1
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Chen S, Li J, Zhu Q, Li Z. Theoretical kinetic studies on intramolecular H-migration reactions of peroxy radicals of diethoxymethane. Phys Chem Chem Phys 2024; 26:24676-24688. [PMID: 39282693 DOI: 10.1039/d4cp02302a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/26/2024]
Abstract
Diethoxymethane (DEM), a promising carbon-neutral fuel, has high reactivity at low temperatures. The intramolecular hydrogen migration reaction of the DEM peroxy radicals can be viewed as a critical step in the low temperature oxidation mechanism of DEM. In this work, multistructural transition state theory (MS-TST) was utilized to calculate the high-pressure limit rate constants of 1,5, 1,6 and 1,7 H-migration reactions for DEM peroxy radicals. In addition to the tunneling effects and anharmonic effects, the intramolecular effects, including steric hindrance, intramolecular hydrogen bonding and conformational changes in reactants and transition states, are also considered in the rate constant calculations. The calculated energy barriers and rate constants demonstrated the substantial impact of intramolecular effects on the kinetics of H-migration reactions in DEM peroxy radicals. Specifically, the distinct configurations of transition states could potentially influence the reaction kinetics. The pressure-dependent rate constants are computed using system-specific quantum RRK theory. The calculated results show that the falloff effect of 1,5 and 1,6 H-migration reactions is more pronounced than that of the 1,7 H-migration reaction. The thermodynamics and kinetics presented in this study could be instrumental in understanding the low-temperature oxidation mechanism of DEM and might prove crucial for future research on comprehensively analyzing the autoignition behavior.
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Affiliation(s)
- Siyu Chen
- College of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China.
| | - Juanqin Li
- College of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China.
| | - Quan Zhu
- College of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China.
- Engineering Research Center of Combustion and Cooling for Aerospace Power, Ministry of Education, Sichuan University, Chengdu, Sichuan 610065, P. R. China
| | - Zerong Li
- College of Chemistry, Sichuan University, Chengdu 610064, P. R. China
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2
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Wu X, Hou Q, Huang J, Chai J, Zhang F. Exploring the OH-initiated reactions of styrene in the atmosphere and the role of van der Waals complex. CHEMOSPHERE 2021; 282:131004. [PMID: 34082313 DOI: 10.1016/j.chemosphere.2021.131004] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Revised: 05/19/2021] [Accepted: 05/23/2021] [Indexed: 06/12/2023]
Abstract
Reacting with OH provides a major sink for styrene in the atmosphere, with three possible pathways including OH-addition, H-abstraction and addition-dissociation reactions. However, the total rate coefficients of styrene + OH were measured as 1.2-6.2 × 10-11 cm3 molecule-1 s-1 under atmospheric conditions, varying by a maximum factor of 5. On the other hand, only one theoretical work reported this rate coefficient as 19.1 × 10-11 cm3 molecule-1 s-1, which exhibits up to 16 times that measured in laboratory studies. In the present study, the reaction kinetics of styrene + OH was extensively studied with high-level quantum chemical methods combined with RRKM/master equation simulations. In particular, we carried out theoretical treatments for the formation of pre-reaction Van der Waals complexes of styrene + OH, and examined their influence on the reaction kinetics. The total rate coefficient for styrene + OH is calculated to be 1.7 × 10-11 cm3 molecule-1 s-1 at 300 K, 1 atm. The main products are addβ (88.2%), add5 (6.9%), addα (1.9%) and add3 (1.7%). Using our computed rate coefficient and the global atmospheric hydroxyl radical concentration (2 × 106 radicals per cm3), the lifetime of styrene in the atmosphere is estimated at 8.0 h. The degradation of styrene might be negligible for the formation of ozone in the atmosphere based upon the photochemical ozone creation potentials calculation. The computed product yields indicate that addβ via subsequent reactions could significantly produce formaldehyde and benzaldehyde that were observed in previous experimental studies on styrene oxidation, and contribute to the formation of secondary organic aerosols.
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Affiliation(s)
- Xiaoqing Wu
- Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui, 230026, PR China; National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui, 230029, PR China
| | - Qifeng Hou
- Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui, 230026, PR China
| | - Jiabin Huang
- Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui, 230026, PR China
| | - Jiajue Chai
- Institute at Brown for Environment and Society, And Department of Earth, Environmental and Planetary Sciences, Brown University, 182 Hope St., Providence, RI, 02912, USA
| | - Feng Zhang
- Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui, 230026, PR China.
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3
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Zhang RM, Xu X, Truhlar DG. Energy Dependence of Ensemble-Averaged Energy Transfer Moments and Its Effect on Competing Decomposition Reactions. J Phys Chem A 2021; 125:6303-6313. [PMID: 34232653 DOI: 10.1021/acs.jpca.1c03845] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We carried out a direct dynamics study on the internal-energy dependence of the ensemble-averaged energy transfer moments of the isobutyl radical in collisions with N2 bath gas. We find a linear dependence of the downward moment ⟨ΔEd⟩ and the root-mean-square moment ⟨ΔE2⟩ on the initial internal energy, but the upward moment ⟨ΔEu⟩ is found to be independent of the molecule's internal energy. We improved the exponential-down relaxation model by including a linear dependence of ⟨ΔEd⟩ on the initial energy, and we used the improved treatment in the 1D master equation for isobutyl radical decomposition reactions and for a model of competitive reactions with a larger difference in barrier heights. We calculated phenomenological rate constants and branching ratios from chemically significant eigenmodes of the master equation and showed that the energy dependence of ⟨ΔEd⟩ has a greater influence on channels with higher barriers in competitive reactions. Rate constants and branching ratios from master equation calculations indicate that for a given temperature and pressure, there is a constant ⟨ΔEd⟩ that can reproduce results obtained with an E-dependent ⟨ΔEd⟩. But a constant ⟨ΔEd⟩ cannot do this for all temperatures and pressures, with larger differences when the barriers for the competing channels differ more. We conclude that when the branching ratio of competitive reactions is sensitive to pressure, including the energy dependence of ⟨ΔEd⟩ in master equation simulations can make a significant difference in the results.
