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Dillion Lima Cavalcanti I, Humberto Xavier Junior F, Stela Santos Magalhães N, Cajubá de Britto Lira Nogueira M. ISOTHERMAL TITRATION CALORIMETRY (ITC) AS A PROMISING TOOL IN PHARMACEUTICAL NANOTECHNOLOGY. Int J Pharm 2023; 641:123063. [PMID: 37209790 DOI: 10.1016/j.ijpharm.2023.123063] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 05/10/2023] [Accepted: 05/13/2023] [Indexed: 05/22/2023]
Abstract
Isothermal titration calorimetry (ITC) is a technique for evaluating the thermodynamic profiles of connection between two molecules, allowing the experimental design of nanoparticles systems with drugs and/or biological molecules. Taking into account the relevance of ITC, we conducted, therefore, an integrative revision of the literature, from 2000 to 2023, on the main purposes of using this technique in pharmaceutical nanotechnology. The search were carried out in the Pubmed, Sciencedirect, Web of Science, and Scifinder databases using the descriptors "Nanoparticles", "Isothermal Titration Calorimetry", and "ITC". We have observed that the ITC technique has been increasingly used in pharmaceutical nanotechnology, seeking to understand the interaction mechanisms in the formation of nanoparticles. Additionally, to understand the behavior of nanoparticles with biological materials (proteins, DNA, cell membranes, among others), thereby helping to understand the behavior of nanocarriers in vivo studies. As a contribution, we intended to reveal the importance of ITC in the laboratory routine, which is itself a quick and easy technique to obtain relevant results that help to optimize the nanosystems formulation process.
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Affiliation(s)
- Iago Dillion Lima Cavalcanti
- Keizo Asami Institute (iLIKA), Federal University of Pernambuco (UFPE), Av. Prof. Moraes Rego - Cidade Universitária, Recife - PE, Brazil
| | - Francisco Humberto Xavier Junior
- Keizo Asami Institute (iLIKA), Federal University of Pernambuco (UFPE), Av. Prof. Moraes Rego - Cidade Universitária, Recife - PE, Brazil; Department of Pharmacy, Pharmaceutical Biotechnology Laboratory (BioTecFarm), Federal University of Paraíba (UFPB), Campus I Lot. Cidade Universitaria, PB, 58051-900, Brazil
| | - Nereide Stela Santos Magalhães
- Keizo Asami Institute (iLIKA), Federal University of Pernambuco (UFPE), Av. Prof. Moraes Rego - Cidade Universitária, Recife - PE, Brazil
| | - Mariane Cajubá de Britto Lira Nogueira
- Keizo Asami Institute (iLIKA), Federal University of Pernambuco (UFPE), Av. Prof. Moraes Rego - Cidade Universitária, Recife - PE, Brazil; Laboratory of Nanotechnology, Biotechnology and Cell Culture (NanoBioCel), Academic Center of Vitória, Federal University of Pernambuco (CAV/UFPE), R. Alto do Reservatório - Alto José Leal, Vitória de Santo Antão - PE, 55608-680, Brazil.
