Molpro: a general-purpose quantum chemistry program package

Ab initio exploration of low-lying electronic states of linear and bent MNX+ (M = Ca, Sr, Ba, Ra; X = O, S, Se, Te, Po) and their origins

High-level multireference and coupled cluster quantum calculations were employed to analyze low-lying electronic states of linear-MNX+ and side-bonded-M[NX]+ (M = Ca, Sr, Ba, Ra; X = O, S, Se, Te, Po) species. Their full potential energy curves (PECs), dissociation energies (Des), geometric parameters, excitation energies (Tes), and harmonic vibrational frequencies (ωes) are reported. The first three chemically bound electronic states of MNX+ and M[NX]+ are 3∑-, 1Δ, 1∑+ and 3A″, 1A', 1A″, respectively. The 3∑-, 1Δ, 1∑+ of MNX+ originate from the M+(2D) + NX(2Π) fragments, whereas the 3A″, 1A', 1A″ states of M[NX]+ dissociate to M+(2S) + NX(2Π) as a result of avoided crossings. The MNX+ and M[NX]+ are real minima on the potential energy surface and their interconversions are possible. The M2+NX-/M2+[NX]- ionic structure is an accurate representation for their low-lying electronic states. The Des of MNX+ species were found to depend on the dipole moment (μ) of the corresponding NX ligands and a linear relationship between these two parameters was observed.

Intermolecular interaction energies with AROFRAG-A systematic approach for fragmentation of aromatic molecules

Intermolecular interactions with polycyclic aromatic hydrocarbons (PAHs) represent an important area of physisorption studies. These investigations are often hampered by a size of interacting PAHs, which makes the calculation prohibitively expensive. Therefore, methods designed to deal with large molecules could be helpful to reduce the computational costs of such studies. Recently we have introduced a new systematic approach for the molecular fragmentation of PAHs, denoted as AROFRAG, which decomposes a large PAH molecule into a set of predefined small PAHs with a benzene ring being the smallest unbreakable unit, and which in conjunction with the Molecules-in-Molecules (MIM) approach provides an accurate description of total molecular energies. In this contribution we propose an extension of the AROFRAG, which provides a description of intermolecular interactions for complexes composed of PAH molecules. The examination of interaction energy partitioning for various test cases shows that the AROFRAG3 model connected with the MIM approach accurately reproduces all important components of the interaction energy. An additional important finding in our study is that the computationally expensive long-range electron-correlation part of the interaction energy, that is, the dispersion component, is well described at lower AROFRAG levels even without MIM, which makes the latter models interesting alternatives to existing methods for an accurate description of the electron-correlated part of the interaction energy.

Anion photoelectron spectroscopy and chemical bonding of ThS2- and ThSO

Anion photoelectron spectra of ThSO- and ThS2- were recorded using the third (355 nm) harmonic of an Nd-YAG laser; these provided the measured vertical detachment energies of each anion. The experiments are supported by extensive coupled cluster calculations on ThSO, ThSO-, ThS2, and ThS2-, as well as the oxygen congeners ThO2 and ThO2-. The ab initio calculations, which included complete basis set extrapolations, spin-orbit effects using four-component coupled cluster, and higher-order correlation contributions through CCSDT(Q), yielded an adiabatic electron affinity for ThO2 that was within 0.02 eV of the previously determined experimental value. The singly occupied molecular orbital (SOMO) in all three anions corresponds primarily to the 7s orbital on Th. Successive substitution of S for each O in ThO2 leads to larger electron affinities and smaller bond angles in the neutral molecules, but larger angles in the anions. As demonstrated by Franck-Condon simulations of the spectra using the CCSD(T) spectroscopic constants, substitution of O by S significantly complicates the resulting detachment spectra due to the lower vibrational frequencies in the sulfur species. Overall the calculated vertical detachment energies are in very good agreement with the experiment. In addition to the adiabatic electron affinities of each species, atomization energies and heats of formation have also been determined via the FPD approach with expected uncertainties of 1-2 kcal/mol.

Dynamics of FHCl Including Two Bidirectional Dissociation Channels: Comparative Study Using Quantum Nuclear Wavepackets and Semiclassical Trajectory Surface Hopping

The dynamics starting from the charge transfer excited state of neutral FHCl includes two bidirectional dissociation channels, producing "FH" and "Cl" fragments or "F" and "HCl" fragments by electron-transfer (ET) or proton-transfer (PT) processes, respectively. The quantum features of its dynamics were studied using the quantum dynamics of nuclear wavepacket propagation and the semiclassical dynamics of trajectory surface hopping propagation. The MS-CASPT2(17,11)/aug-cc-pVTZ method was used for calculating the energies of electronic states. Two critical quantum features identified in previous studies were the dominance of PT over ET and the ∼80 fs time gap between the onset of the earlier PT and the later ET processes. These features, in contrast to classical anticipation, were confirmed again, and their classical interpretations were developed based on the results of semiclassical dynamics. The relative location of nonadiabatic regions with respect to the starting point of dynamics and the activation of angular motion altering the HFCl angle play crucial roles in governing the two quantum features.

Chemical Bond Energies of Organic Peroxides: From CH3OOCH3 to High-Molecular-Weight Industrially Significant Compounds

Peroxides are of some importance in a number of industrial areas, as well as in atmospheric and low-temperature combustion chemistries. Although there are some organic peroxides that are powerful explosives, such as hexamethylene triperoxide diamine, their principal use is as initiators in polymerization reactions in the plastics and rubber industries since the O-O bond is easily cleaved to generate two reactive free radicals. This gives rise to concern about safety issues in both the manufacture of and the deployment of these compounds since they are strong oxidizers. A measure of these safety concerns can be achieved by determining the chemical bond energy or bond dissociation energy (BDE) for the following process: R-O-O-R' → RO• + R'O• since those with very weak O-O bonds are most likely to be problematic. We have used the midlevel model chemistry G4 to compute the BDE of a number of organic peroxides ranging from the simplest dialkyl peroxide to diacyl, peroxy ester, and peroxycarbonate peroxides. In addition, we have used much higher levels of theory to benchmark the chemical bond energy of dimethyl peroxide in the expectation that this will anchor all future determinations.

Anisole-Water and Anisole-Ammonia Complexes in Ground and Excited (S1) States: A Multiconfigurational Symmetry-Adapted Perturbation Theory (SAPT) Study

Binary complexes of anisole have long been considered paradigm systems for studying microsolvation in both the ground and electronically excited states. We report a symmetry-adapted perturbation theory (SAPT) analysis of intermolecular interactions in anisole-water and anisole-ammonia complexes within the framework of the multireference SAPT(CAS) method. Upon the S1 ← S0 electronic transition, the hydrogen bond in the anisole-water dimer is weakened, which SAPT(CAS) shows to be determined by changes in the electrostatic energy. As a result, the water complex becomes less stable in the relaxed S1 state despite decreased Pauli repulsion. Stronger binding of the anisole-ammonia complex following electronic excitation is more nuanced and results from counteracting shifts in the repulsive (exchange) and attractive (electrostatic, induction and dispersion) forces. In particular, we show that the formation of additional binding N-H···π contacts in the relaxed S1 geometry is possible due to reduced Pauli repulsion in the excited state. The SAPT(CAS) interaction energies have been validated against the coupled cluster (CC) results and experimentally determined shifts of the S1 ← S0 anisole band. While for the hydrogen-bonded anisole-water dimer SAPT(CAS) and CC shifts are in excellent agreement, for ammonia SAPT(CAS) is only qualitatively correct.

