1
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Hansen K. The stabilization of cyanonaphthalene by fast radiative cooling. Nat Commun 2024; 15:8442. [PMID: 39353934 PMCID: PMC11445457 DOI: 10.1038/s41467-024-52695-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Accepted: 09/16/2024] [Indexed: 10/03/2024] Open
Affiliation(s)
- K Hansen
- Center for Joint Quantum Studies and Department of Physics, School of Science, Tianjin University, Tianjin, 300072, China.
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2
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Goettl SJ, Yang Z, He C, Somani A, Portela-Gonzalez A, Sander W, Mebel AM, Kaiser RI. Exploring the chemical dynamics of phenanthrene (C 14H 10) formation via the bimolecular gas-phase reaction of the phenylethynyl radical (C 6H 5CC) with benzene (C 6H 6). Faraday Discuss 2024; 251:509-522. [PMID: 38766758 DOI: 10.1039/d3fd00159h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/22/2024]
Abstract
The exploration of the fundamental formation mechanisms of polycyclic aromatic hydrocarbons (PAHs) is crucial for the understanding of molecular mass growth processes leading to two- and three-dimensional carbonaceous nanostructures (nanosheets, graphenes, nanotubes, buckyballs) in extraterrestrial environments (circumstellar envelopes, planetary nebulae, molecular clouds) and combustion systems. While key studies have been conducted exploiting traditional, high-temperature mechanisms such as the hydrogen abstraction-acetylene addition (HACA) and phenyl addition-dehydrocyclization (PAC) pathways, the complexity of extreme environments highlights the necessity of investigating chemically diverse mass growth reaction mechanisms leading to PAHs. Employing the crossed molecular beams technique coupled with electronic structure calculations, we report on the gas-phase synthesis of phenanthrene (C14H10)-a three-ring, 14π benzenoid PAH-via a phenylethynyl addition-cyclization-aromatization mechanism, featuring bimolecular reactions of the phenylethynyl radical (C6H5CC, X2A1) with benzene (C6H6) under single collision conditions. The dynamics involve a phenylethynyl radical addition to benzene without entrance barrier leading eventually to phenanthrene via indirect scattering dynamics through C14H11 intermediates. The barrierless nature of reaction allows rapid access to phenanthrene in low-temperature environments such as cold molecular clouds which can reach temperatures as low as 10 K. This mechanism constitutes a unique, low-temperature framework for the formation of PAHs as building blocks in molecular mass growth processes to carbonaceous nanostructures in extraterrestrial environments thus affording critical insight into the low-temperature hydrocarbon chemistry in our universe.
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Affiliation(s)
- Shane J Goettl
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA.
| | - Zhenghai Yang
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA.
| | - Chao He
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA.
| | - Ankit Somani
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, 44801 Bochum, Germany.
| | | | - Wolfram Sander
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, 44801 Bochum, Germany.
| | - Alexander M Mebel
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, USA.
| | - Ralf I Kaiser
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA.
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3
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Goettl SJ, He C, Yang Z, Kaiser RI, Somani A, Portela-Gonzalez A, Sander W, Sun BJ, Fatimah S, Kadam KP, Chang AHH. Unconventional gas-phase synthesis of biphenyl and its atropisomeric methyl-substituted derivatives. Phys Chem Chem Phys 2024; 26:18321-18332. [PMID: 38912536 DOI: 10.1039/d4cp00765d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/25/2024]
Abstract
The biphenyl molecule (C12H10) acts as a fundamental molecular backbone in the stereoselective synthesis of organic materials due to its inherent twist angle causing atropisomerism in substituted derivatives and in molecular mass growth processes in circumstellar environments and combustion systems. Here, we reveal an unconventional low-temperature phenylethynyl addition-cyclization-aromatization mechanism for the gas-phase preparation of biphenyl (C12H10) along with ortho-, meta-, and para-substituted methylbiphenyl (C13H12) derivatives through crossed molecular beams and computational studies providing compelling evidence on their formation via bimolecular gas-phase reactions of phenylethynyl radicals (C6H5CC, X2A1) with 1,3-butadiene-d6 (C4D6), isoprene (CH2C(CH3)CHCH2), and 1,3-pentadiene (CH2CHCHCHCH3). The dynamics involve de-facto barrierless phenylethynyl radical additions via submerged barriers followed by facile cyclization and hydrogen shift prior to hydrogen atom emission and aromatization to racemic mixtures (ortho, meta) of biphenyls in overall exoergic reactions. These findings not only challenge our current perception of biphenyls as high temperature markers in combustion systems and astrophysical environments, but also identify biphenyls as fundamental building blocks of complex polycyclic aromatic hydrocarbons (PAHs) such as coronene (C24H12) eventually leading to carbonaceous nanoparticles (soot, grains) in combustion systems and in deep space thus affording critical insight into the low-temperature hydrocarbon chemistry in our universe.
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Affiliation(s)
- Shane J Goettl
- Department of Chemistry, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.
| | - Chao He
- Department of Chemistry, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.
| | - Zhenghai Yang
- Department of Chemistry, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.
| | - Ralf I Kaiser
- Department of Chemistry, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.
| | - Ankit Somani
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, Bochum 44801, Germany.
| | | | - Wolfram Sander
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, Bochum 44801, Germany.
| | - Bing-Jian Sun
- Department of Chemistry, National Dong Hwa University, Shoufeng, Hualien 974, Taiwan.
| | - Siti Fatimah
- Department of Chemistry, National Dong Hwa University, Shoufeng, Hualien 974, Taiwan.
| | - Komal P Kadam
- Department of Chemistry, National Dong Hwa University, Shoufeng, Hualien 974, Taiwan.
| | - Agnes H H Chang
- Department of Chemistry, National Dong Hwa University, Shoufeng, Hualien 974, Taiwan.
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4
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Salbaing T, Comte D, Lavy L, Lissillour H, Ospina LP, Bertier P, Feketeová L, Calvo F, Farizon B, Farizon M, Märk T. Water molecule elimination from the protonated methanol dimer ion-An example of a size-selective intracluster reaction. J Chem Phys 2024; 160:094301. [PMID: 38436443 DOI: 10.1063/5.0190182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Accepted: 02/12/2024] [Indexed: 03/05/2024] Open
Abstract
The abundance of extraterrestrial methanol makes the reaction between methanol molecules in a molecular cluster a possible key step in the search for mechanisms for the formation of more complex molecules under the conditions of the interstellar medium as well as circumstellar and planetary atmospheres. The reaction leading to the formation of the dimethyl ether ion from a methanol molecule interacting with a protonated methanol ion via the elimination of a water molecule is a basic mechanism for the formation of complex organic molecules. Here, we experimentally examine such reactions in the gas phase, analyzing the production and reactivity of protonated cluster ions formed by the ionization of a supersonic jet of methanol. Focusing especially on the post-collisional relaxation of the protonated methanol dimer and trimer ions after high-energy single collisions, the results indicate a strong size selectivity favoring the occurrence of this reaction only in the dimer ion. To elucidate this behavior, the velocity distribution of the eliminated water molecule was measured using an event-by-event coincidence analysis. These results are interpreted using quantum chemical calculations of the dissociation pathways. It turns out that in the dimer case, two transition states are able to contribute to this intracluster reaction. In the trimer case, methanol evaporation appears as the most energetically favorable relaxation pathway.
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Affiliation(s)
- Thibaud Salbaing
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Denis Comte
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
- Institut für Ionenphysik und Angewandte Physik, Leopold Franzens Universität, 6020 Innsbruck, Austria
| | - Léo Lavy
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Hector Lissillour
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Laura Parrado Ospina
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Paul Bertier
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Linda Feketeová
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Florent Calvo
- Université Grenoble Alpes, CNRS, LIPhy, 38000 Grenoble, France
| | - Bernadette Farizon
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Michel Farizon
- Université Claude Bernard Lyon 1, IP2I Lyon, UMR 5822, CNRS/IN2P3, F-69622 Villeurbanne, France
| | - Tilmann Märk
- Institut für Ionenphysik und Angewandte Physik, Leopold Franzens Universität, 6020 Innsbruck, Austria
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5
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Mathew A, Giskes F, Lekkas A, Greisch JF, Eijkel GB, Anthony IGM, Fort K, Heck AJR, Papanastasiou D, Makarov AA, Ellis SR, Heeren RMA. An Orbitrap/Time-of-Flight Mass Spectrometer for Photofragment Ion Imaging and High-Resolution Mass Analysis of Native Macromolecular Assemblies. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2023. [PMID: 37319176 DOI: 10.1021/jasms.3c00053] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
We discuss the design, development, and evaluation of an Orbitrap/time-of-flight (TOF) mass spectrometry (MS)-based instrument with integrated UV photodissociation (UVPD) and time/mass-to-charge ratio (m/z)-resolved imaging for the comprehensive study of the higher-order molecular structure of macromolecular assemblies (MMAs). A bespoke TOF analyzer has been coupled to the higher-energy collisional dissociation cell of an ultrahigh mass range hybrid quadrupole-Orbitrap MS. A 193 nm excimer laser was employed to photofragment MMA ions. A combination of microchannel plates (MCPs)-Timepix (TPX) quad and MCPs-phosphor screen-TPX3CAM assemblies have been used as axial and orthogonal imaging detectors, respectively. The instrument can operate in four different modes, where the UVPD-generated fragment ions from the native MMA ions can be measured with high-mass resolution or imaged in a mass-resolved manner to reveal the relative positions of the UVPD fragments postdissociation. This information is intended to be utilized for retrieving higher-order molecular structural details that include the conformation, subunit stoichiometry, and molecular interactions as well as to understand the dissociation dynamics of the MMAs in the gas phase.
