1
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Khera HK, Mishra R. Nucleic Acid Based Testing (NABing): A Game Changer Technology for Public Health. Mol Biotechnol 2024; 66:2168-2200. [PMID: 37695473 DOI: 10.1007/s12033-023-00870-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 08/21/2023] [Indexed: 09/12/2023]
Abstract
Timely and accurate detection of the causal agent of a disease is crucial to restrict suffering and save lives. Mere symptoms are often not enough to detect the root cause of the disease. Better diagnostics applied for screening at a population level and sensitive detection assays remain the crucial component of disease surveillance which may include clinical, plant, and environmental samples, including wastewater. The recent advances in genome sequencing, nucleic acid amplification, and detection methods have revolutionized nucleic acid-based testing (NABing) and screening assays. A typical NABing assay consists of three modules: isolation of the nucleic acid from the collected sample, identification of the target sequence, and final reading the target with the help of a signal, which may be in the form of color, fluorescence, etc. Here, we review current NABing assays covering the different aspects of all three modules. We also describe the frequently used target amplification or signal amplification procedures along with the variety of applications of this fast-evolving technology and challenges in implementation of NABing in the context of disease management especially in low-resource settings.
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Affiliation(s)
- Harvinder Kour Khera
- Tata Institute for Genetics and Society, New inStem Building NCBS Campus, GKVK Post, Bellary Road, Bengaluru, 560065, India.
| | - Rakesh Mishra
- Tata Institute for Genetics and Society, New inStem Building NCBS Campus, GKVK Post, Bellary Road, Bengaluru, 560065, India.
- CSIR-Centre for Cellular and Molecular Biology, Uppal Rd, IICT Colony, Habsiguda, Hyderabad, Telangana, 500007, India.
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2
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Allen MC, Lookmire S, Avci E. An Alternative Micro-Milling Fabrication Process for Rapid and Low-Cost Microfluidics. MICROMACHINES 2024; 15:905. [PMID: 39064416 PMCID: PMC11279306 DOI: 10.3390/mi15070905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2024] [Revised: 07/08/2024] [Accepted: 07/10/2024] [Indexed: 07/28/2024]
Abstract
Microfluidics is an important technology for the biomedical industry and is often utilised in our daily lives. Recent advances in micro-milling technology have allowed for rapid fabrication of smaller and more complex structures, at lower costs, making it a viable alternative to other fabrication methods. The microfluidic chip fabrication developed in this research is a step-by-step process with a self-contained wet milling chamber. Additionally, ethanol solvent bonding is used to allow microfluidic chips to be fully fabricated within approximately an hour. The effect of using this process is tested with quantitative contact profileometery data to determine the expected surface roughness in the microchannels. The effect of surface roughness on the controllability of microparticles is tested in functional microfluidic chips using image processing to calculate particle velocity. This process can produce high-quality channels when compared with similar studies in the literature and surface roughness affects the control of microparticles. Lastly, we discuss how the outcomes of this research can produce rapid and higher-quality microfluidic devices, leading to improvement in the research and development process within the fields of science that utilise microfluidic technology. Such as medicine, biology, chemistry, ecology, and aerospace.
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Affiliation(s)
- Martin Christopher Allen
- College of Sciences, School of Food and Advanced Technology, Massey University, Palmerston North 4410, New Zealand;
| | - Simon Lookmire
- College of Sciences, School of Food and Advanced Technology, Massey University, Palmerston North 4410, New Zealand;
| | - Ebubekir Avci
- The MacDiarmid Institute, Victoria University of Wellington, P.O. Box 600, Wellington 6140, New Zealand;
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3
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Argueta-Diaz V, Owens M, Al Ramadan A. Increasing Optical Path Lengths in Micro-Fluidic Devices Using a Multi-Pass Cell. MICROMACHINES 2024; 15:820. [PMID: 39064331 PMCID: PMC11278631 DOI: 10.3390/mi15070820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Revised: 06/09/2024] [Accepted: 06/21/2024] [Indexed: 07/28/2024]
Abstract
This study presents a novel absorption cell with a circular geometry that can be integrated into microfluidic devices for optical spectroscopy applications. The absorption cell is made of PDMS/SU8 and offers an optical path length that is 8.5 times its diameter, resulting in a significant increase in the sensitivity of the measurements. Overall, this design provides a reliable and efficient solution for optical spectroscopy in microfluidic systems, enabling the precise detection and analysis of small quantities of analytes.
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Affiliation(s)
| | - McKenna Owens
- College of Engineering, University of Michigan, Ann Arbor, MI 48109, USA;
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4
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Bahavarnia F, Bahari H, Hasanzadeh M, Shadjou N. Identification of taurine biomarker in human biofluids using plasmonic patterns of silver nanostructure. RSC Adv 2024; 14:20410-20419. [PMID: 38932979 PMCID: PMC11200211 DOI: 10.1039/d4ra03575e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2024] [Accepted: 06/01/2024] [Indexed: 06/28/2024] Open
Abstract
Taurine is now widely used as a new biomarker for cardiovascular and neurodegenerative diseases. This study discusses the importance of accurately determining taurine biomarker levels in various tissues and fluids for the early diagnosis of important pathologies and diseases. Current methods for taurine analysis face challenges such as low sensitivity, lack of selectivity, and complex procedures. Therefore, an efficient analytical method/technique is urgently needed by clinicians. A new paper-based photochemical method using triangular silver nanoparticles (TA-AgNPs) as optical nanoprobes was developed to detect taurine in human blood plasma and urine samples. This method involves a chemical reaction between taurine and TA-AgNPs, leading to a color change at pH 4.8, which is detected using a paper-based colorimetry (PCD) assay. The reaction is further confirmed by UV-visible spectrophotometry as the interaction between taurine and TA-AgNPs causes a significant change in the absorption spectrum, enabling the rapid and reliable measurement of this important biomarker with a detection limit of less than 0.2 μM to 20 mM. The method has been successfully applied to bioanalyzing taurine in human body fluids. Additionally, it requires optimized single-drop paper/parafilm-based colorimetric devices (OD-PCDs) for in situ and on-demand taurine analysis. This study represents the first use of TA-AgNPs for the specific and sensitive detection of taurine in real samples. The sensor design allows for the direct quantification of biomarkers in biological samples without the need for derivatization procedures or sample preparation. The simplicity and portability of OD-PCDs make them promising for tracking and monitoring. This method is expected to contribute to improving environmental health and occupational safety and represents a significant advancement in colorimetric analysis for the sensitive and selective detection of taurine, potentially providing a platform for the identification of taurine and other biomarkers.