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2
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Kowalczyk W, Sanchez J, Kraaz P, Hutt OE, Haylock DN, Duggan PJ. The binding of boronated peptides to low affinity mammalian saccharides. Pept Sci (Hoboken) 2018. [DOI: 10.1002/pep2.23101] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
| | - Julie Sanchez
- CSIRO Manufacturing, Bag 10; Clayton South Victoria 3169 Australia
- Institut de Recherche de Chimie Paris, CNRS - Chimie ParisTech, 11 rue Pierre et Marie Curie; Paris 75005 France
| | - Phillipe Kraaz
- CSIRO Manufacturing, Bag 10; Clayton South Victoria 3169 Australia
| | - Oliver E. Hutt
- CSIRO Manufacturing, Bag 10; Clayton South Victoria 3169 Australia
| | - David N. Haylock
- CSIRO Manufacturing, Bag 10; Clayton South Victoria 3169 Australia
| | - Peter J. Duggan
- CSIRO Manufacturing, Bag 10; Clayton South Victoria 3169 Australia
- School of Chemical and Physical Sciences; Flinders University; Adelaide South Australia 5042 Australia
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3
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Samaniego Lopez C, Hebe Martínez J, Uhrig ML, Coluccio Leskow F, Spagnuolo CC. A Highly Sensitive Fluorogenic Probe for Imaging Glycoproteins and Mucine Activity in Live Cells in the Near-Infrared Region. Chemistry 2018; 24:6344-6348. [DOI: 10.1002/chem.201800790] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2018] [Indexed: 12/31/2022]
Affiliation(s)
- Cecilia Samaniego Lopez
- Departamento de Química Orgánica-CIHIDECAR-CONICET; Facultad de Ciencias Exactas y Naturales; Universidad de Buenos Aires; Int. Guiraldes 2160 1428 Ciudad de Buenos Aires Argentina
| | - Jimena Hebe Martínez
- IQUIBICEN-CONICET, Departamento de Química Biológica; Facultad de Ciencias Exactas y Naturales; Universidad de Buenos Aires; Int. Guiraldes 2160 1428 Ciudad de Buenos Aires Argentina
| | - María Laura Uhrig
- Departamento de Química Orgánica-CIHIDECAR-CONICET; Facultad de Ciencias Exactas y Naturales; Universidad de Buenos Aires; Int. Guiraldes 2160 1428 Ciudad de Buenos Aires Argentina
| | - Federico Coluccio Leskow
- IQUIBICEN-CONICET, Departamento de Química Biológica; Facultad de Ciencias Exactas y Naturales; Universidad de Buenos Aires; Int. Guiraldes 2160 1428 Ciudad de Buenos Aires Argentina
| | - Carla Cecilia Spagnuolo
- Departamento de Química Orgánica-CIHIDECAR-CONICET; Facultad de Ciencias Exactas y Naturales; Universidad de Buenos Aires; Int. Guiraldes 2160 1428 Ciudad de Buenos Aires Argentina
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4
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Wu Q, Jiang B, Weng Y, Liu J, Li S, Hu Y, Yang K, Liang Z, Zhang L, Zhang Y. 3-Carboxybenzoboroxole Functionalized Polyethylenimine Modified Magnetic Graphene Oxide Nanocomposites for Human Plasma Glycoproteins Enrichment under Physiological Conditions. Anal Chem 2018; 90:2671-2677. [DOI: 10.1021/acs.analchem.7b04451] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Qiong Wu
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Bo Jiang
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
| | - Yejing Weng
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jianxi Liu
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
- College
of Environment Science and Engineering, Fujian Normal University, Fuzhou 350007, China
| | - Senwu Li
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yechen Hu
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Kaiguang Yang
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
| | - Zhen Liang
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
| | - Lihua Zhang
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
| | - Yukui Zhang
- CAS
Key Laboratory of Separation Science for Analytical Chemistry, National
Chromatographic Research and Analysis Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
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5
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Kowalczyk W, Sanchez J, Kraaz P, Hutt OE, Haylock DN, Duggan PJ. The binding of boronated peptides to low affinity mammalian saccharides. Biopolymers 2018:e23101. [PMID: 29381187 DOI: 10.1002/bip.23101] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Revised: 12/18/2017] [Accepted: 12/20/2017] [Indexed: 11/09/2022]
Abstract
A 54-member library of boronated octapeptides, with all but the boronated residue being proteinogenic, was tested for affinity to a set of saccharides commonly found on the terminus of mammalian glycans. After experimentation with a high-throughput dye-displacement assay, attention was focused on isothermal titration calorimetry as a tool to provide reliable affinity data, including enthalpy and entropy of binding. A small number of boronated peptides showed higher affinity and significant selectivity for N-acetylneuraminic acid over methyl-α-d-galactopyranoside, methyl-α/β-l-fucopyranoside and N-acetyl-d-glucosamine. Thermodynamic data showed that for most of the boronated peptides studied, saccharide binding was associated with a significant increase in entropy, presumably resulting from the displacement of semiordered water molecules from around the sugar and/or peptide.