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Affiliation(s)
- Anjusha Mathew
- Maastricht MultiModal Molecular Imaging (M4i) Institute, Division of Imaging Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
| | - Frans Giskes
- Maastricht MultiModal Molecular Imaging (M4i) Institute, Division of Imaging Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
| | - Alexandros Lekkas
- Fasmatech Science and Technology, Demokritos NCSR, 15310 Agia Paraskevi, Athens, Greece
| | - Jean-François Greisch
- Biomolecular Mass Spectrometry and Proteomics, Bijvoet Centre for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands
- Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands
| | - Gert B Eijkel
- Maastricht MultiModal Molecular Imaging (M4i) Institute, Division of Imaging Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
| | - Ian G M Anthony
- Maastricht MultiModal Molecular Imaging (M4i) Institute, Division of Imaging Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
| | - Kyle Fort
- Thermo Fisher Scientific (Bremen) GmbH, 28199 Bremen, Germany
| | - Albert J R Heck
- Biomolecular Mass Spectrometry and Proteomics, Bijvoet Centre for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands
- Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands
| | | | - Alexander A Makarov
- Biomolecular Mass Spectrometry and Proteomics, Bijvoet Centre for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands
- Thermo Fisher Scientific (Bremen) GmbH, 28199 Bremen, Germany
| | - Shane R Ellis
- Maastricht MultiModal Molecular Imaging (M4i) Institute, Division of Imaging Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Ron M A Heeren
- Maastricht MultiModal Molecular Imaging (M4i) Institute, Division of Imaging Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
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6
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Hydrogen migration in inner-shell ionized halogenated cyclic hydrocarbons. Sci Rep 2023; 13:2107. [PMID: 36747068 PMCID: PMC9902455 DOI: 10.1038/s41598-023-28694-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Accepted: 01/23/2023] [Indexed: 02/08/2023] Open
Abstract
We have studied the fragmentation of the brominated cyclic hydrocarbons bromocyclo-propane, bromocyclo-butane, and bromocyclo-pentane upon Br(3d) and C(1s) inner-shell ionization using coincidence ion momentum imaging. We observe a substantial yield of CH3+ fragments, whose formation requires intramolecular hydrogen (or proton) migration, that increases with molecular size, which contrasts with prior observations of hydrogen migration in linear hydrocarbon molecules. Furthermore, by inspecting the fragment ion momentum correlations of three-body fragmentation channels, we conclude that CHx+ fragments (with x = 0, …, 3) with an increasing number of hydrogens are more likely to be produced via sequential fragmentation pathways. Overall trends in the molecular-size-dependence of the experimentally observed kinetic energy releases and fragment kinetic energies are explained with the help of classical Coulomb explosion simulations.
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7
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Mathew A, Keelor JD, Eijkel GB, Anthony IGM, Long J, Prangsma J, Heeren RMA, Ellis SR. Time-Resolved Imaging of High Mass Proteins and Metastable Fragments Using Matrix-Assisted Laser Desorption/Ionization, Axial Time-of-Flight Mass Spectrometry, and TPX3CAM. Anal Chem 2022; 95:1470-1479. [PMID: 36574608 PMCID: PMC9850352 DOI: 10.1021/acs.analchem.2c04480] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The Timepix (TPX) is a position- and time-sensitive pixelated charge detector that can be coupled with time-of-flight mass spectrometry (TOF MS) in combination with microchannel plates (MCPs) for the spatially and temporally resolved detection of biomolecules. Earlier generation TPX detectors used in previous studies were limited by a moderate time resolution (at best 10 ns) and single-stop detection for each pixel that hampered the detection of ions with high mass-to-charge (m/z) values at high pixel occupancies. In this study, we have coupled an MCP-phosphor screen-TPX3CAM detection assembly that contains a silicon-coated TPX3 chip to a matrix-assisted laser desorption/ionization (MALDI)-axial TOF MS. A time resolution of 1.5625 ns, per-pixel multihit functionality, simultaneous measurement of TOF and time-over-threshold (TOT) values, and kHz readout rates of the TPX3 extended the m/z detection range of the TPX detector family. The detection of singly charged intact Immunoglobulin M ions of m/z value approaching 1 × 106 Da has been demonstrated. We also discuss the utilization of additional information on impact coordinates and TOT provided by the TPX3 compared to conventional MS detectors for the enhancement of the quality of the mass spectrum in terms of signal-to-noise (S/N) ratio. We show how the reduced dead time and event-based readout in TPX3 compared to the TPX improves the sensitivity of high m/z detection in both low and high mass measurements (m/z range: 757-970,000 Da). We further exploit the imaging capabilities of the TPX3 detector for the spatial and temporal separation of neutral fragments generated by metastable decay at different locations along the field-free flight region by simultaneous application of deflection and retarding fields.
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Affiliation(s)
- Anjusha Mathew
- Maastricht
MultiModal Molecular Imaging (M4i) Institute, Division of Imaging
Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
| | - Joel D. Keelor
- Amsterdam
Scientific Instruments (ASI), Science Park 106, 1098 XG Amsterdam, The Netherlands
| | - Gert B. Eijkel
- Maastricht
MultiModal Molecular Imaging (M4i) Institute, Division of Imaging
Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
| | - Ian G. M. Anthony
- Maastricht
MultiModal Molecular Imaging (M4i) Institute, Division of Imaging
Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands
| | - Jingming Long
- Amsterdam
Scientific Instruments (ASI), Science Park 106, 1098 XG Amsterdam, The Netherlands
| | - Jord Prangsma
- Amsterdam
Scientific Instruments (ASI), Science Park 106, 1098 XG Amsterdam, The Netherlands
| | - Ron M. A. Heeren
- Maastricht
MultiModal Molecular Imaging (M4i) Institute, Division of Imaging
Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands,
| | - Shane R. Ellis
- Maastricht
MultiModal Molecular Imaging (M4i) Institute, Division of Imaging
Mass Spectrometry (IMS), Maastricht University, 6229 ER Maastricht, The Netherlands,Molecular
Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, NSW 2522, Wollongong, Australia,
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8
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Bonfim VSA, Prazeres I, Morcelle V, Marinho RRT, Arruda MS, Mendes LAV, Ribeiro LC, Santos MJ, Medina A, Santos ACF. 1,1,1,2-tetrafluoroethane photofragmentation: a translational kinetic energy release analysis in the EUV and X-ray energies range. Mol Phys 2022. [DOI: 10.1080/00268976.2022.2100836] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Víctor S. A. Bonfim
- Instituto de Física, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
| | - Italo Prazeres
- Instituto de Física, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
| | - Viviane Morcelle
- Instituto de Física, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
- Departamento de Física, Universidade Federal Rural do Rio de Janeiro, Seropédica, RJ, Brazil
| | - Ricardo R. T. Marinho
- Instituto de Física, Universidade de Brasília, Brasília, DF, Brazil
- Instituto de Física, Universidade Federal da Bahia, Salvador, BA, Brazil
| | - Manuela S. Arruda
- Instituto de Física, Universidade Federal da Bahia, Salvador, BA, Brazil
| | - Luiz A. V. Mendes
- Departamento de Ciências Exatas, Biológicas e da Terras, Universidade Federal Fluminense, Santo Antônio de Pádua, RJ, Brazil
| | | | - Mabele J. Santos
- Instituto Federal de Educação, Ciência e Tecnologia do Sertão de Pernambuco, Ouricuri, PE, Brazil
| | - Aline Medina
- Instituto de Física, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
| | - Antônio C. F. Santos
- Instituto de Física, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
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9
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Rodríguez Pirani LS, Cánneva A, Geronés M, Della Védova CO, Romano RM, Cavasso-Filho R, Erben MF. Formation of HCO+ and HCS+ Ions in the Photodissociation of CH3OC(S)SCH3 under VUV Synchrotron Radiation. J Phys Chem A 2019; 123:6674-6682. [DOI: 10.1021/acs.jpca.9b03670] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Lucas S. Rodríguez Pirani
- CEQUINOR (UNLP—CONICET, CCT La Plata, associated with CIC PBA). Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de la Plata. Boulevard 120 e/ 60 y 64 No 1465 CP 1900, La Plata, República Argentina
| | - Antonela Cánneva
- CEQUINOR (UNLP—CONICET, CCT La Plata, associated with CIC PBA). Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de la Plata. Boulevard 120 e/ 60 y 64 No 1465 CP 1900, La Plata, República Argentina
| | - Mariana Geronés
- CEQUINOR (UNLP—CONICET, CCT La Plata, associated with CIC PBA). Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de la Plata. Boulevard 120 e/ 60 y 64 No 1465 CP 1900, La Plata, República Argentina
| | - Carlos O. Della Védova
- CEQUINOR (UNLP—CONICET, CCT La Plata, associated with CIC PBA). Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de la Plata. Boulevard 120 e/ 60 y 64 No 1465 CP 1900, La Plata, República Argentina