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Affiliation(s)
- Rui Ming Zhang
- Center for Combustion Energy, Department of Energy and Power Engineering, and Key Laboratory for Thermal Science and Power Engineering of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Xuefei Xu
- Center for Combustion Energy, Department of Energy and Power Engineering, and Key Laboratory for Thermal Science and Power Engineering of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
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4
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Matsugi A. Two-Dimensional Master Equation Modeling of Some Multichannel Unimolecular Reactions. J Phys Chem A 2021; 125:2532-2545. [PMID: 33750121 DOI: 10.1021/acs.jpca.1c00666] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Multichannel thermal decomposition reactions of n-propyl radicals, 1-pentyl radicals, and toluene are investigated by solving a two-dimensional master equation formulated as a function of total energy (E) and angular momentum (J). The primary aim of this study is to elucidate the role of angular momentum in the kinetics of multichannel unimolecular reactions. The collisional transition processes of the reactants colliding with argon are characterized based on the classical trajectory calculations and implemented in the master equation. The rate constants calculated by using the two-dimensional master equation are compared with those of one-dimensional master equations. The consequence of the explicit treatment of angular momentum depends on the J dependence of the microscopic rate constants and is particularly emphasized in the thermal decomposition of toluene, for which the C-H and C-C bond fission channels are considered. The centrifugal effect is insignificant in the energetically favored C-H bond fission but is substantial in the energetically higher C-C bond fission, which causes rotational channel switching of the microscopic rate constants. The proper treatment of the J-dependent channel coupling effect, weak collisional transfer of J, and initial-J-dependent collisional energy transfer are found to be essential for predicting the branching fractions at low pressures.
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Affiliation(s)
- Akira Matsugi
- National Institute of Advanced Industrial Science and Technology (AIST), 16-1 Onogawa, Tsukuba, Ibaraki 305-8569, Japan
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5
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Mertens LA, Manion JA. Kinetics of isopropanol decomposition and reaction with H atoms from shock tube experiments and rate constant optimization using the method of uncertainty minimization using polynomial chaos expansions (MUM‐PCE). INT J CHEM KINET 2020. [DOI: 10.1002/kin.21428] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Laura A. Mertens
- Chemical Sciences Division National Institute of Standards and Technology Gaithersburg Maryland
| | - Jeffrey A. Manion
- Chemical Sciences Division National Institute of Standards and Technology Gaithersburg Maryland
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6
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Zhang RM, Xu X, Truhlar DG. Low-Pressure Limit of Competitive Unimolecular Reactions. J Am Chem Soc 2020; 142:16064-16071. [PMID: 32847352 DOI: 10.1021/jacs.0c07692] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
Barker and Ortiz found unusual falloff effects in the flux coefficients of the competitive unimolecular reactions of 2-methylhexyl radicals, and they concluded that this might have important effects on the rate constants of reactions with higher thresholds. To study this effect, we carried out master equation calculations of the same reaction system to learn whether this effect shows up in measurable rate constants, and the answer is yes. We also studied specially designed mechanisms to reveal that the various reactive pathways connecting the reagents can have a large effect on the rate constants, causing them to be quite different than if the reactions proceeded independently, and that reactions with significantly higher barriers may nevertheless have larger rate constants. This provides a new perspective for interpreting and predicting the kinetics of competitive unimolecular reactions.
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Affiliation(s)
- Rui Ming Zhang
- Center for Combustion Energy, Department of Energy and Power Engineering, and Key Laboratory for Thermal Science and Power Engineering of Ministry of Education, Tsinghua University, Beijing 100084, China.,Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Xuefei Xu
- Center for Combustion Energy, Department of Energy and Power Engineering, and Key Laboratory for Thermal Science and Power Engineering of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
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7
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Guo X, Ma F, Liu C, Niu J, He N, Chen J, Xie HB. Atmospheric oxidation mechanism and kinetics of isoprene initiated by chlorine radicals: A computational study. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 712:136330. [PMID: 31931210 DOI: 10.1016/j.scitotenv.2019.136330] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Revised: 12/20/2019] [Accepted: 12/23/2019] [Indexed: 06/10/2023]
Abstract
The reaction with chlorine radicals (·Cl) has been considered to be one of indispensable sinks for isoprene. However, the mechanism of ·Cl initiated isoprene reaction was not fully understood. Herein, the reaction of isoprene with ·Cl, and ensuing reactions of the resulting isoprene relevant radicals were investigated by combined quantum chemistry calculations and kinetics modeling. The results indicate that ·Cl addition to two terminal C-atoms of two double bonds of isoprene, forming IM1-1 and IM1-4, are more favorable than H-abstractions from isoprene. Interestingly, the predicted reaction rate constant for the direct H-abstraction pathway is much lower than that of the indirect one, clarifying a direct H-abstraction mechanism for previously experimental observation. The IM1-1 and IM1-4 have distinct fate in their subsequent transformation. The reaction of IM1-1 ends after the one-time O2 addition. However, IM1-4 can follow auto-oxidation mechanism with two times O2 addition to finally form highly oxidized multi-functional molecules (HOMs), C5H7ClO3 and ·OH. More importantly, the estimated contribution of ·Cl on HOMs (monomer only) formation from isoprene is lower than that of ·OH in addition pathway, implying overall HOMs yield from atmospheric isoprene oxidation could be overestimated if the role of ·Cl in transforming isoprene is ignored.
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Affiliation(s)
- Xirui Guo
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), Dalian University of Technology, Dalian 116024, China
| | - Fangfang Ma
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), Dalian University of Technology, Dalian 116024, China
| | - Cong Liu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), Dalian University of Technology, Dalian 116024, China
| | - Junfeng Niu
- Research Center for Eco-environmental Engineering, Dongguan University of Technology, Dongguan 523808, China
| | - Ning He
- State Key Laboratory of Fine Chemicals & School of Chemical Engineering, Dalian University of Technology, Dalian 116024, China
| | - Jingwen Chen
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), Dalian University of Technology, Dalian 116024, China
| | - Hong-Bin Xie
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), Dalian University of Technology, Dalian 116024, China.
