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Miller K, Joldes GR, Bourantas G, Warfield S, Hyde DE, Kikinis R, Wittek A. Biomechanical modeling and computer simulation of the brain during neurosurgery. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2019; 35:e3250. [PMID: 31400252 PMCID: PMC6785376 DOI: 10.1002/cnm.3250] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Revised: 06/28/2019] [Accepted: 08/08/2019] [Indexed: 06/10/2023]
Abstract
Computational biomechanics of the brain for neurosurgery is an emerging area of research recently gaining in importance and practical applications. This review paper presents the contributions of the Intelligent Systems for Medicine Laboratory and its collaborators to this field, discussing the modeling approaches adopted and the methods developed for obtaining the numerical solutions. We adopt a physics-based modeling approach and describe the brain deformation in mechanical terms (such as displacements, strains, and stresses), which can be computed using a biomechanical model, by solving a continuum mechanics problem. We present our modeling approaches related to geometry creation, boundary conditions, loading, and material properties. From the point of view of solution methods, we advocate the use of fully nonlinear modeling approaches, capable of capturing very large deformations and nonlinear material behavior. We discuss finite element and meshless domain discretization, the use of the total Lagrangian formulation of continuum mechanics, and explicit time integration for solving both time-accurate and steady-state problems. We present the methods developed for handling contacts and for warping 3D medical images using the results of our simulations. We present two examples to showcase these methods: brain shift estimation for image registration and brain deformation computation for neuronavigation in epilepsy treatment.
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Affiliation(s)
- K. Miller
- Intelligent Systems for Medicine Laboratory, Department of Mechanical Engineering, The University of Western Australia, 35 Stirling Highway, Perth, WA 6009, Australia
| | - G. R. Joldes
- Intelligent Systems for Medicine Laboratory, Department of Mechanical Engineering, The University of Western Australia, 35 Stirling Highway, Perth, WA 6009, Australia
| | - G. Bourantas
- Intelligent Systems for Medicine Laboratory, Department of Mechanical Engineering, The University of Western Australia, 35 Stirling Highway, Perth, WA 6009, Australia
| | - S.K. Warfield
- Computational Radiology Laboratory, Department of Radiology, Boston Children’s Hospital and Harvard Medical School, 300 Longwood Avenue, Boston MA 02115
| | - D. E. Hyde
- Computational Radiology Laboratory, Department of Radiology, Boston Children’s Hospital and Harvard Medical School, 300 Longwood Avenue, Boston MA 02115
| | - R. Kikinis
- Surgical Planning Laboratory, Brigham and Women’s Hospital and Harvard Medical School, 45 Francis St, Boston, MA 02115
- Medical Image Computing, University of Bremen, Germany
- Fraunhofer MEVIS, Bremen, Germany
| | - A. Wittek
- Intelligent Systems for Medicine Laboratory, Department of Mechanical Engineering, The University of Western Australia, 35 Stirling Highway, Perth, WA 6009, Australia
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Zhang JY, Joldes GR, Wittek A, Miller K. Patient-specific computational biomechanics of the brain without segmentation and meshing. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2013; 29:293-308. [PMID: 23345159 DOI: 10.1002/cnm.2507] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2012] [Revised: 06/24/2012] [Accepted: 07/20/2012] [Indexed: 06/01/2023]
Abstract
Motivated by patient-specific computational modelling in the context of image-guided brain surgery, we propose a new fuzzy mesh-free modelling framework. The method works directly on an unstructured cloud of points that do not form elements so that mesh generation is not required. Mechanical properties are assigned directly to each integration point based on fuzzy tissue classification membership functions without the need for image segmentation. Geometric integration is performed over an underlying uniform background grid. The verification example shows that, while requiring no hard segmentation and meshing, the proposed model gives, for all practical purposes, equivalent results to a finite element model.
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Affiliation(s)
- Johnny Y Zhang
- Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
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