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Boeri EJ, Ruybal P, Dominguez ML, Fernandez NM, Becker P, Elena S, Escobar GI, Ayala SM, Hassan DB, Trangoni MD. Higher diversity of Brucella canis in Latin America, according to an MLVA_13 Bc analysis. Acta Trop 2023; 243:106914. [PMID: 37062420 DOI: 10.1016/j.actatropica.2023.106914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 03/03/2023] [Accepted: 03/28/2023] [Indexed: 04/18/2023]
Abstract
Brucella canis is the main causative agent of canine brucellosis, which affects domestic and wild canids and leads to clinical signs and symptoms of the reproductive and locomotor systems. Owing to the scarce information on this pathogen, here we addressed the genetic diversity of the circulating strains of this species in Argentina by following an MVLA_13 Bc scheme. The analyzed sample set consisted of 101 strains of B. canis isolates collected between 2006 and 2020 from canines of the Autonomous City of Buenos Aires (CABA) and other regions of Argentina, as well as 235 isolates from North America. . The analysis yielded 336 variants (Hunter-Gaston Diversity Index, HGDI equal to 1.0) showing high diversity on a global scale. The analysis of the six most variable markers also reveled high diversity and allowed further analysis regarding variant relationships. Although the diversity obtained using both schemes (all or the 6 most variable markers) was higher for the Latin American than for the North American strains, we cannot discard that this was due to biases in the sampling methodology or to the different health policies employed in these regions regarding the management of infected individuals. Altogether, the Argentine circulating strains are genetically diverse, but with no apparent geographical association. The markers used in the MLVA_13 Bc are variable and highly useful for the evaluation of outbreaks. Furthermore, the reduced panel of 6 markers (MLVA_6 Bc) proposed in this study is convenient for the study of B. canis strain diversity.
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Affiliation(s)
- Eduardo Jorge Boeri
- Instituto de Zoonosis Luis Pasteur, Av. Diaz Velez 4821 (1.405), División Inmunología y Diagnóstico, Laboratorio Sección Serología y Diagnóstico, Buenos Aires, Argentina.
| | - Paula Ruybal
- Universidad de Buenos Aires, Facultad de Medicina, Paraguay 2155, Departamento de Microbiología, Buenos Aires, Argentina; CONICET - Universidad de Buenos Aires, Instituto de Investigaciones en Microbiología y Parasitología Médica (IMPaM), Paraguay 2157, Buenos Aires, Argentina.
| | - María Luz Dominguez
- Instituto de Zoonosis Luis Pasteur, Av. Diaz Velez 4821 (1.405), División Inmunología y Diagnóstico, Laboratorio Sección Serología y Diagnóstico, Buenos Aires, Argentina.
| | - Natalia Mercedes Fernandez
- Instituto de Zoonosis Luis Pasteur, Av. Diaz Velez 4821 (1.405), División Inmunología y Diagnóstico, Laboratorio Sección Serología y Diagnóstico, Buenos Aires, Argentina.
| | - Paula Becker
- Instituto de Zoonosis Luis Pasteur, Av. Diaz Velez 4821 (1.405), División Inmunología y Diagnóstico, Laboratorio Sección Serología y Diagnóstico, Buenos Aires, Argentina.
| | - Sebastián Elena
- Laboratorio de Referencia de la OIE para Brucelosis, Dirección General de Laboratorio y Control Técnico (DiLab), Servicio Nacional de Sanidad y Calidad Agroalimentaria (SENASA), Martínez, 1640 Buenos Aires, Argentina.
| | - Gabriela Ileana Escobar
- Laboratorio de Brucelosis Laboratorio Nacional de Referencia INEI-ANLIS Dr. Carlos G. Malbrán. Av. Vélez Sarsfield 563, Ciudad Autónoma de Buenos Aires, Argentina..
| | - Sandra Marcela Ayala
- Laboratorio de Brucelosis Laboratorio Nacional de Referencia INEI-ANLIS Dr. Carlos G. Malbrán. Av. Vélez Sarsfield 563, Ciudad Autónoma de Buenos Aires, Argentina..
| | - Deborah Beatriz Hassan
- Laboratorio de Brucelosis Laboratorio Nacional de Referencia INEI-ANLIS Dr. Carlos G. Malbrán. Av. Vélez Sarsfield 563, Ciudad Autónoma de Buenos Aires, Argentina
| | - Marcos David Trangoni
- Laboratorio de Brucella, Campylobacter y Microbiota del rumen. Instituto de Biotecnología/Instituto de Agrobiotecnología y Biología Molecular (IB/IABIMO), UEDD INTA-CONICET, CICVyA, CNIA, INTA Hurlingham, Argentina.
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Wareth G, Abdel-Hamid NH, Hamdy MER, Elmonir W, Beleta EIM, El-Diasty M, Abdel-Glil MY, Melzer F, Neubauer H. Whole-genome sequencing (WGS) analysis of Brucella suis biovar 2 isolated from domestic pigs in Egypt for epidemiological and genetic diversity tracing. Vet Microbiol 2023; 277:109637. [PMID: 36586209 DOI: 10.1016/j.vetmic.2022.109637] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Revised: 12/13/2022] [Accepted: 12/19/2022] [Indexed: 12/24/2022]
Abstract
In the current study, 14 Brucella suis biovar 2 (B. suis bv 2) strains isolated from slaughter pigs in Cairo were sequenced using Illumina technology to investigate genetic diversity, antimicrobial resistance (AMR) genes, and virulence-associated determinants. These strains were the first B. suis bv 2 isolates from Egypt. To place them in a global context, 92 genomes of B. suis were retrieved from the NCBI database and used for comparison. The in-silico analysis of MLST showed that all isolates have ST16. No resistome but 43 virulomes have been found without differences in distribution. The cgMLST classified the Egyptian B. suis strains into a complex type (CT) encompassing four distinct cgMLST sequence types. The closest relatives were strain B. suis 94/11 of an unknown origin and a Danish strain. Whole-genome sequencing analysis proved low diversity of Egyptian B. suis isolates; thus, a single introduction event is assumed. Investigation of a large number of B. suis isolates from different governorates is required to tailor control measures to avoid further spread.