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8
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Experiments on collisional energy transfer. ACTA ACUST UNITED AC 2019. [DOI: 10.1016/b978-0-444-64207-3.00001-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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9
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Monte Carlo stochastic simulation of the master equation for unimolecular reaction systems. ACTA ACUST UNITED AC 2019. [DOI: 10.1016/b978-0-444-64207-3.00007-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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10
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Lei L, Burke MP. Bath Gas Mixture Effects on Multichannel Reactions: Insights and Representations for Systems beyond Single-Channel Reactions. J Phys Chem A 2018; 123:631-649. [DOI: 10.1021/acs.jpca.8b10581] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Lei Lei
- Department of Mechanical Engineering, Columbia University, New York, New York 10027, United States
| | - Michael P. Burke
- Department of Mechanical Engineering, Department of Chemical Engineering, Data Science Institute, Columbia University, New York, New York 10027, United States
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11
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Xing L, Bao JL, Wang Z, Wang X, Truhlar DG. Relative Rates of Hydrogen Shift Isomerizations Depend Strongly on Multiple-Structure Anharmonicity. J Am Chem Soc 2018; 140:17556-17570. [DOI: 10.1021/jacs.8b09381] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Lili Xing
- Energy and Power Engineering Institute, Henan University of Science and Technology, Luoyang, Henan 471003, China
| | - Junwei Lucas Bao
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minnesota 55455-0431, United States
| | - Zhandong Wang
- Clean Combustion Research Center, King Abdullah University of Science and Technology, Thuwal 23955-6900, Saudi Arabia
| | - Xuetao Wang
- Energy and Power Engineering Institute, Henan University of Science and Technology, Luoyang, Henan 471003, China
| | - Donald G. Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minnesota 55455-0431, United States
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12
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Ma F, Ding Z, Elm J, Xie HB, Yu Q, Liu C, Li C, Fu Z, Zhang L, Chen J. Atmospheric Oxidation of Piperazine Initiated by ·Cl: Unexpected High Nitrosamine Yield. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018; 52:9801-9809. [PMID: 30063348 DOI: 10.1021/acs.est.8b02510] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Chlorine radicals (·Cl) initiated amine oxidation plays an important role for the formation of carcinogenic nitrosamine in the atmosphere. Piperazine (PZ) is considered as a potential atmospheric pollutant since it is an alternative solvent to monoethanolamine (MEA), a benchmark solvent in a leading CO2 capture technology. Here, we employed quantum chemical methods and kinetics modeling to investigate ·Cl-initiated atmospheric oxidation of PZ, particularly concerning the potential of PZ to form nitrosamine compared to MEA. Results showed that the ·Cl-initiated PZ reaction exclusively leads to N-center radicals (PZ-N) that mainly react with NO to produce nitrosamine in their further reaction with O2/NO. Together with the PZ + ·OH reaction, the PZ-N yield from PZ oxidation is still lower than that of the corresponding MEA reactions. However, the nitrosamine yield of PZ is higher than the reported value for MEA when [NO] is <5 ppb, a concentration commonly encountered in a polluted urban atmosphere. The unexpected high nitrosamine yield from PZ compared to MEA results from a more favorable reaction of N-center radicals with NO compared to O2. These findings show that the yield of N-center radicals cannot directly be used as a metric for the yield of the corresponding carcinogenic nitrosamine.
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Affiliation(s)
- Fangfang Ma
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
| | - Zhezheng Ding
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
| | - Jonas Elm
- Department of Chemistry and Climate , Aarhus University , Aarhus 8000 , Denmark
| | - Hong-Bin Xie
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
| | - Qi Yu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
| | - Cong Liu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
| | - Chao Li
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of Environment , Northeast Normal University , Changchun 130117 , China
| | - Zhiqiang Fu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
| | - Lili Zhang
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
| | - Jingwen Chen
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology , Dalian University of Technology , Dalian 116024 , China
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13
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dos Santos LP, Baptista L. The effect of carbon-chain oxygenation in the carbon-carbon dissociation. J Mol Model 2018; 24:147. [DOI: 10.1007/s00894-018-3693-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Accepted: 05/23/2018] [Indexed: 12/01/2022]
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14
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Mertens LA, Manion JA. β-Bond Scission and the Yields of H and CH 3 in the Decomposition of Isobutyl Radicals. J Phys Chem A 2018; 122:5418-5436. [PMID: 29738670 DOI: 10.1021/acs.jpca.8b01194] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The relative rates of C-C and C-H β-scission reactions of isobutyl radicals (2-methylprop-1-yl, C4H9) were investigated with shock tube experiments at temperatures of (950 to 1250) K and pressures of (200 to 400) kPa. We produced isobutyl radicals from the decomposition of dilute mixtures of isopentylbenzene and observed the stable decomposition products, propene and isobutene. These alkenes are characteristic of C-C and C-H bond scission, respectively. Propene was the main product, approximately 30 times more abundant than isobutene, indicating that C-C β-scission is the primary pathway. Uncertainty in the ratio of [isobutene]/[propene] from isobutyl decomposition is mainly due to a small amount of side chemistry, which we account for using a kinetics model based on JetSurF 2.0. Our data are well-described after adding chemistry specific to our system and adjusting some rate constants. We compare our data to other commonly used kinetics models: JetSurF 2.0, AramcoMech 2.0, and multiple models from Lawrence Livermore National Laboratory (LLNL). With the kinetics model, we have determined an upper limit of 3.0% on the branching fraction for C-H β-scission in the isobutyl radical for the temperatures and pressures of our experiments. While this agrees with previous high quality experimental results, many combustion kinetics models assume C-H branching values above this upper limit, possibly leading to large systematic inaccuracies in model predictions. Some kinetics models additionally assume contributions from 1,2-H shift reactions-which for isobutyl would produce the same products as C-H β-scission-and our upper limit includes possible involvement of such reactions. We suggest kinetics models should be updated to better reflect current experimental measurements.