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Affiliation(s)
- Wioleta Kowalczyk
- CSIRO Manufacturing, Bag 10, Clayton South, Victoria, 3169, Australia
| | - Julie Sanchez
- CSIRO Manufacturing, Bag 10, Clayton South, Victoria, 3169, Australia
- Institut de Recherche de Chimie Paris, CNRS - Chimie ParisTech, 11 rue Pierre et Marie Curie, Paris, 75005, France
| | - Phillipe Kraaz
- CSIRO Manufacturing, Bag 10, Clayton South, Victoria, 3169, Australia
| | - Oliver E Hutt
- CSIRO Manufacturing, Bag 10, Clayton South, Victoria, 3169, Australia
| | - David N Haylock
- CSIRO Manufacturing, Bag 10, Clayton South, Victoria, 3169, Australia
| | - Peter J Duggan
- CSIRO Manufacturing, Bag 10, Clayton South, Victoria, 3169, Australia
- School of Chemical and Physical Sciences, Flinders University, Adelaide, South Australia, 5042, Australia
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6
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Larcher A, Lebrun A, Smietana M, Laurencin D. A multinuclear NMR perspective on the complexation between bisboronic acids and bisbenzoxaboroles with cis-diols. NEW J CHEM 2018. [DOI: 10.1039/c7nj04143h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
A new way of using solution NMR (especially 19F NMR) to study organoboron molecule/cis-diol equilibria is presented.
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Affiliation(s)
- Adèle Larcher
- Institut Charles Gerhardt de Montpellier (ICGM)
- UMR 5253
- CNRS
- Université de Montpellier
- ENSCM
| | - Aurélien Lebrun
- Institut des Biomolécules Max Mousseron (IBMM)
- UMR 5247
- CNRS
- Université de Montpellier
- ENSCM
| | - Michael Smietana
- Institut des Biomolécules Max Mousseron (IBMM)
- UMR 5247
- CNRS
- Université de Montpellier
- ENSCM
| | - Danielle Laurencin
- Institut Charles Gerhardt de Montpellier (ICGM)
- UMR 5253
- CNRS
- Université de Montpellier
- ENSCM
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7
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Li H, Zhang X, Zhang L, Cheng W, Kong F, Fan D, Li L, Wang W. Silica stationary phase functionalized by 4-carboxy-benzoboroxole with enhanced boronate affinity nature for selective capture and separation of cis-diol compounds. Anal Chim Acta 2017; 985:91-100. [DOI: 10.1016/j.aca.2017.07.006] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2017] [Revised: 06/28/2017] [Accepted: 07/01/2017] [Indexed: 12/16/2022]
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8
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Gaspar DP, Gaspar MM, Eleutério CV, Grenha A, Blanco M, Gonçalves LMD, Taboada P, Almeida AJ, Remuñán-López C. Microencapsulated Solid Lipid Nanoparticles as a Hybrid Platform for Pulmonary Antibiotic Delivery. Mol Pharm 2017; 14:2977-2990. [PMID: 28809501 DOI: 10.1021/acs.molpharmaceut.7b00169] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Solid lipid nanoparticles (SLN) containing rifabutin (RFB), with pulmonary administration purposes, were developed through a technique that avoids the use of organic solvents or sonication. To facilitate their pulmonary delivery, the RFB-loaded SLN were included in microspheres of appropriate size using suitable excipients (mannitol and trehalose) through a spray-drying technique. Confocal analysis microscopy showed that microspheres are spherical and that SLN are efficiently microencapsulated and homogeneously distributed throughout the microsphere matrices. The aerodynamic diameters observed an optimal distribution for reaching the alveolar region. The dry powder's performance during aerosolization and the in vitro drug deposition were tested using a twin-impinger approach, which confirmed that the microspheres can reach the deep lung. Isothermal titration calorimetry revealed that SLN have higher affinity for mannitol than for trehalose. Upon microsphere dissolution in aqueous media, SLN were readily recovered, maintaining their physicochemical properties. When these dry powders reach the deep lung, microspheres are expected to readily dissolve, delivering the SLN which, in turn, will release RFB. The in vivo biodistribution of microencapsulated RFB-SLN demonstrated that the antibiotic achieved the tested organs 15 and 30 min post pulmonary administration. Their antimycobacterial activity was also evaluated in a murine model of infection with a Mycobacterium tuberculosis strain H37Rv resulting in an enhancement of activity against M. tuberculosis infection compared to nontreated animals. These results suggest that RFB-SLN microencapsulation is a promising approach for the treatment of tuberculosis.