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Affiliation(s)
- Gamal Wareth
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, 07743 Jena, Germany; Department of Bacteriology, Immunology, and Mycology, Faculty of Veterinary Medicine, Benha University, Moshtohor, Toukh 13736, Egypt.
| | - Nour H Abdel-Hamid
- Agricultural Research Center (ARC), Animal Health Research Institute (AHRI) P.O. Box 264-Giza, Cairo 12618, Egypt.
| | - Mahmoud E R Hamdy
- Agricultural Research Center (ARC), Animal Health Research Institute (AHRI) P.O. Box 264-Giza, Cairo 12618, Egypt.
| | - Walid Elmonir
- Department of Hygiene and Preventive Medicine (Zoonoses), Faculty of Veterinary Medicine, Kafrelsheikh University, Kafrelsheikh, Egypt.
| | - Eman I M Beleta
- Agricultural Research Center (ARC), Animal Health Research Institute (AHRI) P.O. Box 264-Giza, Cairo 12618, Egypt.
| | - Mohamed El-Diasty
- Agricultural Research Center (ARC), Animal Health Research Institute (AHRI) P.O. Box 264-Giza, Cairo 12618, Egypt.
| | - Mostafa Y Abdel-Glil
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, 07743 Jena, Germany.
| | - Falk Melzer
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, 07743 Jena, Germany.
| | - Heinrich Neubauer
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, 07743 Jena, Germany.
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Hamdy MER, Abdel-Haleem MH, Dawod RE, Ismail RI, Hazem SS, Fahmy HA, Abdel-Hamid NH. First seroprevalence and molecular identification report of Brucella canis among dogs in Greater Cairo region and Damietta Governorate of Egypt. Vet World 2023; 16:229-238. [PMID: 36855351 PMCID: PMC9967726 DOI: 10.14202/vetworld.2023.229-238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Accepted: 12/27/2022] [Indexed: 02/03/2023] Open
Abstract
Background and Aim Given the rise in stray and imported dogs in Egypt over the past 5 years, it is surprising that no report of Brucella canis infection in dogs or humans has been documented in Egypt's published papers. This study aimed to detect the presence of antibodies against the rough (B. canis) and smooth Brucellae among dogs in Egypt and to characterize the Brucella species circulating in dogs. Materials and Methods Blood samples (n = 449) were collected from owned and stray dogs in the Greater Cairo region (n = 309) and Damietta governorate (n = 140). The apparent, true, and total seroprevalence of canine brucellosis caused by B. canis infection were calculated using the 2-mercaptoethanol tube agglutination test (2-ME TAT) and rapid slide agglutination test (RSAT). We used the rose Bengal test (RBT) and the buffered acidified plate antigen test (BAPAT) to check the serum samples from dogs for the presence of antibodies against smooth Brucellae. Three polymerase chain reaction (PCR) assays - Bruce-ladder PCR, B. canis species-specific PCR (BcSS-PCR), and Abortus Melitensis Ovis Suis (AMOS)-PCR - were used to determine the Brucella species in the buffy coats of the serologically positive dogs. Results The overall apparent and true prevalence of B. canis infection in dogs were estimated to be 3.8% and 13.2%. The estimated true prevalence in stray dogs (15%) was higher than in owned dogs (12.5%). The BAPAT and the RBT using smooth antigens revealed that 11 (2.4%) and 9 (2%) were positive. Bruce-ladder PCR targeting eryC, ABC, and Polysaccharide deacetylase genes was able to identify B. canis in nine out of 17 buffy coat samples. AMOS-PCR identified the eight undetermined Brucella species by Bruce-ladder PCR as Brucella abortus (n = 4) and Brucella melitensis (n = 4). To exclude the presence of Brucella suis, a one-step species-specific BcSS-PCR was performed and specifically amplified all B. canis DNA (n = 9) the same as did the Bruce-ladder PCR. Conclusion To the best of our knowledge, this is the first report of B. canis detection in dogs in Egypt. Molecular identification of B. abortus and B. melitensis in the Egyptian canines highlights the role of stray dogs in brucellosis remerging in Brucellosis-free dairy farms. Brucella canis infection can be diagnosed specifically with the one-step BcSS-PCR. The obtained results set-an-alarm to the veterinary authorities to launch plans to control this disease in dogs.
