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García MJ, Angulo M, Romera FJ, Lucena C, Pérez-Vicente R. A shoot derived long distance iron signal may act upstream of the IMA peptides in the regulation of Fe deficiency responses in Arabidopsis thaliana roots. FRONTIERS IN PLANT SCIENCE 2022; 13:971773. [PMID: 36105702 PMCID: PMC9465050 DOI: 10.3389/fpls.2022.971773] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 08/10/2022] [Indexed: 05/28/2023]
Abstract
When plants suffer from Fe deficiency, they develop morphological and physiological responses, mainly in their roots, aimed to facilitate Fe mobilization and uptake. Once Fe has been acquired in sufficient quantity, the responses need to be switched off to avoid Fe toxicity and to conserve energy. Several hormones and signaling molecules, such as ethylene, auxin and nitric oxide, have been involved in the activation of Fe deficiency responses in Strategy I plants. These hormones and signaling molecules have almost no effect when applied to plants grown under Fe-sufficient conditions, which suggests the existence of a repressive signal related to the internal Fe content. The nature of this repressive signal is not known yet many experimental results suggest that is not related to the whole root Fe content but to some kind of Fe compound moving from leaves to roots through the phloem. After that, this signal has been named LOng-Distance Iron Signal (LODIS). Very recently, a novel family of small peptides, "IRON MAN" (IMA), has been identified as key components of the induction of Fe deficiency responses. However, the relationship between LODIS and IMA peptides is not known. The main objective of this work has been to clarify the relationship between both signals. For this, we have used Arabidopsis wild type (WT) Columbia and two of its mutants, opt3 and frd3, affected, either directly or indirectly, in the transport of Fe (LODIS) through the phloem. Both mutants present constitutive activation of Fe acquisition genes when grown in a Fe-sufficient medium despite the high accumulation of Fe in their roots. Arabidopsis WT Columbia plants and both mutants were treated with foliar application of Fe, and later on the expression of IMA and Fe acquisition genes was analyzed. The results obtained suggest that LODIS may act upstream of IMA peptides in the regulation of Fe deficiency responses in roots. The possible regulation of IMA peptides by ethylene has also been studied. Results obtained with ethylene precursors and inhibitors, and occurrence of ethylene-responsive cis-acting elements in the promoters of IMA genes, suggest that IMA peptides could also be regulated by ethylene.
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Affiliation(s)
- María José García
- Department of Agronomy (DAUCO-María de Maeztu Unit of Excellence), Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Macarena Angulo
- Department of Agronomy (DAUCO-María de Maeztu Unit of Excellence), Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Francisco Javier Romera
- Department of Agronomy (DAUCO-María de Maeztu Unit of Excellence), Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Carlos Lucena
- Department of Botany, Ecology and Plant Physiology, Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Rafael Pérez-Vicente
- Department of Botany, Ecology and Plant Physiology, Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
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The interplay of phloem-mobile signals in plant development and stress response. Biosci Rep 2021; 40:226464. [PMID: 32955092 PMCID: PMC7538631 DOI: 10.1042/bsr20193329] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Revised: 09/16/2020] [Accepted: 09/18/2020] [Indexed: 01/28/2023] Open
Abstract
Plants integrate a variety of biotic and abiotic factors for optimal growth in their given environment. While some of these responses are local, others occur distally. Hence, communication of signals perceived in one organ to a second, distal part of the plant and the coordinated developmental response require an intricate signaling system. To do so, plants developed a bipartite vascular system that mediates the uptake of water, minerals, and nutrients from the soil; transports high-energy compounds and building blocks; and traffics essential developmental and stress signals. One component of the plant vasculature is the phloem. The development of highly sensitive mass spectrometry and molecular methods in the last decades has enabled us to explore the full complexity of the phloem content. As a result, our view of the phloem has evolved from a simple transport path of photoassimilates to a major highway for pathogens, hormones and developmental signals. Understanding phloem transport is essential to comprehend the coordination of environmental inputs with plant development and, thus, ensure food security. This review discusses recent developments in its role in long-distance signaling and highlights the role of some of the signaling molecules. What emerges is an image of signaling paths that do not just involve single molecules but rather, quite frequently an interplay of several distinct molecular classes, many of which appear to be transported and acting in concert.
