1
|
Chang Y, Zhang J, Pham HA, Lyu J, Li Z. Interpretable Dimension Reduction for MRI Channel Suppression. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2022; 2022:1456-1459. [PMID: 36085960 DOI: 10.1109/embc48229.2022.9871474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Channel suppression can reduce the redundant information in multiple channel receiver coils and accelerate reconstruction speed to meet real-time imaging requirements. The principal component analysis has been used for channel suppression, but it is difficult to be interpreted because all channels contribute to principal components. Furthermore, the importance of interpretability in machine learning has recently attracted increasing attention in radiology. To improve the interpretability of PCA-based channel suppression, a sparse PCA method is proposed to reduce the most coils' loadings to be zero. Channel suppression is formulated as solving a nonlinear eigenvalue problem using the inverse power method instead of the direct matrix decomposition. Experimental results of in vivo data show that the sparse PCA-based channel suppression not only improves the interpretability with sparse channels, but also improves reconstruction quality compared to the standard PCA-based reconstruction with the similar reconstruction time.
Collapse
|
2
|
Nayak KS, Lim Y, Campbell-Washburn AE, Steeden J. Real-Time Magnetic Resonance Imaging. J Magn Reson Imaging 2022; 55:81-99. [PMID: 33295674 PMCID: PMC8435094 DOI: 10.1002/jmri.27411] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Revised: 10/06/2020] [Accepted: 10/09/2020] [Indexed: 01/03/2023] Open
Abstract
Real-time magnetic resonance imaging (RT-MRI) allows for imaging dynamic processes as they occur, without relying on any repetition or synchronization. This is made possible by modern MRI technology such as fast-switching gradients and parallel imaging. It is compatible with many (but not all) MRI sequences, including spoiled gradient echo, balanced steady-state free precession, and single-shot rapid acquisition with relaxation enhancement. RT-MRI has earned an important role in both diagnostic imaging and image guidance of invasive procedures. Its unique diagnostic value is prominent in areas of the body that undergo substantial and often irregular motion, such as the heart, gastrointestinal system, upper airway vocal tract, and joints. Its value in interventional procedure guidance is prominent for procedures that require multiple forms of soft-tissue contrast, as well as flow information. In this review, we discuss the history of RT-MRI, fundamental tradeoffs, enabling technology, established applications, and current trends. LEVEL OF EVIDENCE: 5 TECHNICAL EFFICACY STAGE: 1.
Collapse
Affiliation(s)
- Krishna S. Nayak
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California, USA,Address reprint requests to: K.S.N., 3740 McClintock Ave, EEB 400C, Los Angeles, CA 90089-2564, USA.
| | - Yongwan Lim
- Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, California, USA
| | - Adrienne E. Campbell-Washburn
- Cardiovascular Branch, Division of Intramural Research, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, Maryland, USA
| | - Jennifer Steeden
- Institute of Cardiovascular Science, Centre for Cardiovascular Imaging, University College London, London, UK
| |
Collapse
|
3
|
Bock M, Traser L, Caglar Özen A, Burdumy M, Richter B, Echternach M. Reply to Letter to the Editor: "Nomenclature for real-time magnetic resonance imaging". Magn Reson Med 2018; 81:1485. [PMID: 30450633 DOI: 10.1002/mrm.27599] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Accepted: 10/17/2018] [Indexed: 12/29/2022]
Affiliation(s)
- Michael Bock
- Dept. of Radiology, Medical Physics, Medical Center - University of Freiburg, Germany.,Faculty of Medicine, University of Freiburg, Germany
| | - Louisa Traser
- Faculty of Medicine, University of Freiburg, Germany.,Institute of Musicians' Medicine, Medical Center - University of Freiburg, Germany.,Department of Otolaryngology, Medical Center - University of Freiburg, Germany
| | - Ali Caglar Özen
- Dept. of Radiology, Medical Physics, Medical Center - University of Freiburg, Germany.,Faculty of Medicine, University of Freiburg, Germany
| | - Michael Burdumy
- Dept. of Radiology, Medical Physics, Medical Center - University of Freiburg, Germany.,Faculty of Medicine, University of Freiburg, Germany
| | - Bernhard Richter
- Faculty of Medicine, University of Freiburg, Germany.,Institute of Musicians' Medicine, Medical Center - University of Freiburg, Germany.,Department of Otolaryngology, Medical Center - University of Freiburg, Germany
| | - Matthias Echternach
- Faculty of Medicine, University of Freiburg, Germany.,Institute of Musicians' Medicine, Medical Center - University of Freiburg, Germany.,Department of Otolaryngology, Medical Center - University of Freiburg, Germany
| |
Collapse
|
4
|
Campbell-Washburn AE, Faranesh AZ, Lederman RJ, Hansen MS. Magnetic Resonance Sequences and Rapid Acquisition for MR-Guided Interventions. Magn Reson Imaging Clin N Am 2015; 23:669-79. [PMID: 26499283 DOI: 10.1016/j.mric.2015.05.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Interventional MR uses rapid imaging to guide diagnostic and therapeutic procedures. One of the attractions of MR-guidance is the abundance of inherent contrast mechanisms available. Dynamic procedural guidance with real-time imaging has pushed the limits of MR technology, demanding rapid acquisition and reconstruction paired with interactive control and device visualization. This article reviews the technical aspects of real-time MR sequences that enable MR-guided interventions.