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Affiliation(s)
- Mahmoud E. R. Hamdy
- Department of Brucellosis Research, Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt
| | - Mahmoud H. Abdel-Haleem
- Department of Brucellosis Research, Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt
| | - Rehab E. Dawod
- Department of Bacteriology, Agricultural Research Center, Animal Health Research Institute (Damietta Branch), Egypt
| | - Rania I. Ismail
- Department of Brucellosis Research, Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt
| | - Soliman S. Hazem
- Department of Brucellosis Research, Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt
| | - Hanan A. Fahmy
- Department of Biotechnology, Animal Health Research Institute, Agricultural Research Center, Dokki, Giza, 12618 Egypt
| | - Nour H. Abdel-Hamid
- Department of Brucellosis Research, Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt,Corresponding author: Nour H. Abdel-Hamid, e-mail: Co-authors: MERH: , MHA: , RED: , RII: , SSH: , HAF:
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Holzer K, Wareth G, El-Diasty M, Abdel-Hamid NH, Hamdy MER, Moustafa SA, Linde J, Bartusch F, Abdel-Glil MY, Sayour AE, Elbauomy EM, Elhadidy M, Melzer F, Beyer W. Tracking the distribution, genetic diversity and lineage of Brucella melitensis recovered from humans and animals in Egypt based on core-genome SNP analysis and in silico MLVA-16. Transbound Emerg Dis 2022; 69:3952-3963. [PMID: 36383491 DOI: 10.1111/tbed.14768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 10/07/2022] [Accepted: 11/11/2022] [Indexed: 11/17/2022]
Abstract
Brucellosis is one of the most common neglected zoonotic diseases globally, with a public health significance and a high economic loss in the livestock industry caused by the bacteria of the genus Brucella. In this study, 136 Egyptian Brucella melitensis strains isolated from animals and humans between 2001 and 2020 were analysed by examining the whole-core-genome single-nucleotide polymorphism (cgSNP) in comparison to the in silico multilocus variable number of tandem repeat analysis (MLVA-16). Almost all Egyptian isolates were belonging to the West Mediterranean clade, except two isolates from buffalo and camel were belonging to the American and East Mediterranean clades, respectively. A significant correlation between the human case of brucellosis and the possible source of infection from animals was found. It seems that several outbreak strains already existing for many years have been spread over long distances and between many governorates. The cgSNP analysis, in combination with epidemiological metadata, allows a better differentiation than the MLVA-16 genotyping method and, hence, the source definition and tracking of outbreak strains. The MLVA based on the currently used 16 markers is not suitable for this task. Our results revealed 99 different cgSNP genotypes with many different outbreak strains, both older and widely distributed ones and rather newly introduced ones as well. This indicates several different incidents and sources of infections, probably by imported animals from other countries to Egypt. Comparing our panel of isolates to public databases by cgSNP analysis, the results revealed near relatives from Italy. Moreover, near relatives from the United States, France, Austria and India were found by in silico MLVA.
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Affiliation(s)
- Katharina Holzer
- Department of Livestock Infectiology and Environmental Hygiene, Institute of Animal Science, University of Hohenheim, Stuttgart, Germany
| | - Gamal Wareth
- Friedrich-Loeffler Institut, Institute for Bacterial Infections and Zoonoses, Jena, Germany.,Department of Bacteriology, Immunology, and Mycology, Faculty of Veterinary Medicine, Benha University, Toukh, Moshtohor, Egypt
| | - Mohamed El-Diasty
- Animal Health Research Institute, Agricultural Research Center, Cairo, Egypt
| | - Nour H Abdel-Hamid
- Animal Health Research Institute, Agricultural Research Center, Cairo, Egypt
| | - Mahmoud E R Hamdy
- Animal Health Research Institute, Agricultural Research Center, Cairo, Egypt
| | - Shawky A Moustafa
- Department of Bacteriology, Immunology, and Mycology, Faculty of Veterinary Medicine, Benha University, Toukh, Moshtohor, Egypt
| | - Jörg Linde
- Friedrich-Loeffler Institut, Institute for Bacterial Infections and Zoonoses, Jena, Germany
| | - Felix Bartusch
- IT Center (ZDV), High-Performance and Cloud Computing Group, University of Tuebingen, Tuebingen, Germany
| | - Mostafa Y Abdel-Glil
- Friedrich-Loeffler Institut, Institute for Bacterial Infections and Zoonoses, Jena, Germany
| | - Ashraf E Sayour
- Animal Health Research Institute, Agricultural Research Center, Cairo, Egypt
| | - Essam M Elbauomy
- Animal Health Research Institute, Agricultural Research Center, Cairo, Egypt
| | - Mohamed Elhadidy
- Biomedical Sciences Program, University of Science and Technology, Zewail City of Science and Technology, Giza, Egypt.,Department of Bacteriology, Mycology, and Immunology, Faculty of Veterinary Medicine, Mansoura University, Mansoura, Egypt
| | - Falk Melzer
- Friedrich-Loeffler Institut, Institute for Bacterial Infections and Zoonoses, Jena, Germany
| | - Wolfgang Beyer
- Department of Livestock Infectiology and Environmental Hygiene, Institute of Animal Science, University of Hohenheim, Stuttgart, Germany
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Elmonir W, Abdel-Hamid NH, Hamdy MER, Beleta EIM, El-Diasty M, Melzer F, Wareth G, Neubauer H. Isolation and molecular confirmation of Brucella suis biovar 2 from slaughtered pigs: an unanticipated biovar from domestic pigs in Egypt. BMC Vet Res 2022; 18:224. [PMID: 35698071 PMCID: PMC9195200 DOI: 10.1186/s12917-022-03332-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2022] [Accepted: 05/11/2022] [Indexed: 11/10/2022] Open