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Gao P, Kasama T, Godonoga M, Ogawa A, Sone C, Komine M, Endo Y, Koide T, Miyake R. A needle-type micro-sampling device for collecting nanoliter sap sample from plants. Anal Bioanal Chem 2021; 413:3081-3091. [PMID: 33733702 DOI: 10.1007/s00216-021-03246-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2021] [Revised: 02/18/2021] [Accepted: 02/19/2021] [Indexed: 10/21/2022]
Abstract
In plant research, measuring the physiological parameters of plants is vital for understanding the behavior and response of plants to changes in the external environment. Plant sap analysis provides an approach for elucidating the physiological condition of plants. However, to facilitate accurate sap analysis, a sampling device capable of collecting sap samples from plants is required. In this paper, a minimally invasive, needle-type micro-sampling device capable of collecting nanoliter (~ 91 nL) quantities of sap from plants is described. The developed micro-sampling system showed great reproducibility (3%) in experiments designed to assess sampling performance. As a proof of concept, sap samples were collected continuously from target plants with the micro-sampling system, and the dynamic changes in potassium ions, plant hormones and sugar levels inside plants were analyzed. The results demonstrated the feasibility of the micro-sampling device and its potential for developing a measurement system for plant research in the future.
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Affiliation(s)
- Panpan Gao
- Microfluidic Integrated Circuits Research Laboratory, Department of Bioengineering, School of Engineering, The University of Tokyo, 113-8656, Tokyo, Japan
| | - Toshihiro Kasama
- Microfluidic Integrated Circuits Research Laboratory, Department of Bioengineering, School of Engineering, The University of Tokyo, 113-8656, Tokyo, Japan
| | - Maia Godonoga
- Microfluidic Integrated Circuits Research Laboratory, Department of Bioengineering, School of Engineering, The University of Tokyo, 113-8656, Tokyo, Japan
| | - Atsushi Ogawa
- Department of Biological Production, Akita Prefectural University, Akita, 010-0195, Japan
| | - Chiharu Sone
- Department of Biological Production, Akita Prefectural University, Akita, 010-0195, Japan
| | - Masashi Komine
- Department of Biological Production, Akita Prefectural University, Akita, 010-0195, Japan
| | - Yoshishige Endo
- Microfluidic Integrated Circuits Research Laboratory, Department of Bioengineering, School of Engineering, The University of Tokyo, 113-8656, Tokyo, Japan
| | - Tetsushi Koide
- Research Institute for Nanodevice and Bio Systems, Hiroshima University, Hiroshima, 739-0046, Japan
| | - Ryo Miyake
- Microfluidic Integrated Circuits Research Laboratory, Department of Bioengineering, School of Engineering, The University of Tokyo, 113-8656, Tokyo, Japan.
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García MJ, Corpas FJ, Lucena C, Alcántara E, Pérez-Vicente R, Zamarreño ÁM, Bacaicoa E, García-Mina JM, Bauer P, Romera FJ. A Shoot Fe Signaling Pathway Requiring the OPT3 Transporter Controls GSNO Reductase and Ethylene in Arabidopsis thaliana Roots. FRONTIERS IN PLANT SCIENCE 2018; 9:1325. [PMID: 30254659 PMCID: PMC6142016 DOI: 10.3389/fpls.2018.01325] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2018] [Accepted: 08/23/2018] [Indexed: 05/12/2023]
Abstract
Ethylene, nitric oxide (NO) and glutathione (GSH) increase in Fe-deficient roots of Strategy I species where they participate in the up-regulation of Fe acquisition genes. However, S-nitrosoglutathione (GSNO), derived from NO and GSH, decreases in Fe-deficient roots. GSNO content is regulated by the GSNO-degrading enzyme S-nitrosoglutathione reductase (GSNOR). On the other hand, there are several results showing that the regulation of Fe acquisition genes does not solely depend on hormones and signaling molecules (such as ethylene or NO), which would act as activators, but also on the internal Fe content of plants, which would act as a repressor. Moreover, different results suggest that total Fe in roots is not the repressor of Fe acquisition genes, but rather the repressor is a Fe signal that moves from shoots to roots through the phloem [hereafter named LOng Distance Iron Signal (LODIS)]. To look further in the possible interactions between LODIS, ethylene and GSNOR, we compared Arabidopsis WT Columbia and LODIS-deficient mutant opt3-2 plants subjected to different Fe treatments that alter LODIS content. The opt3-2 mutant is impaired in the loading of shoot Fe into the phloem and presents constitutive expression of Fe acquisition genes. In roots of both Columbia and opt3-2 plants we determined 1-aminocyclopropane-1-carboxylic acid (ACC, ethylene precursor), expression of ethylene synthesis and signaling genes, and GSNOR expression and activity. The results obtained showed that both 'ethylene' (ACC and the expression of ethylene synthesis and signaling genes) and 'GSNOR' (expression and activity) increased in Fe-deficient WT Columbia roots. Additionally, Fe-sufficient opt3-2 roots had higher 'ethylene' and 'GSNOR' than Fe-sufficient WT Columbia roots. The increase of both 'ethylene' and 'GSNOR' was not related to the total root Fe content but to the absence of a Fe shoot signal (LODIS), and was associated with the up-regulation of Fe acquisition genes. The possible relationship between GSNOR(GSNO) and ethylene is discussed.
