliation(s)
- Joanna Chwiej
- AGH-University of Science and Technology
- Faculty of Physics and Applied Computer Science
- Krakow
- Poland
| | - Agnieszka Skoczen
- AGH-University of Science and Technology
- Faculty of Physics and Applied Computer Science
- Krakow
- Poland
| | | | - Justyna Kutorasinska
- AGH-University of Science and Technology
- Faculty of Physics and Applied Computer Science
- Krakow
- Poland
| | - Katarzyna Matusiak
- AGH-University of Science and Technology
- Faculty of Physics and Applied Computer Science
- Krakow
- Poland
| | - Henryk Figiel
- AGH-University of Science and Technology
- Faculty of Physics and Applied Computer Science
- Krakow
- Poland
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Clède S, Policar C. Metal-carbonyl units for vibrational and luminescence imaging: towards multimodality. Chemistry 2014; 21:942-58. [PMID: 25376740 DOI: 10.1002/chem.201404600] [Citation(s) in RCA: 65] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Metal-carbonyl complexes are attractive structures for bio-imaging. In addition to unique vibrational properties due to the CO moieties enabling IR and Raman cell imaging, the appropriate choice of ancillary ligands opens up the opportunity for luminescence detection. Through a classification by techniques, past and recent developments in the application of metal-carbonyl complexes for vibrational and luminescence bio-imaging are reviewed. Finally, their potential as bimodal IR and luminescent probes is addressed.
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Affiliation(s)
- Sylvain Clède
- Ecole Normale Supérieure, PSL Research University, Département de Chimie, Sorbonne Universités-UPMC Univ Paris 06, CNRS-ENS-UPMC, Laboratoire des Biomolécules, UMR7203, 24, rue Lhomond, 75005 Paris (France), Fax: (+33) 1-4432-3389
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23
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Barabas ME, Mattson EC, Aboualizadeh E, Hirschmugl CJ, Stucky CL. Chemical structure and morphology of dorsal root ganglion neurons from naive and inflamed mice. J Biol Chem 2014; 289:34241-9. [PMID: 25271163 DOI: 10.1074/jbc.m114.570101] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Fourier transform infrared spectromicroscopy provides label-free imaging to detect the spatial distribution of the characteristic functional groups in proteins, lipids, phosphates, and carbohydrates simultaneously in individual DRG neurons. We have identified ring-shaped distributions of lipid and/or carbohydrate enrichment in subpopulations of neurons which has never before been reported. These distributions are ring-shaped within the cytoplasm and are likely representative of the endoplasmic reticulum. The prevalence of chemical ring subtypes differs between large- and small-diameter neurons. Peripheral inflammation increased the relative lipid content specifically in small-diameter neurons, many of which are nociceptive. Because many small-diameter neurons express an ion channel involved in inflammatory pain, transient receptor potential ankyrin 1 (TRPA1), we asked whether this increase in lipid content occurs in TRPA1-deficient (knock-out) neurons. No statistically significant change in lipid content occurred in TRPA1-deficient neurons, indicating that the inflammation-mediated increase in lipid content is largely dependent on TRPA1. Because TRPA1 is known to mediate mechanical and cold sensitization that accompanies peripheral inflammation, our findings may have important implications for a potential role of lipids in inflammatory pain.
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Affiliation(s)
- Marie E Barabas
- From the Department of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin 53226-0509 and
| | - Eric C Mattson
- the Department of Physics, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin 53211
| | - Ebrahim Aboualizadeh
- the Department of Physics, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin 53211
| | - Carol J Hirschmugl
- the Department of Physics, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin 53211
| | - Cheryl L Stucky
- From the Department of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin 53226-0509 and
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Mattson EC, Unger M, Clède S, Lambert F, Policar C, Imtiaz A, D'Souza R, Hirschmugl CJ. Toward optimal spatial and spectral quality in widefield infrared spectromicroscopy of IR labelled single cells. Analyst 2014; 138:5610-8. [PMID: 23826609 DOI: 10.1039/c3an00383c] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Advancements in widefield infrared spectromicroscopy have recently been demonstrated following the commissioning of IRENI (InfraRed ENvironmental Imaging), a Fourier Transform infrared (FTIR) chemical imaging beamline at the Synchrotron Radiation Center. The present study demonstrates the effects of magnification, spatial oversampling, spectral pre-processing and deconvolution, focusing on the intracellular detection and distribution of an exogenous metal tris-carbonyl derivative 1 in a single MDA-MB-231 breast cancer cell. We demonstrate here that spatial oversampling for synchrotron-based infrared imaging is critical to obtain accurate diffraction-limited images at all wavelengths simultaneously. Resolution criteria and results from raw and deconvoluted images for two Schwarzschild objectives (36×, NA 0.5 and 74×, NA 0.65) are compared to each other and to prior reports for raster-scanned, confocal microscopes. The resolution of the imaging data can be improved by deconvolving the instrumental broadening that is determined with the measured PSFs, which is implemented with GPU programming architecture for fast hyperspectral processing. High definition, rapidly acquired, FTIR chemical images of respective spectral signatures of the cell 1 and shows that 1 is localized next to the phosphate- and Amide-rich regions, in agreement with previous infrared and luminescence studies. The infrared image contrast, localization and definition are improved after applying proven spectral pre-processing (principal component analysis based noise reduction and RMie scattering correction algorithms) to individual pixel spectra in the hyperspectral cube.