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Affiliation(s)
- Laura A Mertens
- Chemical Sciences Division , National Institute of Standards and Technology , Gaithersburg , Maryland 20899-8320 , United States
| | - Jeffrey A Manion
- Chemical Sciences Division , National Institute of Standards and Technology , Gaithersburg , Maryland 20899-8320 , United States
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15
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Lara-Cruz GA, Moyano GE. OCS isomerization and dissociation kinetics from statistical models. Theor Chem Acc 2018. [DOI: 10.1007/s00214-018-2253-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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16
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Kovacevic G, Sabljic A. Atmospheric oxidation of halogenated aromatics: comparative analysis of reaction mechanisms and reaction kinetics. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2017; 19:357-369. [PMID: 28002503 DOI: 10.1039/c6em00577b] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Atmospheric transport is the major route for global distribution of semi-volatile compounds such as halogenated aromatics as well as their major exposure route for humans. Their major atmospheric removal process is oxidation by hydroxyl radicals. There is very little information on the reaction mechanism or reaction-path dynamics of atmospheric degradation of halogenated benzenes. Furthermore, the measured reaction rate constants are missing for the range of environmentally relevant temperatures, i.e. 230-330 K. A series of recent theoretical studies have provided those valuable missing information for fluorobenzene, chlorobenzene, hexafluorobenzene and hexachlorobenzene. Their comparative analysis has provided additional and more general insight into the mechanism of those important tropospheric degradation processes as well as into the mobility, transport and atmospheric fate of halogenated aromatic systems. It was demonstrated for the first time that the addition of hydroxyl radicals to monohalogenated as well as to perhalogenated benzenes proceeds indirectly, via a prereaction complex and its formation and dynamics have been characterized including the respective transition-state. However, in fluorobenzene and chlorobenzene reactions hydroxyl radical hydrogen is pointing approximately to the center of the aromatic ring while in the case of hexafluorobenzene and hexachlorobenzene, unexpectedly, the oxygen is directed towards the center of the aromatic ring. The reliable rate constants are now available for all environmentally relevant temperatures for the tropospheric oxidation of fluorobenzene, chlorobenzene, hexafluorobenzene and hexachlorobenzene while pentachlorophenol, a well-known organic micropollutant, seems to be a major stable product of tropospheric oxidation of hexachlorobenzene. Their calculated tropospheric lifetimes show that fluorobenzene and chlorobenzene are easily removed from the atmosphere and do not have long-range transport potential while hexafluorobenzene seems to be a potential POP chemical and hexachlorobenzene is clearly a typical persistent organic pollutant.
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Affiliation(s)
- Goran Kovacevic
- Rudjer Boskovic Institute, Division of Physical Chemistry, POB 180, HR-10002 Zagreb, Republic of Croatia.
| | - Aleksandar Sabljic
- Rudjer Boskovic Institute, Division of Physical Chemistry, POB 180, HR-10002 Zagreb, Republic of Croatia.
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17
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Yu Q, Xie HB, Li T, Ma F, Fu Z, Wang Z, Li C, Fu Z, Xia D, Chen J. Atmospheric chemical reaction mechanism and kinetics of 1,2-bis(2,4,6-tribromophenoxy)ethane initiated by OH radical: a computational study. RSC Adv 2017. [DOI: 10.1039/c6ra26700a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The mechanism and kinetics of OH-initiated oxidation of BTBPE, an alternative of PBDEs, were investigated.
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18
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Bao JL, Truhlar DG. Variational transition state theory: theoretical framework and recent developments. Chem Soc Rev 2017; 46:7548-7596. [DOI: 10.1039/c7cs00602k] [Citation(s) in RCA: 207] [Impact Index Per Article: 29.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
This article reviews the fundamentals of variational transition state theory (VTST), its recent theoretical development, and some modern applications.
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Affiliation(s)
- Junwei Lucas Bao
- Department of Chemistry
- Chemical Theory Center, and Minnesota Supercomputing Institute
- University of Minnesota
- Minneapolis
- USA
| | - Donald G. Truhlar
- Department of Chemistry
- Chemical Theory Center, and Minnesota Supercomputing Institute
- University of Minnesota
- Minneapolis
- USA
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19
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Yu Q, Xie HB, Chen J. Atmospheric chemical reactions of alternatives of polybrominated diphenyl ethers initiated by OH: A case study on triphenyl phosphate. THE SCIENCE OF THE TOTAL ENVIRONMENT 2016; 571:1105-1114. [PMID: 27457671 DOI: 10.1016/j.scitotenv.2016.07.105] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2016] [Revised: 07/13/2016] [Accepted: 07/15/2016] [Indexed: 06/06/2023]
Abstract
Many studies have been performed to evaluate the environmental risk caused by alternative flame retardants (AFRs) of polybrominated diphenyl ethers due to their ubiquitous occurrence in the environment. However, as an indispensable component of the environmental risk assessment, the information on atmospheric fate of AFRs is limited although some AFRs have been frequently and highly detected in the atmosphere. Here, a combined quantum chemical method and kinetics modeling were used to investigate atmospheric transformation mechanism and kinetics of AFRs initiated by OH in the presence of O2, taking triphenyl phosphate (TPhP) as a case. Results show that the pathway involving initial OH addition to phenyl of TPhP to form TPhP-OH adduct, and subsequent reaction of the TPhP-OH adduct with O2 to finally form phenol phosphate, is the most favorable for the titled reaction. The calculated overall reaction rate constant is 1.6×10(-12)cm(3) molecule(-1)s(-1), translating 7.6days atmospheric lifetime of TPhP. This clarifies that gaseous TPhP has atmospheric persistence. In addition, it was found that ice surface, as a case of ubiquitous water in the atmosphere, has little effect on the kinetics of the rate-determining step in the OH-initiated TPhP reaction.
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Affiliation(s)
- Qi Yu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Hong-Bin Xie
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China.
| | - Jingwen Chen
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
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Kovacevic G, Sabljic A. Atmospheric oxidation of hexachlorobenzene: New global source of pentachlorophenol. CHEMOSPHERE 2016; 159:488-495. [PMID: 27341152 DOI: 10.1016/j.chemosphere.2016.06.026] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Revised: 06/01/2016] [Accepted: 06/06/2016] [Indexed: 06/06/2023]
Abstract
Hexachlorobenzene is highly persistent, bioaccumulative, toxic and globally distributed, a model persistent organic pollutant. The major atmospheric removal process for hexachlorobenzene is its oxidation by hydroxyl radicals. Unfortunately, there is no information on the reaction mechanism of this important atmospheric process and the respective degradation rates were measured in a narrow temperature range not of environmental relevance. Thus, the geometries and energies of all stationary points significant for the atmospheric oxidation of hexachlorobenzene are optimized using MP2/6-311G(d,p) method. Furthermore, the single point energies were calculated with G3 method on the optimized minima and transition-states. It was demonstrated for the first time that the addition of hydroxyl radicals to hexachlorobenzene proceeds indirectly, via a prereaction complex. In the prereaction complex the hydroxyl radical is almost perpendicular to the aromatic ring while oxygen is pointing to its center. In contrast, in the transition state it is nearly parallel with the aromatic ring. The reliable rate constants are calculated for the first time for the atmospheric oxidation of hexachlorobenzene for all environmentally relevant temperatures. It was also demonstrated for the first time that pentachlorophenol is the major stable product in the addition of hydroxyl radicals to hexachlorobenzene and that atmosphere seems to be a new global secondary source of pentachlorophenol.