Abstract
Background Brucella suis is a zoonotic pathogen with a serious impact on public health and the pig industry worldwide. Information regarding B. suis in pigs in Egypt is scarce. This study aimed to investigate the prevalence of B. suis in slaughtered domestic pigs at El-Basatin abattoir in Cairo, Egypt. A total of 1,116 domestic pigs slaughtered in 2020 were sampled for Brucella isolation and identification. Identified Brucella isolates were molecularly confirmed at species, and biovar levels using Bruce ladder PCR and Suis ladder multiplex PCR. Additionally, high-risk practices of 16 abattoir workers (4 veterinarians, 10 butchering and evisceration workers, and 2 scalding workers) were investigated using a pre-piloted structured questionnaire. Results Brucella isolates were recovered from 1.3% of examined pigs (n = 14) at consistently low rates (1.1—2.9%) across the year of sampling from February to December 2020. All isolates were confirmed as B. suis biovar (bv) 2. Remarkably, 92.9% (13/14) of isolates showed atypical ability to produce H2S and hence were considered as B. suis bv2 atypical phenotype. The prevalence was higher in males (1.8%) than in females (0.9). However, this difference was not significant (Odds ratio = 1.9; CI 95% 0.7 – 5.7; P = 0.2). No detectable pathological lesions were associated with B. suis bv2 infection in examined pigs. All strains were isolated from cervical lymph nodes, highlighting a potential oral transmission. High-risk practices were recorded among swine abattoir workers in this study: 75% do not wear gloves or disinfect their knives daily, and 18.8% were willing to work with open wound injuries. Conclusions To the best of our knowledge, this is the first isolation of B. suis bv2 in Egypt. Detection of H2S producing B. suis bv2 atypical phenotype is alarming as it may result in misinterpretation of these isolates as highly human pathogenic B. suis bv1 in Egypt and possibly elsewhere. Further epidemiological tracing studies are crucial for the detection of the origin of this biovar. Including pigs in the national surveillance program of brucellosis, and an education program for swine abattoir workers about occupational risk of B. suis is a need in Egypt. Supplementary Information The online version contains supplementary material available at 10.1186/s12917-022-03332-2.
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Affiliation(s)
- Walid Elmonir
- Department of Hygiene and Preventive Medicine (Zoonoses), Faculty of Veterinary Medicine, Kafrelsheikh University, Kafrelsheikh, Egypt
| | - Nour H Abdel-Hamid
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo, 12618, Egypt
| | - Mahmoud E R Hamdy
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo, 12618, Egypt
| | - Eman I M Beleta
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo, 12618, Egypt
| | - Mohamed El-Diasty
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo, 12618, Egypt
| | - Falk Melzer
- Institute of Bacterial Infections and Zoonosis, Friedrich-Loeffler Institut, Naumburger Str. 96a, 07743, Jena, Germany
| | - Gamal Wareth
- Institute of Bacterial Infections and Zoonosis, Friedrich-Loeffler Institut, Naumburger Str. 96a, 07743, Jena, Germany. .,Department of Bacteriology, Immunology, and Mycology, Faculty of Veterinary Medicine, Benha University, PO Box 13736, Toukh, Moshtohor, Egypt.
| | - Heinrich Neubauer
- Institute of Bacterial Infections and Zoonosis, Friedrich-Loeffler Institut, Naumburger Str. 96a, 07743, Jena, Germany
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Holzer K, El-Diasty M, Wareth G, Abdel-Hamid NH, Hamdy MER, Moustafa SA, Linde J, Bartusch F, Sayour AE, Elbauomy EM, Elhadidy M, Melzer F, Beyer W. Tracking the Distribution of Brucella abortus in Egypt Based on Core Genome SNP Analysis and In Silico MLVA-16. Microorganisms 2021; 9:microorganisms9091942. [PMID: 34576838 PMCID: PMC8469952 DOI: 10.3390/microorganisms9091942] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Revised: 09/01/2021] [Accepted: 09/08/2021] [Indexed: 11/16/2022] Open
Abstract
Brucellosis, caused by the bacteria of the genus Brucella, is one of the most neglected common zoonotic diseases globally with a public health significance and a high economic loss among the livestock industry worldwide. Since little is known about the distribution of B. abortus in Egypt, a total of 46 B. abortus isolates recovered between 2012–2020, plus one animal isolate from 2006, were analyzed by examining the whole core genome single nucleotide polymorphism (cgSNP) in comparison to the in silico multilocus variable number of tandem repeat analysis (MLVA). Both cgSNP analysis and MLVA revealed three clusters and one isolate only was distantly related to the others. One cluster identified a rather widely distributed outbreak strain which is repeatedly occurring for at least 16 years with marginal deviations in cgSNP analysis. The other cluster of isolates represents a rather newly introduced outbreak strain. A separate cluster comprised RB51 vaccine related strains, isolated from aborted material. The comparison with MLVA data sets from public databases reveals one near relative from Argentina to the oldest outbreak strain and a related strain from Spain to a newly introduced outbreak strain in Egypt. The distantly related isolate matches with a strain from Portugal in the MLVA profile. Based on cgSNP analysis the oldest outbreak strain clusters with strains from the UK. Compared to the in silico analysis of MLVA, cgSNP analysis using WGS data provides a much higher resolution of genotypes and, when correlated to the associated epidemiological metadata, cgSNP analysis allows the differentiation of outbreaks by defining different outbreak strains. In this respect, MLVA data are error-prone and can lead to incorrect interpretations of outbreak events.