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Affiliation(s)
- Diana P Gaspar
- Research Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa , Av. Professor Gama Pinto, 1649-003 Lisbon, Portugal
| | - Maria Manuela Gaspar
- Research Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa , Av. Professor Gama Pinto, 1649-003 Lisbon, Portugal
| | - Carla V Eleutério
- Research Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa , Av. Professor Gama Pinto, 1649-003 Lisbon, Portugal
| | | | | | - Lídia M D Gonçalves
- Research Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa , Av. Professor Gama Pinto, 1649-003 Lisbon, Portugal
| | | | - António J Almeida
- Research Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa , Av. Professor Gama Pinto, 1649-003 Lisbon, Portugal
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9
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Wuttke A, Geyer A. Self-assembly of peptide boroxoles on cis
-dihydroxylated oligoamide templates in water. J Pept Sci 2017; 23:549-555. [DOI: 10.1002/psc.3007] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2017] [Revised: 03/28/2017] [Accepted: 03/28/2017] [Indexed: 01/14/2023]
Affiliation(s)
- André Wuttke
- Institute of Chemistry; Philipps-University Marburg; Hans-Meerwein-Straße 35032 Marburg Germany
| | - Armin Geyer
- Institute of Chemistry; Philipps-University Marburg; Hans-Meerwein-Straße 35032 Marburg Germany
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10
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Gunasekara RW, Zhao Y. A General Method for Selective Recognition of Monosaccharides and Oligosaccharides in Water. J Am Chem Soc 2017; 139:829-835. [PMID: 27983819 PMCID: PMC5243169 DOI: 10.1021/jacs.6b10773] [Citation(s) in RCA: 62] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Molecular recognition of carbohydrates plays vital roles in biology but has been difficult to achieve with synthetic receptors. Through covalent imprinting of carbohydrates in boroxole-functionalized cross-linked micelles, we prepared nanoparticle receptors for a wide variety of mono- and oligosaccharides. The boroxole functional monomer bound the sugar templates through cis-1,2-diol, cis-3,4-diol, and trans-4,6-diol. The protein-sized nanoparticles showed excellent selectivity for d-aldohexoses in water with submillimolar binding affinities and completely distinguished the three biologically important hexoses (glucose, mannose, and galactose). Glycosides with nonpolar aglycon showed stronger binding due to enhanced hydrophobic interactions. Oligosaccharides were distinguished on the basis of their monosaccharide building blocks, glycosidic linkages, chain length, as well as additional functional groups that could interact with the nanoparticles.
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Affiliation(s)
| | - Yan Zhao
- Department of Chemistry, Iowa State University, Ames, Iowa 50011-3111
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11
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Otremba T, Ravoo BJ. Linear and Cyclic Carbohydrate Receptors Based on Peptides Modified with Boronic Acids. ChemistrySelect 2016. [DOI: 10.1002/slct.201600567] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Tobias Otremba
- Organic Chemistry Institute; Westfälische Wilhelms-Universtät Münster; Corrensstrasse 40 48149 Münster Germany
| | - Bart Jan Ravoo
- Organic Chemistry Institute; Westfälische Wilhelms-Universtät Münster; Corrensstrasse 40 48149 Münster Germany
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12
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Falconer RJ. Applications of isothermal titration calorimetry - the research and technical developments from 2011 to 2015. J Mol Recognit 2016; 29:504-15. [PMID: 27221459 DOI: 10.1002/jmr.2550] [Citation(s) in RCA: 57] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2016] [Revised: 04/05/2016] [Accepted: 04/14/2016] [Indexed: 12/12/2022]
Abstract
Isothermal titration calorimetry is a widely used biophysical technique for studying the formation or dissociation of molecular complexes. Over the last 5 years, much work has been published on the interpretation of isothermal titration calorimetry (ITC) data for single binding and multiple binding sites. As over 80% of ITC papers are on macromolecules of biological origin, this interpretation is challenging. Some researchers have attempted to link the thermodynamics constants to events at the molecular level. This review highlights work carried out using binding sites characterized using x-ray crystallography techniques that allow speculation about individual bond formation and the displacement of individual water molecules during ligand binding and link these events to the thermodynamic constants for binding. The review also considers research conducted with synthetic binding partners where specific binding events like anion-π and π-π interactions were studied. The revival of assays that enable both thermodynamic and kinetic information to be collected from ITC data is highlighted. Lastly, published criticism of ITC research from a physical chemistry perspective is appraised and practical advice provided for researchers unfamiliar with thermodynamics and its interpretation. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Robert J Falconer
- Department of Chemical and Biological Engineering, ChELSI Institute, University of Sheffield, Sheffield, S1 3JD, UK.