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Affiliation(s)
- Goran Kovacevic
- Rudjer Boskovic Institute, Division of Physical Chemistry, POB 180, HR-10002 Zagreb, Croatia
| | - Aleksandar Sabljic
- Rudjer Boskovic Institute, Division of Physical Chemistry, POB 180, HR-10002 Zagreb, Croatia.
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21
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Xie HB, Ma F, Wang Y, He N, Yu Q, Chen J. Quantum Chemical Study on ·Cl-Initiated Atmospheric Degradation of Monoethanolamine. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2015; 49:13246-55. [PMID: 26495768 DOI: 10.1021/acs.est.5b03324] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Recent findings on the formation of ·Cl in continental urban areas necessitate the consideration of ·Cl initiated degradation when assessing the fate of volatile organic pollutants. Monoethanolamine (MEA) is considered as a potential atmospheric pollutant since it is a benchmark and widely utilized solvent in a leading CO2 capture technology. Especially, ·Cl may have specific interactions with the N atom of MEA, which could make the MEA + ·Cl reaction have different pathways and products from those of the MEA + ·OH reaction. Hence, ·Cl initiated reactions with MEA were investigated by a quantum chemical method [CCSD(T)/aug-cc-pVTZ//MP2/6-31+G(3df,2p)] and kinetics modeling. Results show that the overall rate constant for ·Cl initiated H-abstraction of MEA is 5 times faster than that initiated by ·OH, and the tropospheric lifetimes of MEA will be overestimated by 6-46% when assuming that [·Cl]/[·OH] = 1-10% if the role of ·Cl is ignored. The MEA + ·Cl reaction exclusively produces MEA-N that finally transforms into several products including mutagenic nitramine and carcinogenic nitrosamine via further reactions with O2/NOx, and the contribution of ·Cl to their formation is about 25-250% of that of ·OH. Thus, it is necessary to consider ·Cl initiated tropospheric degradation of MEA for its risk assessment.
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Affiliation(s)
- Hong-Bin Xie
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology , Dalian 116024, China
| | - Fangfang Ma
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology , Dalian 116024, China
| | - Yuanfang Wang
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology , Dalian 116024, China
| | - Ning He
- State Key Laboratory of Fine Chemicals, Dalian University of Technology , Dalian 116024, China
| | - Qi Yu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology , Dalian 116024, China
| | - Jingwen Chen
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology , Dalian 116024, China
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22
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Yang L, Sonk JA, Barker JR. HO + OClO Reaction System: Featuring a Barrierless Entrance Channel with Two Transition States. J Phys Chem A 2015; 119:5723-31. [DOI: 10.1021/acs.jpca.5b03487] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Lei Yang
- Department of Atmospheric,
Oceanic, and Space Sciences, University of Michigan, Ann Arbor, Michigan 48109-2143, United States
| | - Jason A. Sonk
- Department of Atmospheric,
Oceanic, and Space Sciences, University of Michigan, Ann Arbor, Michigan 48109-2143, United States
| | - John R. Barker
- Department of Atmospheric,
Oceanic, and Space Sciences, University of Michigan, Ann Arbor, Michigan 48109-2143, United States
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Affiliation(s)
- John R. Barker
- Department
of Atmospheric, Oceanic and Space Sciences, University of Michigan, Ann Arbor, Michigan 48109-2143, United States
| | - Michael Frenklach
- Department
of Mechanical Engineering, University of California—Berkeley, Berkeley, California 94720-1740, United States
| | - David M. Golden
- Department
of Mechanical Engineering, Stanford University, Stanford, California 94305-3032, United States
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24
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Somers KP, Simmie JM, Metcalfe WK, Curran HJ. The pyrolysis of 2-methylfuran: a quantum chemical, statistical rate theory and kinetic modelling study. Phys Chem Chem Phys 2014; 16:5349-67. [PMID: 24496403 DOI: 10.1039/c3cp54915a] [Citation(s) in RCA: 94] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Due to the rapidly growing interest in the use of biomass derived furanic compounds as potential platform chemicals and fossil fuel replacements, there is a simultaneous need to understand the pyrolysis and combustion properties of such molecules. To this end, the potential energy surfaces for the pyrolysis relevant reactions of the biofuel candidate 2-methylfuran have been characterized using quantum chemical methods (CBS-QB3, CBS-APNO and G3). Canonical transition state theory is employed to determine the high-pressure limiting kinetics, k(T), of elementary reactions. Rice-Ramsperger-Kassel-Marcus theory with an energy grained master equation is used to compute pressure-dependent rate constants, k(T,p), and product branching fractions for the multiple-well, multiple-channel reaction pathways which typify the pyrolysis reactions of the title species. The unimolecular decomposition of 2-methylfuran is shown to proceed via hydrogen atom transfer reactions through singlet carbene intermediates which readily undergo ring opening to form collisionally stabilised acyclic C5H6O isomers before further decomposition to C1-C4 species. Rate constants for abstraction by the hydrogen atom and methyl radical are reported, with abstraction from the alkyl side chain calculated to dominate. The fate of the primary abstraction product, 2-furanylmethyl radical, is shown to be thermal decomposition to the n-butadienyl radical and carbon monoxide through a series of ring opening and hydrogen atom transfer reactions. The dominant bimolecular products of hydrogen atom addition reactions are found to be furan and methyl radical, 1-butene-1-yl radical and carbon monoxide and vinyl ketene and methyl radical. A kinetic mechanism is assembled with computer simulations in good agreement with shock tube speciation profiles taken from the literature. The kinetic mechanism developed herein can be used in future chemical kinetic modelling studies on the pyrolysis and oxidation of 2-methylfuran, or the larger molecular structures for which it is a known pyrolysis/combustion intermediate (e.g. cellulose, coals, 2,5-dimethylfuran).
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Affiliation(s)
- Kieran P Somers
- Combustion Chemistry Centre, National University of Ireland, Galway, Republic of Ireland.