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Affiliation(s)
- Katharina Holzer
- Department of Livestock Infectiology and Environmental Hygiene, Institute of Animal Science, University of Hohenheim, Garbenstraße 30, 70599 Stuttgart, Germany;
- Correspondence: ; Tel.: +49-711-4592-2428
| | - Mohamed El-Diasty
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (N.H.A.-H.); (M.E.R.H.); (A.E.S.); (E.M.E.)
| | - Gamal Wareth
- Faculty of Veterinary Medicine, Benha University, Moshtohor, Toukh 13736, Egypt; (G.W.); (S.A.M.)
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler Institut, Naumburger Str. 96a, 07743 Jena, Germany; (J.L.); (F.M.)
| | - Nour H. Abdel-Hamid
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (N.H.A.-H.); (M.E.R.H.); (A.E.S.); (E.M.E.)
| | - Mahmoud E. R. Hamdy
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (N.H.A.-H.); (M.E.R.H.); (A.E.S.); (E.M.E.)
| | - Shawky A. Moustafa
- Faculty of Veterinary Medicine, Benha University, Moshtohor, Toukh 13736, Egypt; (G.W.); (S.A.M.)
| | - Jörg Linde
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler Institut, Naumburger Str. 96a, 07743 Jena, Germany; (J.L.); (F.M.)
| | - Felix Bartusch
- High-Performance and Cloud Computing Group, IT Center (ZDV), University of Tuebingen, Waechterstrasse 76, 72074 Tübingen, Germany;
| | - Ashraf E. Sayour
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (N.H.A.-H.); (M.E.R.H.); (A.E.S.); (E.M.E.)
| | - Essam M. Elbauomy
- Agricultural Research Center, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (N.H.A.-H.); (M.E.R.H.); (A.E.S.); (E.M.E.)
| | - Mohamed Elhadidy
- Biomedical Sciences Program, University of Science and Technology, Zewail City of Science and Technology, October Gardens, 6th of October City, Giza 12578, Egypt;
- Department of Bacteriology, Mycology and Immunology, Faculty of Veterinary Medicine, Mansoura University, Mansoura 35516, Egypt
| | - Falk Melzer
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler Institut, Naumburger Str. 96a, 07743 Jena, Germany; (J.L.); (F.M.)
| | - Wolfgang Beyer
- Department of Livestock Infectiology and Environmental Hygiene, Institute of Animal Science, University of Hohenheim, Garbenstraße 30, 70599 Stuttgart, Germany;
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Abdel-Hamid NH, Ghobashy HM, Beleta EI, Elbauomy EM, Ismail RI, Nagati SF, Hassan SK, Elmonir W. Risk factors and Molecular genotyping of Brucella melitensis strains recovered from humans and their owned cattle in Upper Egypt. One Health 2021; 13:100281. [PMID: 34235243 PMCID: PMC8246634 DOI: 10.1016/j.onehlt.2021.100281] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Revised: 06/16/2021] [Accepted: 06/16/2021] [Indexed: 12/02/2022] Open
Abstract
Brucellosis is a zoonosis that has a devastating impact on the economy and public health, particularly in the Middle East, including Egypt. This study aimed to define risk factors associated with brucellosis in humans and in their cattle in Fayoum governorate - Upper Egypt. Also, molecular genotyping of recovered Brucella isolates from human cases and their cattle to assess the potential cross-species transmission in the study region. Data were obtained via double matched case–control studies for brucellosis in humans (106 cases and 160 controls) and in their cattle (78 cattle cases and 105 cattle controls). The results of multivariate regression analysis revealed that predictors of human brucellosis were animal-related occupations (OR 2.1, P 0.02), previous infection in other household members (OR 3.2, P 0.007), eating home-made soft cheese (OR 2.3, P 0.03), and exposure to cattle abortions (OR 6.9, P < 0.001). For cattle, predictors of brucellosis were maturity ≥2 years of age (OR 2.9, P 0.01), ≥2 animals reared by the same household (OR 3.7–6.9, P ≤ 0.001), and recent abortion (OR 15.2, P 0.01). Twelve Brucella isolates were recovered from eight human cases (7.5%, 8/106) and four cattle cases (6.2%, 4/65). All isolates were B. melitensis biovar 3. Analysis of the IS711 gene sequence revealed complete homology (100%) between isolates. Six virulence genes were utilized for virutyping: virB (100%), omp25 (100%), amiC (100%), ure (91.7%), wbkA (91.7%), and bvfA (75%). Virutyping revealed four virutypes: V1 (lack bvfA, 16.7%), V2 (harbored all genes, 66.7%), V3 (lack wbkA, 8.3%), and V4 (lack wbkA and ure, 8.3%). Repetitive extragenic palindromic PCR (REP-PCR) typing revealed two REP types. Combined REP-PCR/virulence genotyping revealed five different genotypes (G1–G5) for the detected isolates and a unique genotype for the reference strain (G6, B. melitensis bv3 Ether). Human and cattle isolates from the same household had matched genotypes. In conclusion, there were widespread risk factors among the cases studied. Health education for high-risk groups is essential for disease prevention, and combined REP-PCR/virulence genotyping is a quick tool for traceability, particularly in developing countries endemic with brucellosis as Egypt. The study highlighted brucellosis risk factors in human & cattle in Upper Egypt. The study recorded widespread risk factors among the cases. Cattle and human isolates in the same household had matched genotypes. REP-PCR/virulence genotyping could facilitate traceability in developing countries.