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Affiliation(s)
- María J. García
- Department of Botany, Ecology and Plant Physiology, Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Francisco J. Corpas
- Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, Spanish National Research Council, Granada, Spain
| | - Carlos Lucena
- Department of Agronomy, Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Esteban Alcántara
- Department of Agronomy, Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Rafael Pérez-Vicente
- Department of Botany, Ecology and Plant Physiology, Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
| | - Ángel M. Zamarreño
- Department of Environmental Biology, Faculty of Sciences, University of Navarra, Pamplona, Spain
| | - Eva Bacaicoa
- Department of Environmental Biology, Faculty of Sciences, University of Navarra, Pamplona, Spain
| | - José M. García-Mina
- Department of Environmental Biology, Faculty of Sciences, University of Navarra, Pamplona, Spain
| | - Petra Bauer
- Institute of Botany, University of Düsseldorf, Düsseldorf, Germany
| | - Francisco J. Romera
- Department of Agronomy, Campus de Excelencia Internacional Agroalimentario, Universidad de Córdoba, Córdoba, Spain
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Hsueh YC, Nicolaisen K, Gross LE, Nöthen J, Schauer N, Vojta L, Ertel F, Koch I, Ladig R, Fulgosi H, Fernie AR, Schleiff E. The outer membrane Omp85-like protein P39 influences metabolic homeostasis in mature Arabidopsis thaliana. PLANT BIOLOGY (STUTTGART, GERMANY) 2018; 20:825-833. [PMID: 29758131 DOI: 10.1111/plb.12839] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Accepted: 05/07/2018] [Indexed: 06/08/2023]
Abstract
The Omp85 proteins form a large membrane protein family in bacteria and eukaryotes. Omp85 proteins are composed of a C-terminal β-barrel-shaped membrane domain and one or more N-terminal polypeptide transport-associated (POTRA) domains. However, Arabidopsis thaliana contains two genes coding for Omp85 proteins without a POTRA domain. One gene is designated P39, according to the molecular weight of the encoded protein. The protein is targeted to plastids and it was established that p39 has electrophysiological properties similar to other Omp85 family members, particularly to that designated as Toc75V/Oep80. We analysed expression of the gene and characterised two T-DNA insertion mutants, focusing on alterations in photosynthetic activity, plastid ultrastructure, global expression profile and metabolome. We observed pronounced expression of P39, especially in veins. Mutants of P39 show growth aberrations, reduced photosynthetic activity and changes in plastid ultrastructure, particularly in the leaf tip. Further, they display global alteration of gene expression and metabolite content in leaves of mature plants. We conclude that the function of the plastid-localised and vein-specific Omp85 family protein p39 is important, but not essential, for maintenance of metabolic homeostasis of full-grown A. thaliana plants. Further, the function of p39 in veins influences the functionality of other plant tissues. The link connecting p39 function with metabolic regulation in mature A. thaliana is discussed.
