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Bao C, Li M, Zhao X, Shi J, Liu Y, Zhang N, Zhou Y, Ma J, Chen G, Zhang S, Chen H. Mining of key genes for cold adaptation from Pseudomonas fragi D12 and analysis of its cold-adaptation mechanism. Front Microbiol 2023; 14:1215837. [PMID: 37485517 PMCID: PMC10358777 DOI: 10.3389/fmicb.2023.1215837] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Accepted: 06/21/2023] [Indexed: 07/25/2023] Open
Abstract
The psychrotroph Pseudomonas fragi D12, which grew strongly under low temperatures, was screened from tundra soil collected from the permanent alpine zone on Changbai Mountain. To mine the genes critical for cold tolerance and to investigate the cold-adaptation mechanism, whole-genome sequencing, comparative genomic analysis, and transcriptome analysis were performed with P. fragi. A total of 124 potential cold adaptation genes were identified, including nineteen unique cold-adaptive genes were detected in the genome of P. fragi D12. Three unique genes associated with pili protein were significantly upregulated at different degrees of low temperature, which may be the key to the strong low-temperature adaptability of P. fragi D12. Meanwhile, we were pleasantly surprised to find that Pseudomonas fragi D12 exhibited different cold-adaptation mechanisms under different temperature changes. When the temperature declined from 30°C to 15°C, the response included maintenance of the fluidity of cell membranes, increased production of extracellular polymers, elevation in the content of compatibility solutes, and reduction in the content of reactive oxygen species, thereby providing a stable metabolic environment. When the temperature decreased from 15°C to 4°C, the response mainly included increases in the expression of molecular chaperones and transcription factors, enabling the bacteria to restore normal transcription and translation. The response mechanism of P. fragi D12 to low-temperature exposure is discussed. The results provide new ideas for the cold-adaptation mechanism of cold-tolerant microorganisms.
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Affiliation(s)
- Changjie Bao
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Muzi Li
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Xuhui Zhao
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Jia Shi
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Yehui Liu
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Na Zhang
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Yuqi Zhou
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Jie Ma
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Guang Chen
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
| | - Sitong Zhang
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Huan Chen
- Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Ministry of Education, Changchun, China
- College of Life Science, Jilin Agricultural University, Changchun, China
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Marti-Colombas M, Sánchez-Calabuig M, Castaño C, Toledano-Díaz A, Martínez-Nevado E, López-Goya A, Santiago-Moreno J. Optimization of semen cryopreservation in black-footed (Spheniscus demersus) and gentoo (Pygoscelis papua) penguins using dimethylacetamide and dimethylsulfoxide. Anim Reprod Sci 2022; 237:106933. [DOI: 10.1016/j.anireprosci.2022.106933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Revised: 01/18/2022] [Accepted: 01/20/2022] [Indexed: 11/01/2022]
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Schneider H, Fischer D, Mathews SR, Failing K, Delehanty DJ, Lierz M. Semen collection, semen analysis and artificial insemination in Columbian sharp-tailed grouse (Tympanuchus phasianellus columbianus) as part of a species conservation project. Theriogenology 2019; 132:128-137. [PMID: 31022602 DOI: 10.1016/j.theriogenology.2019.03.037] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2018] [Revised: 02/21/2019] [Accepted: 03/31/2019] [Indexed: 10/27/2022]
Abstract
Columbian sharp-tailed grouse (Tympanuchus phasianellus columbianus; hereafter CSTG) have experienced substantial decreases in population numbers and geographic range during the early 20th century, primarily due to habitat loss. The conservation aim of this project was to re-establish a self-sustaining population of CSTG within an unoccupied portion of their historic range in northeastern Nevada via reintroduction from source populations in Idaho, USA. Female nest initiation rates post-translocation due to low fertilization rates are believed to be one limiting factor in the establishment of some translocated CSTG populations. However, studies on semen collection and artificial insemination in this species are absent. Assisted reproduction was evaluated as an additional tool in this species conservation project in order to gain knowledge on the reproductive status of yearling and adult male CSTG, establish orientation values for semen parameters and evaluate artificial insemination procedures on female CSTG. In two consecutive breeding seasons, semen collection was attempted 51 times in 47 males using the established massage method, and a novel electro-stimulation technique. Semen collection was successful in all attempts, even in yearling grouse, which represents a novel confirmation that yearling male CSTG can produce live spermatozoa in their first breeding season. Volume, color, consistency, contamination, pH of semen, and the motility, concentration, viability and morphology of spermatozoa were analyzed. Extracted semen volume ranged between 6 and 74 μl and the mean pH was 6.9 ± 0.5 (x¯ ± SD). Morphology analysis revealed that on average, 42.8% of sperm was morphologically normal, but 34.8% had malformed tails. Additionally, artificial insemination was practiced in 17 females (sham-insemination group; insemination lacking spermatozoa) and performed in 17 females. Intravenous catheters G20 1.0 mm × 32 mm enabled safe intravaginal insemination under visual control. Significant (p ≤ 0.05) differences in semen parameters between adult and yearling birds were detected. It is well established that adult males receive a majority of copulations during lekking, but our novel findings also indicate that they produce significantly more spermatozoa which is of higher quality than yearling males. This finding offers insights into male reproductive biology in a lekking grouse species.
