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Duan L, Mo Z, Li K, Pi K, Luo J, Que Y, Zhang Q, Zhang J, Wu G, Liu R. Non-additive expression genes play a critical role in leaf vein ratio heterosis in Nicotiana tabacum L. BMC Genomics 2024; 25:924. [PMID: 39363277 PMCID: PMC11451143 DOI: 10.1186/s12864-024-10821-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Accepted: 09/20/2024] [Indexed: 10/05/2024] Open
Abstract
Heterosis, recognized for improving crop performance, especially in the first filial (F1) generation, remains an area of significant study in the tobacco industry. The low utilization of leaf veins in tobacco contributes to economic inefficiency and resource waste. Despite the positive impacts of heterosis on crop genetics, investigations into leaf-vein ratio heterosis in tobacco have been lacking. Understanding the mechanisms underlying negative heterosis in leaf vein ratio at the molecular level is crucial for advancing low vein ratio leaf breeding research. This study involved 12 hybrid combinations and their parental lines to explore heterosis associated with leaf vein ratios. The hybrids displayed diverse patterns of positive or negative leaf vein ratio heterosis across different developmental stages. Notably, the F1 hybrid (G70 × Qinggeng) consistently exhibited substantial negative heterosis, reaching a maximum of -19.79% 80 days after transplanting. A comparative transcriptome analysis revealed that a significant proportion of differentially expressed genes (DEGs), approximately 39.04% and 23.73%, exhibited dominant and over-dominant expression patterns, respectively. These findings highlight the critical role of non-additive gene expression, particularly the dominance pattern, in governing leaf vein ratio heterosis. The non-additive genes, largely associated with various GO terms such as response to abiotic stimuli, galactose metabolic process, plant-type cell wall organization, auxin-activated signaling pathway, hydrolase activity, and UDP-glycosyltransferase activity, were identified. Furthermore, KEGG enrichment analysis unveiled their involvement in phenylpropanoid biosynthesis, galactose metabolism, plant hormone signal transduction, glutathione metabolism, MAPK signaling pathway, starch, and sucrose metabolism. Among the non-additive genes, we identified some genes related to leaf development, leaf size, leaf senescence, and cell wall extensibility that showed significantly lower expression in F1 than in its parents. These results indicate that the non-additive expression of genes plays a key role in the heterosis of the leaf vein ratio in tobacco. This study marks the first exploration into the molecular mechanisms governing leaf vein ratio heterosis at the transcriptome level. These findings significantly contribute to understanding leaf vein ratios in tobacco breeding strategies.
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Affiliation(s)
- Lili Duan
- College of Tobacco, Guizhou University, Guiyang, 550025, China
- Key Laboratory for Tobacco Quality Research Guizhou Province, Guizhou University, Guiyang, 550025, China
- College of Agriculture, Guizhou University, Guiyang, 550025, China
| | - Zejun Mo
- College of Tobacco, Guizhou University, Guiyang, 550025, China
- Key Laboratory for Tobacco Quality Research Guizhou Province, Guizhou University, Guiyang, 550025, China
| | - Kuiyin Li
- Anshun University, Anshun, 561099, China
| | - Kai Pi
- College of Tobacco, Guizhou University, Guiyang, 550025, China
- Key Laboratory for Tobacco Quality Research Guizhou Province, Guizhou University, Guiyang, 550025, China
- College of Agriculture, Guizhou University, Guiyang, 550025, China
| | - Jiajun Luo
- College of Tobacco, Guizhou University, Guiyang, 550025, China
- Key Laboratory for Tobacco Quality Research Guizhou Province, Guizhou University, Guiyang, 550025, China
| | - Yuanhui Que
- College of Tobacco, Guizhou University, Guiyang, 550025, China
| | - Qian Zhang
- College of Tobacco, Guizhou University, Guiyang, 550025, China
- Key Laboratory for Tobacco Quality Research Guizhou Province, Guizhou University, Guiyang, 550025, China
| | - Jingyao Zhang
- College of Tobacco, Guizhou University, Guiyang, 550025, China
| | - Guizhi Wu
- College of Tobacco, Guizhou University, Guiyang, 550025, China
| | - Renxiang Liu
- College of Tobacco, Guizhou University, Guiyang, 550025, China.