| | - Rosana M. Romano
- CEQUINOR (UNLP—CONICET, CCT La Plata, associated with CIC PBA). Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de la Plata. Boulevard 120 e/ 60 y 64 No 1465 CP 1900, La Plata, República Argentina
| | - Reinaldo Cavasso-Filho
- Universidade Federal do ABC, Rua Catequese, 242, CEP: 09090-400, Santo André, São Paulo, Brazil
| | - Mauricio F. Erben
- CEQUINOR (UNLP—CONICET, CCT La Plata, associated with CIC PBA). Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de la Plata. Boulevard 120 e/ 60 y 64 No 1465 CP 1900, La Plata, República Argentina
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10
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Chen FQ, Kono N, Suzuki R, Furukawa T, Tanuma H, Ferrari P, Azuma T, Matsumoto J, Shiromaru H, Zhaunerchyk V, Hansen K. Radiative cooling of cationic carbon clusters, C N+, N = 8, 10, 13-16. Phys Chem Chem Phys 2019; 21:1587-1596. [PMID: 30620033 DOI: 10.1039/c8cp06368k] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The radiative cooling of highly excited carbon cluster cations of sizes N = 8, 10, 13-16 has been studied in an electrostatic storage ring. The cooling rate constants vary with cluster size from a maximum at N = 8 of 2.6 × 104 s-1 and a minimum at N = 13 of 4.4 × 103 s-1. The high rates indicate that photon emission takes place from electronically excited ions, providing a strong stabilizing cooling of the molecules.
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Affiliation(s)
- F-Q Chen
- School of Materials Science and Engineering, Tianjin University, Tianjin 300350, China
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11
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Azargun M, Meister PJ, Gauld JW, Fridgen TD. The K2(9-ethylguanine)122+ quadruplex is more stable to unimolecular dissociation than the K(9-ethylguanine)8+ quadruplex in the gas phase: a BIRD, energy resolved SORI-CID, IRMPD spectroscopic, and computational study. Phys Chem Chem Phys 2019; 21:15319-15326. [DOI: 10.1039/c9cp01651a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A combination of experimental trapped-ion mass spectrometric studies and computational chemistry has been used to assess the intrinsic properties of the potassiated 9-ethylguanine (9eG) self-assembled quadruplex, K2(9eG)122+, in the gas phase.
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Affiliation(s)
- Mohammad Azargun
- Department of Chemistry
- Memorial University of Newfoundland
- St. John's
- Canada
| | - Paul J. Meister
- Department of Chemistry and Biochemistry
- University of Windsor
- Windsor
- Canada
| | - James W. Gauld
- Department of Chemistry and Biochemistry
- University of Windsor
- Windsor
- Canada
| | - Travis D. Fridgen
- Department of Chemistry
- Memorial University of Newfoundland
- St. John's
- Canada
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12
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Gutierrez MG, Theis Z, Lewis TWR, Bellert DJ. A molecular beam apparatus for performing single photon initiated dissociative rearrangement reactions (SPIDRR) with transition metal cation bound organic clusters. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2018; 89:074101. [PMID: 30068115 DOI: 10.1063/1.5024939] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The study of gas-phase ion-molecule reactions has been influential in the investigation of transition metal mediated bond activation and catalysis. We have furthered this field by developing a new technique capable of measuring the microcanonical kinetics for reactions between transition metal cations and neutral organic molecules. This novel method has been designated as single photon initiated dissociative rearrangement reaction (SPIDRR) technique and provides a nearly direct measurement of microcanonical reaction rate constants. For this reason, SPIDRR offers unique insight into reaction mechanisms and dynamics by assessing the energy dependence of the microcanonical rate constant, as well as measuring product branching fractions and kinetic isotope effects. The following paper provides a detailed overview of SPIDRR and its advantages in the field of gas-phase catalysis research.
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Affiliation(s)
- M G Gutierrez
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
| | - Z Theis
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
| | - T W R Lewis
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
| | - D J Bellert
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
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13
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Hansen K. Tunneling and reflection in unimolecular reaction kinetic energy release distributions. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2017.12.075] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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14
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Suchan J, Hollas D, Curchod BFE, Slavíček P. On the importance of initial conditions for excited-state dynamics. Faraday Discuss 2018; 212:307-330. [DOI: 10.1039/c8fd00088c] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The vast majority of ab initio excited-state simulations are performed within semiclassical, trajectory-based approaches. Apart from the underlying electronic-structure theory, the reliability of the simulations is controlled by a selection of initial conditions for the classical trajectories. We discuss appropriate choices of initial conditions for simulations of different experimental arrangements: dynamics initiated by continuum-wave (CW) laser fields or triggered by ultrashort laser pulses.
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Affiliation(s)
- Jiří Suchan
- Department of Physical Chemistry
- University of Chemistry and Technology, Prague
- 16628 Prague
- Czech Republic
| | - Daniel Hollas
- Department of Physical Chemistry
- University of Chemistry and Technology, Prague
- 16628 Prague
- Czech Republic
| | | | - Petr Slavíček
- Department of Physical Chemistry
- University of Chemistry and Technology, Prague
- 16628 Prague
- Czech Republic
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15
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Rodríguez Pirani LS, Della Védova CO, Geronés M, Romano RM, Cavasso-Filho R, Ge M, Ma C, Erben MF. Electronic Properties and Dissociative Photoionization of Thiocyanates, Part III. The Effect of the Group’s Electronegativity in the Valence and Shallow-Core (Sulfur and Chlorine 2p) Regions of CCl 3SCN and CCl 2FSCN. J Phys Chem A 2017; 121:9201-9210. [DOI: 10.1021/acs.jpca.7b08395] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Lucas S. Rodríguez Pirani
- CEQUINOR
(UNLP − CONICET, CCT La Plata), Departamento de Química,
Facultad de Ciencias Exactas, Universidad Nacional de La Plata, Boulevard 120 e/60 y 64 No. 1465, La Plata CP 1900, República Argentina
| | - Carlos O. Della Védova
- CEQUINOR
(UNLP − CONICET, CCT La Plata), Departamento de Química,
Facultad de Ciencias Exactas, Universidad Nacional de La Plata, Boulevard 120 e/60 y 64 No. 1465, La Plata CP 1900, República Argentina
| | - Mariana Geronés
- CEQUINOR
(UNLP − CONICET, CCT La Plata), Departamento de Química,
Facultad de Ciencias Exactas, Universidad Nacional de La Plata, Boulevard 120 e/60 y 64 No. 1465, La Plata CP 1900, República Argentina
| | - Rosana M. Romano
- CEQUINOR
(UNLP − CONICET, CCT La Plata), Departamento de Química,
Facultad de Ciencias Exactas, Universidad Nacional de La Plata, Boulevard 120 e/60 y 64 No. 1465, La Plata CP 1900, República Argentina
| | - Reinaldo Cavasso-Filho
- Universidade Federal do ABC, Rua Catequese,
242, CEP 09090-400 Santo André, São Paulo, Brazil
| | - Maofa Ge
- State
Key Laboratory for Structural Chemistry of Unstable and Stable Species,
Beijing National Laboratory for Molecular Sciences (BNLMS), Institute
of Chemistry, Chinese Academy of Sciences, Beijing 100190, Peoples Republic of China
| | - Chunping Ma
- State
Key Laboratory for Structural Chemistry of Unstable and Stable Species,
Beijing National Laboratory for Molecular Sciences (BNLMS), Institute
of Chemistry, Chinese Academy of Sciences, Beijing 100190, Peoples Republic of China
| | - Mauricio F. Erben
- CEQUINOR
(UNLP − CONICET, CCT La Plata), Departamento de Química,
Facultad de Ciencias Exactas, Universidad Nacional de La Plata, Boulevard 120 e/60 y 64 No. 1465, La Plata CP 1900, República Argentina
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16
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Petersen AC. The main beam correction term in kinetic energy release from metastable peaks. JOURNAL OF MASS SPECTROMETRY : JMS 2017; 52:867-872. [PMID: 28843012 DOI: 10.1002/jms.4022] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2017] [Revised: 08/19/2017] [Accepted: 08/22/2017] [Indexed: 06/07/2023]
Abstract
The correction term for the precursor ion signal width in determination of kinetic energy release is reviewed, and the correction term is formally derived. The derived correction term differs from the traditionally applied term. An experimental finding substantiates the inaccuracy in the latter. The application of the "T-value" to study kinetic energy release is found preferable to kinetic energy release distributions when the metastable peaks are slim and simple Gaussians. For electronically predissociated systems, a "borderline zero" kinetic energy release can be directly interpreted in reaction dynamics with strong curvature in the reaction coordinate.
