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Read ML, Berry SC, Graham KS, Voets NL, Zhang J, Aggleton JP, Lawrence AD, Hodgetts CJ. Scene-selectivity in CA1/subicular complex: Multivoxel pattern analysis at 7T. Neuropsychologia 2024; 194:108783. [PMID: 38161052 DOI: 10.1016/j.neuropsychologia.2023.108783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Revised: 12/21/2023] [Accepted: 12/27/2023] [Indexed: 01/03/2024]
Abstract
Prior univariate functional magnetic resonance imaging (fMRI) studies in humans suggest that the anteromedial subicular complex of the hippocampus is a hub for scene-based cognition. However, it is possible that univariate approaches were not sufficiently sensitive to detect scene-related activity in other subfields that have been implicated in spatial processing (e.g., CA1). Further, as connectivity-based functional gradients in the hippocampus do not respect classical subfield boundary definitions, category selectivity may be distributed across anatomical subfields. Region-of-interest approaches, therefore, may limit our ability to observe category selectivity across discrete subfield boundaries. To address these issues, we applied searchlight multivariate pattern analysis to 7T fMRI data of healthy adults who undertook a simultaneous visual odd-one-out discrimination task for scene and non-scene (including face) visual stimuli, hypothesising that scene classification would be possible in multiple hippocampal regions within, but not constrained to, anteromedial subicular complex and CA1. Indeed, we found that the scene-selective searchlight map overlapped not only with anteromedial subicular complex (distal subiculum, pre/para subiculum), but also inferior CA1, alongside posteromedial (including retrosplenial) and parahippocampal cortices. Probabilistic overlap maps revealed gradients of scene category selectivity, with the strongest overlap located in the medial hippocampus, converging with searchlight findings. This was contrasted with gradients of face category selectivity, which had stronger overlap in more lateral hippocampus, supporting ideas of parallel processing streams for these two categories. Our work helps to map the scene, in contrast to, face processing networks within, and connected to, the human hippocampus.
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Affiliation(s)
- Marie-Lucie Read
- Cardiff University Brain Research Imaging Centre, School of Psychology, Cardiff University, Maindy Road, Cardiff, CF24 4HQ, UK
| | - Samuel C Berry
- Cardiff University Brain Research Imaging Centre, School of Psychology, Cardiff University, Maindy Road, Cardiff, CF24 4HQ, UK; Department of Psychology, Royal Holloway, University of London, Egham, Surrey, TW20 0EX, UK
| | - Kim S Graham
- School of Philosophy, Psychology and Language Sciences, Dugald Stewart Building, University of Edinburgh, 3 Charles Street, Edinburgh, EH8 9AD, UK
| | - Natalie L Voets
- Wellcome Centre for Integrative Neuroimaging, FMRIB Building, John Radcliffe Hospital, Oxford, OX3 9DU2, UK
| | - Jiaxiang Zhang
- Cardiff University Brain Research Imaging Centre, School of Psychology, Cardiff University, Maindy Road, Cardiff, CF24 4HQ, UK; School of Mathematics and Computer Science, Swansea University, Swansea SA1 8DD, UK
| | - John P Aggleton
- Cardiff University Brain Research Imaging Centre, School of Psychology, Cardiff University, Maindy Road, Cardiff, CF24 4HQ, UK
| | - Andrew D Lawrence
- Cardiff University Brain Research Imaging Centre, School of Psychology, Cardiff University, Maindy Road, Cardiff, CF24 4HQ, UK; School of Philosophy, Psychology and Language Sciences, Dugald Stewart Building, University of Edinburgh, 3 Charles Street, Edinburgh, EH8 9AD, UK
| | - Carl J Hodgetts
- Cardiff University Brain Research Imaging Centre, School of Psychology, Cardiff University, Maindy Road, Cardiff, CF24 4HQ, UK; Department of Psychology, Royal Holloway, University of London, Egham, Surrey, TW20 0EX, UK.
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Effects of neuromodulation-inspired mechanisms on the performance of deep neural networks in a spatial learning task. iScience 2023; 26:106026. [PMID: 36818295 PMCID: PMC9929609 DOI: 10.1016/j.isci.2023.106026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 11/18/2022] [Accepted: 01/19/2023] [Indexed: 01/25/2023] Open
Abstract
In recent years, the biological underpinnings of adaptive learning have been modeled, leading to faster model convergence and various behavioral benefits in tasks including spatial navigation and cue-reward association. Furthermore, studies have investigated how the neuromodulatory system, a major driver of synaptic plasticity and state-dependent changes in the brain neuronal activities, plays a role in training deep neural networks (DNNs). In this study, we extended previous studies on neuromodulation-inspired DNNs and explored the effects of neuromodulatory components on learning and single unit activities in a spatial learning task. Under the multiscale neuromodulatory framework, plastic components, dropout probability modulation, and learning rate decay were added to the single unit, layer, and whole network levels of DNN models, respectively. We observed behavioral benefits including faster learning and smaller error of ambulation. We then concluded that neuromodulatory components can affect learning trajectories, outcomes, and single unit activities, in a component- and hyperparameter-dependent manner.