- Key Laboratory for Tobacco Quality Research Guizhou Province, Guizhou University, Guiyang, 550025, China.
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Kumar J, Saini DK, Kumar A, Kumari S, Gahlaut V, Rahim MS, Pandey AK, Garg M, Roy J. Biofortification of Triticum species: a stepping stone to combat malnutrition. BMC PLANT BIOLOGY 2024; 24:668. [PMID: 39004715 PMCID: PMC11247745 DOI: 10.1186/s12870-024-05161-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 05/16/2024] [Indexed: 07/16/2024]
Abstract
BACKGROUND Biofortification represents a promising and sustainable strategy for mitigating global nutrient deficiencies. However, its successful implementation poses significant challenges. Among staple crops, wheat emerges as a prime candidate to address these nutritional gaps. Wheat biofortification offers a robust approach to enhance wheat cultivars by elevating the micronutrient levels in grains, addressing one of the most crucial global concerns in the present era. MAIN TEXT Biofortification is a promising, but complex avenue, with numerous limitations and challenges to face. Notably, micronutrients such as iron (Fe), zinc (Zn), selenium (Se), and copper (Cu) can significantly impact human health. Improving Fe, Zn, Se, and Cu contents in wheat could be therefore relevant to combat malnutrition. In this review, particular emphasis has been placed on understanding the extent of genetic variability of micronutrients in diverse Triticum species, along with their associated mechanisms of uptake, translocation, accumulation and different classical to advanced approaches for wheat biofortification. CONCLUSIONS By delving into micronutrient variability in Triticum species and their associated mechanisms, this review underscores the potential for targeted wheat biofortification. By integrating various approaches, from conventional breeding to modern biotechnological interventions, the path is paved towards enhancing the nutritional value of this vital crop, promising a brighter and healthier future for global food security and human well-being.
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Affiliation(s)
- Jitendra Kumar
- National Agri-Food Biotechnology Institute (NABI), Mohali-140306, Mohali, Punjab, India.
| | - Dinesh Kumar Saini
- Department of Plant Breeding and Genetics, Punjab Agricultural University, Ludhiana, 141004, India
| | - Ashish Kumar
- National Agri-Food Biotechnology Institute (NABI), Mohali-140306, Mohali, Punjab, India
| | - Supriya Kumari
- University School of Biotechnology, Guru Gobind Singh Indraprastha University, New Delhi, 110078, India
| | - Vijay Gahlaut
- Department of Biotechnology, University Center for Research and Development Chandigarh University, Gharuan, Mohali, Punjab, 140413, India
| | - Mohammed Saba Rahim
- CSIR - Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, 176061, India
| | - Ajay Kumar Pandey
- National Agri-Food Biotechnology Institute (NABI), Mohali-140306, Mohali, Punjab, India
| | - Monika Garg
- National Agri-Food Biotechnology Institute (NABI), Mohali-140306, Mohali, Punjab, India
| | - Joy Roy
- National Agri-Food Biotechnology Institute (NABI), Mohali-140306, Mohali, Punjab, India.
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Chaudhari GR, Patel DA, Parmar DJ, Patel KC, Kumar S. Combining ability, heterosis and performance of grain yield and content of Fe, Zn and protein in bread wheat under normal and late sowing conditions. PeerJ 2023; 11:e14971. [PMID: 36919169 PMCID: PMC10008312 DOI: 10.7717/peerj.14971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 02/07/2023] [Indexed: 03/11/2023] Open
Abstract
Wheat (Triticum aestivum L.) is inherently low in protein content, Zn and Fe. Boost yield gains have unwittingly reduced grain Zn and Fe, which has had negative impacts on human health. The aim of this study was to understand the inheritance of grain yield per plant and grain Fe, Zn, and protein concentrations in bread wheat (Triticum aestivum L.) under normal and late sown conditions. Half diallel crosses were performed using 10 parents. The crosses and parents were evaluated in replicated trials for the two conditions, to assess the possibility of exploiting heterosis to improve micronutrient contents. The per se performance, heterosis, combining ability, and genetic components were estimated for different characters in both environments. The results revealed that hybrid GW 451 × GW 173 exhibited better parent heterosis (BPH) and standard heterotic effects (SH) in all environments. In both sowing conditions, the general combining ability (GCA) effects of poor × poor parents also showed high specific combining ability (SCA) effects of hybrids for both the micronutrients and protein contents. However, σ2A/σ2D greater than unity confirmed the preponderance of additive gene action for protein content, and GW 173 was identified as a good general combiner for these characteristics under both environments. SCA had positive significant (P < 0.001) correlations with BPH, SH1, SH2, and the phenotype for yield component traits and grain protein, Fe, and Zn concentrations in both conditions. A supplementary approach for biofortifying wheat grainis required to prevent malnutrition.