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13
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Zhang P, Woen S, Wang T, Liau B, Zhao S, Chen C, Yang Y, Song Z, Wormald MR, Yu C, Rudd PM. Challenges of glycosylation analysis and control: an integrated approach to producing optimal and consistent therapeutic drugs. Drug Discov Today 2016; 21:740-65. [DOI: 10.1016/j.drudis.2016.01.006] [Citation(s) in RCA: 136] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2015] [Revised: 12/22/2015] [Accepted: 01/14/2016] [Indexed: 12/18/2022]
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14
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A carbohydrate-binding affinity ligand for the specific enrichment of glycoproteins. J Chromatogr A 2016; 1444:8-20. [DOI: 10.1016/j.chroma.2016.03.049] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2015] [Revised: 01/22/2016] [Accepted: 03/18/2016] [Indexed: 02/07/2023]
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15
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Vancoillie G, Hoogenboom R. Synthesis and polymerization of boronic acid containing monomers. Polym Chem 2016. [DOI: 10.1039/c6py00775a] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
This mini-review summarizes the most commonly used methods for the synthesis of phenylboronic acid-(co)polymers ranging from simple straightforward polymerization to complex post-polymerization modification.
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Affiliation(s)
- Gertjan Vancoillie
- Supramolecular Chemistry Group
- Department of Organic and Macromolecular Chemistry
- 9000 Ghent
- Belgium
| | - Richard Hoogenboom
- Supramolecular Chemistry Group
- Department of Organic and Macromolecular Chemistry
- 9000 Ghent
- Belgium
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16
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Rowe L, El Khoury G, Lowe CR. A benzoboroxole-based affinity ligand for glycoprotein purification at physiological pH. J Mol Recognit 2015; 29:232-8. [DOI: 10.1002/jmr.2524] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2015] [Revised: 11/01/2015] [Accepted: 11/02/2015] [Indexed: 01/14/2023]
Affiliation(s)
- Laura Rowe
- Institute of Biotechnology, Department of Chemical Engineering and Biotechnology; University of Cambridge; Cambridge CB2 1QT UK
- Department of Chemistry; Valparaiso University; Valparaiso IN 46383 USA
| | - Graziella El Khoury
- Institute of Biotechnology, Department of Chemical Engineering and Biotechnology; University of Cambridge; Cambridge CB2 1QT UK
| | - Christopher R. Lowe
- Institute of Biotechnology, Department of Chemical Engineering and Biotechnology; University of Cambridge; Cambridge CB2 1QT UK
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17
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Melicher MS, Walker AS, Shen J, Miller SJ, Schepartz A. Improved Carbohydrate Recognition in Water with an Electrostatically Enhanced β-Peptide Bundle. Org Lett 2015; 17:4718-21. [DOI: 10.1021/acs.orglett.5b02187] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Michael S. Melicher
- Department of Chemistry and ‡Department of Molecular, Cellular, and Developmental
Biology, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Allison S. Walker
- Department of Chemistry and ‡Department of Molecular, Cellular, and Developmental
Biology, Yale University, New Haven, Connecticut 06520-8107, United States
| | - John Shen
- Department of Chemistry and ‡Department of Molecular, Cellular, and Developmental
Biology, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Scott J. Miller
- Department of Chemistry and ‡Department of Molecular, Cellular, and Developmental
Biology, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Alanna Schepartz
- Department of Chemistry and ‡Department of Molecular, Cellular, and Developmental
Biology, Yale University, New Haven, Connecticut 06520-8107, United States
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18
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Adamczyk-Woźniak A, Borys KM, Sporzyński A. Recent Developments in the Chemistry and Biological Applications of Benzoxaboroles. Chem Rev 2015; 115:5224-47. [DOI: 10.1021/cr500642d] [Citation(s) in RCA: 154] [Impact Index Per Article: 17.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
| | - Krzysztof M. Borys
- Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664 Warsaw, Poland
| | - Andrzej Sporzyński
- Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664 Warsaw, Poland