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25
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Kovacevic G, Sabljic A. Mechanisms and reaction-path dynamics of hydroxyl radical reactions with aromatic hydrocarbons: the case of chlorobenzene. CHEMOSPHERE 2013; 92:851-856. [PMID: 23694732 DOI: 10.1016/j.chemosphere.2013.04.041] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2012] [Revised: 02/22/2013] [Accepted: 04/15/2013] [Indexed: 06/02/2023]
Abstract
All geometries and energies significant for the first step of tropospheric degradation of chlorobenzene were characterized using the MP2/6-31+G(d,p) and G3 methods. A pre-reaction complex for the addition of OH radical to chlorobenzene was found and the associated transition state was determined for the first time. The reaction path for the association of OH radical and chlorobenzene into the pre-reaction complex was extrapolated from the selected low frequency normal mode of pre-reaction complex. The reaction rate constant for addition of OH radical to chlorobenzene was determined for the temperature range 230-330K, using RRKM theory and G3 energies. The calculated rate constants are in agreement with the experimental results. Regioselectivity was also determined for the title reaction from the ratio of respective reaction rates and our results are in very good agreement with the experimental results, which show the dominance of the ortho and para channels as well as a negligible contribution by the ipso channel.
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Affiliation(s)
- Goran Kovacevic
- Institute Rudjer Boskovic, POB 180, HR-10002 Zagreb, Croatia
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26
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27
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Miller JA, Klippenstein SJ. Determining phenomenological rate coefficients from a time-dependent, multiple-well master equation: “species reduction” at high temperatures. Phys Chem Chem Phys 2013; 15:4744-53. [DOI: 10.1039/c3cp44337j] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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28
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29
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Kovacevic G, Sabljic A. Theoretical study on the mechanism and kinetics of addition of hydroxyl radicals to fluorobenzene. J Comput Chem 2012; 34:646-55. [DOI: 10.1002/jcc.23175] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2012] [Revised: 10/11/2012] [Accepted: 10/15/2012] [Indexed: 01/27/2023]
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30
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Kjaergaard HG, Knap HC, Ørnsø KB, Jørgensen S, Crounse JD, Paulot F, Wennberg PO. Atmospheric fate of methacrolein. 2. Formation of lactone and implications for organic aerosol production. J Phys Chem A 2012; 116:5763-8. [PMID: 22452294 DOI: 10.1021/jp210853h] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We investigate the oxidation of methacryloylperoxy nitrate (MPAN) and methacrylicperoxy acid (MPAA) by the hydroxyl radical (OH) theoretically, using both density functional theory [B3LYP] and explicitly correlated coupled cluster theory [CCSD(T)-F12]. These two compounds are produced following the abstraction of a hydrogen atom from methacrolein (MACR) by the OH radical. We use a RRKM master equation analysis to estimate that the oxidation of MPAN leads to formation of hydroxymethyl-methyl-α-lactone (HMML) in high yield. HMML production follows a low potential energy path from both MPAN and MPAA following addition of OH (via elimination of the NO(3) and OH from MPAN and MPAA, respectively). We suggest that the subsequent heterogeneous phase chemistry of HMML may be the route to formation of 2-methylglyceric acid, a common component of organic aerosol produced in the oxidation of methacrolein. Oxidation of acrolein, a photo-oxidation product from 1,3-butadiene, is found to follow a similar route generating hydroxymethyl-α-lactone (HML).
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Affiliation(s)
- Henrik G Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark.
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31
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Carstensen HH, Dean AM. A quantitative kinetic analysis of CO elimination from phenoxy radicals. INT J CHEM KINET 2011. [DOI: 10.1002/kin.20622] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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32
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Davis AC, Francisco JS. Ab Initio Study of Key Branching Reactions in Biodiesel and Fischer–Tropsch Fuels. J Am Chem Soc 2011; 133:19110-24. [DOI: 10.1021/ja205516s] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Alexander C Davis
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-1393, USA
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33
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Buendía-Atencio C, Cobos CJ. Theoretical study of the thermochemistry and the kinetics of the SF Cl (x= 0–5) series. J Fluor Chem 2011. [DOI: 10.1016/j.jfluchem.2011.04.020] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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34
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35
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Awan IA, McGivern WS, Tsang W, Manion JA. Decomposition and Isomerization of 5-Methylhex-1-yl Radical. J Phys Chem A 2010; 114:7832-46. [DOI: 10.1021/jp102313p] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Iftikhar A. Awan
- National Institute of Standards and Technology, Chemical and Biochemical Reference Data, Gaithersburg, Maryland 20899-8320
| | - W. Sean McGivern
- National Institute of Standards and Technology, Chemical and Biochemical Reference Data, Gaithersburg, Maryland 20899-8320
| | - Wing Tsang
- National Institute of Standards and Technology, Chemical and Biochemical Reference Data, Gaithersburg, Maryland 20899-8320
| | - Jeffrey A. Manion
- National Institute of Standards and Technology, Chemical and Biochemical Reference Data, Gaithersburg, Maryland 20899-8320
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36
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Viskolcz B, Seres L. Ab initio study on alkyl radical decomposition and alkyl radical addition to olefins. ACTA ACUST UNITED AC 2009. [DOI: 10.1007/s11144-009-5524-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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37
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Hayes CJ, Merle JK, Hadad CM. The chemistry of reactive radical intermediates in combustion and the atmosphere. ADVANCES IN PHYSICAL ORGANIC CHEMISTRY 2009. [DOI: 10.1016/s0065-3160(08)00003-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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38
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Somnitz H, Ufer T, Zellner R. Acetone photolysis at 248 nm revisited: pressure dependence of the CO and CO2 quantum yields. Phys Chem Chem Phys 2009; 11:8522-31. [DOI: 10.1039/b906751e] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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39
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Huang Y, Peterman S, Tichy SE, North SW, Russell DH. Unimolecular Dissociation Reactions of Methyl Benzoate Radical Cation. J Phys Chem A 2008; 112:11590-7. [DOI: 10.1021/jp7108048] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Yiqun Huang
- Department of Chemistry, The Laboratory for Biological Mass Spectrometry, Texas A&M University, College Station, Texas 77842
| | - Scott Peterman
- Department of Chemistry, The Laboratory for Biological Mass Spectrometry, Texas A&M University, College Station, Texas 77842
| | - Shane E. Tichy
- Department of Chemistry, The Laboratory for Biological Mass Spectrometry, Texas A&M University, College Station, Texas 77842
| | - Simon W. North
- Department of Chemistry, The Laboratory for Biological Mass Spectrometry, Texas A&M University, College Station, Texas 77842
| | - David H. Russell
- Department of Chemistry, The Laboratory for Biological Mass Spectrometry, Texas A&M University, College Station, Texas 77842
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40
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Kuwata KT, Valin LC, Converse AD. Quantum chemical and master equation studies of the methyl vinyl carbonyl oxides formed in isoprene ozonolysis. J Phys Chem A 2007; 109:10710-25. [PMID: 16863120 DOI: 10.1021/jp054346d] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Methyl vinyl carbonyl oxide is an important intermediate in the reaction of isoprene and ozone and may be responsible for most of the (*)OH formed in isoprene ozonolysis. We use CBS-QB3 calculations and RRKM/master equation simulations to characterize all the pathways leading to the formation of this species, all the interconversions among its four possible conformers, and all of its irreversible isomerizations. Our calculations, like previous studies, predict (*)OH yields consistent with experiment if thermalized syn-methyl carbonyl oxides form (*)OH quantitatively. Natural bond order analysis reveals that the vinyl group weakens the C=O bond of the carbonyl oxide, making rotation about this bond accessible to this chemically activated intermediate. The vinyl group also allows one conformer of the carbonyl oxide to undergo electrocyclization to form a dioxole, a species not previously considered in the literature. Dioxole formation, which has a CBS-QB3 reaction barrier of 13.9 kcal/mol, is predicted to be favored over vinyl hydroperoxide formation, dioxirane formation, and collisional stabilization. Our calculations also predict that two dioxole derivatives, 1,2-epoxy-3-butanone and 3-oxobutanal, should be major products of isoprene ozonolysis.