A multiphoton ionisation photoelectron imaging study of thiophene

Thiophene is a prototype for the excited state photophysics that lies at the heart of many technologies within the field of organic electronics. Here, we report a multiphoton ionisation photoelectron imaging study of gas-phase thiophene using a range of photon energies to excite transitions from the ground electronic state to the first two electronically excited singlet states, from the onset of absorption to the absorption maximum. Analysis of the photoelectron spectra and angular distributions reveal features arising from direct photoionisation from the ground electronic state, and resonance-enhanced photoionisation via the electronically excited singlet states. The first two ionisation energies from the ground electronic state were confirmed to be 8.8 eV (adiabatic) and 9.6 eV (vertical). The ionisation energies from the first two electronically excited singlet states were found to be 3.7 eV (adiabatic) and 4.4 eV (vertical).

Parallel Implementation of the Density Matrix Renormalization Group Method Achieving a Quarter petaFLOPS Performance on a Single DGX-H100 GPU Node

We report cutting edge performance results on a single node hybrid CPU-multi-GPU implementation of the spin adapted ab initio Density Matrix Renormalization Group (DMRG) method on current state-of-the-art NVIDIA DGX-H100 architectures. We evaluate the performance of the DMRG electronic structure calculations for the active compounds of the FeMoco, the primary cofactor of nitrogenase, and cytochrome P450 (CYP) enzymes with complete active space (CAS) sizes of up to 113 electrons in 76 orbitals [CAS(113, 76)] and 63 electrons in 58 orbitals [CAS(63, 58)], respectively. We achieve 246 teraFLOPS of sustained performance, an improvement of more than 2.5× compared to the performance achieved on the DGX-A100 architectures and an 80× acceleration compared to an OpenMP parallelized implementation on a 128-core CPU architecture. Our work highlights the ability of tensor network algorithms to efficiently utilize high-performance multi-GPU hardware and shows that the combination of tensor networks with modern large-scale GPU accelerators can pave the way toward solving some of the most challenging problems in quantum chemistry and beyond.

Massive Assessment of the Geometries of Atmospheric Molecular Clusters

Atmospheric molecular clusters are important for the formation of new aerosol particles in the air. However, current experimental techniques are not able to yield direct insight into the cluster geometries. This implies that to date there is limited information about how accurately the applied computational methods depict the cluster structures. Here we massively benchmark the molecular geometries of atmospheric molecular clusters. We initially assessed how well different DF-MP2 approaches reproduce the geometries of 45 dimer clusters obtained at a high DF-CCSD(T)-F12b/cc-pVDZ-F12 level of theory. Based on the results, we find that the DF-MP2/aug-cc-pVQZ level of theory best resembles the DF-CCSD(T)-F12b/cc-pVDZ-F12 reference level. We subsequently optimized 1283 acid-base cluster structures (up to tetramers) at the DF-MP2/aug-cc-pVQZ level of theory and assessed how more approximate methods reproduce the geometries. Out of the tested semiempirical methods, we find that the newly parametrized atmospheric molecular cluster extended tight binding method (AMC-xTB) is most reliable for locating the correct lowest energy configuration and yields the lowest root mean square deviation (RMSD) compared to the reference level. In addition, we find that the DFT-3c methods show similar performance as the usually employed ωB97X-D/6-31++G(d,p) level of theory at a potentially reduced computational cost. This suggests that these methods could prove to be valuable for large-scale screening of cluster structures in the future.

Dissociative Electron Attachment Dynamics of a Promising Cancer Drug Indicates Its Radiosensitizing Potential

2-Bromo-1-(3,3-dinitroazetidin-1-yl)ethan-1-one (RRx-001) is a hypoxic cell chemotherapeutics with already demonstrated synergism in combined chemo-radiation therapy. The interaction of the compound with secondary low-energy electrons formed in large amounts during the physico-chemical phase of the irradiation may lead to these synergistic effects. The present study focuses on the first step of RRx-001 interaction with low-energy electrons in which a transient anion is formed and fragmented. Combination of two experiments allows us to disentangle the decay of the RRx-001 anion on different timescales. Sole presence of the electron initiates rapid dissociation of NO2 and HNO2 neutrals while NO2 - and Br- anions are produced both directly and via intermediate complexes. Based on our quantum chemical calculations, we propose that bidirectional state switching between π*(NO2) and σ*(C-Br) states explains the experimental spectra. The fast dynamics monitored will impact the condensed phase chemistry of the anion as well.

Dynamic Jahn-Teller effect in the strong spin-orbit coupling regime

Exotic quantum phases, arising from a complex interplay of charge, spin, lattice and orbital degrees of freedom, are of immense interest to a wide research community. A well-known example of such an entangled behavior is the Jahn-Teller effect, where the lifting of orbital degeneracy proceeds through lattice distortions. Here we demonstrate that a highly-symmetrical 5d1 double perovskite Ba2MgReO6, comprising a 3D array of isolated ReO6 octahedra, represents a rare example of a dynamic Jahn-Teller system in the strong spin-orbit coupling regime. Thermodynamic and resonant inelastic x-ray scattering experiments, supported by quantum chemistry calculations, undoubtedly show that the Jahn-Teller instability leads to a ground-state doublet, resolving a long-standing puzzle in this family of compounds. The dynamic state of ReO6 octahedra persists down to the lowest temperatures, where a multipolar order sets in, allowing for investigations of the interplay between a dynamic JT effect and strongly correlated electron behavior.

The Bond Energy of the Carbon Skeleton in Polyaromatic Halohydrocarbon Molecules

We have investigated the thermochemical stability of the carbon skeleton in polycyclic aromatic (halo) hydrocarbons using a systematic collection of molecules (the PAHH343 set). With high-level quantum chemistry methods such as W1X-2, we have obtained chemically accurate (i. e.,±~5 kJ mol-1) "normalized carbon skeleton" bond energies. They are calculated by removing the C-H and C-X (X=F, Cl) bond energies from the total atomization energy, and then normalizing on a per-carbon basis. For species with isomeric halogen-substitution pattern, the energetic variation is generally small, though larger difference can also be seen due to structural distortion from steric repulsion. The skeleton energy becomes smaller with an increasing number of halogen atoms due to the withdrawal of electron density from the bonding orbitals, mainly through the σ-bonds. We have further assessed the performance of some low-cost quantum chemistry methods for the PAHH343 set. The deviations from reference values are largely systematic, and can thus be compensated for, yielding errors that are on average below 10 kJ mol-1. This provides the prospect for the study of an even wider range of PAHH and related systems.

Theoretical Kinetics of Radical-Radical Reaction NH2ṄH + ṄH2 and Its Implications for Monomethylhydrazine Pyrolysis Mechanism

Significant discrepancies were observed between the experiments and the simulations for ṄH2 time-histories in monomethylhydrazine pyrolysis with the robust mechanism proposed by Pascal and Catoire. The rate of formation analyses for ṄH2 indicated the significance of the reaction NH2ṄH + ṄH2 = H2NN + NH3, which has not been well-defined. In this study, ab initio calculations were performed for the theoretical description of the NH2ṄH + ṄH2 chemistry. Most stationary points on the potential energy surface were quantified at the CCSD(T)/CBS//M06-2X/aug-cc-pVTZ level, and the multireference methods were employed for barrier-less reaction and some transition states. The temperature- and pressure-dependent rate coefficients were determined using classical and microcanonical variational transition state theories. Four primary reaction channels were identified as competitive: 1) The H atom abstraction reaction yielding N2H2(T) + NH3, dominating at 1350-3000 K across the 0.001-100 atm pressure range. 2) The H atom abstraction reaction forming N2H2(S) + NH3, dominating at 800-1350 K and competing with the processes of chemical activation and collisional stabilization below 800 K. 3) The chemical-activated reaction resulting in H2NN(S) + NH3, dominating below 800 K at 0.001 atm. 4) The collisional-stabilized recombination reaction leading to N3H5, becoming significant as pressure increases and dominating below 600 and 650 K at 1 and 100 atm, respectively. The implications of newly calculated NH2ṄH + ṄH2 kinetics for the monomethylhydrazine pyrolysis mechanism were evaluated, and updates were implemented. Sensitivity analyses indicated the necessity of additional research efforts to comprehend the dynamics of CH3NH2 unimolecular and N2H2 + ṄH2 reaction systems. The rate coefficients presented in this study can be employed to develop the chemical kinetic model of nitryl-containing systems.