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19
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Liu Z, Chao D, Li Y, Ting R, Oh J, Perrin DM. From Minutes to Years: Predicting Organotrifluoroborate Solvolysis Rates. Chemistry 2015; 21:3924-8. [DOI: 10.1002/chem.201405829] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2014] [Indexed: 01/22/2023]
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20
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Jiang HP, Qi CB, Chu JM, Yuan BF, Feng YQ. Profiling of cis-diol-containing nucleosides and ribosylated metabolites by boronate-affinity organic-silica hybrid monolithic capillary liquid chromatography/mass spectrometry. Sci Rep 2015; 5:7785. [PMID: 25585609 PMCID: PMC4293604 DOI: 10.1038/srep07785] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2014] [Accepted: 12/15/2014] [Indexed: 12/18/2022] Open
Abstract
RNA contains a large number of modified nucleosides. In the metabolic re-exchange of RNA, modified nucleosides cannot be recycled and are thus excreted from cells into biological fluids. Determination of endogenous modified nucleosides in biological fluids may serve as non-invasive cancers diagnostic methods. Here we prepared boronate-affinity organic-silica hybrid capillary monolithic column (BOHCMC) that exhibited excellent selectivity toward the cis-diol-containing compounds. We then used the prepared BOHCMC as the on-line solid-phase microextraction (SPME) column and developed an on-line SPME-LC-MS/MS method to comprehensively profile cis-diol-containing nucleosides and ribosylated metabolites in human urine. Forty-five cis-diol-containing nucleosides and ribosylated metabolites were successfully identified in human urine. And five ribose conjugates, for the first time, were identified existence in human urine in the current study. Furthermore, the relative quantification suggested 4 cis-diol-containing compounds (5′-deoxy-5′-methylthioadensine, N4-acetylcytidine, 1-ribosyl-N-propionylhistamine and N2,N2,7-trimethylguanosine) increased more than 1.5 folds in all the 3 types of examined cancers (lung cancer, colorectal cancer, and nasopharyngeal cancer) compared to healthy controls. The on-line SPME-LC-MS/MS method demonstrates a promising method for the comprehensive profiling of cis-diol-containing ribose conjugates in human urines, which provides an efficient strategy for the identification and discovery of biomarkers and may be used for the screening of cancers.
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Affiliation(s)
- Han-Peng Jiang
- Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry, Wuhan University, Wuhan 430072, China
| | - Chu-Bo Qi
- 1] Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry, Wuhan University, Wuhan 430072, China [2] Department of Pathology, Hubei Cancer Hospital, Wuhan 430079, China
| | - Jie-Mei Chu
- Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry, Wuhan University, Wuhan 430072, China
| | - Bi-Feng Yuan
- Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry, Wuhan University, Wuhan 430072, China
| | - Yu-Qi Feng
- Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry, Wuhan University, Wuhan 430072, China
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Li Q, Liu Z. Preparation and characterization of fluorophenylboronic acid-functionalized affinity monolithic columns for the selective enrichment of cis-diol-containing biomolecules. Methods Mol Biol 2015; 1286:159-169. [PMID: 25749953 DOI: 10.1007/978-1-4939-2447-9_13] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Boronate affinity monolithic columns have been developed into an important means for the selective recognition and capture of cis-diol-containing biomolecules, such as glycoproteins, nucleosides and saccharides. The ligands of boronic acids are playing an important role in boronate affinity monolithic columns. Although several boronate affinity monoliths with high affinity toward cis-diol-containing biomolecules have been reported, only few publications are focused on their detailed procedures for preparation and characterization. This chapter describes in detail the preparation and characterization of a boronate affinity monolithic column applying 2,4-difluoro-3-formyl-phenylboronic acid (DFFPBA) as a ligand. The DFFPBA-functionalized monolithic column not only exhibited an ultrahigh boronate affinity toward cis-diol-containing biomolecules, but also showed great potential for the selective enrichment of cis-diol-containing biomolecules in real samples.