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Affiliation(s)
- H Schneider
- Clinic for Birds, Reptiles, Amphibians and Fish, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 91, 35392 Giessen, Germany.
| | - D Fischer
- Clinic for Birds, Reptiles, Amphibians and Fish, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 91, 35392 Giessen, Germany
| | - S R Mathews
- Department of Biological Sciences, Idaho State University, 921 S. 8th. Ave, Pocatello, ID 83209-8007, USA
| | - K Failing
- Unit for Biomathematics and Data Processing, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 95, 35392 Giessen, Germany
| | - D J Delehanty
- Department of Biological Sciences, Idaho State University, 921 S. 8th. Ave, Pocatello, ID 83209-8007, USA
| | - M Lierz
- Clinic for Birds, Reptiles, Amphibians and Fish, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 91, 35392 Giessen, Germany
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Semen cryopreservation in black-footed (Spheniscus demersus) and gentoo (Pygoscelis papua) penguins: Effects of thawing temperature on semen characteristics. Anim Reprod Sci 2018; 200:60-66. [PMID: 30503661 DOI: 10.1016/j.anireprosci.2018.11.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Revised: 11/14/2018] [Accepted: 11/24/2018] [Indexed: 11/24/2022]
Abstract
In this study, there was an examination of the effect on the characteristics of cryopreserved black-footed (Spheniscus demersus) and gentoo (Pygoscelis papua) penguin semen, of thawing at 37 and 5 °C. For two consecutive years, semen was collected and frozen during the April-June period from six gentoo penguins, and during the October-November period from 13 black-footed penguins. After thawing, sperm motility variables were examined by computer-assisted sperm analysis. Propidium iodide and SYBR-14 were used as fluorochromes for the examination of membrane integrity. For the gentoo penguins, no differences were detected in the values of frozen-thawed semen characteristics after thawing at 37 or 5 °C. For the black-footed penguins, however, thawing at 5 °C resulted in greater values (P < 0.05) for straight-line velocity (VSL), average path velocity (VAP), linearity (LIN), straightness (STR), and wobble (WOB) as compared with thawing at 37 °C. After thawing at 37 ºC, there were greater values with gentoo penguin sperm for percentage motile sperm, progressive motility, curvilinear velocity (VCL), VSL VAP, LIN, STR, WOB and beat-cross frequency (BCF; P < 0.05) than that for black-footed penguin sperm. After thawing at 5 ºC, there were no differences in values for any variables between the two species. In conclusion, thawing temperature affects semen characteristics in a species-specific manner. The present data strongly suggest that cryopreservation procedures should be adapted for use with each penguin species. Cryopreserved black-footed penguin semen should be thawed after cryopreservation at 5 ºC, while that of gentoo penguins can be thawed at either 5 or 37 ºC.
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Bublat A, Fischer D, Bruslund S, Schneider H, Meinecke-Tillmann S, Wehrend A, Lierz M. Seasonal and genera-specific variations in semen availability and semen characteristics in large parrots. Theriogenology 2016; 91:82-89. [PMID: 28215690 DOI: 10.1016/j.theriogenology.2016.11.029] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2016] [Revised: 11/26/2016] [Accepted: 11/26/2016] [Indexed: 10/20/2022]
Abstract
In large parrots electro-stimulation is suitable for collecting semen, and therefore, to facilitate semen examination and artificial insemination. Previous studies have detected differences in the semen collection success rate and semen parameters between psittacine genera. It remained unclear whether these differences were genera-related, seasonal variations or depend on the males' relationship status. To answer these questions, semen collection and spermatological analysis were performed for four psittacine groups (macaws, amazons, eclectus parrots and cockatoos) over 13 months. In one breeding facility, semen collection was attempted in 82 males using electro-stimulation twice monthly. A complete spermatological evaluation was performed on 435 semen samples. Volume, color, consistency, contamination and pH of semen, as well as motility, progressive motility, sperm concentration, total sperm count, viability, and morphology of spermatozoa were evaluated. Seasonality affected the collection success rate in macaws and amazons. Thereby, in amazons a distinct peak was observed several days before and around oviposition, whereas eclectus parrots and cockatoos produced semen all year round. The average sperm concentration was highest in eclectus parrots (2.7 × 106 sperm/μl) and lowest in macaws (35.6 × 103 sperm/μl). The differences in the semen collection success rate and semen parameters seem to coincide with the bird's breeding biology. The collected data allows a prognostic estimation when semen collection seems favorable, and may be taken as orientation values for semen analysis in these species.