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Takamura R, Mizuta K, Sekine Y, Islam T, Saito T, Sato M, Ohkura M, Nakai J, Ohshima T, Saido TC, Hayashi Y. Modality-Specific Impairment of Hippocampal CA1 Neurons of Alzheimer's Disease Model Mice. J Neurosci 2021; 41:5315-5329. [PMID: 33980545 PMCID: PMC8211543 DOI: 10.1523/jneurosci.0208-21.2021] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Revised: 04/10/2021] [Accepted: 04/23/2021] [Indexed: 11/21/2022] Open
Abstract
Impairment of episodic memory, a class of memory for spatiotemporal context of an event, is an early symptom of Alzheimer's disease. Both spatial and temporal information are encoded and represented in the hippocampal neurons, but how these representations are impaired under amyloid β (Aβ) pathology remains elusive. We performed chronic imaging of the hippocampus in awake male amyloid precursor protein (App) knock-in mice behaving in a virtual reality environment to simultaneously monitor spatiotemporal representations and the progression of Aβ depositions. We found that temporal representation is preserved, whereas spatial representation is significantly impaired in the App knock-in mice. This is because of the overall reduction of active place cells, but not time cells, and compensatory hyperactivation of remaining place cells near Aβ aggregates. These results indicate the differential impact of Aβ aggregates on two major modalities of episodic memory, suggesting different mechanisms for forming and maintaining these two representations in the hippocampus.
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Affiliation(s)
- Risa Takamura
- Department of Pharmacology, Kyoto University Graduate School of Medicine, Kyoto 606-8501, Japan
- Department of Life Science and Medical Bioscience, Graduate School of Advanced Science and Engineering, Waseda University, Tokyo 162-8480, Japan
- Center for Brain Science, RIKEN, Saitama 351-0198, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
| | - Kotaro Mizuta
- Department of Pharmacology, Kyoto University Graduate School of Medicine, Kyoto 606-8501, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
| | - Yukiko Sekine
- Center for Brain Science, RIKEN, Saitama 351-0198, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
| | - Tanvir Islam
- Center for Brain Science, RIKEN, Saitama 351-0198, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
| | - Takashi Saito
- Center for Brain Science, RIKEN, Saitama 351-0198, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
| | - Masaaki Sato
- Center for Brain Science, RIKEN, Saitama 351-0198, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
- Brain and Body System Science Institute, Saitama University, Saitama 338-8570, Japan
| | - Masamichi Ohkura
- Brain and Body System Science Institute, Saitama University, Saitama 338-8570, Japan
| | - Junichi Nakai
- Brain and Body System Science Institute, Saitama University, Saitama 338-8570, Japan
| | - Toshio Ohshima
- Department of Life Science and Medical Bioscience, Graduate School of Advanced Science and Engineering, Waseda University, Tokyo 162-8480, Japan
| | - Takaomi C Saido
- Center for Brain Science, RIKEN, Saitama 351-0198, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
| | - Yasunori Hayashi
- Department of Pharmacology, Kyoto University Graduate School of Medicine, Kyoto 606-8501, Japan
- Brain Science Institute, RIKEN, Saitama 351-0198, Japan
- Brain and Body System Science Institute, Saitama University, Saitama 338-8570, Japan
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Zakharov I, Tabueva A, Adamovich T, Kovas Y, Malykh S. Alpha Band Resting-State EEG Connectivity Is Associated With Non-verbal Intelligence. Front Hum Neurosci 2020; 14:10. [PMID: 32116601 PMCID: PMC7010914 DOI: 10.3389/fnhum.2020.00010] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2019] [Accepted: 01/13/2020] [Indexed: 01/05/2023] Open
Abstract
The aim of the present study was to investigate whether EEG resting state connectivity correlates with intelligence. One-hundred and sixty five participants took part in the study. Six minutes of eyes closed EEG resting state was recorded for each participant. Graph theoretical connectivity metrics were calculated separately for two well-established synchronization measures [weighted Phase Lag Index (wPLI) and Imaginary Coherence (iMCOH)] and for sensor- and source EEG space. Non-verbal intelligence was measured with Raven's Progressive Matrices. In line with the Neural Efficiency Hypothesis, path lengths characteristics of the brain networks (Average and Characteristic Path lengths, Diameter and Closeness Centrality) within alpha band range were significantly correlated with non-verbal intelligence for sensor space but no for source space. According to our results, variance in non-verbal intelligence measure can be mainly explained by the graph metrics built from the networks that include both weak and strong connections between the nodes.
