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Al-Younis I, Moosa B, Kwiatkowski M, Jaworski K, Wong A, Gehring C. Functional Crypto-Adenylate Cyclases Operate in Complex Plant Proteins. FRONTIERS IN PLANT SCIENCE 2021; 12:711749. [PMID: 34456950 PMCID: PMC8387589 DOI: 10.3389/fpls.2021.711749] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Accepted: 07/21/2021] [Indexed: 05/08/2023]
Abstract
Adenylyl cyclases (ACs) and their catalytic product cAMP are regulatory components of many plant responses. Here, we show that an amino acid search motif based on annotated adenylate cyclases (ACs) identifies 12 unique Arabidopsis thaliana candidate ACs, four of which have a role in the biosynthesis of the stress hormone abscisic acid (ABA). One of these, the 9-cis-epoxycarotenoid dioxygenase (NCED3 and At3g14440), was identified by sequence and structural analysis as a putative AC and then tested experimentally with two different methods. Given that the in vitro activity is low (fmoles cAMP pmol-1 protein min-1), but highly reproducible, we term the enzyme a crypto-AC. Our results are consistent with a role for ACs with low activities in multi-domain moonlighting proteins that have at least one other distinct molecular function, such as catalysis or ion channel activation. We propose that crypto-ACs be examined from the perspective that considers their low activities as an innate feature of regulatory ACs embedded within multi-domain moonlighting proteins. It is therefore conceivable that crypto-ACs form integral components of complex plant proteins participating in intra-molecular regulatory mechanisms, and in this case, potentially linking cAMP to ABA synthesis.
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Affiliation(s)
- Inas Al-Younis
- Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Basem Moosa
- Physical Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Mateusz Kwiatkowski
- Chair of Plant Physiology and Biotechnology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Krzysztof Jaworski
- Chair of Plant Physiology and Biotechnology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Aloysius Wong
- Department of Biology, College of Science and Technology, Wenzhou-Kean University, Wenzhou, China
- Zhejiang Bioinformatics International Science and Technology Cooperation Center of Wenzhou-Kean University, Wenzhou, China
| | - Chris Gehring
- Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Department of Chemistry, Biology & Biotechnology, University of Perugia, Perugia, Italy
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Ito M, Takahashi H, Sawasaki T, Ohnishi K, Hikichi Y, Kiba A. Novel type of adenylyl cyclase participates in tabtoxinine-β-lactam-induced cell death and occurrence of wildfire disease in Nicotiana benthamiana. PLANT SIGNALING & BEHAVIOR 2014; 9:e27420. [PMID: 24398509 PMCID: PMC4091384 DOI: 10.4161/psb.27420] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2013] [Revised: 12/03/2013] [Accepted: 12/03/2013] [Indexed: 05/04/2023]
Abstract
Tabtoxinine-β-lactam (TβL), a non-specific bacterial toxin, is produced by Pseudomonas syringae pv. tabaci, the causal agent of tobacco wildfire disease. TβL causes the plant cell death by the inhibiting glutamine synthetase, which leads to an abnormal accumulation of ammonium ions. To better understand the molecular mechanisms involved in TβL-induced cell death and necrotic wildfire lesions, we focused on adenylyl cyclase in Nicotiana benthamiana. We isolated the gene designated as NbAC (Nicotiana benthamiana adenylyl cyclase). Recombinant NbAC protein showed adenylyl cyclase activity in vitro. TβL-induced necrotic lesions were significantly suppressed in NbAC-silenced leaves compared with control plant leaves. However, the amount of ammonium ions was scarcely affected by NbAC-silencing. Furthermore, the silencing of NbAC also suppressed l-methionine sulfoximine-induced cell death without any changes in the amount of ammonium accumulated. When inoculated directly with P. syringae pv tabaci, NbAC-silenced plants showed reduced symptoms. These results suggest that NbAC might play an essential role in intracellular signal transduction during TβL-induced cell death and necrotic wildfire disease development.