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Affiliation(s)
- Allan Christian Petersen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø, Denmark
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17
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Ekanayake N, Nairat M, Kaderiya B, Feizollah P, Jochim B, Severt T, Berry B, Pandiri KR, Carnes KD, Pathak S, Rolles D, Rudenko A, Ben-Itzhak I, Mancuso CA, Fales BS, Jackson JE, Levine BG, Dantus M. Mechanisms and time-resolved dynamics for trihydrogen cation (H 3+) formation from organic molecules in strong laser fields. Sci Rep 2017; 7:4703. [PMID: 28680157 PMCID: PMC5498647 DOI: 10.1038/s41598-017-04666-w] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2017] [Accepted: 05/18/2017] [Indexed: 11/09/2022] Open
Abstract
Strong-field laser-matter interactions often lead to exotic chemical reactions. Trihydrogen cation formation from organic molecules is one such case that requires multiple bonds to break and form. We present evidence for the existence of two different reaction pathways for H3+ formation from organic molecules irradiated by a strong-field laser. Assignment of the two pathways was accomplished through analysis of femtosecond time-resolved strong-field ionization and photoion-photoion coincidence measurements carried out on methanol isotopomers, ethylene glycol, and acetone. Ab initio molecular dynamics simulations suggest the formation occurs via two steps: the initial formation of a neutral hydrogen molecule, followed by the abstraction of a proton from the remaining CHOH2+ fragment by the roaming H2 molecule. This reaction has similarities to the H2 + H2+ mechanism leading to formation of H3+ in the universe. These exotic chemical reaction mechanisms, involving roaming H2 molecules, are found to occur in the ~100 fs timescale. Roaming molecule reactions may help to explain unlikely chemical processes, involving dissociation and formation of multiple chemical bonds, occurring under strong laser fields.
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Affiliation(s)
- Nagitha Ekanayake
- Department of Chemistry, Michigan State University, East Lansing, Michigan, 48824, USA
| | - Muath Nairat
- Department of Chemistry, Michigan State University, East Lansing, Michigan, 48824, USA
| | - Balram Kaderiya
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Peyman Feizollah
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Bethany Jochim
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Travis Severt
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Ben Berry
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Kanaka Raju Pandiri
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Kevin D Carnes
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Shashank Pathak
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Daniel Rolles
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Artem Rudenko
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Itzik Ben-Itzhak
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas, 66506, USA
| | - Christopher A Mancuso
- Department of Chemistry, Michigan State University, East Lansing, Michigan, 48824, USA
| | - B Scott Fales
- Department of Chemistry, Michigan State University, East Lansing, Michigan, 48824, USA
| | - James E Jackson
- Department of Chemistry, Michigan State University, East Lansing, Michigan, 48824, USA
| | - Benjamin G Levine
- Department of Chemistry, Michigan State University, East Lansing, Michigan, 48824, USA
| | - Marcos Dantus
- Department of Chemistry, Michigan State University, East Lansing, Michigan, 48824, USA. .,Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, 48824, USA.
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18
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Menges FS, Lang J, Nosenko Y, Kerner C, Gaffga M, Ghoochany LT, Thiel WR, Riehn C, Niedner-Schatteburg G. Exploring the Gas-Phase Activation and Reactivity of a Ruthenium Transfer Hydrogenation Catalyst by Experiment and Theory in Concert. J Phys Chem A 2017; 121:4422-4434. [PMID: 28509543 DOI: 10.1021/acs.jpca.7b02459] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
This study elucidates structures, activation barriers, and the gas-phase reactivity of cationic ruthenium transfer hydrogenation catalysts of the structural type [(η6-cym)RuX(pympyr)]+. In these complexes, the central ruthenium(+II) ion is coordinated to an η6-bound p-cymene (η6-cym), a bidentate 2-R-4-(2-pyridinyl)pyrimidine ligand (pympyr) with R = NH2 or N(CH3)2, and an anion X = I-, Br-, Cl-, or CF3SO3-. We present infrared multiple-photon dissociation (IR-MPD) spectra of precursors (before HCl loss) and of activated complexes (after HCl loss), which elucidates C-H activation as the key step in the activation mechanism. A resonant two-color IR-MPD scheme serves to record several otherwise "dark" bands and enhances the validity of spectral assignments. We show that collision-induced dissociation (CID)-derived activation energies of the [(η6-cym)RuX(pympyr)]+ (R = N(CH3)2) complexes depend crucially on the anion X. The obtained activation energies for the HX loss correlate well with quantum chemical activation barriers and are in line with the HSAB concept. We further elucidate the reaction of the activated complexes with D2 under single-collision conditions. Quantum mechanical simulations substantiate that the resulting species represent analogues for hydrido intermediates formed after abstraction of H+ and H- from isopropanol, as postulated for the catalytic cycle of transfer hydrogenation by us before.
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Affiliation(s)
- Fabian S Menges
- Department of Chemistry, Yale University , New Haven, Connecticut 06520, United States
| | - Johannes Lang
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
| | - Yevgeniy Nosenko
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
| | - Christian Kerner
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
| | - Maximilian Gaffga
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
| | - Leila Taghizadeh Ghoochany
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
| | - Werner R Thiel
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
| | - Christoph Riehn
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
| | - Gereon Niedner-Schatteburg
- Fachbereich Chemie and Forschungszentrum OPTIMAS, Technische Universität Kaiserslautern , 67663 Kaiserslautern, Germany
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20
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Mansell A, Theis Z, Gutierrez MG, Faza ON, Lopez CS, Bellert DJ. Submerged Barriers in the Ni(+) Assisted Decomposition of Propionaldehyde. J Phys Chem A 2016; 120:2275-84. [PMID: 27054589 DOI: 10.1021/acs.jpca.5b08444] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The reaction dynamics of the Ni(+) mediated decarbonylation of propionaldehyde was assessed using the single photon initiated decomposition rearrangement reaction (SPIDRR) technique. The exothermic production of Ni(+)CO was temporally monitored and the associated rate constants, k(E), were extracted as a function of activating photon energy. In addition, the reaction potential energy surface was calculated at the UCCSD(T)/def2-TZVP//PBEPBE/cc-pVDZ level of theory to provide an atomistic description of the reaction profile. The decarbonylation of propionaldehyde can be understood as proceeding through parallel competitive reaction pathways that are initiated by Ni(+) insertion into either the C-C or C-H bond of the propionaldehyde carbonyl carbon. Both paths lead to the elimination of neutral ethane and are governed by submerged barriers. The lower energy sequence is a consecutive C-C/C-H addition process with a submerged barrier of 14 350 ± 600 cm(-1). The higher energy sequence is a consecutive C-H/C-C addition process with a submerged barrier of 15 400 ± 600 cm(-1). Both barriers were determined using RRKM calculations fit to the experimentally determined k(E) values. The measured energy difference between the two barriers agrees with the DFT computed difference in rate limiting transition-state energies, 18 413 and 19 495 cm(-1).