Heavy-Atom Tunneling in Ring-Closure Reactions of Beryllium Ozonide Complexes

Quantum mechanical tunneling (QMT) has long been recognized as crucial for understanding chemical reaction mechanisms, particularly in reactions involving light atoms like hydrogen. However, recent findings have expanded this understanding to include heavy-atom tunneling reactions. In this report, we present the observation of two heavy-atom tunneling reactions involving the spontaneous conversions from end-on bonded beryllium ozonide complexes, OBeOOO (A) and BeOBeOOO (C), to their corresponding side-on bonded ozonide isomers, OBe(η2-O3) (B) and BeOBe(η2-O3) (D), respectively, in a cryogenic neon matrix. This discovery is supported by the weak temperature dependence of the rate constants and unusually large 16O/18O kinetic isotope effects. Quantum chemistry calculations reveal extremely low barriers (<1 kcal/mol) for both ring-closure reactions. Additionally, instanton theory calculations on both reactions unveil that the tunneling processes involve the concerted motion of all four oxygen atoms.

Unraveling Chain Branching in Cool Flames

In cool flames, autoxidation of organic compounds forms alkyl hydroperoxides and ketohydroperoxides, and this controls the critical rate of chain branching, but there have been large uncertainties in the decomposition rate constants. We synthesized a series of hydroperoxides and measured their decomposition rate constants in pyrolysis experiments by spray-vaporization jet-stirred-reactor synchrotron vacuum ultraviolet photoionization mass spectrometry. Structural variation of the hydroperoxides, including alkyl, cycloalkyl, aromatic, and heterocyclic functionalities, has only a slight effect on their decomposition rate constants. Calculated rate constants are in good agreement with the experiment. The rate constant of ketohydroperoxide decomposition was obtained by theoretical calculation of 3-hydroperoxy butanal and tested by the pyrolysis of synthesized 3-hydroperoxy-3-phenylpropionate. The rate constant of ketohydroperoxide decomposition is close to that of alkyl hydroperoxides. The new chain-branching rate constants improves the cool-flame kinetic model, which is essential for removing discrepancies in model predictions and for the design of high-efficiency and low-emission engines.

Dynamical electron correlation and the chemical bond. III. Covalent bonds in the A2 molecules (A = C-F)

For most molecules the spin-coupled generalized valence bond (SCGVB) wavefunction accounts for the effects of non-dynamical electron correlation. The remaining errors in the prediction of molecular properties and the outcomes of molecular processes are then solely due to dynamical electron correlation. In this article we extend our previous studies of the effects of dynamical electron correlation on the potential energy curves and spectroscopic constants of the AH and AF (A = B-F) molecules to the homonuclear diatomic molecules, A2 (A = C-F). At large R the magnitude of ΔEDEC(R), the correlation energy of the molecule relative to that in the atoms, increases nearly exponentially with decreasing R, just as we found in the AH and AF molecules. But, as R continues to decrease the rate of increase in the magnitude of ΔEDEC(R) slows, eventually leading to a minimum for C2-O2. Examination of the SCGVB wavefunction for the N2 molecule around the minimum in ΔEDEC(R) did not reveal a clear cause for this puzzling behavior. As before, the changes in ΔEDEC(R) around Re were found to have an uneven effect on the spectroscopic constants of the A2 molecules.

A new ground electronic state potential energy surface of HeLiH+: Analytical representation and investigation of the dynamics of He + LiH+ (v = 0, j = 0) → LiHe+ + H reaction

An improved global potential energy surface (PES) for the electronic ground state of the HeLiH+ system is reported. The data points are calculated at the full configuration-interaction level of theory and extrapolated to the complete basis set limit. The fitting procedure implements a combination of neural network and Aguado-Paniagua functional forms to fit the ab initio data points. The fitted surface reproduces the ab initio data points accurately in short as well as long ranges and has an overall root mean square error of 1.76 × 10-3 eV (14.21 cm-1) in energy space <10 and 9.28 × 10-4 eV (7.48 cm-1) upto 2 eV. The optimized global minimum is also accurately reproduced using the fitted surface. To establish the accuracy of the new PES, dynamics investigation of the He + LiH+(v = 0, j = 0) → LiHe+ + H reaction is performed using the Coriolis coupled quantum mechanical and quasi-classical trajectory methods. The results, such as integral cross sections and rate constants, show the effect of the opening of the collision-induced dissociation (CID) channel at low collision energy and are significantly different from the earlier study of Tacconi et al. [Phys. Chem. Chem. Phys. 14, 637-645 (2012)]. These discrepancies appear to be a result of the treatment of the CID channel in the dynamics calculations, which is excluded from the reactive channel in the current work.

Analytical potential energy functions for CO + in its ground and excited electronic states

CONTEXT

Accurate functions to analytically represent the potential energy interactions of CO+ diatomic system inX 2 Σ + ,A 2 Π , andB 2 Σ + electronic states are proposed. The new functions depend upon only four parameters directly obtained from experimental data, without any fitting procedure. These functions have been developed from the modified generalized potential proposed by Araújo and Ballester. The function for theX 2 Σ + electronic state represents a significant improvement to the previously proposed model. To quantify the accuracy of the potential energy functions, the Lippincont test is used. The novel potential was also compared with the classical Morse potential and with the recently proposed Improved Generalized Pöschl-Teller potential. Furthermore, the main spectroscopic constants and vibrational energy levels are calculated and compared for all potentials. The present results agree excellently with the experiment Rydberg-Klein-Rees (RKR) potentials.

METHODS

The rovibrational energy levels of the proposed diatomic potentials were asserted by solving radial the Schrödinger equation of the nuclear motion with the aid of the LEVEL program.

CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed

Since its inception nearly a half century ago, CHARMM has been playing a central role in computational biochemistry and biophysics. Commensurate with the developments in experimental research and advances in computer hardware, the range of methods and applicability of CHARMM have also grown. This review summarizes major developments that occurred after 2009 when the last review of CHARMM was published. They include the following: new faster simulation engines, accessible user interfaces for convenient workflows, and a vast array of simulation and analysis methods that encompass quantum mechanical, atomistic, and coarse-grained levels, as well as extensive coverage of force fields. In addition to providing the current snapshot of the CHARMM development, this review may serve as a starting point for exploring relevant theories and computational methods for tackling contemporary and emerging problems in biomolecular systems. CHARMM is freely available for academic and nonprofit research at https://academiccharmm.org/program.