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Affiliation(s)
- Makoto Ito
- Laboratory of Plant Pathology and Biotechnology; Faculty of Agriculture; Kochi University; Nankoku, Japan
| | | | | | - Kouhei Ohnishi
- Research Institute of Molecular Genetics; Kochi University; Nankoku, Japan
| | - Yasufumi Hikichi
- Laboratory of Plant Pathology and Biotechnology; Faculty of Agriculture; Kochi University; Nankoku, Japan
| | - Akinori Kiba
- Laboratory of Plant Pathology and Biotechnology; Faculty of Agriculture; Kochi University; Nankoku, Japan
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Gao F, Han X, Wu J, Zheng S, Shang Z, Sun D, Zhou R, Li B. A heat-activated calcium-permeable channel--Arabidopsis cyclic nucleotide-gated ion channel 6--is involved in heat shock responses. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012; 70:1056-69. [PMID: 22372427 DOI: 10.1111/j.1365-313x.2012.04969.x] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
An increased concentration of cytosolic calcium ions (Ca²⁺) is an early response by plant cells to heat shock. However, the molecular mechanism underlying the heat-induced initial Ca²⁺ response in plants is unclear. In this study, we identified and characterized a heat-activated Ca²⁺-permeable channel in the plasma membrane of Arabidopsis thaliana root protoplasts using reverse genetic analysis and the whole-cell patch-clamp technique. The results indicated that A. thaliana cyclic nucleotide-gated ion channel 6 (CNGC6) mediates heat-induced Ca²⁺ influx and facilitates expression of heat shock protein (HSP) genes and the acquisition of thermotolerance. GUS and GFP reporter assays showed that CNGC6 expression is ubiquitous in A. thaliana, and the protein is localized to the plasma membrane of cells. Furthermore, it was found that the level of cytosolic cAMP was increased by a mild heat shock, that CNGC6 was activated by cytosolic cAMP, and that exogenous cAMP promoted the expression of HSP genes. The results reveal the role of cAMP in transduction of heat shock signals in plants. The correlation of an increased level of cytosolic cAMP in a heat-shocked plant with activation of the Ca²⁺ channels and downstream expression of HSP genes sheds some light on how plants transduce a heat stimulus into a signal cascade that leads to a heat shock response.
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Affiliation(s)
- Fei Gao
- Hebei Key Laboratory of Molecular and Cellular Biology, College of Life Science, Hebei Normal University, Shijiazhuang 050024, China
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Wu J, Qu H, Jin C, Shang Z, Wu J, Xu G, Gao Y, Zhang S. cAMP activates hyperpolarization-activated Ca2+ channels in the pollen of Pyrus pyrifolia. PLANT CELL REPORTS 2011; 30:1193-1200. [PMID: 21331543 DOI: 10.1007/s00299-011-1027-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2010] [Revised: 01/23/2011] [Accepted: 01/25/2011] [Indexed: 05/30/2023]
Abstract
Many signal-transduction processes in plant cells have been suggested to be triggered by signal-induced opening of calcium ion (Ca(2+)) channels in the plasma membrane. Cyclic nucleotides have been proposed to lead to an increase in cytosolic free Ca(2+) in pollen. However, direct recordings of cyclic-nucleotide-induced Ca(2+) currents in pollen have not yet been obtained. Here, we report that cyclic AMP (cAMP) activated a hyperpolarization-activated Ca(2+) channel in the Pyrus pyrifolia pollen tube using the patch-clamp technique, which resulted in a significant increase in pollen tube protoplast cytosolic-Ca(2+) concentration. Outside-out single channel configuration identified that cAMP directly increased the Ca(2+) channel open-probability without affecting channel conductance. cAMP-induced currents were composed of both Ca(2+) and K(+). However, cGMP failed to mimic the cAMP effect. Higher cytosolic free-Ca(2+) concentration significantly decreased the cAMP-induced currents. These results provide direct evidence for cAMP activation of hyperpolarization-activated Ca(2+) channels in the plasma membrane of pollen tubes, which, in turn, modulate cellular responses in regulation of pollen tube growth.