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Affiliation(s)
- A Mansell
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
| | - Z Theis
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
| | - M G Gutierrez
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
| | - O Nieto Faza
- Departamento de Quimica Organica, Universidad de Vigo , 36310, Vigo, Spain
| | - C Silva Lopez
- Departamento de Quimica Organica, Universidad de Vigo , 36310, Vigo, Spain
| | - D J Bellert
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
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21
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Maner JA, Mauney DT, Duncan MA. Imaging charge transfer in a cation-π system: velocity-map imaging of Ag(+)(benzene) photodissociation. J Phys Chem Lett 2015; 6:4493-4498. [PMID: 26512816 DOI: 10.1021/acs.jpclett.5b02240] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Ag(+)(benzene) complexes are generated in the gas phase by laser vaporization and mass selected in a time-of-flight spectrometer. UV laser excitation at either 355 or 266 nm results in dissociative charge transfer (DCT), leading to neutral silver atom and benzene cation products. Kinetic energy release in translationally hot benzene cations is detected using a new instrument designed for photofragment imaging of mass-selected ions. Velocity-map imaging and slice imaging techniques are employed. In addition to the expected translational energy release, DCT of Ag(+)(benzene) produces a distribution of internally hot benzene cations. Compared with experiments at 355 nm, 266 nm excitation produces only slightly higher translational excitation and a much greater fraction of internally hot benzene ions. The maximum kinetic energy release in the photodissociation sets an upper limit on the Ag(+)(benzene) dissociation energy of 32.8 (+1.4/-1.5) kcal/mol.
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Affiliation(s)
- Jonathon A Maner
- Department of Chemistry, University of Georgia , 140 Cedar Street, Athens, Georgia 30602, United States
| | - Daniel T Mauney
- Department of Chemistry, University of Georgia , 140 Cedar Street, Athens, Georgia 30602, United States
| | - Michael A Duncan
- Department of Chemistry, University of Georgia , 140 Cedar Street, Athens, Georgia 30602, United States
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22
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Berrueta Martínez Y, Bava YB, Erben MF, Cavasso Filho RL, Romano RM, Della Védova CO. Photoexcitation, photoionization, and photofragmentantion of CF3CF2CF2C(O)Cl using synchrotron radiation between 13 and 720 eV. J Phys Chem A 2015; 119:1894-905. [PMID: 25679054 DOI: 10.1021/jp5122504] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The main inner shell ionization edges of gaseous CF3CF2CF2C(O)Cl, including Cl 2p, C 1s, O 1s, and F 1s, have been measured in Total Ion Yield (TIY) mode by using tunable synchrotron radiation, and several resonance transitions have been assigned with the help of quantum chemical calculations. Interestingly, resonance transitions observed in the C 1s region can be assigned to different carbon atoms in the molecule according to the degree of fluorine substitution. Ionic photofragmentation processes have been studied by time-of-flight mass spectrometry in the Photoelectron-Photoion-Coincidence (PEPICO) and Photoelectron-Photoion-Photoion-Coincidence (PEPIPICO) modes. These techniques revealed a "memory-lost" effect especially around the C 1s region, since the fragmentation events are independent of the energy range considered. Moreover, different fragmentation mechanisms were inferred from these spectra in the valence (13.0-21.0 eV) as well as in the inner (180.0-750.0 eV) electronic energy regions. The vibrational spectral features of CF3CF2CF2C(O)Cl have been interpreted in terms of a conformational equilibrium between two conformations (gauche and anti of the CC single bond with respect to the CCl one) at room temperature, as determined from quantum chemical calculations and the detailed analysis of the infrared spectrum.
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Affiliation(s)
- Yanina Berrueta Martínez
- CEQUINOR (UNLP-CONICET), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata , 47 esq. 115, 1900 La Plata, República Argentina
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23
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24
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Rodríguez Pirani LS, Erben MF, Geronés M, Romano RM, Cavasso Filho RL, Ma C, Ge M, Della Védova CO. Electronic properties of FC(O)SCH2CH3. a combined helium(I) photoelectron spectroscopy and synchrotron radiation study. J Phys Chem A 2014; 118:5950-60. [PMID: 25019560 DOI: 10.1021/jp412564u] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The valence electronic properties of S-ethyl flouromethanethioate (S-ethyl fluoromethsanethioate), FC(O)SCH2CH3, were investigated by means of He(I) photoelectron spectroscopy in conjunction with the analysis of the photofragmentation products determined by PEPICO (phtoelectron-photoion-coincidence) by using synchrotron radiation in the 11.1-21.6 eV photon energy range. The first band observed at 10.28 eV in the HeI photoelectron spectrum can be assigned with confidence to the ionization process from the HOMO [nπ(S) orbital], which is described as a lone pair formally localized on the sulfur atom, in agreement with quantum chemical calculations using the outer valence Green function method [OVGF/6-311++G (d,p)]. One of the most important fragmentation channels also observed in the valence region corresponds to the decarbonylation process yielding the [M-CO](·+) ion, which is clearly observed at m/z = 80. Moreover, S 2p and S 2s absorption edges have been examined by measuring the total ion yield spectra in the 160-240 eV region using variable synchrotron radiation. The dynamic of ionic fragmentation following the Auger electronic decay has been evaluated with the help of the PEPIPICO (photoion-photoion-photoelectron-coincidence spectra) technique.
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Affiliation(s)
- Lucas S Rodríguez Pirani
- CEQUINOR (CONICET-UNLP), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata , C. C. 962 (1900) La Plata, República Argentina
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Bull JN, Lee JWL, Gardiner SH, Vallance C. An introduction to velocity-map imaging mass spectrometry (VMImMS). EUROPEAN JOURNAL OF MASS SPECTROMETRY (CHICHESTER, ENGLAND) 2014; 20:117-129. [PMID: 24895772 DOI: 10.1255/ejms.1264] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
This account introduces a new variant of time-of-flight mass spectrometry, termed velocity-map imaging mass spectrometry (VMImMS). While the ion abundances recorded in conventional ToF-MS measurements are highly useful for molecular quantification and structure determination, the final parent and fragment ion yields are Largely blind to the dynamics of the processes in which the ions were formed inside the mass spectrometer. By recording the velocity distribution of each ion in tandem with the mass spectrum, not only can the details of the dissociative ionisation dynamics be unravelled, but the extra dimensions of information can be used for enhanced molecular fingerprinting, separating contributions from ions with identical mass-to-charge ratio and resolving components within mixtures, to name but a few examples. Measuring ion-velocity distributions within a mass spectrometry measurement is not new, but incorporating imaging techniques developed within the reaction dynamics community provides vastly improved velocity resolution for all ions simultaneously in a single-stage instrument. This account provides an introduction to VMImMS, outlines the fundamental instrumentation and detector requirements and the challenges associated with developing the method further, and details proof-of-concept work from our Laboratory on a number of potential applications of the technique.
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26
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Teyssier C, Fillol R, Abdoul-Carime H, Farizon B, Farizon M, Märk TD. A novel "correlated ion and neutral time of flight" method: event-by-event detection of neutral and charged fragments in collision induced dissociation of mass selected ions. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2014; 85:015118. [PMID: 24517823 DOI: 10.1063/1.4863015] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
A new tandem mass spectrometry (MS/MS) method based on time of flight measurements performed on an event-by-event detection technique is presented. This "correlated ion and neutral time of flight" method allows to explore Collision Induced Dissociation (CID) fragmentation processes by directly identifying not only all ions and neutral fragments produced but also their arrival time correlations within each single fragmentation event from a dissociating molecular ion. This constitutes a new step in the characterization of molecular ions. The method will be illustrated here for a prototypical case involving CID of protonated water clusters H(+)(H2O)n = 1-5 upon collisions with argon atoms.
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Affiliation(s)
- C Teyssier
- Institut de Physique Nucléaire de Lyon, UMR5822, Université Lyon 1, F-69622, Villeurbanne, France; Université de Lyon, F-69003, Lyon, France; and CNRS/IN2P3, F-69622, Villeurbanne, France
| | - R Fillol
- Institut de Physique Nucléaire de Lyon, UMR5822, Université Lyon 1, F-69622, Villeurbanne, France; Université de Lyon, F-69003, Lyon, France; and CNRS/IN2P3, F-69622, Villeurbanne, France
| | - H Abdoul-Carime
- Institut de Physique Nucléaire de Lyon, UMR5822, Université Lyon 1, F-69622, Villeurbanne, France; Université de Lyon, F-69003, Lyon, France; and CNRS/IN2P3, F-69622, Villeurbanne, France
| | - B Farizon
- Institut de Physique Nucléaire de Lyon, UMR5822, Université Lyon 1, F-69622, Villeurbanne, France; Université de Lyon, F-69003, Lyon, France; and CNRS/IN2P3, F-69622, Villeurbanne, France
| | - M Farizon
- Institut de Physique Nucléaire de Lyon, UMR5822, Université Lyon 1, F-69622, Villeurbanne, France; Université de Lyon, F-69003, Lyon, France; and CNRS/IN2P3, F-69622, Villeurbanne, France
| | - T D Märk
- Institut für Ionenphysik und Angewandte Physik, Leopold Franzens Universität Innsbruck, Technikerstrasse 25, A-6020 Innsbruck, Austria
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27
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Lang M, Holzmeier F, Fischer I, Hemberger P. Threshold Photoionization of Fluorenyl, Benzhydryl, Diphenylmethylene, and Their Dimers. J Phys Chem A 2013; 117:5260-8. [DOI: 10.1021/jp403158z] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Melanie Lang
- Institute of Physical and Theoretical
Chemistry, University of Würzburg, Am Hubland, D-97074 Würzburg, Germany
| | - Fabian Holzmeier
- Institute of Physical and Theoretical
Chemistry, University of Würzburg, Am Hubland, D-97074 Würzburg, Germany
| | - Ingo Fischer
- Institute of Physical and Theoretical
Chemistry, University of Würzburg, Am Hubland, D-97074 Würzburg, Germany
| | - Patrick Hemberger
- Molecular Dynamics Group, Paul Scherrer Institut (PSI), CH-5232 Villigen PSI,
Switzerland
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Abstract
This document contains recommendations for terminology in mass spectrometry.