Vibrational and Rovibrational Spectroscopic Data for the Ground and First-Excited States of Phosgene (COCl2), Formic Acid (HCOOH), and Chloroformic Acid (ClCOOH)

While "black box" quantum chemical computations for the determination of rovibronic spectral data are not quite at hand, the present work utilizes the titular molecules to showcase how excited-state quantum chemical methods can be conjoined to quartic force field (QFF) anharmonic rovibrational treatments to provide novel and useful predictions for such data. This work employs hybrid QFFs with explicitly correlated coupled cluster theory along with the equation-of-motion formalism to generate harmonic force constants and time-dependent density functional theory (TD-DFT) to produce anharmonic force constants for the generation of electronically excited-state rovibrational spectral data, in effect, rovibronic spectral data. Specific spectroscopic results from this work show that the fundamental C═O stretch in phosgene as well as in cis- and trans-formic acid drop from the region of around 1800 cm-1 to close to 1100 cm-1 or less in the first excited states of each molecule. While such is expected for these n → π* excitations, this work provides quantitative predictions for these fundamental vibrational frequencies. The most notable theoretical result is that the TD-DFT-based QFFs can experience unexpected failures, and their inclusion in excited-state hybrid QFFs should require at least two functionals to be employed. The computation of DFT QFFs is relatively fast, and such a "doubling up" of the QFFs will not greatly increase the computational time.

Fulminic acid: a quasibent spectacle

Fulminic acid (HCNO) played a critical role in the early development of organic chemistry, and chemists have sought to discern the structure and characteristics of this molecule and its isomers for over 200 years. The mercurial nature of the extremely flat H-C-N bending potential of fulminic acid, with a nearly vanishing harmonic vibrational frequency at linearity, remains enigmatic and refractory to electronic structure theory, as dramatic variation with both orbital basis set and electron correlation method is witnessed. To solve this problem using rigorous electronic wavefunction methods, we have employed focal point analyses (FPA) to ascertain the ab initio limit of optimized linear and bent geometries, corresponding vibrational frequencies, and the HCN + O(3P) → HCNO reaction energy. Electron correlation treatments as extensive as CCSDT(Q), CCSDTQ(P), and even CCSDTQP(H) were employed, and complete basis set (CBS) extrapolations were performed using the cc-pCVXZ (X = 4-6) basis sets. Core electron correlation, scalar relativistic effects (MVD1), and diagonal Born-Oppenheimer corrections (DBOC) were all included and found to contribute significantly in determining whether vibrationless HCNO is linear or bent. At the all-electron (AE) CCSD(T)/CBS level, HCNO is a linear molecule with ω5(H-C-N bend) = 120 cm-1. However, composite AE-CCSDT(Q)/CBS computations give an imaginary frequency (51i cm-1) at the linear optimized geometry, leading to an equilibrium structure with an H-C-N angle of 173.9°. Finally, at the AE-CCSDTQ(P)/CBS level, HCNO is once again linear with ω5 = 45 cm-1, and inclusion of both MVD1 and DBOC effects yields ω5 = 32 cm-1. A host of other topics has also been investigated for fulminic acid, including the dependence of re and ωi predictions on a variety of CBS extrapolation formulas, the question of multireference character, the N-O bond energy and enthalpy of formation, and issues that give rise to the quasibent appellation.

Photoisomerization mechanism of iminoguanidinium receptors from spectroscopic methods and quantum chemical calculations

The hydrazone functional group, when coupled with a pyridyl substituent, offers a unique class of widely tunable photoswitches, whose E-to-Z photoisomerization equilibria can be controlled through intramolecular hydrogen bonding between the N-H hydrazone donor and the pyridyl acceptor. However, little is known about the photoisomerization mechanism in this class of compounds. To address this issue, we report a pyridine-appended iminoguanidinium photoswitch that is functionally related to acylhydrazones and provides insight into the photoisomerization processes between the E and Z configurations. The E-to-Z photoisomerization of the E-2-pyridyl-iminoguanidinium cation (2PyMIG) in DMSO, prepared as the bromide salt, was quantified by 1H NMR, and probed in real time with ultrafast laser spectroscopy. The photoisomerization process occurs on a picosecond timescale, resulting in low fluorescence yields. The multiconfigurational reaction path found with the growing string method features a small barrier (4.3 or 6.5 kcal mol-1) that the E isomer in the π-π* state must overcome to reach the minimum energy conical intersection (MECI) connecting the E and Z isomers of 2PyMIG. While two possible pathways exist depending on the orientation of the pyridine ring, both exhibit the same qualitative features along the path and at their MECIs, involving simultaneous changes in the CCNN and CNNC dihedral angles. Furthermore, the ground state barrier for pyridine ring rotation is readily accessible, thus a low barrier pathway to the experimentally observed Z isomer exists for both MECIs leading to a transition from the E isomer to photoproduct. Combining multiconfigurational reaction path calculations using growing string method with time-resolved fluorescence spectroscopy provided crucial insights into the photoisomerization process of 2PyMIG, resulting in both the computational and experimental results pointing to rapid photoisomerization via a surface crossing between the singlet π-π* and the ground states.

Restriction on molecular fluxionality by substitution: A case study for the 1,10-dicyanobullvalene

We show herein that 1,10-dicyano substitution restricts the paragon fluxionality of bullvalene to just 14 isomers which isomerize along a single cycle. The restricted fluxionality of 1,10-dicyanobullvalene (DCB) is investigated by means of: (i) Bonding analyses of the isomer structures using the adaptive natural density partitioning (AdNDP). (ii) Quantum dynamical simulations of the isomerizations along the cyclic intrinsic reaction coordinate of the potential energy surface (PES). The PES possesses 14 equivalent potential wells supporting 14 isomers which are separated by 14 equivalent potential barriers supporting 14 transition states. Accordingly, at low temperatures, DCB appears as a hindered molecular rotor, without any delocalization of the wavefunction in the 14 potential wells, without any nuclear spin isomers, and with completely negligible tunneling. These results are compared and found to differ from those for molecular boron rotors. (iii) Born-Oppenheimer molecular dynamics (BOMD) simulations of thermally activated isomerizations. (iv) Calculations of the rate constants in the frame of transition state theory (TST) with reasonable agreement achieved with the BOMD results. (v) Simulations of the equilibration dynamics using rate equations for the isomerizations with TST rate coefficients. Accordingly, in the long-time limit, isomerizations of the 14 isomers, each with Cs symmetry, approach the "14 Cs → C7v" thermally averaged structure. This is a superposition of the 14 equally populated isomer structures with an overall C7v symmetry. By extrapolation, the results for DCB yield working hypotheses for so far un-explored properties e.g. for the equilibration dynamics of C10H10.

Comprehensive computational automated search of barrierless reactions leading to the formation of benzene and other C6-membered rings

We present the systematic exploration of various potential energy surfaces for systems with C6H6-x (x = 0, 1, 2, or 3) empirical formula using an automatic search approach. The primary objective of this study is to identify reaction pathways that lead to the creation of benzene, o-benzyne, and other rings. These pathways initiate with a barrierless recombination reaction and involve subsequent isomerization reactions with submerged transition states until the final product is reached. The reported reaction profiles are consistent with the existing conditions in the interstellar medium if the hot complex formed can cool down through radiative relaxation. Recent studies on the deactivation of polyaromatic hydrocarbons (PAHs) support the possibility of these reactions taking place. The C6-membered rings are considered precursors of PAHs, and our focus is on identifying pathways originating from the barrierless recombination of reactive molecules known to exist in the interstellar medium, with potential implications in other environments.