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Affiliation(s)
- Gita R. Chaudhari
- Department of Genetics & Plant Breeding, BACA, Anand Agricultural University, Anand, Gujarat, India
| | - D. A. Patel
- Department of Genetics & Plant Breeding, BACA, Anand Agricultural University, Anand, Gujarat, India
| | - D. J. Parmar
- Department of Statistics, BACA, Anand Agricultural University, Anand, Gujarat, India
| | - K. C. Patel
- Micronutrient Research Centre (ICAR), BACA, Anand Agricultural University, Anand, Gujarat, India
| | - Sushil Kumar
- Department of Agricultural Biotechnology, Anand Agricultural University, Anand, Gujarat, India
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Harnessing the Wild Relatives and Landraces for Fe and Zn Biofortification in Wheat through Genetic Interventions—A Review. SUSTAINABILITY 2021. [DOI: 10.3390/su132312975] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Micronutrient deficiencies, particularly iron (Fe) and zinc (Zn), in human diets are affecting over three billion people globally, especially in developing nations where diet is cereal-based. Wheat is one of several important cereal crops that provide food calories to nearly one-third of the population of the world. However, the bioavailability of Zn and Fe in wheat is inherently low, especially under Zn deficient soils. Although various fortification approaches are available, biofortification, i.e., development of mineral-enriched cultivars, is an efficient and sustainable approach to alleviate malnutrition. There is enormous variability in Fe and Zn in wheat germplasm, especially in wild relatives, but this is not utilized to the full extent. Grain Fe and Zn are quantitatively inherited, but high-heritability and genetic correlation at multiple locations indicate the high stability of Fe and Zn in wheat. In the last decade, pre-breeding activities have explored the potential of wild relatives to develop Fe and Zn rich wheat varieties. Furthermore, recent advances in molecular biology have improved the understanding of the uptake, storage, and bioavailability of Fe and Zn. Various transportation proteins encoding genes like YSL 2, IRT 1, OsNAS 3, VIT 1, and VIT 2 have been identified for Fe and Zn uptake, transfer, and accumulation at different developing stages. Hence, the availability of major genomic regions for Fe and Zn content and genome editing technologies are likely to result in high-yielding Fe and Zn biofortified wheat varieties. This review covers the importance of wheat wild relatives for Fe and Zn biofortification, progress in genomics-assisted breeding, and transgenic breeding for improving Fe and Zn content in wheat.
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Development of a highly efficient ion-ozone cavitation technology for accelerated bread production. Sci Rep 2021; 11:19129. [PMID: 34580334 PMCID: PMC8476621 DOI: 10.1038/s41598-021-98341-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Accepted: 09/06/2021] [Indexed: 11/17/2022] Open
Abstract
The bakery market is one of the most capacious in Kazakhstan. Manufacturers of bread products are in dire need of the introduction of intensive technologies for improving product quality and safety. This article presents the results of research to develop technology for accelerated production of bread with ion-ozone cavitation treatment. The influence of various modes of exposure to ion-ozone cavitation has been investigated. After baking, bread samples were examined for organoleptic, physicochemical, rheological and microbiological indicators. The optimal method is treatment with ion-ozone at a concentration of 0.0025 units/mg, at a pressure of 1.0 atm for 1 min. As a result, it was proved that this mode accelerates the process of obtaining dough and shortens the fermentation time, and baking bread increases the qualitative and quantitative indicators according to the control method. The results showed that the ion-ozone technology reduces the length of the process of making dough and bread by three times compared to traditional technologies. The developed products with existing analogues in the Kazakhstan market will differ due to their high taste and consumer properties, product safety, long shelf life and low cost.
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