Development of standard terms dates back to 1974 when the IUPAC Commission on
Analytical Nomenclature issued recommendations on mass spectrometry terms and
definitions. In 1978, the IUPAC Commission on Molecular Structure and
Spectroscopy updated and extended the recommendations and made further
recommendations regarding symbols, acronyms, and abbreviations. The IUPAC
Physical Chemistry Division Commission on Molecular Structure and Spectroscopy’s
Subcommittee on Mass Spectroscopy revised the recommended terms in 1991 and
appended terms relating to vacuum technology. Some additional terms related to
tandem mass spectrometry were added in 1993 and accelerator mass spectrometry in
1994. Owing to the rapid expansion of the field in the intervening years,
particularly in mass spectrometry of biomolecules, a further revision of the
recommendations has become necessary. This document contains a comprehensive
revision of mass spectrometry terminology that represents the current consensus
of the mass spectrometry community.
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Dzyuba EV, Poppenberg J, Richter S, Troff RW, Schalley CA. Mass Spectrometry and Gas-Phase Chemistry of Supermolecules: A Primer. Supramol Chem 2012. [DOI: 10.1002/9780470661345.smc027] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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30
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Baer T, Walker SH, Shuman NS, Bodi A. One- and Two-Dimensional Translational Energy Distributions in the Iodine-Loss Dissociation of 1,2-C2H4I2+ and 1,3-C3H6I2+: What Does This Mean? J Phys Chem A 2012; 116:2833-44. [DOI: 10.1021/jp2121643] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Tomas Baer
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina
27599-3290, United States
| | - S. Hunter Walker
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina
27599-3290, United States
| | - Nicholas S. Shuman
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina
27599-3290, United States
| | - Andras Bodi
- Molecular Dynamics Group, Paul Scherrer Institut, Villigen 5232, Switzerland
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Geronés M, Erben MF, Romano RM, Cavasso Filho RL, Della Védova CO. Interstellar H3+ and HCS+ Ions Produced in the Dissociative Photoionization Process of CH3C(O)SCH3 in the Proximity of the Sulfur 2p, Carbon 1s, and Oxygen 1s Edges. J Phys Chem A 2012; 116:2571-82. [DOI: 10.1021/jp212238c] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Mariana Geronés
- CEQUINOR (CONICET-UNLP), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, C. C. 962 (1900) La Plata, República
Argentina
| | - Mauricio F. Erben
- CEQUINOR (CONICET-UNLP), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, C. C. 962 (1900) La Plata, República
Argentina
| | - Rosana M. Romano
- CEQUINOR (CONICET-UNLP), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, C. C. 962 (1900) La Plata, República
Argentina
| | | | - Carlos O. Della Védova
- CEQUINOR (CONICET-UNLP), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, C. C. 962 (1900) La Plata, República
Argentina
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Stace AJ, Bichoutskaia E. Reply to the ‘Comment on “Treating highly charged carbon and fullerene clusters as dielectric particles”’ by H. Zettergren and H. Cederquist, Phys. Chem. Chem. Phys., 2012, 14, DOI: 10.1039/c2cp42883k. Phys Chem Chem Phys 2012. [DOI: 10.1039/c2cp43407e] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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Hemberger P, Bodi A, Schon C, Steinbauer M, Fischer KH, Kaiser C, Fischer I. A pass too far: dissociation of internal energy selected paracyclophane cations, theory and experiment. Phys Chem Chem Phys 2012; 14:11920-9. [DOI: 10.1039/c2cp40905d] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Rodríguez Pirani LS, Geronés M, Della Védova CO, Romano RM, Fantoni A, Cavasso-Filho R, Ma C, Ge M, Erben MF. Electronic properties and dissociative photoionization of thiocyanates. Part II. Valence and shallow-core (sulfur and chlorine 2p) regions of chloromethyl thiocyanate, CH2ClSCN. J Phys Chem A 2011; 116:231-41. [PMID: 22098365 DOI: 10.1021/jp208232t] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
A combination of photoelectron spectroscopy and synchrotron based photoelectron photoion coincidence (PEPICO) spectra has been applied to investigate the electronic structure and the dissociative ionization of the CH(2)ClSCN molecule in the valence region. The PES is assigned with the electronic structure calculations at the outer-valence Green's function and symmetry adapted cluster/configuration interaction (SAC-CI) levels offer an explanation of our experimental results. Upon vacuum ultraviolet irradiation the low-lying radical cation, located at 10.39 eV is formed. The molecular ion is observed in the time-of-flight mass spectra, together with the CH(2)SCN(+) and CH(2)Cl(+) daughter ions. The total ion yield spectra have been measured in the S 2p and Cl 2p regions and several channels have been determined in dissociative photoionization events for the core-excited species. Thus, by using time-of-flight mass spectrometry and synchrotron radiation the relative abundances of the ionic fragments and their kinetic energy release values were obtained from both PEPICO and photoelectron photoion photoion coincidence spectra. Possible fragmentation processes are discussed and compared with that found for the related CH(3)SCN species.
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Affiliation(s)
- Lucas S Rodríguez Pirani
- CEQUINOR (UNLP-CONICET, CCT La Plata), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CC 962, La Plata (CP 1900), República Argentina
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Katayanagi H, Mitsuke K. Mass-analyzed velocity map imaging of doubly charged photofragments from C70. J Chem Phys 2011; 135:144307. [PMID: 22010718 DOI: 10.1063/1.3650371] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The velocity distributions of the fragments produced by dissociative photoionization of C(70) have been measured at several photon energies in the extreme UV region, by using a flight-time resolved velocity map imaging (VMI) technique combined with a high-temperature molecular beam and synchrotron radiation. Average kinetic energy release was estimated for the six reaction steps of consecutive C(2) emission, starting from C(70)(2+) → C(68)(2+) + C(2) to C(60)(2+)→ C(58)(2+) + C(2). The total kinetic energy generated in each step shows a general tendency to increase with increasing hν, except for the first and fifth steps. This propensity reflects statistical redistributions of the excess energy in the transition states for the above fragmentation mechanism. Analysis based on the finite-heat-bath theory predicts the detectable minimum cluster sizes at the end of the C(2)-emission decay chain. They accord well with the minimum sizes of the observed ions, if the excess energy in the primary C(70)(2+) is assumed to be smaller by ~15 eV than the maximum available energy. The present VMI experiments reveal remarkably small kinetic energy release in the fifth step, in contradiction to theoretical predictions, which suggests involvement of other fragmentation mechanisms in the formation of C(60)(2+).
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Pirani LSR, Erben MF, Geronés M, Ma C, Ge M, Romano RM, Filho RLC, Della Védova CO. Outermost and inner-shell electronic properties of ClC(O)SCH2CH3 studied using HeI photoelectron spectroscopy and synchrotron radiation. J Phys Chem A 2011; 115:5307-18. [PMID: 21553925 DOI: 10.1021/jp112182x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
A study of valence electronic properties of S-ethyl chlorothioformate (S-ethyl chloromethanethioate), ClC(O)SCH(2)CH(3), using HeI photoelectron spectra (PES) and synchrotron radiation is presented. Moreover, the photon impact excitation and dissociation dynamics of ClC(O)SCH(2)CH(3) excited at the S 2p and Cl 2p levels are elucidated by analyzing the total ion yield (TIY) spectra and time-of-flight mass spectra acquired in multicoincidence mode [photoelectron-photoion coincidence (PEPICO) and photoelectron-photoion-photoion coincidence (PEPIPICO)]. The HeI photoelectron spectrum is dominated by features associated with lone-pair electrons from the ClC(O)S- group, the HOMO at 9.84 eV being assigned to the n(π)(S) sulfur lone-pair orbital. Whereas the formation of C(2)H(5)(+) ion dominates the fragmentation in the valence energy region, the most abundant ion formed in both the S and Cl 2p energy ranges is C(2)H(3)(+). Comparison with related XC(O)SR (X = H, F, Cl and R = -CH(3), -C(2)H(5)) species reveals the impact of the alkyl chain on the photodissociation behavior of S-alkyl (halo)thioformates.