Effect of Protein-Polarized Ligand Charges on Relative Protein Ligand Binding Affinities

A major challenge in computer-aided drug design is predicting relative binding energies of different molecules to a target protein using fast and accurate free-energy calculation methods. Free-energy calculations are primarily computed by utilizing classical molecular dynamics simulations based on all-atom force fields (FF) to model the interactions in the system. The present standard classical all-atom FFs contain fixed partial charges on the atoms, and hence electrostatic interactions are modeled between them. The parametrization process to determine these partial charges usually relies on quantum mechanics or semiempirical calculations of the molecule in the gas phase or homogeneous water surrounding. These present standard parametrization schemes of the partial charges neglect, therefore, polarization effects from the protein surrounding. The absence of protein polarization effects can lead to significant errors in free-energy calculations in proteins. We present a parametrization scheme for the partial charges of ligands, named protein-induced polarization (PIP) charges, which account for the electrostatic polarization due to the protein surrounding. The scheme involves single-point quantum mechanics/molecular mechanics calculations of the ligand charges in the protein/water surrounding. Using PIP ligand partial charges, we have calculated the relative binding free energies (RBFEs) of well-studied protein-ligand systems. We show here that RBFEs computed with PIP charges are either significantly improved or at least comparable to those computed with nonpolarized standard GAFF charges. Overall, we present a simple-to-use parametrization scheme to include protein polarization in any type of binding free-energy calculations. The parametrization scheme increases the accuracy in RBFE calculations, while it does not add significant computation time to standard parametrization procedures.

Water-carbon disulfide dimers: observation of a new isomer and ab initio structure theory

The weakly bound dimer water-carbon disulfide is studied by ab initio structure theory and high-resolution infrared spectroscopy. The calculations yield three stable minima in the potential energy surface, all planar. The most stable, isomer 1, was observed previously by microwave spectroscopy. It has C2v symmetry, an S-O bond, and a linear O-S-C-S backbone. Isomer 2, the next most stable, has not been considered previously by theory or experiment. It also has C2v symmetry, but with a side-by-side structure. Isomer 3, which is slightly less stable, is side-by-side with one O-H bond pointing toward an S atom. The first gas phase water-CS2 infrared spectra are reported. For isomer 1, H2O-, HDO-, and D2O-CS2 are observed in the CS2ν1 + ν3 region, H2O-CS2 in the H2O ν2 bend region, and D2O-CS2 in the D2O ν1 and ν3 stretch regions. The latter ν3 spectrum enables an experimental determination of the A rotational parameter, which turns out to be larger than expected. The new isomer 2 is observed by means of a band in the H2O ν2 region, confirming its C2v symmetry and calculated structure.

Unveiling the Mechanism of Plasmon Photocatalysis via Multiquantum Vibrational Excitation

Plasmon photocatalysis reactions are thought to occur through vibrationally activated reactants, driven by nonthermal energy transfer from plasmon-induced hot carriers. However, a detailed quantum-state-level understanding and quantification of the activation have been lacking. Using anti-Stokes surface-enhanced Raman scattering (SERS) spectroscopy, we mapped the vibrational population distributions of reactants on plasmon-excited nanostructures. Our results reveal a highly nonthermal distribution with an anomalously enhanced population of multiquantum excited states  (v ≥ 2). The shape of the distribution and its dependence on local field intensity and excitation wavelength cannot be explained by photothermal heating or vibronic optical transitions of the metal-molecule complex. Instead, it can be modeled by hot electron-molecule energy transfer mediated by the transient negative ions, establishing direct links among nonthermal reactant activation, plasmon-induced hot electrons, and negative ion resonances. Moreover, the presence of multiquantum excited reactants, which are far more reactive than those in the ground state or first excited state, presents opportunities for vibrationally controlling chemical selectivities.

Similarities and Differences of Hydridic and Protonic Hydrogen Bonding

Ab initio calculations were employed to investigate the interactions between selected electron-donating groups, characterized by M-H bonds (where M represents a transition metal and H denotes a hydridic hydrogen), and electron-accepting groups featuring both σ- and π-holes. The study utilized the ωB97X-D3BJ/def2-TZVPPD level of theory. Hydridic hydrogen complexes were found in all complexes with σ- and π-holes. A comparative analysis was conducted on the properties hydridic H-bond complexes, presented here and those studied previously, alongside an extended set of protonic H-bonds complexes. While the stabilization energies changes in M-H bond lengths, vibrational frequencies, intensities of the spectral bands, and charge transfer for these complexes are comparable, the nature of hydridic and protonic H-bonds fundamentally differ. In protonic H-bond complexes, the main stabilization forces arise from electrostatic contributions, while in hydridic H-bond complexes, dispersion energy, is the primary stabilization factor due to the excess of electrons and thus larger polarizability at hydridic H. The finding represents an important characteristic that distinguishes hydridic H-bonding from protonic H-bonds.

Theoretical Rotational and Vibrational Spectral Data for the Hypermagnesium Oxide Species Mg2O and Mg2O. Chemphyschem 2024;25:e202400479. [PMID: 38801234 DOI: 10.1002/cphc.202400479] [Citation(s) in RCA: 0] [Impact Index Per Article: 0]

While magnesium is astronomically observed in small molecules, it largely serves as a contributor to silicate grains, though how these grains form is not well-understood. The smallest hypermagnesium oxide compounds (Mg2 ${{}_{2}}$ O/Mg2 ${{}_{2}}$ O+ ${{}^{+}}$ ) may play a role in silicate formation, but little vibrational reference data exist. As such, anharmonic spectroscopic data are computed forX ˜ 1 Σ g + ${{{\tilde{\rm {X}}}}^1 {\rm{\Sigma }}_g^+ }$ Mg2 ${{}_{2}}$ O,a ˜ 1 Σ u + ${{{\tilde{\rm {a}}}}^1 {\rm{\Sigma }}_u^+ }$ Mg2 ${{}_{2}}$ O, andX ˜ 2 Σ g + ${{{\tilde{\rm {X}}}}^2 {\rm{\Sigma }}_g^+ }$ Mg2 ${{}_{2}}$ O+ ${{}^{+}}$ using quartic force fields (QFFs). Explicitly-correlated coupled-cluster QFFs for the neutral species perform well, implying that full multireference treatment may not be necessary for such systems if enough electron correlation is included. Equation-of-motion ionization potential (EOMIP) methods forX ˜ 2 Σ g + ${{{\tilde{\rm {X}}}}^2 {\rm{\Sigma }}_g^+ }$ Mg2 ${{}_{2}}$ O+ ${{}^{+}}$ QFFs circumvent previous symmetry breaking issues even in explicitly-correlated coupled-cluster results, motivating the need for EOMIP treatments at minimum for such systems. All three species are found to have high-intensity vibrational frequencies. Even so, the highly intense frequency (X ˜ 1 Σ g + ${{{\tilde{\rm {X}}}}^1 {\rm{\Sigma }}_g^+ }$ Mg2 ${{}_{2}}$ O: 894.7 cm-1/11.18 μm;a ˜ 1 Σ u + ${{{\tilde{\rm {a}}}}^1 {\rm{\Sigma }}_u^+ }$ Mg2 ${{}_{2}}$ O: 915.0 cm-1/10.91 μm) for either neutral state may be astronomically obscured by the polycyclic aromatic hydrocarbon 11.2 μm band. Mg2 ${{}_{2}}$ O+ ${{}^{+}}$ may be less susceptible to such obfuscation, and itsν 1 ${{\nu }_{1}}$ intensity is computed to be a massive 4793 km mol-1.

Comparative Study of Neutral and Cationic Sn2H2: Toward Laboratory Detection of the Cation

Group 14 M2H2 isomers (M = Si, Ge, Sn, and Pb) have attracted interest due to their radically differing electronic structures from acetylene. To better understand the Sn-H interactions of the neutral and cationic Sn2H2 structures, we present the most rigorous study of these systems to date. CCSD(T)/cc-pwCVTZ harmonic frequencies are presented as the first predictions for the neutral and cationic species to date. CCSDT(Q)/CBS relative energies are reported using the focal point approach, confirming the butterfly isomer as the global minimum on the potential energy surface for both the neutral and cationic species. In all, there exist 7 minima and 15 transition states. NBO analysis is also performed to elucidate the changes in bond order going from neutral to cation across all isomers of Sn2H2. Our results provide insights into the important Sn-H interaction and provide guidance for future work that may detect S n 2 H 2 + in the laboratory for the first time.