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Affiliation(s)
- Y-C Hsueh
- Department of Molecular Cell Biology of Plants, Goethe University, Frankfurt, Germany
| | - K Nicolaisen
- Department of Molecular Cell Biology of Plants, Goethe University, Frankfurt, Germany
| | - L E Gross
- Department of Molecular Cell Biology of Plants, Goethe University, Frankfurt, Germany
| | - J Nöthen
- Department of Molecular Cell Biology of Plants, Goethe University, Frankfurt, Germany
- Department of Mathematics and Informatics, Goethe University, Frankfurt, Germany
| | - N Schauer
- MPI für Molekulare Pflanzenphysiologie, Potsdam, Germany
| | - L Vojta
- Division of Molecular Biology, Institute Ruđer Bošković, Zagreb, Croatia
| | - F Ertel
- Department of Molecular Cell Biology of Plants, Goethe University, Frankfurt, Germany
| | - I Koch
- Department of Mathematics and Informatics, Goethe University, Frankfurt, Germany
| | - R Ladig
- Department of Molecular Cell Biology of Plants, Goethe University, Frankfurt, Germany
| | - H Fulgosi
- Division of Molecular Biology, Institute Ruđer Bošković, Zagreb, Croatia
| | - A R Fernie
- MPI für Molekulare Pflanzenphysiologie, Potsdam, Germany
| | - E Schleiff
- Department of Molecular Cell Biology of Plants, Goethe University, Frankfurt, Germany
- Buchmann Institute for Molecular Life Sciences, Frankfurt, Germany
- Frankfurt Institute for Advanced Studies, Frankfurt, Germany
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Li W, Lan P. The Understanding of the Plant Iron Deficiency Responses in Strategy I Plants and the Role of Ethylene in This Process by Omic Approaches. FRONTIERS IN PLANT SCIENCE 2017; 8:40. [PMID: 28174585 PMCID: PMC5259694 DOI: 10.3389/fpls.2017.00040] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2016] [Accepted: 01/09/2017] [Indexed: 05/19/2023]
Abstract
Iron (Fe) is an essential plant micronutrient but is toxic in excess. Fe deficiency chlorosis is a major constraint for plant growth and causes severe losses of crop yields and quality. Under Fe deficiency conditions, plants have developed sophisticated mechanisms to keep cellular Fe homeostasis via various physiological, morphological, metabolic, and gene expression changes to facilitate the availability of Fe. Ethylene has been found to be involved in the Fe deficiency responses of plants through pharmacological studies or by the use of ethylene mutants. However, how ethylene is involved in the regulations of Fe starvation responses remains not fully understood. Over the past decade, omics approaches, mainly focusing on the RNA and protein levels, have been used extensively to investigate global gene expression changes under Fe-limiting conditions, and thousands of genes have been found to be regulated by Fe status. Similarly, proteome profiles have uncovered several hallmark processes that help plants adapt to Fe shortage. To find out how ethylene participates in the Fe deficiency response and explore putatively novel regulators for further investigation, this review emphasizes the integration of those genes and proteins, derived from omics approaches, regulated both by Fe deficiency, and ethylene into a systemic network by gene co-expression analysis.
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Affiliation(s)
- Wenfeng Li
- Collaborative Innovation Center of Sustainable Forestry in Southern China of Jiangsu Province, College of Biology and the Environment, Nanjing Forestry UniversityNanjing, China
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of SciencesNanjing, China
| | - Ping Lan
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of SciencesNanjing, China
- *Correspondence: Ping Lan
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Navarro-León E, Albacete A, Torre-González ADL, Ruiz JM, Blasco B. Phytohormone profile in Lactuca sativa and Brassica oleracea plants grown under Zn deficiency. PHYTOCHEMISTRY 2016; 130:85-9. [PMID: 27543253 DOI: 10.1016/j.phytochem.2016.08.003] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2016] [Revised: 08/05/2016] [Accepted: 08/10/2016] [Indexed: 06/06/2023]
Abstract
Phytohormones, structurally diverse compounds, are involved in multiple processes within plants, such as controlling plant growth and stress response. Zn is an essential micronutrient for plants and its deficiency causes large economic losses in crops. Therefore, the purpose of this study was to analyse the role of phytohormones in the Zn-deficiency response of two economically important species, i.e. Lactuca sativa and Brassica oleracea. For this, these two species were grown hydroponically with different Zn-application rates: 10 μM Zn as control and 0.1 μM Zn as deficiency treatment and phytohormone concentration was determined by U-HPLC-MS. Zn deficiency resulted in a substantial loss of biomass in L. sativa plants that was correlated with a decline in growth-promoting hormones such as indole-3-acetic acid (IAA), cytokinins (CKs), and gibberellins (GAs). However these hormones increased or stabilized their concentrations in B. oleracea and could help to maintain the biomass in this species. A lower concentration of stress-signaling hormones such as ethylene precursor aminocyclopropane-1-carboxylic acid (ACC), abscisic acid (ABA), salicylic acid (SA) and jasmonic acid (JA) and also CKs might be involved in Zn uptake in L. sativa while a rise in GA4, isopentenyl adenine (iP), and ACC and a fall in JA and SA might contribute to a better Zn-utilization efficiency (ZnUtE), as observed in B. oleracea plants.