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Affiliation(s)
- Eric C Mattson
- Physics Dept., University of Wisconsin-Milwaukee, Milwaukee, WI, USA.
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25
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Clède S, Policar C, Sandt C. Fourier transform infrared (FT-IR) spectromicroscopy to identify cell organelles: correlation with fluorescence staining in MCF-7 breast cancer cells. APPLIED SPECTROSCOPY 2014; 68:113-117. [PMID: 24405961 DOI: 10.1366/13-07139] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Biomolecules display specific vibrational signatures in the infrared (IR) range, and organelles that concentrate these biomolecules can be identified by these IR signatures. Subcellular identification and location of cell organelles using IR signatures is attractive as it does not require the use of any specific trackers and is thus non-invasive and non-destructive. We show here that endogenous IR absorptions are relevant to detecting and imaging the nucleus, the cytoplasm, and the Golgi apparatus/endoplasmic reticulum in MCF-7 breast cancer cells, and we compare these results with our previous work on the HeLa cell line. We correlate maps of fixed and dried cells obtained by synchrotron radiation Fourier transform infrared (SR FT-IR) spectromicroscopy with epifluorescence images using fluorescent trackers for Golgi apparatus and nucleus, namely BODIPY TR C5-ceramide complexed to BSA and DAPI, respectively. Interestingly, the ratios of the IR bands CH2 : CH3 (both asymmetric and symmetric) and CO((ester)):amide I were shown to be reliable gauges of the lipidic character of a cellular compartment, the -CH2 and the CO((ester)) absorptions increasing with the presence of inner membranes like in the Golgi apparatus.
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26
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Cao J, Ng ES, McNaughton D, Stanley EG, Elefanty AG, Tobin MJ, Heraud P. The characterisation of pluripotent and multipotent stem cells using Fourier transform infrared microspectroscopy. Int J Mol Sci 2013; 14:17453-76. [PMID: 24065090 PMCID: PMC3794735 DOI: 10.3390/ijms140917453] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2013] [Revised: 07/22/2013] [Accepted: 07/22/2013] [Indexed: 01/08/2023] Open
Abstract
Fourier transform infrared (FTIR) microspectroscopy shows potential as a benign, objective and rapid tool to screen pluripotent and multipotent stem cells for clinical use. It offers a new experimental approach that provides a holistic measurement of macromolecular composition such that a signature representing the internal cellular phenotype is obtained. The use of this technique therefore contributes information that is complementary to that acquired by conventional genetic and immunohistochemical methods.
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Affiliation(s)
- Julie Cao
- Department of Anatomy and Developmental Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Wellington Road, Clayton, Victoria 3800, Australia; E-Mails: (J.C.); (E.S.N.); (E.G.S.); (A.G.E.)
- Centre for Biospectroscopy and the School of Chemistry, Monash University, Clayton, Victoria 3800, Australia; E-Mail:
| | - Elizabeth S. Ng
- Department of Anatomy and Developmental Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Wellington Road, Clayton, Victoria 3800, Australia; E-Mails: (J.C.); (E.S.N.); (E.G.S.); (A.G.E.)
- Murdoch Childrens Research Institute, the Royal Children’s Hospital, Parkville, Victoria 3052, Australia
| | - Donald McNaughton
- Centre for Biospectroscopy and the School of Chemistry, Monash University, Clayton, Victoria 3800, Australia; E-Mail:
| | - Edouard G. Stanley
- Department of Anatomy and Developmental Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Wellington Road, Clayton, Victoria 3800, Australia; E-Mails: (J.C.); (E.S.N.); (E.G.S.); (A.G.E.)
- Murdoch Childrens Research Institute, the Royal Children’s Hospital, Parkville, Victoria 3052, Australia
| | - Andrew G. Elefanty
- Department of Anatomy and Developmental Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Wellington Road, Clayton, Victoria 3800, Australia; E-Mails: (J.C.); (E.S.N.); (E.G.S.); (A.G.E.)
- Murdoch Childrens Research Institute, the Royal Children’s Hospital, Parkville, Victoria 3052, Australia
| | - Mark J. Tobin
- Australian Synchrotron, 800 Blackburn Road, Clayton, Victoria 3168, Australia; E-Mail:
| | - Philip Heraud
- Department of Anatomy and Developmental Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Wellington Road, Clayton, Victoria 3800, Australia; E-Mails: (J.C.); (E.S.N.); (E.G.S.); (A.G.E.)
- Centre for Biospectroscopy and the School of Chemistry, Monash University, Clayton, Victoria 3800, Australia; E-Mail:
- Author to whom correspondence should be addressed; E-Mail: ; Tel.: +61-3-9905-0765; Fax: +61-3-9905-5613
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27
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Clède S, Lambert F, Sandt C, Kascakova S, Unger M, Harté E, Plamont MA, Saint-Fort R, Deniset-Besseau A, Gueroui Z, Hirschmugl C, Lecomte S, Dazzi A, Vessières A, Policar C. Detection of an estrogen derivative in two breast cancer cell lines using a single core multimodal probe for imaging (SCoMPI) imaged by a panel of luminescent and vibrational techniques. Analyst 2013; 138:5627-38. [DOI: 10.1039/c3an00807j] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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