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Affiliation(s)
- Nour H Abdel-Hamid
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Hazem M Ghobashy
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Eman I Beleta
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Essam M Elbauomy
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Rania I Ismail
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Sultan F Nagati
- Department of Bacteriology, Animal Health Research Institute, Agricultural Research Center, Fayoum, Egypt
| | - Safaa K Hassan
- Department of Public Health and Community Medicine, Faculty of Medicine, Fayoum University, Fayoum, Egypt
| | - Walid Elmonir
- Department of Hygiene and Preventive Medicine (Zoonoses), Faculty of Veterinary Medicine, Kafrelsheikh University, Kafrelsheikh, Egypt
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8
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Hegazy YM, Abdel-Hamid NH, Eldehiey M, Oreiby AF, Algabbary MH, Hamdy MER, Beleta EI, Martínez I, Shahein MA, García N, Eltholth M. Trans-species transmission of Brucellae among ruminants hampering brucellosis control efforts in Egypt. J Appl Microbiol 2021; 132:90-100. [PMID: 34091986 DOI: 10.1111/jam.15173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 05/27/2021] [Accepted: 06/01/2021] [Indexed: 11/28/2022]
Abstract
AIMS This study aimed to identify the genotypic fingerprinting of Brucella melitensis biovar 3 isolates from ruminants in Kafr El-Sheikh, Egypt, to compare with other peers globally and to highlight the epidemiology and potential causes of brucellosis control failure. METHODS AND RESULTS A multilocus variable-number tandem-repeat analysis (MLVA 16) was carried out on 41 B. melitensis bv3 isolates, 31 from the preferential hosts (28 sheep and three goats) and 10 from atypical hosts (nine cattle and one buffalo), identified by bacteriological and molecular techniques. MLVA-16 analysis revealed 19 genotypes with nine as singletons. The most prevalent genotypes were M3_K.E (3,5,3,13,1,1,3,3,7,43,8,7,6,7,5,3), M13_K.E (3,5,3,13,1,1,3,3,7,43,8,5,8,7,7,3) and M5_K.E (3,5,3,13,1,1,3,3,7,43,8,4,8,7,11,3) circulating between different animal species. The B. melitensis isolation from aborted cows in farms that had never reared small ruminants indicates the likelihood of cow to cow B. melitensis transmission. Different genotypes of B. melitensis could be isolated from the same animal. The local geographic distribution of genotypes showed a very close genetic relatedness with genotypes reported outside the study area. Worldwide, our genotypes were mostly related to the Western Mediterranean lineage and less likely to the America's clonal lineage. CONCLUSION There is a high genetic similarity of B. melitensis bv3 genotypes among different ruminant species, and the same animal could be infected with different genotypes. There is a high probability of spreading of B. melitensis among atypical hosts in the absence of the original hosts. The genetic relatedness of B. melitensis bv3 genotypes in the study area with other different geographic areas highlighted the national and international ruminants movement role as a potential factor for maintaining B. melitensis infection. SIGNIFICANCE AND IMPACT OF THE STUDY Further investigations are required to understand the impact of the presence of more than one genotype of B. melitensis in the same animal on the efficacy of brucellosis control strategies.
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Affiliation(s)
- Yamen Mohammed Hegazy
- Animal Medicine Department (Infectious Diseases), Faculty of Veterinary Medicine, Kafrelsheikh University, Kafr El-Sheikh, Egypt
| | - Nour Hosny Abdel-Hamid
- Brucellosis Research Department, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Mohammed Eldehiey
- Brucellosis Research Department, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Atef F Oreiby
- Animal Medicine Department (Infectious Diseases), Faculty of Veterinary Medicine, Kafrelsheikh University, Kafr El-Sheikh, Egypt
| | - Magdy Hasanian Algabbary
- Animal Medicine Department (Infectious Diseases), Faculty of Veterinary Medicine, Kafrelsheikh University, Kafr El-Sheikh, Egypt
| | - Mahmoud E R Hamdy
- Brucellosis Research Department, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Eman Ibrahim Beleta
- Brucellosis Research Department, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Irene Martínez
- VISAVET Health Surveillance Centre, Complutense University of Madrid, Madrid, Spain
| | - Momtaz Abdelhady Shahein
- Brucellosis Research Department, Animal Health Research Institute, Agricultural Research Center, Giza, Egypt
| | - Nerea García
- VISAVET Health Surveillance Centre, Complutense University of Madrid, Madrid, Spain
| | - Mahmoud Eltholth
- Hygiene and Preventive Medicine Department, Faculty of Veterinary Medicine, Kafrelsheikh University, Kafr El-Sheikh, Egypt.,Global Academy of Agriculture and Food Security, The Royal (Dick) School of Veterinary Studies and The Roslin Institute, The University of Edinburgh, Edinburgh, UK
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9
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Abdel-Hamid NH, Beleta EIM, Kelany MA, Ismail RI, Shalaby NA, Khafagi MHM. Validation of real-time polymerase chain reaction versus conventional polymerase chain reaction for diagnosis of brucellosis in cattle sera. Vet World 2021; 14:144-154. [PMID: 33642798 PMCID: PMC7896886 DOI: 10.14202/vetworld.2021.144-154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Accepted: 12/01/2020] [Indexed: 11/16/2022] Open
Abstract
Background and Aim: Different polymerase chain reaction (PCR) techniques have and are still being used for the direct detection of Brucella DNA in serum samples of different animal species and humans without being validated or properly validated, resulting in discrepancies. Thus, this study aimed to evaluate the diagnostic performance of the TaqMan Real-Time-PCR (RT-PCR) targeting the bcsp31 gene versus conventional PCR for the accurate diagnosis of brucellosis at the genus level in cattle sera. Materials and Methods: One hundred and eighty-four serum samples were collected from bacteriologically positive and negative cows with ages ranging from 1 to 5 years old at some infected private farms in the Nile Delta under quarantine measures as well as brucellosis free farms. These samples were classified into four groups after serological diagnosis and investigated by TaqMan RT-PCR and conventional PCR targeting the IS711 gene for Brucella DNA detection. The diagnostic performance characteristics of both PCR techniques were estimated considering the bacteriological results as a gold standard. Results: TaqMan RT-PCR revealed superiority over conventional PCR; it was able to detect Brucella DNA in 95% (67/70) and 89% (25/28) of the cattle sera samples belonging to Group 1 (serologically and bacteriologically positive) and Group 2 (serologically negative but bacteriologically positive), respectively. On evaluating the diagnostic performance, TaqMan RT-PCR showed superior diagnostic sensitivity (93.9%), diagnostic specificity (88.4%), performance index (182.3), almost perfect kappa agreement (0.825±0.042), strong positive correlation (r=0.826), high accuracy based on the receiver operating characteristic (ROC) curve, and area under the ROC curve (0.911) at p<0.05 and CI of 95%. Conclusion: A cattle serum sample is not the metric of choice for targeting Brucella genomic DNA by conventional PCR. The time-saving and rapid TaqMan RT-PCR method revealed a better diagnostic performance in the detection of Brucella DNA in cattle sera. Such performance offered by TaqMan RT-PCR may be considered a step toward the possibility of using such technology in the direct differentiation between Brucella-infected and -vaccinated cattle immunized by smooth vaccines from cattle sera using primers specific for such vaccines.