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Affiliation(s)
- Eloy Navarro-León
- Department of Plant Physiology, Faculty of Sciences, University of Granada, 18071, Granada, Spain.
| | - Alfonso Albacete
- Department of Plant Nutrition, CEBAS-CSIC, Campus de Espinardo, E-30100, Espinardo, Murcia, Spain
| | | | - Juan M Ruiz
- Department of Plant Physiology, Faculty of Sciences, University of Granada, 18071, Granada, Spain
| | - Begoña Blasco
- Department of Plant Physiology, Faculty of Sciences, University of Granada, 18071, Granada, Spain
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Carella P, Wilson DC, Kempthorne CJ, Cameron RK. Vascular Sap Proteomics: Providing Insight into Long-Distance Signaling during Stress. FRONTIERS IN PLANT SCIENCE 2016; 7:651. [PMID: 27242852 PMCID: PMC4863880 DOI: 10.3389/fpls.2016.00651] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2016] [Accepted: 04/28/2016] [Indexed: 05/17/2023]
Abstract
The plant vascular system, composed of the xylem and phloem, is important for the transport of water, mineral nutrients, and photosynthate throughout the plant body. The vasculature is also the primary means by which developmental and stress signals move from one organ to another. Due to practical and technological limitations, proteomics analysis of xylem and phloem sap has been understudied in comparison to accessible sample types such as leaves and roots. However, recent advances in sample collection techniques and mass spectrometry technology are making it possible to comprehensively analyze vascular sap proteomes. In this mini-review, we discuss the emerging field of vascular sap proteomics, with a focus on recent comparative studies to identify vascular proteins that may play roles in long-distance signaling and other processes during stress responses in plants.
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Rodríguez-Celma J, Ceballos-Laita L, Grusak MA, Abadía J, López-Millán AF. Plant fluid proteomics: Delving into the xylem sap, phloem sap and apoplastic fluid proteomes. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2016; 1864:991-1002. [PMID: 27033031 DOI: 10.1016/j.bbapap.2016.03.014] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2015] [Revised: 03/15/2016] [Accepted: 03/23/2016] [Indexed: 12/12/2022]
Abstract
The phloem sap, xylem sap and apoplastic fluid play key roles in long and short distance transport of signals and nutrients, and act as a barrier against local and systemic pathogen infection. Among other components, these plant fluids contain proteins which are likely to be important players in their functionalities. However, detailed information about their proteomes is only starting to arise due to the difficulties inherent to the collection methods. This review compiles the proteomic information available to date in these three plant fluids, and compares the proteomes obtained in different plant species in order to shed light into conserved functions in each plant fluid. Inter-species comparisons indicate that all these fluids contain the protein machinery for self-maintenance and defense, including proteins related to cell wall metabolism, pathogen defense, proteolysis, and redox response. These analyses also revealed that proteins may play more relevant roles in signaling in the phloem sap and apoplastic fluid than in the xylem sap. A comparison of the proteomes of the three fluids indicates that although functional categories are somewhat similar, proteins involved are likely to be fluid-specific, except for a small group of proteins present in the three fluids, which may have a universal role, especially in cell wall maintenance and defense. This article is part of a Special Issue entitled: Plant Proteomics--a bridge between fundamental processes and crop production, edited by Dr. Hans-Peter Mock.
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Affiliation(s)
- Jorge Rodríguez-Celma
- University of East Anglia/John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom
| | - Laura Ceballos-Laita
- Department of Plant Nutrition, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), P.O. Box 13034, E-50080 Zaragoza, Spain
| | - Michael A Grusak
- USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030, USA
| | - Javier Abadía
- Department of Plant Nutrition, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), P.O. Box 13034, E-50080 Zaragoza, Spain
| | - Ana-Flor López-Millán
- Department of Plant Nutrition, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), P.O. Box 13034, E-50080 Zaragoza, Spain; USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030, USA.
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