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Affiliation(s)
- Juyou Wu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, No. 6 Tongwei Road, Nanjing, China
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Ma W, Qi Z, Smigel A, Walker RK, Verma R, Berkowitz GA. Ca2+, cAMP, and transduction of non-self perception during plant immune responses. Proc Natl Acad Sci U S A 2009; 106:20995-1000. [PMID: 19933332 PMCID: PMC2780315 DOI: 10.1073/pnas.0905831106] [Citation(s) in RCA: 93] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2009] [Indexed: 01/20/2023] Open
Abstract
Ca(2+) influx is an early signal initiating cytosolic immune responses to pathogen perception in plant cells; molecular components linking pathogen recognition to Ca(2+) influx are not delineated. Work presented here provides insights into this biological system of non-self recognition and response activation. We have recently identified a cyclic nucleotide-activated ion channel as facilitating the Ca(2+) flux that initiates immune signaling in the plant cell cytosol. Work in this report shows that elevation of cAMP is a key player in this signaling cascade. We show that cytosolic Ca(2+) elevation, nitric oxide (NO) and reactive oxygen species generation, as well as immune signaling, lead to a hypersensitive response upon application of pathogens and/or conserved molecules that are components of microbes and are all dependent on cAMP generation. Exogenous cAMP leads to Ca(2+) channel-dependent cytosolic Ca(2+) elevation, NO generation, and defense response gene expression in the absence of the non-self pathogen signal. Inoculation of leaves with a bacterial pathogen leads to cAMP elevation coordinated with Ca(2+) rise. cAMP acts as a secondary messenger in plants; however, no specific protein has been heretofore identified as activated by cAMP in a manner associated with a signaling cascade in plants, as we report here. Our linkage of cAMP elevation in pathogen-inoculated plant leaves to Ca(2+) channels and immune signaling downstream from cytosolic Ca(2+) elevation provides a model for how non-self detection can be transduced to initiate the cascade of events in the cell cytosol that orchestrate pathogen defense responses.
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Affiliation(s)
- Wei Ma
- Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, 1390 Storrs Road, Storrs, CT 06269-4163
| | - Zhi Qi
- Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, 1390 Storrs Road, Storrs, CT 06269-4163
| | - Andries Smigel
- Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, 1390 Storrs Road, Storrs, CT 06269-4163
| | - Robin K. Walker
- Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, 1390 Storrs Road, Storrs, CT 06269-4163
| | - Rajeev Verma
- Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, 1390 Storrs Road, Storrs, CT 06269-4163
| | - Gerald A. Berkowitz
- Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, 1390 Storrs Road, Storrs, CT 06269-4163
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Abstract
The natural occurrence of cyclic nucleotides in higher plants, formerly a topic of fierce debate, is now established, as is the presence of nucleotidyl cyclases and cyclic nucleotide phosphodiesterases capable of their synthesis and breakdown. Here we describe the significant properties of cyclic nucleotides, also outlining their second messenger functions and the history of plant cyclic nucleotide research over its first three decades. Findings of the last five years are detailed within the context of the functional role of cyclic nucleotides in higher plants, with particular emphasis upon nucleotidyl cyclases and cyclic nucleotide-responsive protein kinases, -binding proteins and -gated ion channels, with future objectives and strategies discussed.
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Affiliation(s)
- Russell P Newton
- Biochemistry Group, School of Biological Sciences, Wallace Building, University of Wales Swansea, Singleton Park, Swansea SA2 8PP, UK.
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Lemtiri-Chlieh F, Berkowitz GA. Cyclic adenosine monophosphate regulates calcium channels in the plasma membrane of Arabidopsis leaf guard and mesophyll cells. J Biol Chem 2004; 279:35306-12. [PMID: 15199067 DOI: 10.1074/jbc.m400311200] [Citation(s) in RCA: 92] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The effect of cAMP on Ca(2+)-permeable channels from Arabidopsis thaliana leaf guard cell and mesophyll cell protoplasts was studied using the patch clamp technique. In the whole cell configuration, dibutyryl cAMP was found to increase a hyperpolarization-activated Ba(2+) conductance (I(Ba)). The increase of I(Ba) was blocked by the addition of GdCl(3). In excised outside-out patches, the addition of dibutyryl cAMP consistently activated a channel with particularly fast gating kinetics. Current/voltage analyses indicated a single channel conductance of approximately 13 picosiemens. In patches where we measured some channel activity prior to cAMP application, the data suggest that cAMP enhances channel activity without affecting the single channel conductance. The cAMP activation of these channels was reversible upon washout. The results obtained with excised patches indicate that the cAMP-activated I(Ba) seen in the whole cell configuration could be explained by a direct effect of cAMP on the Ca(2+) channel itself or a close entity to the channel. This work represents the first demonstration using patch clamp analysis of the presence in plant cell membranes of an ion channel directly activated by cAMP.
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Affiliation(s)
- Fouad Lemtiri-Chlieh
- Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, Storrs, Connecticut 06269-4067, USA
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