Surface hopping molecular dynamics simulation of ultrafast methyl iodide photodissociation mapped by Coulomb explosion imaging

We present a highly efficient approach to directly and reliably simulate photodissociation followed by Coulomb explosion of methyl iodide. In order to achieve statistical reliability, more than 40 000 trajectories are calculated on accurate potential energy surfaces of both the neutral molecule and the doubly charged cation. Non-adiabatic effects during photodissociation are treated using a Landau-Zener surface hopping algorithm. The simulation is performed analogous to a recent pump-probe experiment using coincident ion momentum imaging [Ziaee et al., Phys. Chem. Chem. Phys., 2023, 25, 9999-10010]. At large pump-probe delays, the simulated delay-dependent kinetic energy release signals show overall good agreement with the experiment, with two major dissociation channels leading to I(2P3/2) and I*(2P1/2) products. At short pump-probe delays, the simulated kinetic energy release differs significantly from the values obtained by a purely Coulombic approximation or a one-dimensional description of the dicationic potential energy surfaces, and shows a clear bifurcation near 12 fs, owing to non-adiabatic transitions through a conical intersection. The proposed approach is particularly suitable and efficient in simulating processes that highly rely on statistics or for identifying rare reaction channels.

Scattering resonances in the rotational excitation of HDO by Ne and normal-H2: theory and experiment

The rotational excitation of a singly deuterated water molecule (HDO) by a heavy atom (Ne) and a light diatomic molecule (H2) is investigated theoretically and experimentally in the near-threshold regime. Crossed-molecular-beam measurements with a variable crossing angle are compared to close-coupling calculations based on high-accuracy potential energy surfaces. The two lowest rotational transitions, 000 → 101 and 000 → 111, are probed in detail and a good agreement between theory and experiment is observed for both transitions in the case of HDO + Ne, where scattering resonances are however blurred out experimentally. In the case of HDO + H2, the predicted theoretical overlapping resonances are faithfully reproduced by experiment for the 000 → 111 transition, while the calculated strong signal for the 000 → 101 transition is not detected. Future work is needed to reconcile this discrepancy.

Inelastic scattering of NO(A2Σ+) + CO2: rotation-rotation pair-correlated differential cross sections

A crossed beam velocity-map ion-imaging apparatus has been used to determine differential cross sections (DCSs) for the rotationally inelastic scattering of NO(A2Σ+, v = 0, j = 0.5) with CO2, as a function of both NO(A, v = 0, N') final state and the coincident final rotational energy of the CO2. The DCSs are dominated by forward-peaked scattering for all N', with significant rotational excitation of CO2, and a small backward scattered peak is also observed for all final N'. However, no rotational rainbow scattering is observed and there is no evidence for significant product rotational angular momentum polarization. New ab initio potential energy surface calculations at the PNO-CCSD(T)-F12b level of theory report strong attractive forces at long ranges with significant anisotropy relative to both NO and CO2. The absence of rotational rainbow scattering is consistent with removal of low-impact-parameter collisions via electronic quenching, in agreement with the literature quenching rates of NO(A) by CO2 and recent electronic structure calculations. We propose that high-impact-parameter collisions, that do not lead to quenching, experience strong anisotropic attractive forces that lead to significant rotational excitation in both NO and CO2, depolarizing product angular momentum while leading to forward and backward glory scattering.

Intersystem Crossing Control of the Nb+ + CO2 → NbO+ + CO Reaction

The transfer of an oxygen atom from carbon dioxide (CO2) to a transition metal cation in the gas phase offers atomic level insights into single-atom catalysis for CO2 activation. Given that these reactions often involve open-shell transition metals, they may proceed through intersystem crossing between different spin manifolds. However, a definitive understanding of such spin-forbidden reaction requires dynamical calculations on multiple global potential energy surfaces (PESs) coupled by spin-orbit couplings. In this work, we report global PESs and spin-orbit couplings for three low-lying spin (quintet, triplet, and singlet) states for the reaction between the niobium cation (Nb+) and CO2, which are used to investigate the nonadiabatic reaction dynamics and kinetics. Comparison with experimental data of kinetics and collision dynamics shows satisfactory agreement. This reaction is found to be very similar to that between Ta+ + CO2. Specifically, our theoretical findings suggest that the rate-limiting step in this reaction is intersystem crossing, rather than potential barriers.

Self-Adapting Short-Range Correlation Functional for Complete Active Space-Based Approximations

We propose a short-range correlation energy correction tailored for active space wave function models. The correction relies on a short-range multideterminant correlation functional computed with a local range-separation parameter that self-adapts to the underlying wave function. This approach is analogous to that of Giner et al. [J. Chem. Phys. 2018, 149, 194301] which addresses the basis set incompleteness error, with the vital distinction that in our protocol the range-separation parameter remains finite in the complete basis set limit, ensuring nonzero short-range correlation. The proposed correlation functional compensates for the missing short-range correlation via two mechanisms: (i) an automatically adapting short-range parameter, which gauges the missing correlation in the electron vicinity, and (ii) the functional's explicit dependence on the on-top pair density, which reduces short-range correlation in regions where electron correlation is mainly static. We integrate our method into the multireference adiabatic connection theory for CASSCF wave functions. The performance of the introduced CAS-AC0-(c,md) model is verified by calculating potential energy curves for alkaline-earth metal dimers (Be2, Mg2, Ca2) and for the chromium dimer, in all cases obtaining promising results.

Renormalized Internally Contracted Multireference Coupled Cluster with Perturbative Triples

In this work, we combine the many-body formulation of the internally contracted multireference coupled cluster (ic-MRCC) method with Evangelista's multireference formulation of the driven similarity renormalization group (DSRG). The DSRG method can be viewed as a unitary multireference coupled cluster theory, which renormalizes the amplitudes based on a flow equation approach to eliminate numerical instabilities. We extend this approach by demonstrating that the unitary flow equation approach can be adapted for nonunitary transformations, rationalizing the renormalization of ic-MRCC amplitudes. We denote the new approach, the renormalized ic-MRCC (ric-MRCC) method. To achieve high accuracy with a reasonable computational cost, we introduce a new approximation to the Baker-Campbell-Hausdorff expansion. We fully consider the linear commutator while approximating the quadratic commutator, for which we neglect specific contractions involving amplitudes with active indices. Moreover, we introduce approximate perturbative triples to obtain the ric-MRCCSD[T] method. We demonstrate the accuracy of our approaches in comparison to advanced multireference methods for the potential energy curves of H8, F2, H2O, N2, and Cr2. Additionally, we show that ric-MRCCSD and ric-MRCSSD[T] match the accuracy of CCSD(T) for evaluating spectroscopic constants and of full configuration interaction energies for a set of small molecules.