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Affiliation(s)
- Keith T Kuwata
- Department of Chemistry, Macalester College, Saint Paul, Minnesota 55105-1899, USA.
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41
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Fernandez-Ramos A, Miller JA, Klippenstein SJ, Truhlar DG. Modeling the kinetics of bimolecular reactions. Chem Rev 2007; 106:4518-84. [PMID: 17091928 DOI: 10.1021/cr050205w] [Citation(s) in RCA: 393] [Impact Index Per Article: 23.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Antonio Fernandez-Ramos
- Departamento de Quimica Fisica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
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42
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Carstensen HH, Dean AM. Chapter 4 The Kinetics of Pressure-Dependent Reactions. MODELING OF CHEMICAL REACTIONS 2007. [DOI: 10.1016/s0069-8040(07)42004-0] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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43
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Maranzana A, Barker JR, Tonachini G. Master equation simulations of competing unimolecular and bimolecular reactions: application to OH production in the reaction of acetyl radical with O2. Phys Chem Chem Phys 2007; 9:4129-41. [PMID: 17687463 DOI: 10.1039/b705116f] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Master equation calculations were carried out to simulate the production of hydroxyl free radicals initiated by the reaction of acetyl free radicals (CH3(C=O).) with molecular oxygen. In particular, the competition between the unimolecular reactions and bimolecular reactions of vibrationally excited intermediates was modeled by using a single master equation. The vibrationally excited intermediates (isomers of acetylperoxyl radicals) result from the initial reaction of acetyl free radical with O2. The bimolecular reactions were modeled using a novel pseudo-first-order microcanonical rate constant approach. Stationary points on the multi-well, multi-channel potential energy surface (PES) were calculated at the DFT(B3LYP)/6-311G(2df,p) level of theory. Some additional calculations were carried out at the CASPT2(7,5)/6-31G(d) level of theory to investigate barrierless reactions and other features of the PES. The master equation simulations are in excellent agreement with the experimental OH yields measured in N2 or He buffer gas near 300 K, but they do not explain a recent report that the OH yields are independent of pressure in nearly pure O2 buffer gas.
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Affiliation(s)
- Andrea Maranzana
- Department of Atmospheric, Oceanic and Space Sciences, University of Michigan, 2455 Hayward Street, Ann Arbor, MI 48109-2143, USA
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44
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Poutsma ML. Evaluation of the Kinetic Data for Intramolecular 1,x-Hydrogen Shifts in Alkyl Radicals and Structure/Reactivity Predictions from the Carbocyclic Model for the Transition State. J Org Chem 2006; 72:150-61. [PMID: 17194094 DOI: 10.1021/jo061815e] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Experimental and computational kinetic data for the intramolecular 1,x-hydrogen shift in alkyl radicals are compiled in Arrhenius format for x = 2-5. Significant experimental disparity remains, especially for x = 2 and 3. Experimental data for radicals with tert centers or bearing spectator substituents are lacking for all x, and none exist for x = 6. The common use of the strain energy of the unsubstituted (x+1)-carbocycle to coarsely model the activation energy for the 1,x-shift is extended to explore more subtle differences in progressively methyl-substituted systems by use of molecular mechanics estimates of differences in strain between radicals and carbocycles. For x = 5 and 6, a sterically driven increase in E is predicted for shifts in the tert --> tert class that apparently runs counter to the behavior of bimolecular hydrogen transfers. In contrast, a sterically driven decrease in E is predicted to result from spectator methyl groups for the prim --> prim reaction class for all x. There is no experimental basis to test these predictions; fragmentary computational evidence lends some support to the second but is ambiguous concerning the first. Possible deficiencies in the use of carbocycles as transition state models are discussed.
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Affiliation(s)
- Marvin L Poutsma
- Chemical Sciences Division, Oak Ridge National Laboratory, PO Box 2008, Oak Ridge, Tennessee 37831-6197, USA.