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Affiliation(s)
- Nour H Abdel-Hamid
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Dokki, Giza 12618, Egypt
| | - Eman I M Beleta
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Dokki, Giza 12618, Egypt
| | - Mohamed A Kelany
- Department of Microbiology, The Central Laboratory of Residue Analysis of Pesticides and Heavy Metals in Food, Agricultural Research Center, Dokki, Giza, Egypt
| | - Rania I Ismail
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Dokki, Giza 12618, Egypt
| | - Nadia A Shalaby
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Dokki, Giza 12618, Egypt
| | - Manal H M Khafagi
- Department of Parasitology and Animal Diseases, National Research Centre, 33 Bohouth St., Dokki, Giza, 12622, Egypt
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10
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Wareth G, El-Diasty M, Melzer F, Schmoock G, Moustafa SA, El-Beskawy M, Khater DF, Hamdy ME, Zaki HM, Ferreira AC, Ekateriniadou LV, Boukouvala E, Abdel-Glil MY, Menshawy AM, Sancho MP, Sakhria S, Pletz MW, Neubauer H. MLVA-16 Genotyping of Brucella abortus and Brucella melitensis Isolates from Different Animal Species in Egypt: Geographical Relatedness and the Mediterranean Lineage. Pathogens 2020; 9:pathogens9060498. [PMID: 32580472 PMCID: PMC7350383 DOI: 10.3390/pathogens9060498] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Revised: 06/16/2020] [Accepted: 06/17/2020] [Indexed: 01/16/2023] Open
Abstract
Brucellosis is a common zoonotic disease in Egypt. However, there are limited data available on the genetic diversity of brucellae circulating in Egypt and other Mediterranean areas. One hundred and nine Brucella (B.) strains were isolated from different animal species in thirteen Egyptian governorates. Multi-locus variable number tandem repeats (VNTRs) analysis (MLVA-16) was employed to determine the geographical relatedness and the genetic diversity of a panel of selected Egyptian strains (n = 69), with strains originating from Italy (n = 49), Portugal (n = 52), Greece (n = 63), and Tunisia (n = 4). Egyptian B. melitensis strains clustered into two main clusters containing 21 genotypes. Egyptian B. abortus strains clustered into three main clusters containing nine genotypes. The genotypes were irregularly distributed over time and space in the study area. Egyptian strains of B. melitensis showed MLVA-16 patterns closer to that of Italian strains. Egyptian B. abortus strains isolated from cattle share the same genotype with strains from Portugal and similar to strains from Italy with low genetic diversity. Strains with similar MLVA patterns isolated from different governorates highlight the movement of the pathogen among governorates. Hence, it may also reflect the long endemicity of brucellosis in Egypt with earlier dispersal of types and great local genetic diversity. Open markets may contribute to cross-species transmission and dissemination of the new types nationwide. The presence of West Mediterranean lineages of B. melitensis and relatedness of B. abortus strains from the studied countries is a result of the socio-historical connections among the Mediterranean countries. Transnational eradication of brucellosis in the Mediterranean basin is highly demanded.
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Affiliation(s)
- Gamal Wareth
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, Naumburger Str. 96a, 07743 Jena, Germany; (F.M.); (G.S.); (M.Y.A.-G.); (H.N.)