Systematic improvement of empirical energy functions in the era of machine learning

The impact of targeted replacement of individual terms in empirical force fields is quantitatively assessed for pure water, dichloromethane (CH  2 Cl  2 ), and solvated K  + and Cl  - ions. For the electrostatic interactions, point charges (PCs) and machine learning (ML)-based minimally distributed charges (MDCM) fitted to the molecular electrostatic potential are evaluated together with electrostatics based on the Coulomb integral. The impact of explicitly including second-order terms is investigated by adding a fragment molecular orbital (FMO)-derived polarization energy to an existing force field, in this case CHARMM. It is demonstrated that anisotropic electrostatics reduce the RMSE for water (by 1.4 kcal/mol), CH  2 Cl  2 (by 0.8 kcal/mol) and for solvated Cl  - clusters (by 0.4 kcal/mol). An additional polarization term can be neglected for CH  2 Cl  2 but further improves the models for pure water (by ∼ 1.0 kcal/mol) and hydrated Cl  - (by 0.4 kcal/mol), and is key for solvated K  + , reducing the RMSE by 2.3 kcal/mol. A 12-6 Lennard-Jones functional form performs satisfactorily with PC and MDCM electrostatics, but is not appropriate for descriptions that account for the electrostatic penetration energy. The importance of many-body contributions is assessed by comparing a strictly 2-body approach with self-consistent reference data. Two-body interactions suffice for CH  2 Cl  2 whereas water and solvated K  + and Cl  - ions require explicit many-body corrections. Finally, a many-body-corrected dimer potential energy surface exceeds the accuracy attained using a conventional empirical force field, potentially reaching that of an FMO calculation. The present work systematically quantifies which terms improve the performance of an existing force field and what reference data to use for parametrizing these terms in a tractable fashion for ML fitting of pure and heterogeneous systems.

Formation of S-Bearing Complex Organic Molecules in Interstellar Clouds via Ice Reactions with C2H2, HS, and Atomic H

The chemical network governing interstellar sulfur has been the topic of unrelenting discussion for the past few decades due to the conspicuous discrepancy between its expected and observed abundances in different interstellar environments. More recently, the astronomical detections of CH3CH2SH and CH2CS highlighted the importance of interstellar formation routes for sulfur-bearing organic molecules with two carbon atoms. In this work, we perform a laboratory investigation of the solid-state chemistry resulting from the interaction between C2H2 molecules and SH radicals-both thought to be present in interstellar icy mantles-at 10 K. Reflection absorption infrared spectroscopy and quadrupole mass spectrometry combined with temperature-programmed desorption experiments are employed as analytical techniques. We confirm that SH radicals can kick-start a sulfur reaction network under interstellar cloud conditions and identify at least six sulfurated products: CH3CH2SH, CH2CHSH, HSCH2CH2SH, H2S2, and tentatively CH3CHS and CH2CS. Complementarily, we utilize computational calculations to pinpoint the reaction routes that play a role in the chemical network behind our experimental results. The main sulfur-bearing organic molecule formed under our experimental conditions is CH3CH2SH, and its formation yield increases with the ratios of H to other reactants. It serves as a sink to the sulfur budget within the network, being formed at the expense of the other unsaturated products. The astrophysical implications of the chemical network proposed here are discussed.

Rotational dynamics of CNCN by p-H2 and o-H2 collision at interstellar temperatures

The rotational dynamics of isocyanogen (CNCN) is studied for its collision with para (p-) and ortho (o-) hydrogen (H2) in the temperature range of 1-100 K. These temperatures correspond to the cold dense molecular clouds in the interstellar medium where molecular hydrogen is the primary collider. An ab initio 4D potential energy surface (PES) is constructed keeping the two molecules under rigid rotor approximation. The PES is generated using the CCSD(T)-F12b/AVTZ level of theory. The 4D PES is further fitted into a neural network (NN) model, which can augment the surface and account for missing data points within spectroscopic accuracy. This NN-fitted PES is then expanded over a bispherical harmonics function to get radial terms, which are expressed into analytic functions. Thereafter, the cross sections (σ) are computed for rotational transitions of CNCN (j → j') using the close-coupling and centrifugal sudden methods for both p-H2 (jc = 0) and o-H2 (jc = 1) collision till 194 cm-1. In addition, p-H2 (jc = 0, 2) cross sections are also computed using the centrifugal sudden approximation method. The collisional rates are achieved by taking the Boltzmann distribution of σ over the translational energy of H2 till 100 K. Finally, the CNCN-H2 rates are compared to CNCN-He and NCCN-H2 collisional rates. Comparing even and odd transitions for the CNCN-H2 rates show a propensity toward higher rates for even transitions especially for o-H2 collisions considering low-order transitions.

Zero-Point-Energy Driven Isotopic Exchange of the [H3O]- anion Probed by Mid-Infrared Action Spectroscopy

We present the first observation of vibrational transitions in the [H3O]- anion, an intermediate in the anion-molecule reaction of water, H2O, and hydride, H-, using a laser-induced isotopic H/D exchange reaction action spectroscopy scheme applied to anions. The observed bands are assigned as the fundamental and first overtone of the H2O-H- vibrational stretching mode, based on anharmonic calculations within the vibrational perturbation theory and vibrational configuration interaction. Although the D2O·D- species has the lowest energy, our experiments confirm the D2O·H- isotope to be a sink of the H/D exchange reaction. Ab initio calculations corroborate that the formation of D2O·H- is favored, as the zero-point-energy difference is larger between D2 and H2 than between D2O·H- and D2O·D-.

Fitting of Coupled Potential Energy Surfaces via Discovery of Companion Matrices by Machine Intelligence

Fitting coupled potential energy surfaces is a critical step in simulating electronically nonadiabatic chemical reactions and energy transfer processes. Analytic representation of coupled potential energy surfaces enables one to perform detailed dynamics calculations. Traditionally, fitting is performed in a diabatic representation to avoid fitting the cuspidal ridges of coupled adiabatic potential energy surfaces at conical intersection seams. In this work, we provide an alternative approach by carrying out fitting in the adiabatic representation using a modified version of the Frobenius companion matrices, whose usage was first proposed by Opalka and Domcke. Their work involved minimizing the errors in fits of the characteristic polynomial coefficients (CPCs) and diagonalizing the resulting companion matrix, whose eigenvalues are adiabatic potential energies. We show, however, that this may lead to complex eigenvalues and spurious discontinuities. To alleviate this problem, we provide a new procedure for the automatic discovery of CPCs and the diagonalization of a companion matrix by using a special neural network architecture. The method effectively allows analytic representation of global coupled adiabatic potential energy surfaces and their gradients with only adiabatic energy input and without experience-based selection of a diabatization scheme. We demonstrate that the new procedure, called the companion matrix neural network (CMNN), is successful by showing applications to LiH, H3, phenol, and thiophenol.

The role of solar photolysis in the atmospheric removal of methacrolein oxide and the methacrolein oxide-water van-der Waals complex in pristine environments

Biogenic hydrocarbons are emitted into the Earth's atmosphere by terrestrial vegetation as by-products of photosynthesis. Isoprene is one such hydrocarbon and is the second most abundant volatile organic compound emitted into the atmosphere (after methane). Reaction with ozone represents an important atmospheric sink for isoprene removal, forming carbonyl oxides (Criegee intermediates) with extended conjugation. In this manuscript, we argue that the extended conjugation of these Criegee intermediates enables electronic excitation of these compounds, on timescales that are competitive with their slow unimolecular decay and bimolecular chemistry. We show that the complexation of methacrolein oxide with water enhances the absorption cross section of the otherwise dark S1 state, potentially revealing a new avenue for forming lower volatility compounds via tropospherically relevant photochemistry.

Precision Measurement of the Electron Affinity of Chlorine via High-Resolution Photoelectron Spectroscopy

Chlorine (Cl2) is a diatomic molecule used as an important industrial gas. However, the electron affinity (EA) of Cl2, a fundamental parameter for understanding chemical reactions, has no accurate experimental result available. The latest result of the EA value of Cl2 is 2.50(20) eV reported in 1983. In the present work, we report the precision measurement of the EA of Cl2 with the successive difference method via the high-resolution photoelectron spectroscopy of cryogenically cold chlorine anions Cl2-. The EA of Cl2 is determined to be 19432(9) cm-1 or 2.4093(11) eV.