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45
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Hasson AS, Kuwata KT, Arroyo MC, Petersen EB. Theoretical studies of the reaction of hydroperoxy radicals (HO2) with ethyl peroxy (CH3CH2O2), acetyl peroxy (CH3C(O)O2), and acetonyl peroxy (CH3C(O)CH2O2) radicals. J Photochem Photobiol A Chem 2005. [DOI: 10.1016/j.jphotochem.2005.08.012] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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46
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Tasić US, Parmenter CS. Test of a chemical timing method for measuring absolute vibrational relaxation rate constants for S1 p-difluorobenzene. J Phys Chem B 2005; 109:8297-303. [PMID: 16851972 DOI: 10.1021/jp040396r] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A chemical timing (CT) method for measuring absolute rate constants for collisional vibrational relaxation has been tested for the 5(1) state of S(1) p-difluorobenzene (pDFB) where an alternative method exists to provide benchmark values. The CT method was originally developed to treat vibrational energy transfer (VET) in large molecules excited to high vibrational levels where the intramolecular vibrational redistribution (IVR) resulting from large vibrational state densities completely eliminates vibrational structure in the emission spectrum. Here we apply the same method to a low-lying state (5(1) with epsilon(vib) = 818 cm(-1)) located in the low-density region of the vibrational manifold where IVR plays no role. For high vibrational levels, the chemical timing method involves addition of high O(2) pressures (kTorr) to a low-pressure pDFB sample, introducing vibrational structure in the fluorescence spectrum. Response of this spectrum to vibrational relaxation by Ar is then examined. For levels such as 5(1), the fully structured fluorescence spectrum allows the rate constant for single-collision VET into the surrounding vibrational field to be measured directly without the presence of O(2). The measurements of 5(1) VET have been repeated with various O(2) pressures (kTorr) for comparison with the O(2)-free benchmark. In the presence of O(2), the rate constant for VET by Ar is (4.0 +/- 0.5) x 10(6) Torr(-1) s(-1) and independent of high O(2) pressure variations. The rate constant as found by the standard O(2)-free method is (3.6 +/- 0.4) x 10(6) Torr(-1) s(-1). This comparison suggests that the chemical timing method is capable of providing a reasonably accurate measure of the VET rate constant for high vibrational levels provided that details of the kinetics are known.
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Affiliation(s)
- Uros S Tasić
- Department of Chemistry, Indiana University, Bloomington, Indiana 47405, USA
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47
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Kuwata KT, Hasson AS, Dickinson RV, Petersen EB, Valin LC. Quantum Chemical and Master Equation Simulations of the Oxidation and Isomerization of Vinoxy Radicals. J Phys Chem A 2005; 109:2514-24. [PMID: 16833553 DOI: 10.1021/jp047299i] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The vinoxy radical, a common intermediate in gas-phase alkene ozonolysis, reacts with O2 to form a chemically activated alpha-oxoperoxy species. We report CBS-QB3 energetics for O2 addition to the parent (*CH2CHO, 1a), 1-methylvinoxy (*CH2COCH3, 1b), and 2-methylvinoxy (CH3*CHCHO, 1c) radicals. CBS-QB3 predictions for peroxy radical formation agree with experimental data, while the G2 method systematically overestimates peroxy radical stability. RRKM/master equation simulations based on CBS-QB3 data are used to estimate the competition between prompt isomerization and thermalization for the peroxy radicals derived from 1a, 1b, and 1c. The lowest energy isomerization pathway for radicals 4a and 4c (derived from 1a and 1c, respectively) is a 1,4-shift of the acyl hydrogen requiring 19-20 kcal/mol. The resulting hydroperoxyacyl radical decomposes quantitatively to form *OH. The lowest energy isomerization pathway for radical 4b (derived from 1b) is a 1,5-shift of a methyl hydrogen requiring 26 kcal/mol. About 25% of 4a, but only approximately 5% of 4c, isomerizes promptly at 1 atm pressure. Isomerization of 4b is negligible at all pressures studied.
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Affiliation(s)
- Keith T Kuwata
- Department of Chemistry, Macalester College, Saint Paul, Minnesota 55105-1899, USA.
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Fockenberg C, Weston RE, Muckerman JT. Product Study of the Reaction of CH3 with OH Radicals at Low Pressures and Temperatures of 300 and 612 K†. J Phys Chem B 2005; 109:8415-27. [PMID: 16851988 DOI: 10.1021/jp045792o] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The product distribution for the title reaction was studied using our time-of-flight mass spectrometer (TOFMS) connected to a tubular flow reactor. The methyl and hydroxyl radicals were produced by an excimer laser pulse (lambda = 193 nm) photolyzing acetone and nitrous oxide in the presence of excess water or hydrogen. Helium was used as the bath gas; the total density was held constant at 1.2 x 10(17) cm(-3). At 300 K the observations were consistent with singlet methylene ((1)CH(2)) and water as the main product channel with a small contribution of methanol. In contrast, at about 610 K three channels-formaldehyde isomers and methanol in addition to (1)CH(2) + H(2)O-are formed with similar yields. When acetone-d(6) was used, the production of both CHDO and CD(2)O was observed, indicating that two different formaldehyde-producing channels are operating simultaneously. These experimental results are compared with RRKM and master equation calculations on the basis of the properties of the methanol potential energy surface from a recent ab initio study.
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Affiliation(s)
- Christopher Fockenberg
- Chemistry Department 555A, Brookhaven National Laboratory, P. O. Box 5000, Upton, New York 11973-5000, USA
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Joshi AV, Wang H. Master equation modeling of wide range temperature and pressure dependence of CO + OH → products. INT J CHEM KINET 2005. [DOI: 10.1002/kin.20137] [Citation(s) in RCA: 98] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Somnitz H, Fida M, Ufer T, Zellner R. Pressure dependence for the CO quantum yield in the photolysis of acetone at 248 nm: A combined experimental and theoretical study. Phys Chem Chem Phys 2005; 7:3342-52. [PMID: 16240049 DOI: 10.1039/b506738c] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The quantum yield of CO in the laser pulse photolysis of acetone at 248 nm and at 298 K in the pressure range 20-900 mbar (N2) has been measured directly using quantitative infrared diode laser absorption of CO. It is found that the quantum yield of CO shows a significant dependence on total pressure with Phi(CO) decreasing with pressure from around 0.45 at 20 mbar to approximately 0.25 at 900 mbar. From a combination of ab initio quantum chemical calculations on the molecular properties of the acetyl (CH3CO) radical and its unimolecular fragmentation as well as the application of statistical (RRKM) and dynamical calculations we show that CO production results from prompt secondary fragmentation (via(2a)) of the internally excited primary CH3CO* photolysis product with an excess energy of approximately 62.8 kJ mol(-1). Hence, our findings are consistent with a consecutive photochemically induced decomposition model, viz. step (1): CH3COCH3+hv--> CH3CO*+ CH3, step (2a): CH3CO*--> CH3+ CO or step (2b) CH3CO*-(+M)--> CH3CO. Formation of CO via a direct and/or concerted channel CH3COCH3+hv--> 2CH(3)+ CO (1') is considered to be unimportant.
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Affiliation(s)
- H Somnitz
- Institute of Physical and Theoretical Chemistry, University of Duisburg, Essen, D-45117, Essen, Germany.
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