- Institute for Infectious Diseases and Infection Control, Jena University Hospital, Am Klinikum 1, 07747 Jena, Germany;
- Faculty of Veterinary Medicine, Benha University, Moshtohor, Toukh 13736, Egypt;
- Correspondence: ; Tel.: +4936418042296
| | - Mohamed El-Diasty
- Department of Brucellosis, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (D.F.K.); (H.M.Z.)
| | - Falk Melzer
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, Naumburger Str. 96a, 07743 Jena, Germany; (F.M.); (G.S.); (M.Y.A.-G.); (H.N.)
| | - Gernot Schmoock
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, Naumburger Str. 96a, 07743 Jena, Germany; (F.M.); (G.S.); (M.Y.A.-G.); (H.N.)
| | - Shawky A. Moustafa
- Faculty of Veterinary Medicine, Benha University, Moshtohor, Toukh 13736, Egypt;
| | - Mohamed El-Beskawy
- Department of Animal Medicine, Faculty of Veterinary Medicine, Matrouh University, Matrouh 51744, Egypt;
| | - Dali F. Khater
- Department of Brucellosis, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (D.F.K.); (H.M.Z.)
| | - Mahmoud E.R. Hamdy
- Department of Brucellosis, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (D.F.K.); (H.M.Z.)
| | - Hoda M. Zaki
- Department of Brucellosis, Animal Health Research Institute, P.O. Box 264-Giza, Cairo 12618, Egypt; (M.E.-D.); (D.F.K.); (H.M.Z.)
| | - Ana Cristina Ferreira
- National Reference Laboratory for Brucellosis, National Institute of Agrarian and Veterinary Research (INIAV, IP), 157 Oeiras, Portugal;
- Faculdade de Ciências, Universidade de Lisboa, Biosystems and Integrative Sciences Institute (BioISI), Edificio TecLabs, Campus da FCUL, Campo Grande, 1749-016 Lisbon, Portugal
| | - Loukia V. Ekateriniadou
- Veterinary Research Institute, Hellenic Agricultural Organization- DEMETER, 54124 Thessaloniki, Greece; (L.V.E.); (E.B.)
| | - Evridiki Boukouvala
- Veterinary Research Institute, Hellenic Agricultural Organization- DEMETER, 54124 Thessaloniki, Greece; (L.V.E.); (E.B.)
| | - Mostafa Y. Abdel-Glil
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, Naumburger Str. 96a, 07743 Jena, Germany; (F.M.); (G.S.); (M.Y.A.-G.); (H.N.)
| | - Ahmed M.S. Menshawy
- Faculty of Veterinary Medicine, Beni-Suef University, Shamlaa Street, Beni-Suef 62511, Egypt;
| | - Marta Pérez Sancho
- Centro VISAVET, Universidad Complutense de Madrid, Avenida Puerta de Hierro, s/n, PC 28040 Madrid, Spain;
- Departamento de Sanidad Animal, Facultad de Veterinaria, Universidad Complutense de Madrid, 28040 Madrid, Spain
| | - Sonia Sakhria
- Institute of Veterinary Research of Tunisia, University of Tunis El Manar, Tunis 1006, Tunisia;
| | - Mathias W. Pletz
- Institute for Infectious Diseases and Infection Control, Jena University Hospital, Am Klinikum 1, 07747 Jena, Germany;
| | - Heinrich Neubauer
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, Naumburger Str. 96a, 07743 Jena, Germany; (F.M.); (G.S.); (M.Y.A.-G.); (H.N.)
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11
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Abdel-Hamid NH, El-Bauomy EM, Ghobashy HM, Shehata AA. Genetic variation of Brucella isolates at strain level in Egypt. Vet Med Sci 2020; 6:421-432. [PMID: 32266769 PMCID: PMC7397911 DOI: 10.1002/vms3.260] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2019] [Revised: 02/11/2020] [Accepted: 03/05/2020] [Indexed: 11/25/2022] Open
Abstract
In this study, Multiple Locus Variable Number Tandem Repeat Analysis (MLVA‐16) was performed on 18 Brucella isolates identified bacteriologically and molecularly (AMOS‐PCR) as Brucella abortus (n = 6) and Brucella melitensis (n = 12). This was aimed to study the genetic association among some Egyptian Brucella genotypes isolated during the period from 2002 to 2013 along with the global genotypes database. MLVA‐16 analysis for B. melitensis and B. abortus strains illustrates a total of 11, and 3 genotypes with 10 and 1 singleton genotypes, respectively. B. melitensis strains displayed greater markers diversity by VNTRs analysis of the 16 loci than B. abortus and this was attributed mainly to the diverging in panel 2B markers. B. melitensis genotype M4_Fayoum_Giza (3,5,3,13,1,1,3,3,8,21,8,7,5,9,5,3) was the only predominated genotype circulating between two different governorates. The most common B. abortus genotype, GT A3_Dakahlia (4,5,4,12,2,2,3,3,6,21,8,4,4,3,4,4), was present in three identical isolates. In phylogeny, Egyptian B. abortus bv1 genotypes were closely related to East Asian strain (for the first time), Western Mediterranean and Americas clonal lineages. B. melitensis local genotypes exhibit a genetic relatedness mostly to Western Mediterranean clonal lineage and one strain of Eastern Mediterranean clonal lineage. In conclusion, the geographic location is not the only factor stands behind the high genetic similarity of the Egyptian Brucella genotypes. These low variations may be a result of a stepwise mutational event of the most variable loci from a very limited number of ancestors especially during the transmission through non‐preference hosts. The authors encourage the authorities in charge to establish pre‐movement testing to reduce the risk of brucellosis spread.
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Affiliation(s)
- Nour H Abdel-Hamid
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Dokki, Egypt
| | - Essam M El-Bauomy
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Dokki, Egypt
| | - Hazem M Ghobashy
- Department of Brucellosis Research, Animal Health Research Institute, Agricultural Research Center, Giza, Dokki, Egypt
| | - Abeer A Shehata
- Fayoum Regional Laboratory, Animal Health Research Institute, Agricultural Research Center, Fayoum, Egypt
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