The Complex (Organic) Puzzle of the Formation of Hydrogen Cyanide and Isocyanide on Interstellar Ice Analogues

Aiming to constrain the surface formation of HCN and HNC in the dense interstellar medium on ice-covered dust grains, we investigate the interaction of CN radicals with H2O and CO ices and their subsequent reactivity with H and H2. CN radicals can physisorb on both ices. However, on H2O ice, a hemibond formation is the most common binding mode, while on CO ice, the CN-CO van der Waals complex can form NCCO with a small energy barrier. We show low barrier or barrierless pathways to the formation of HCN and HNC for the reaction H + CN on both ices. Reactivity with H2 involves activation energy barriers to form HCN, which may be overcome by quantum tunneling, while HNC formation is unlikely. The formation of HCN and HNC competes with the formation of NH2CHO on H2O and HCOCN on CO.

Experimental and Theoretical Study of the Reaction of F2 with Thiirane

The kinetics of the F2 reaction with thiirane (C2H4S) was studied for the first time in a flow reactor combined with mass spectrometry at a total helium pressure of 2 Torr and in the temperature range of 220 to 800 K. The rate constant of the title reaction was determined under pseudo-first-order conditions, either monitoring the kinetics of F2 or C2H4S consumption in excess of thiirane or of F2, respectively: k1 = (5.79 ± 0.17) × 10-12 exp(-(16 ± 10)/T) cm3 molecule-1 s-1 (the uncertainties represent precision of the fit at the 2σ level, with the total 2σ relative uncertainty, including statistical and systematic errors on the rate constant being 15% at all temperatures). HF and CH2CHSF were identified as primary products of the title reaction. The yield of HF was measured to be 100% (with an accuracy of 10%) across the entire temperature range of the study. Quantum computations revealed reaction enthalpies ranging from -409.9 to -509.1 kJ mol-1 for all the isomers/conformers of the products, indicating a strong exothermicity. Boltzmann relative populations were then established for different temperatures.

Theoretical Study of Ground-State Barium-Rare Gas Van der Waals Complexes: Combining Rule Modeling and Ab Initio Calculations

The present study aims to generate the potential energy curves (PECs) and spectroscopic constants for barium alkaline earth (AE) atoms interacting with rare gas (RG) atoms (He, Ne, Ar, Kr, and Xe). The study focuses on investigating the van der Waals bonds that characterize the interactions between alkaline-earth metals and RG atoms, with a specific emphasis on employing the Tang and Toennies (TT) potential model, known to accurately describe such interactions. The TT potential model was employed in conjunction with combining rules to calculate its parameters, which include dispersion coefficients C 2n and Born-Mayer constants A and b. Additionally, we have conducted high-level ab initio calculations at the CCSD(T) level for all Ba-RG ground states. Obtained PECs from both methods have been used to evaluate the spectroscopic properties D e, R e, ωe, B e, and ωeχe. Our findings reveal that the derived spectroscopic constants from the TT model exhibit good agreement with the results obtained from CCSD(T) calculations and with other available theoretical studies. Furthermore, to gain insights into the relative differences among AE-RG species, we calculated the κ parameter for AE-RG and AE+-RG (AE = Sr, Ca, Mg, Ba; RG = He-Xe) complexes. It is found that except for the case of Ba-RG and Ba+-RG, the κ values within the same series, AE-RG and AE+-RG, are remarkably close to each other.

InnTl4-nH+ (n = 0∼4): Tetracoordinate Hydrogen in a Planar Fashion?

The recent report of planar tetracoordinate hydrogen (ptH) in In4H+ is very intriguing in planar hypercoordinate chemistry. Our high-level CCSD(T) calculations revealed that the proposed D4h-symmetric ptH In4H+ is a first-order saddle point with an imaginary frequency in the out-of-plane mode of the hydrogen atom. In fact, at the CCSD(T)/aug-cc-pV5Z/aug-cc-pV5Z-PP level, the C4v isomer, with the H atom located 0.70 Å above the In4 plane, is 0.5 kcal/mol more stable than the D4h isomer. However, given the small perturbation from planarity and essentially barrierless C4v ↔ D4h ↔ C4v transition, the vibrationally averaged structure can still be considered as a planar. Extending our exploration to the InnTl4-nH+ (n = 0-3) systems, we found all these ptH structures, except for In2Tl2H+, to be the putative global minimum. The single σ-delocalized interaction between the central hydrogen atom and InnTl4-n ligand rings proves pivotal in establishing planarity and aromaticity and conferring substantial stability upon these rule-breaking ptH species.

Photodissociation spectra of single trapped CaOH+ molecular ions

Molecular ions that are generated by chemical reactions with trapped atomic ions can serve as an accessible testbed for developing molecular quantum technologies. On the other hand, they are also a hindrance to scaling up quantum computers based on atomic ions, as unavoidable reactions with background gases destroy the information carriers. Here, we investigate the single- and two-photon dissociation processes of single CaOH+ molecular ions co-trapped in Ca+ ion crystals using a femtosecond laser system. We report the photodissociation cross section spectra of CaOH+ for single-photon processes at λ = 245-275 nm and for two-photon processes at λ = 500-540 nm. Measurements are interpreted with quantum-chemical calculations, which predict the photodissociation threshold for CaOH+ → Ca+ + OH at 265 nm. This result can serve as a basis for dissociation-based spectroscopy for studying the internal structure of CaOH+. The result also gives a prescription for recycling Ca+ ions in large-scale trapped Ca+ quantum experiments from undesired CaOH+ ions formed in the presence of background water vapor.

Extending the Tavis-Cummings model for molecular ensembles-Exploring the effects of dipole self-energies and static dipole moments

Strong coupling of organic molecules to the vacuum field of a nanoscale cavity can be used to modify their chemical and physical properties. We extend the Tavis-Cummings model for molecular ensembles and show that the often neglected interaction terms arising from the static dipole moment and the dipole self-energy are essential for a correct description of the light-matter interaction in polaritonic chemistry. On the basis of a full quantum description, we simulate the excited-state dynamics and spectroscopy of MgH+ molecules resonantly coupled to an optical cavity. We show that the inclusion of static dipole moments and the dipole self-energy is necessary to obtain a consistent model. We construct an efficient two-level system approach that reproduces the main features of the real molecular system and may be used to simulate larger molecular ensembles.

Dynamical Electron Correlation and the Chemical Bond. IV. Covalent Bonds in A2 Molecules (A = N-As and F-Br)

In a series of recent papers, we investigated the effect of dynamical electron correlation on the potential energy curves and spectroscopic constants of several diatomic molecules, including the simple diatomic hydrides (AH) and the more complex diatomic fluorides (AF) and homonuclear diatomic molecules (A2) with A = B-F (AF) or A = C-F (A2), respectively. Our goal was to understand the dependence of the dynamical electron correlation energy, EDEC, on the internuclear distance, R, and quantify how dynamical electron correlation influences the spectroscopic constants (De, Re, and ωe) of these molecules. At large R, we found that the magnitude of EDEC(R) had a simple dependence on R, with EDEC(R) increasing nearly exponentially with decreasing R. However, as R continued to decrease, there were significant variations in EDEC(R). These variations led to differing changes in the predicted spectroscopic constants of the molecules. In many molecules, the changes in EDEC(R) could be correlated with changes in the underlying spin-coupled generalized valence bond wave function, either in the orbitals or the spin-coupling coefficients. In the current paper, we extend these studies to higher main group elements, comparing the effects of EDEC(R) on P2 and As2 versus N2, and on Cl2 and Br2 versus F2. We find that there are significant differences between the effects of dynamical electron correlation on the molecules in the first and subsequent rows of the periodic table.