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For: Heinze S, Putnam DK, Fischer AW, Kohlmann T, Weiner BE, Meiler J. CASP10-BCL::Fold efficiently samples topologies of large proteins. Proteins 2015;83:547-63. [PMID: 25581562 DOI: 10.1002/prot.24733] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2014] [Revised: 10/15/2014] [Accepted: 11/03/2014] [Indexed: 12/26/2022]
Number Cited by Other Article(s)
1
Kashani-Amin E, Tabatabaei-Malazy O, Sakhteman A, Larijani B, Ebrahim-Habibi A. A Systematic Review on Popularity, Application and Characteristics of Protein Secondary Structure Prediction Tools. Curr Drug Discov Technol 2020;16:159-172. [PMID: 29493456 DOI: 10.2174/1570163815666180227162157] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2017] [Revised: 02/15/2018] [Accepted: 02/22/2018] [Indexed: 01/22/2023]
2
Rosenfeld R, Alcalay R, Mechaly A, Lapidoth G, Epstein E, Kronman C, J Fleishman S, Mazor O. Improved antibody-based ricin neutralization by affinity maturation is correlated with slower off-rate values. Protein Eng Des Sel 2017;30:611-617. [PMID: 28472478 DOI: 10.1093/protein/gzx028] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 04/18/2017] [Indexed: 01/03/2023]  Open
3
Pushing the size limit of de novo structure ensemble prediction guided by sparse SDSL-EPR restraints to 200 residues: The monomeric and homodimeric forms of BAX. J Struct Biol 2016;195:62-71. [PMID: 27129417 DOI: 10.1016/j.jsb.2016.04.014] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2015] [Revised: 04/25/2016] [Accepted: 04/26/2016] [Indexed: 01/24/2023]
4
Fischer AW, Heinze S, Putnam DK, Li B, Pino JC, Xia Y, Lopez CF, Meiler J. CASP11--An Evaluation of a Modular BCL::Fold-Based Protein Structure Prediction Pipeline. PLoS One 2016;11:e0152517. [PMID: 27046050 PMCID: PMC4821492 DOI: 10.1371/journal.pone.0152517] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2015] [Accepted: 03/15/2016] [Indexed: 11/18/2022]  Open
5
Putnam DK, Weiner BE, Woetzel N, Lowe EW, Meiler J. BCL::SAXS: GPU accelerated Debye method for computation of small angle X-ray scattering profiles. Proteins 2015;83:1500-12. [PMID: 26018949 PMCID: PMC4797635 DOI: 10.1002/prot.24838] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Revised: 05/08/2015] [Accepted: 05/19/2015] [Indexed: 12/25/2022]
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