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Affiliation(s)
- Lucas S Rodríguez Pirani
- CEQUINOR (CONICET-UNLP), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, C. C. 962 (1900) La Plata, República Argentina
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Katayanagi H, Mitsuke K. Communication: Mass-analyzed velocity map imaging of thermal photofragments from C60. J Chem Phys 2010; 133:081101. [DOI: 10.1063/1.3475515] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
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38
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Donald WA, Williams ER. Measuring the extent and width of internal energy deposition in ion activation using nanocalorimetry. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2010; 21:615-625. [PMID: 20106678 DOI: 10.1016/j.jasms.2009.12.006] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2009] [Revised: 12/14/2009] [Accepted: 12/15/2009] [Indexed: 05/28/2023]
Abstract
The recombination energies resulting from electron capture by a positive ion can be accurately measured using hydrated ion nanocalorimetry in which the internal energy deposition is obtained from the number of water molecules lost from the reduced cluster. The width of the product ion distribution in these experiments is predominantly attributable to the distribution of energy that partitions into the translational and rotational modes of the water molecules that are lost. These results are consistent with a singular value for the recombination energy. For large clusters, the width of the energy distribution is consistent with rapid energy partitioning into internal vibrational modes. For some smaller clusters with high recombination energies, the measured product ion distribution is narrower than that calculated with a statistical model. These results indicate that initial water molecule loss occurs on the time scale of, or faster than energy randomization. This could be due to inherently slow internal conversion or it could be due to a multi-step process, such as initial ion-electron pair formation followed by reduction of the ion in the cluster. These results provide additional evidence for the accuracy with which condensed phase thermochemical values can be deduced from gaseous nanocalorimetry experiments.
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Affiliation(s)
- William A Donald
- Department of Chemistry, University of California-Berkeley, Berkeley, California 94720-1460, USA
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39
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Castleberry VA, Dee SJ, Villarroel OJ, Laboren IE, Frey SE, Bellert DJ. The low-energy unimolecular reaction rate constants for the gas phase, Ni+-mediated dissociation of the C-C sigma bond in acetone. J Phys Chem A 2009; 113:10417-24. [PMID: 19725574 DOI: 10.1021/jp904561y] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The time dependence of the gaseous unimolecular decomposition of the jet-cooled adduct ion, Ni+-OC(CH3)2, was monitored through selective detection of the Ni+CO fragment ion. Various resolved amounts of energy in the range 15600-18800 cm(-1) were supplied to initiate the dissociation reaction through absorption of laser photons by the title molecular complex. First-order rate constants, k(E), ranged from 113000 to 55000 s(-1) and decreased with decreasing amounts of internal excitation. The energy used to initiate the reaction is well below that required to fragment C-C sigma bonds and indicates the necessity of the Ni+ cation to induce bond activation and fragmentation. These measurements are carried out in a unique apparatus and represent the first direct kinetic study of such catalytic type reactions.
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Affiliation(s)
- Vanessa A Castleberry
- Department of Chemistry and Biochemistry, Baylor University, One Bear Place #97348, Waco, Texas 76798-7348, USA
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40
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Cortés E, Della Védova CO, Geronés M, Romano RM, Erben MF. Perchloromethyl Mercaptan, CCl3SCl, Excited with Synchrotron Radiation in the Proximity of the Sulfur and Chlorine 2p Edges: Dissociative Photoionization of Highly Halogenated Species. J Phys Chem A 2009; 113:9624-32. [DOI: 10.1021/jp904515u] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Emiliano Cortés
- CEQUINOR (UNLP - CONICET, CCT La Plata), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional
de La Plata, CC 962, La Plata (CP 1900), República Argentina,
and Laboratorio de Servicios a la Industria y al Sistema Científico
(LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903)
Gonnet, República Argentina
| | - Carlos O. Della Védova
- CEQUINOR (UNLP - CONICET, CCT La Plata), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional
de La Plata, CC 962, La Plata (CP 1900), República Argentina,
and Laboratorio de Servicios a la Industria y al Sistema Científico
(LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903)
Gonnet, República Argentina
| | - Mariana Geronés
- CEQUINOR (UNLP - CONICET, CCT La Plata), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional
de La Plata, CC 962, La Plata (CP 1900), República Argentina,
and Laboratorio de Servicios a la Industria y al Sistema Científico
(LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903)
Gonnet, República Argentina
| | - Rosana M. Romano
- CEQUINOR (UNLP - CONICET, CCT La Plata), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional
de La Plata, CC 962, La Plata (CP 1900), República Argentina,
and Laboratorio de Servicios a la Industria y al Sistema Científico
(LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903)
Gonnet, República Argentina
| | - Mauricio F. Erben
- CEQUINOR (UNLP - CONICET, CCT La Plata), Departamento
de Química, Facultad de Ciencias Exactas, Universidad Nacional
de La Plata, CC 962, La Plata (CP 1900), República Argentina,
and Laboratorio de Servicios a la Industria y al Sistema Científico
(LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903)
Gonnet, República Argentina
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41
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Poterya V, Profant V, Fárník M, Šištík L, Slavíček P, Buck U. Photoinduced Processes in Hydrogen Bonded System: Photodissociation of Imidazole Clusters. J Phys Chem A 2009; 113:14583-90. [DOI: 10.1021/jp904145q] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | | | | | | | | | - Udo Buck
- Max-Planck Institut für Dynamik und Selbstorganisation, Bunsenstrasse 10, D-37073 Göttingen, Germany
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42
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Ramos CIV, Santana-Marques MG, Enes RF, Tomé AC, Cavaleiro JAS, Nogueras M. Gas-phase fragmentation of protonated C60-pyrimidine derivatives. JOURNAL OF MASS SPECTROMETRY : JMS 2009; 44:911-919. [PMID: 19194997 DOI: 10.1002/jms.1564] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Electrospray ionization mass spectrometry/mass spectrometry (ESI/MS/MS) and multiple stage mass spectrometry (MSn, n > 2) were used in the positive ion mode, with two different types of mass spectrometers, a quadrupole time-of-flight and an ion trap, to characterize two sets of different types of C60-aminopyrimidine exohedral derivatives. In one set, the pyrimidine moiety bears an amino acid methyl ester residue, and in the other the pyrimidine ring is part of a nucleoside-type moiety, the latter existing as two separated diastereoisomers.We have found that retro-cycloaddition processes occur for the closed shell protonated species formed by electrospraying C60 derivatives synthesized by Diels-Alder reactions, whereas for the C60 derivatives synthesized via 1,3-dipolar cycloadditions, these processes did not occur. Formation of diagnostic ions allowed the differentiation between the two groups of fullerene derivatives, and between the diastereoisomers of C60 derivatives with a nucleoside-type moiety. In general, the fragmentation processes are strongly dependent on the protonation sites and on the structure of the exohedral moieties.
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Affiliation(s)
- Catarina I V Ramos
- Mass Spectrometry Laboratory, Department of Chemistry, University of Aveiro, 3810-193 Aveiro, Portugal
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43
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Jaksch S, Ferreira da Silva F, Denifl S, Echt O, Märk TD, Scheier P. Experimental evidence for the existence of an electronically excited state of the proposed dihydrogen radical cation He-H-H-He+. Chemistry 2009; 15:4190-4. [PMID: 19248067 DOI: 10.1002/chem.200802545] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Survival of the weakest: The existence of a new class of centrosymmetric radical cations in which H(2) bridges two identical main group elements was recently proposed in this journal by Uggerud and co-workers. By growing complexes inside helium nanodroplets at subkelvin temperatures, we obtained experimental evidence for the existence of the most weakly bound member of this class, He-H-H-He(+) (see picture), although in a metastable, electronically excited state.In a recent report, Uggerud and co-workers (A. Krapp et al., Chem. Eur. J. 2008, 14, 4028) proposed the existence of a new class of radical cations in which a dihydrogen bridges two identical main group elements. Upon electron impact ionization of helium nanodroplets doped with one or more H(2) molecules we observe various He(x)H(y) (+) cluster ions, including He(2)H(2) (+), which would belong to the proposed class of radical cations. Mass-analyzed kinetic energy scans reveal that the ion is metastable; it dissociates in the field-free region of the mass spectrometer. One reaction is into HeH(2) (+) + He with a low kinetic energy release of 15+/-4 meV. Surprisingly, another unimolecular reaction is observed, into HeH(+) + HeH (or He + H). The probability of this reaction is an order of magnitude higher, and the average kinetic energy release is four times larger. These findings suggest the presence of a metastable electronically excited state; they are consistent with the proposed linear, centrosymmetric ion structure of He-H-H-He(+).