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Affiliation(s)
- Ilya Zakharov
- Developmental Behavioral Genetics Laboratory, Psychological Institute of the Russian Academy of Education, Moscow, Russia
| | - Anna Tabueva
- Developmental Behavioral Genetics Laboratory, Psychological Institute of the Russian Academy of Education, Moscow, Russia
| | - Timofey Adamovich
- Developmental Behavioral Genetics Laboratory, Psychological Institute of the Russian Academy of Education, Moscow, Russia
| | - Yulia Kovas
- Department of Psychology, Goldsmiths University of London, London, United Kingdom
- International Centre for Research in Human Development, Tomsk State University, Tomsk, Russia
| | - Sergey Malykh
- Developmental Behavioral Genetics Laboratory, Psychological Institute of the Russian Academy of Education, Moscow, Russia
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Locating and navigation mechanism based on place-cell and grid-cell models. Cogn Neurodyn 2016; 10:353-60. [PMID: 27468322 DOI: 10.1007/s11571-016-9384-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2015] [Revised: 03/06/2016] [Accepted: 03/21/2016] [Indexed: 10/22/2022] Open
Abstract
Extensive experiments on rats have shown that environmental cues play an important role in goal locating and navigation. Major studies about locating and navigation are carried out based only on place cells. Nevertheless, it is known that navigation may also rely on grid cells. Therefore, we model locating and navigation based on both, thus developing a novel grid-cell model, from which firing fields of grid cells can be obtained. We found a continuous-time dynamic system to describe learning and direction selection. In our simulation experiment, according to the results from physiology experiments, we successfully rebuild place fields of place cells and firing fields of grid cells. We analyzed the factors affecting the locating accuracy. Results show that the learning rate, firing threshold and cell number can influence the outcomes from various tasks. We used our system model to perform a goal navigation task and showed that paths that are changed for every run in one experiment converged to a stable one after several runs.
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Cassel JC, Pereira de Vasconcelos A. Importance of the ventral midline thalamus in driving hippocampal functions. PROGRESS IN BRAIN RESEARCH 2015; 219:145-61. [DOI: 10.1016/bs.pbr.2015.03.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Sasaki T, Leutgeb S, Leutgeb JK. Spatial and memory circuits in the medial entorhinal cortex. Curr Opin Neurobiol 2014; 32:16-23. [PMID: 25463560 DOI: 10.1016/j.conb.2014.10.008] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2014] [Revised: 10/11/2014] [Accepted: 10/15/2014] [Indexed: 10/24/2022]
Abstract
The large capacity of episodic memory is thought to be supported by the emergence of distinct hippocampal cell assemblies for unrelated memories, such that interference is minimized. In large-scale population recordings, the orthogonal nature of hippocampal representations across environments is evident in the complete reorganization of the firing locations of hippocampal place cells. Entorhinal grid cells provide inputs to the hippocampus, and their firing patterns shift relative to each other across different environments. Although this suggests that altered grid cell firing could generate distinct hippocampal population codes, it has recently been shown that new and distinct hippocampal place fields emerge while grid cell firing is compromised. We therefore propose that separate circuits within the medial entorhinal cortex are specialized for performing either spatial or memory-related computations.
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Affiliation(s)
- Takuya Sasaki
- Neurobiology Section and Center for Neural Circuits and Behavior, Division of Biological Sciences, University of California, San Diego, La Jolla, CA, USA
| | - Stefan Leutgeb
- Neurobiology Section and Center for Neural Circuits and Behavior, Division of Biological Sciences, University of California, San Diego, La Jolla, CA, USA; Kavli Institute for Brain and Mind, University of California, San Diego, La Jolla, CA, USA
| | - Jill K Leutgeb
- Neurobiology Section and Center for Neural Circuits and Behavior, Division of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.
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Brandon MP, Koenig J, Leutgeb JK, Leutgeb S. New and distinct hippocampal place codes are generated in a new environment during septal inactivation. Neuron 2014; 82:789-96. [PMID: 24853939 DOI: 10.1016/j.neuron.2014.04.013] [Citation(s) in RCA: 95] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/01/2014] [Indexed: 11/15/2022]
Abstract
The hippocampus generates distinct neural codes to disambiguate similar experiences, a process thought to underlie episodic memory function. Entorhinal grid cells provide a prominent spatial signal to hippocampus, and changes in their firing pattern could thus generate a distinct spatial code in each context. We examined whether we would preclude the emergence of new spatial representations in a novel environment during muscimol inactivation of the medial septal area, a manipulation known to disrupt theta oscillations and grid cell firing. We found that new, highly distinct configurations of place fields emerged immediately and remained stable during the septal inactivation. The new place code persisted when theta oscillations had recovered. Theta rhythmicity and feedforward input from grid cell networks were thus not required to generate new spatial representations in the hippocampus.
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Affiliation(s)
- Mark P Brandon
- Neurobiology Section and Center for Neural Circuits and Behavior, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA
| | - Julie Koenig
- Neurobiology Section and Center for Neural Circuits and Behavior, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA
| | - Jill K Leutgeb
- Neurobiology Section and Center for Neural Circuits and Behavior, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA
| | - Stefan Leutgeb
- Neurobiology Section and Center for Neural Circuits and Behavior, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA; Kavli Institute for Brain and Mind, University of California, San Diego, La Jolla, CA 92093, USA.
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