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Affiliation(s)
- Qianjin Li
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Hankou Road 22, Nanjing, 210093, China
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Lü C, Liu Z. Characterization of the binding strengths between boronic acids and cis-diol-containing biomolecules by affinity capillary electrophoresis. Methods Mol Biol 2015; 1286:297-307. [PMID: 25749963 DOI: 10.1007/978-1-4939-2447-9_23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The affinity of boronic acids toward cis-diol-containing biomolecules has found wide applications in many fields, such as sensing, separation, drug delivery, and functional materials. A sound understanding of the binding interactions will greatly facilitate exquisite applications of this chemistry. Traditional techniques are associated with some apparent drawbacks, so they are only applicable to a limited range of boronic acids and cis-diol-containing biomolecules. This chapter describes an affinity capillary electrophoresis (ACE) method for the characterization of the binding strengths between boronic acids and cis-diol-containing biomolecules. As compared with existing approaches, such as (11)B NMR, the ACE method exhibits several significant advantages: (1) possibility of simultaneous study of multiple interactions, (2) low requirement on the purity of the binding species, (3) widely applicable to almost all types of cis-diol-containing compounds and boronic acids, and (4) high accuracy and precision.
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Affiliation(s)
- Chenchen Lü
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Hankou Road 22, Nanjing, 210093, China
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Lozada J, Liu Z, Perrin DM. Base-promoted protodeboronation of 2,6-disubstituted arylboronic acids. J Org Chem 2014; 79:5365-8. [PMID: 24826787 DOI: 10.1021/jo500734z] [Citation(s) in RCA: 82] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Facile based promoted deboronation of electron-deficient arylboronate esters was observed for arylboronates containing two ortho electron-withdrawing group (EWG) substituents. Among 30 representative boronates, only the diortho-substituted species underwent facile C-B fission in aqueous basic conditions (200 mM hydroxide). These results provide fundamental insight into deboronative mechanisms with implications for cross-coupling reactions, regioselective deuteration/tritiation for isotopic labeling, and the design of new (18)F-trifluoroborate radioprosthetics.
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Affiliation(s)
- Jerome Lozada
- Department of Chemistry, University of British Columbia , Vancouver BC, Canada
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Liu CT, Tomsho JW, Benkovic SJ. The unique chemistry of benzoxaboroles: current and emerging applications in biotechnology and therapeutic treatments. Bioorg Med Chem 2014; 22:4462-73. [PMID: 24864040 DOI: 10.1016/j.bmc.2014.04.065] [Citation(s) in RCA: 90] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2014] [Revised: 04/21/2014] [Accepted: 04/30/2014] [Indexed: 12/25/2022]
Abstract
Benzoxaboroles have garnered much attention in recent years due to their diverse applications in bio-sensing technology, material science, and therapeutic intervention. Part of the reason arises from the benzoxaboroles' unique chemical properties, especially in comparison to their acyclic boronic acid counterparts. Furthermore, the low bio-toxicity combined with the high target specificity associated with benzoxaboroles make them very attractive as therapeutic agents. Herein, we provide an updated summary on the current knowledge of the fundamental chemical reactivity of benzoxaboroles, followed by highlighting their major applications reported to date.
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Affiliation(s)
- C Tony Liu
- Department of Chemistry, Pennsylvania State University, University Park, PA 16802, United States
| | - John W Tomsho
- Department of Chemistry & Biochemistry, University of the Sciences, 600 S. 43rd Street, Philadelphia, PA 19104-4495, United States.
| | - Stephen J Benkovic
- Department of Chemistry, Pennsylvania State University, University Park, PA 16802, United States.
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Zhang Y, Ma W, Li D, Yu M, Guo J, Wang C. Benzoboroxole-functionalized magnetic core/shell microspheres for highly specific enrichment of glycoproteins under physiological conditions. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2014; 10:1379-1386. [PMID: 24307573 DOI: 10.1002/smll.201302841] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2013] [Indexed: 06/02/2023]
Abstract
Efficient enrichment of specific glycoproteins from complex biological samples is of great importance towards the discovery of disease biomarkers in biological systems. Recently, phenylboronic acid-based functional materials have been widely used for enrichment of glycoproteins. However, such enrichment was mainly carried out under alkaline conditions, which is different to the status of glycoproteins in neutral physiological conditions and may cause some unpredictable degradation. In this study, on-demand neutral enrichment of glycoproteins from crude biological samples is accomplished by utilizing the reversible interaction between the cis-diols of glycoproteins and benzoboroxole-functionalized magnetic composite microspheres (Fe3O4/PAA-AOPB). The Fe3O4/PAA-AOPB composite microspheres are deliberately designed and constructed with a high-magnetic-response magnetic supraparticle (MSP) core and a crosslinked poly(acrylic acid) (PAA) shell anchoring abundant benzoboroxole functional groups on the surface. These nanocomposites possessed many merits, such as large enrichment capacity (93.9 mg/g, protein/beads), low non-specific adsorption, quick enrichment process (10 min) and magnetic separation speed (20 s), and high recovery efficiency. Furthermore, the as-prepared Fe3O4/PAA-AOPB microspheres display high selectivity to glycoproteins even in the E. coli lysate or fetal bovine serum, showing great potential in the identify of low-abundance glycoproteins as biomarkers in real complex biological systems for clinical diagnoses.