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Affiliation(s)
- Stefan Jaksch
- Institut für Ionenphysik und Angewandte Physik, Leopold Franzens Universität, Technikerstrasse 25, 6020 Innsbruck, Austria
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Cortés E, Erben MF, Geronés M, Romano RM, Della Védova CO. Dissociative Photoionization of Methyl Thiocyanate, CH3SCN, in the Proximity of the Sulfur 2p Edge. J Phys Chem A 2008; 113:564-72. [DOI: 10.1021/jp807230s] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Emiliano Cortés
- CEQUINOR (UNLP-CONICET, CCT La Plata), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CC 962, La Plata (CP 1900), República Argentina and Laboratorio de Servicios a la Industria y al Sistema Científico (LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903) Gonnet, República Argentina
| | - Mauricio F. Erben
- CEQUINOR (UNLP-CONICET, CCT La Plata), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CC 962, La Plata (CP 1900), República Argentina and Laboratorio de Servicios a la Industria y al Sistema Científico (LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903) Gonnet, República Argentina
| | - Mariana Geronés
- CEQUINOR (UNLP-CONICET, CCT La Plata), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CC 962, La Plata (CP 1900), República Argentina and Laboratorio de Servicios a la Industria y al Sistema Científico (LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903) Gonnet, República Argentina
| | - Rosana M. Romano
- CEQUINOR (UNLP-CONICET, CCT La Plata), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CC 962, La Plata (CP 1900), República Argentina and Laboratorio de Servicios a la Industria y al Sistema Científico (LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903) Gonnet, República Argentina
| | - Carlos O. Della Védova
- CEQUINOR (UNLP-CONICET, CCT La Plata), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, CC 962, La Plata (CP 1900), República Argentina and Laboratorio de Servicios a la Industria y al Sistema Científico (LaSeISiC) (UNLP-CIC-CONICET), Camino Centenario e/505 y 508, (1903) Gonnet, República Argentina
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Yoon OK, Robbins MD, Zuleta IA, Barbula GK, Zare RN. Continuous time-of-flight ion imaging: application to fragmentation. Anal Chem 2008; 80:8299-307. [PMID: 18837560 DOI: 10.1021/ac801512n] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We have designed and constructed a continuous imaging reflectron time-of-flight mass spectrometer (TOFMS) that provides a mass spectrum at every pixel of a two-dimensional image with a 100% duty cycle. The technique is based on pseudorandom ion beam modulation and three-dimensional ( x, y, t) ion imaging. We use a multichannel plate detector with a delay-line anode that provides x, y positions and flight times t of every ion arrival event. The precision of the peak heights in the 100% duty cycle mass spectra is shown to be enhanced even at short (10 ms) acquisition times, which should prove useful for the study of solution kinetics or fast chromatographic separations. As a demonstration of the system's capability, we have imaged the fragmented ions that underwent surface-induced dissociation inside the reflectron and the ions that fragmented spontaneously through postsource decay.
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Affiliation(s)
- Oh Kyu Yoon
- Department of Chemistry, Stanford University, Stanford California 94305-5080, USA
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Gridelet E, Locht R, Lorquet AJ, Lorquet JC, Leyh B. The Role of Long-Range Forces in the Determination of Translational Kinetic Energy Release. Loss of C4H4+ from the Benzene and Pyridine Cations. J Phys Chem A 2008; 112:10086-95. [DOI: 10.1021/jp8033424] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- E. Gridelet
- Department of Chemistry, University of Liège, Sart-Tilman (B6), B-4000 Liège 1, Belgium
| | - R. Locht
- Department of Chemistry, University of Liège, Sart-Tilman (B6), B-4000 Liège 1, Belgium
| | - A. J. Lorquet
- Department of Chemistry, University of Liège, Sart-Tilman (B6), B-4000 Liège 1, Belgium
| | - J. C. Lorquet
- Department of Chemistry, University of Liège, Sart-Tilman (B6), B-4000 Liège 1, Belgium
| | - B. Leyh
- Department of Chemistry, University of Liège, Sart-Tilman (B6), B-4000 Liège 1, Belgium
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Calvo F, Lépine F, Baguenard B, Pagliarulo F, Concina B, Bordas C, Parneix P. Evidence for cluster shape effects on the kinetic energy spectrum in thermionic emission. J Chem Phys 2007; 127:204312. [PMID: 18052432 DOI: 10.1063/1.2804861] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Experimental kinetic energy release distributions obtained for the thermionic emission from C(n) (-) clusters, 10< or =n< or =20, exhibit significant non-Boltzmann variations. Using phase space theory, these different features are analyzed and interpreted as the consequence of contrasting shapes in the daughter clusters; linear and nonlinear isomers have clearly distinct signatures. These results provide a novel indirect structural probe for atomic clusters associated with their thermionic emission spectra.
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Affiliation(s)
- F Calvo
- LASIM, Université Claude Bernard Lyon 1, 43 Blvd. du 11 Novembre 1918, Villeurbanne Cedex, France.
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48
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Solano Espinoza EA, Stashenko E, Martínez J, Mora U, Kouznetsov V. Linear free energy relationships in C-N bond dissociations in molecular ions of 4-substituted N-(2-furylmethyl)anilines in the gas phase. JOURNAL OF MASS SPECTROMETRY : JMS 2007; 42:1496-503. [PMID: 17687763 DOI: 10.1002/jms.1258] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
The substituent effect on the reactivity of the C-N bond of molecular ions of 4-substituted N-(2-furylmethyl)anilines toward two dissociation pathways was studied. With this aim, six of these compounds were analyzed by mass spectrometry using electron ionization with energies between 7.8 and 69.9 eV. Also, the UB3LYP/6-31G (d,p) and UHF/6-31G (d, p) levels of theory were used to calculate the critical energies (reaction enthalpies at 0 K) of the processes that lead to the complementary ions [C(5)H(5)O](+) and [M - C(5)H(5)O](+), assuming structures that result from the heterolytic and homolytic C-N bond cleavages of the molecular ions, respectively. A kinetic approach proposed in the 1960s was applied to the mass spectral data to obtain the relative rate coefficients for both dissociation channels from ratios of the peak intensities of these ions. Linear relationships were obtained between the logarithms of the relative rate coefficients and the calculated critical energies and other thermochemical properties, whose slopes showed to be conditioned by the energy provided to the compounds within the ion source. Moreover, it was found that the dissociation that leads to [C(5)H(5)O](+) is a process strongly dependent upon the electron withdrawing or donating properties of the substituent, favored by those factors that destabilize the molecular ion. On the contrary, the dissociation that leads to [M - C(5)H(5)O](+) is indifferent to the polar electronic effects of the substituent. The abundance of both products was governed by the rule of Stevenson-Audier, according to which the major ion is the one of less negative electronic affinity.
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Affiliation(s)
- Eduardo A Solano Espinoza
- Centro de Investigación en Biomoléculas, Cibimol, Escuela de Química, Universidad Industrial de Santander, A. A. 678, Bucaramanga, Colombia.
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Lepère V, Lucas B, Barat M, Fayeton JA, Picard VJ, Jouvet C, Çarçabal P, Nielsen I, Dedonder-Lardeux C, Grégoire G, Fujii A. Comprehensive characterization of the photodissociation pathways of protonated tryptophan. J Chem Phys 2007; 127:134313. [DOI: 10.1063/1.2770458] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023] Open
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Lee M, Kim MS. Vibrational spectroscopy and state-specific dissociation dynamics for vinyl chloride cation in the B state. J Phys Chem A 2007; 111:8409-15. [PMID: 17676716 DOI: 10.1021/jp0718810] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
C(2)H(3)(35)Cl+ in the ground vibronic state was generated by one-photon mass-analyzed threshold ionization spectrometry, and its photodissociation in the 461-406 nm range was investigated. Ionization energy to the ground state of C(2)H(3)(35)Cl+ was 10.0062 +/- 0.0006 eV while its B state onset was higher by 2.7456 +/- 0.0003 eV. A vibrational spectrum of the cation in the B state obtained by recording the product ion yield as a function of wavelength was analyzed by referring to the quantum chemical results at the TDDFT/B3LYP/6-311++(df,pd) level. Analysis of product time-of-flight profiles recorded with different laser polarization angles showed that the dissociation pathway for the cation in the B state changed with the vibrational energy, from internal conversion to X and statistical dissociation therein to curve crossing to C and repulsive dissociation therein. B --> C curve crossing seemed to occur along a direction close to the C-Cl bond stretch.
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Affiliation(s)
- Mina Lee
- Department of Chemistry, Seoul National University, Seoul 151-742, Korea
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