Collapse
Affiliation(s)
- Adrienne E Campbell-Washburn
- Cardiovascular and Pulmonary Branch, Division of Intramural Research, National Heart, Lung, and Blood Institute, National Institutes of Health, 9000 Rockville Pike, Building 10, Room B1D416, Bethesda, MD 20892, USA.
| | - Anthony Z Faranesh
- Cardiovascular and Pulmonary Branch, Division of Intramural Research, National Heart, Lung, and Blood Institute, National Institutes of Health, 9000 Rockville Pike, Building 10, Room 2C713, Bethesda, MD 20892, USA
| | - Robert J Lederman
- Cardiovascular and Pulmonary Branch, Division of Intramural Research, National Heart, Lung, and Blood Institute, National Institutes of Health, 9000 Rockville Pike, Building 10, Room 2C713, Bethesda, MD 20892, USA
| | - Michael S Hansen
- Cardiovascular and Pulmonary Branch, Division of Intramural Research, National Heart, Lung, and Blood Institute, National Institutes of Health, 9000 Rockville Pike, Building 10, Room B1D416, Bethesda, MD 20892, USA
| |
Collapse
|
5
|
Brunner A, Maier F, Krafft AJ, Semmler W, Bock M. Two eyes see more than one: double echo stereoscopic MRA for rapid 3D visualization of vascular structures. MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE 2012; 25:411-8. [PMID: 22476546 DOI: 10.1007/s10334-012-0313-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2011] [Revised: 02/09/2012] [Accepted: 03/01/2012] [Indexed: 11/28/2022]
Abstract
OBJECT A three-dimensional (3D) visualization of the target region during intravascular interventions in real-time is challenging since the acquisition of a time-consuming 3D dataset is required. In this work, a novel stereoscopic double echo sequence for achieving 3D depth perception by sampling only two oblique projection images is presented. MATERIALS AND METHODS A double echo (DE) FLASH pulse sequence was developed to acquire continuously stereoscopic image pairs of the vascular target anatomy. Stereo image data were displayed on a stereoscopic 3D LCD monitor in real time after image reconstruction. Phantom experiments followed by a depth perception test were performed to assess the usability of the stereo image pairs for 3D visualization. In an animal experiment the sequence was tested in vivo and was compared with a slower interleaved (IL) sequence variant. RESULTS In the phantom experiments an SNR difference of 6 % between left and right image was found which did not influence the depth perception. The DE acquisition was superior to the IL sequence (SNR(DE) = 10.3, 2.3 images/s over SNR(IL) = 7.1, 1.7 images/s), and during contrast enhancement the abdominal arterial vasculature was clearly perceived as a 3D structure. CONCLUSION A novel stereoscopic DE pulse sequence can be utilized for the fast 3D stereoscopic visualization of vascular structures in real-time.
Collapse
Affiliation(s)
- Alexander Brunner
- Department of Medical Physics in Radiology, German Cancer Research Center, DKFZ, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany.
| | | | | | | | | |
Collapse
|
6
|
Rauschenberg J, Krafft AJ, Maier F, Zamecnik P, Semmler W, Bock M. Outer volume suppression in steady state sequences (OVSuSS) for percutaneous interventions. Magn Reson Med 2011; 66:123-34. [DOI: 10.1002/mrm.22789] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2010] [Revised: 11/25/2010] [Accepted: 12/02/2010] [Indexed: 11/10/2022]
|
7
|
Real-time MR navigation and localization of an intravascular catheter with ferromagnetic components. MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE 2010; 23:153-63. [DOI: 10.1007/s10334-010-0214-y] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2010] [Revised: 03/26/2010] [Accepted: 04/20/2010] [Indexed: 11/25/2022]
|
8
|
Doneva M, Börnert P. Automatic coil selection for channel reduction in SENSE-based parallel imaging. MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE 2008; 21:187-96. [PMID: 18386087 DOI: 10.1007/s10334-008-0110-x] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2007] [Accepted: 03/04/2008] [Indexed: 11/26/2022]
Abstract
OBJECTIVE Coil arrays with large number of receive elements allow improved imaging performance and higher signal-to-noise-ratio. The MR systems supporting these arrays have to handle an increased amount of data and higher reconstruction burden. To overcome these problems, data reduction techniques need to be applied, realized either by linear combination of the original coil data prior to reconstruction or by discarding particular data from unimportant coil elements. MATERIALS AND METHODS This work focuses on the latter approach and presents an efficient algorithm for automatic coil selection applicable to SENSE imaging. A singular value decomposition (SVD)-based coil selection is proposed that performs a coil element ranking quantifying the contribution of each coil element to the image reconstruction allowing appropriate coil selection. This approach makes use of the coil sensitivity information and takes reduction factor and phase encoding direction into account. RESULTS Simulations, phantom and in vivo experiments were performed to validate the SVD-based coil selection algorithm. The proposed approach proved to be computationally efficient without remarkable image quality degradation. CONCLUSION The SVD-based approach offers the opportunity for fast automatic coil selection. This could simplify clinical workflow and may, furthermore, pave the way for various 2D real-time and interventional applications.
Collapse
|