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Affiliation(s)
- Yuting Zhang
- State Key Laboratory of Molecular, Engineering of Polymers, Department of Macromolecular Science and Laboratory of Advanced Materials, Fudan University, Shanghai, 200433, People's Republic of China
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VanVeller B, Aronoff MR, Raines RT. A Divalent Protecting Group for Benzoxaboroles. RSC Adv 2013; 44:21331-21334. [PMID: 24505552 PMCID: PMC3910298 DOI: 10.1039/c3ra44385j] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
1-Dimethylamino-8-methylaminonaphthalene is put forth as a protecting group for benzoxaboroles. The ensuing complex is fluorescent, charge-neutral, highly stable under basic conditions, stable to anhydrous acid, and readily cleavable in aqueous acid to return the free benzoxaborole.
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Affiliation(s)
- Brett VanVeller
- Department of Biochemistry, University of Wisconsin–Madison, 433 Babcock Drive, Madison, WI 53706-1544, USA. Fax: +1 608 890 2583; Tel: +1 608 262 8588
| | - Matthew R. Aronoff
- Department of Chemistry, University of Wisconsin–Madison, 1101 University Avenue, Madison, WI 53706-1322, USA
| | - Ronald T. Raines
- Department of Chemistry, University of Wisconsin–Madison, 1101 University Avenue, Madison, WI 53706-1322, USA
- Department of Biochemistry, University of Wisconsin–Madison, 433 Babcock Drive, Madison, WI 53706-1544, USA. Fax: +1 608 890 2583; Tel: +1 608 262 8588
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Claes D, Holzapfel M, Clausen N, Maison W. Synthesis of Adamantane-Based Trimeric Benzoboroxoles. European J Org Chem 2013. [DOI: 10.1002/ejoc.201300769] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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28
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Preparation and characterization of fluorophenylboronic acid-functionalized monolithic columns for high affinity capture of cis-diol containing compounds. J Chromatogr A 2013; 1305:123-30. [DOI: 10.1016/j.chroma.2013.07.007] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2013] [Revised: 06/30/2013] [Accepted: 07/01/2013] [Indexed: 02/01/2023]
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29
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Synthesis and Biological Evaluation of Novel Benzoxaboroles as Potential Antimicrobial and Anticancer Agents. J Heterocycl Chem 2013. [DOI: 10.1002/jhet.1777] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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30
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Lü C, Li H, Wang H, Liu Z. Probing the Interactions between Boronic Acids and cis-Diol-Containing Biomolecules by Affinity Capillary Electrophoresis. Anal Chem 2013; 85:2361-9. [DOI: 10.1021/ac3033917] [Citation(s) in RCA: 119] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Chenchen Lü
- State Key Laboratory of Analytical Chemistry
for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210093,
People’s Republic of China
| | - Hengye Li
- State Key Laboratory of Analytical Chemistry
for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210093,
People’s Republic of China
| | - Heye Wang
- State Key Laboratory of Analytical Chemistry
for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210093,
People’s Republic of China
| | - Zhen Liu
- State Key Laboratory of Analytical Chemistry
for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210093,
People’s Republic of China
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Bier FF, Schumacher S. Integration in Bioanalysis: Technologies for Point-of-Care Testing. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2013; 133:1-14. [DOI: 10.1007/10_2012_164] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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32
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Li H, Wang H, Liu Y, Liu Z. A benzoboroxole-functionalized monolithic column for the selective enrichment and separation of cis-diol containing biomolecules. Chem Commun (Camb) 2012; 48:4115-7. [DOI: 10.1039/c2cc30230f] [Citation(s) in RCA: 126] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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