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Affiliation(s)
- A Bublat
- Clinic for Birds, Reptiles, Amphibians and Fish, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 91, D-35392 Giessen, Germany.
| | - D Fischer
- Clinic for Birds, Reptiles, Amphibians and Fish, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 91, D-35392 Giessen, Germany
| | - S Bruslund
- Loro Parque Fundación, Avenida Loro Parque s/n, 38400 Puerto de la Cruz, Tenerife, Spain.
| | - H Schneider
- Clinic for Birds, Reptiles, Amphibians and Fish, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 91, D-35392 Giessen, Germany
| | - S Meinecke-Tillmann
- Department of Reproductive Biology, University of Veterinary Medicine Hannover, Bünteweg 2, 30559 Hanover, Germany.
| | - A Wehrend
- Clinic for Obstetrics, Gynecology and Andrology of Large and Small Animals, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 106, 35392 Giessen, Germany.
| | - M Lierz
- Clinic for Birds, Reptiles, Amphibians and Fish, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Frankfurter Str. 91, D-35392 Giessen, Germany
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MALE REPRODUCTIVE PHYSIOLOGY AND THE DEVELOPMENT OF ARTIFICIAL INSEMINATION IN THE MAGELLANIC PENGUIN (SPHENISCUS MAGELLANICUS) USING CHILLED-STORED SEMEN. J Zoo Wildl Med 2016; 47:206-22. [PMID: 27010281 DOI: 10.1638/2015-0209.1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Research was performed to increase our understanding of male Magellanic penguin (Spheniscus magellanicus) reproductive biology and to develop artificial insemination (AI) technology to assist with maintaining the species' genetic diversity. Seminal traits were characterized from seven males with noncontaminated ejaculates (n = 123) displaying high in vitro motion parameters, membrane integrity, and morphology. Seven females were maintained in nest sites that permitted visual, auditory, and tactile contact with their paired male but not copulation for 18.3 ± 2.4 days before egg lay. After cloacal AI (2.6 ± 0.4 inseminations/female) with semen chilled for up to 20.5 hr at 5°C, all females produced one to two fertile eggs, with the first oviposition occurring within 7 days of plasma progesterone concentrations exceeding 0.8 ng/ml. Overall fertility was 91.7%, hatchability was 63.6%, and genetic analyses confirmed that all embryos and hatchlings were sired by AI males. The heterospermic AI design demonstrated that eggs were fertilized by spermatozoa chilled for 1.5-19.8 hr before AI and were laid 4.5-11.5 days post AI. These results contribute new data on Magellanic penguin sperm biology and demonstrate that high fertility rates after AI of chilled semen can be achieved with females remaining in proximity to their paired mate.
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Fischer D, Neumann D, Purchase C, Bouts T, Meinecke-Tillmann S, Wehrend A, Lierz M. The use of semen evaluation and assisted reproduction in Spix's macaws in terms of species conservation. Zoo Biol 2014; 33:234-44. [DOI: 10.1002/zoo.21129] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2013] [Revised: 03/21/2014] [Accepted: 03/26/2014] [Indexed: 11/05/2022]
Affiliation(s)
- Dominik Fischer
- Clinic for Birds, Reptiles, Amphibians and Fish; Faculty of Veterinary Medicine; Justus Liebig University Giessen; Giessen Germany
| | | | | | - Tim Bouts
- Al Wabra Wildlife Preservation; Al Shahaniya Qatar
| | | | - Axel Wehrend
- Clinic for Obstetrics, Gynecology and Andrology of Large and Small Animals, Faculty of Veterinary Medicine; Justus Liebig University Giessen; Giessen Germany
| | - Michael Lierz
- Clinic for Birds, Reptiles, Amphibians and Fish; Faculty of Veterinary Medicine; Justus Liebig University Giessen; Giessen Germany
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O'Brien JK, Robeck TR. Semen characterization, seasonality of production, and in vitro sperm quality after chilled storage and cryopreservation in the king penguin (Aptenodytes patagonicus). Zoo Biol 2014; 33:99-109. [DOI: 10.1002/zoo.21111] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2013] [Revised: 11/04/2013] [Accepted: 12/06/2013] [Indexed: 10/25/2022]
Affiliation(s)
- Justine K. O'Brien
- SeaWorld and Busch Gardens Reproductive Research Center; SeaWorld Parks and Entertainment; San Diego California
| | - Todd R. Robeck
- SeaWorld and Busch Gardens Reproductive Research Center; SeaWorld Parks and Entertainment; San Diego California
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