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Affiliation(s)
- Farnaz Bahavarnia
- Nutrition Research Center, Tabriz University of Medical Sciences Tabriz Iran
| | - Hamed Bahari
- Food and Drug Safety Research Center, Tabriz University of Medical Sciences Tabriz Iran
| | - Mohammad Hasanzadeh
- Pharmaceutical Analysis Research Center, Tabriz University of Medical Sciences Tabriz Iran
| | - Nasrin Shadjou
- Department of Nanotechnology, Faculty of Chemistry, Urmia University Urmia Iran
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5
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Aubrecht P, Smejkal J, Panuška P, Španbauerová K, Neubertová V, Kaule P, Matoušek J, Vinopal S, Liegertová M, Štofik M, Malý J. Performance and biocompatibility of OSTEMER 322 in cell-based microfluidic applications. RSC Adv 2024; 14:3617-3635. [PMID: 38268545 PMCID: PMC10804231 DOI: 10.1039/d3ra05789e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 01/14/2024] [Indexed: 01/26/2024] Open
Abstract
The Off-Stoichiometry Thiol-ene and Epoxy (OSTE+) polymer technology has been increasingly utilised in the field of microfluidics and lab-on-a-chip applications. However, the impact of OSTEMER polymers, specifically the OSTEMER 322 formulation, on cell viability has remained limited. In this work, we thoroughly explored the biocompatibility of this commercial OSTEMER formulation, along with various surface modifications, through a broad range of cell types, from fibroblasts to epithelial cells. We employed cell viability and confluence assays to evaluate the performance of the material and its modified variants in cell culturing. The properties of the pristine and modified OSTEMER were also investigated using surface characterization methods including contact angle, zeta potential, and X-ray photoelectron spectroscopy. Mass spectrometry analysis confirmed the absence of leaching constituents from OSTEMER, indicating its safety for cell-based applications. Our findings demonstrated that cell viability on OSTEMER surfaces is sufficient for typical cell culture experiments, suggesting OSTEMER 322 is a suitable material for a variety of cell-based assays in microfluidic devices.
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Affiliation(s)
- Petr Aubrecht
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Jiří Smejkal
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Petr Panuška
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Klára Španbauerová
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Viktorie Neubertová
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Pavel Kaule
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
- Department of Chemistry, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Jindřich Matoušek
- Department of Physics, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Stanislav Vinopal
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Michaela Liegertová
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Marcel Štofik
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
| | - Jan Malý
- Centre for Nanomaterials and Biotechnology, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem Pasteurova 3632/15 400 96 Ústí nad Labem Czech Republic
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6
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Chang JL, Huang CJ, Tsai YC, Chiang NJ, Huang YS, Hung SC, Shan YS, Lee GB. An integrated microfluidic system for automatic detection of cholangiocarcinoma cells from bile. LAB ON A CHIP 2024; 24:375-382. [PMID: 38126571 DOI: 10.1039/d3lc00862b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2023]
Abstract
Cholangiocarcinoma (CCA) is an aggressive cancer that originates from the epithelial cells lining the bile ducts. Due to its location deep within the body and nonspecific symptoms in the early stages, it is often diagnosed at the advanced stage, thus leading to worse prognosis. Circulating tumor cells within liquid biopsies (i.e. blood) have been considered as promising biomarkers for CCA diagnosis, though current methods for profiling them are not satisfactory in terms of sensitivity and specificity. Herein we developed a new cancer cell probing and immuno-tracking assay known as "CAPTURE", which was performed on an integrated microfluidic system (IMS) to automate CCA diagnosis from bile with a sample amount of only 1 mL. The assay utilized magnetic beads surface-coated with two affinity reagents, a nucleic acid aptamer (HN16) and a glycosaminoglycan (SCH 45-mix), for capturing cancer cells in bile; the "gold standard" anti-epithelial cell adhesion molecule was used as a comparison. In a single-blind test of 54 CCA-positive (+) and 102 CCA-negative (-) clinical samples, sensitivities and specificities of 96 and 80%, respectively, were documented with the CAPTURE assay on-bench. An IMS composed of a centrifugal module for sample pretreatment and a CAPTURE module for cell capture and staining was integrated with a new "vertical integration module" for detecting cancer cells from bile without human intervention. Furthermore, a novel micro-tier structure within the centrifugal module was designed to block passage of gallbladder stones with diameters >1 mm, thereby preventing their interference during the subsequent CAPTURE assay. Improved sensitivity and specificity (100 & 83%, respectively) by using three affinity reagents were achieved on the IMS when using 26 clinical bile samples, confirming its clinical bio-applicability for CCA diagnosis. This approach could be therefore used for early-stage CCA diagnostics, ideally enabling effective treatment, as well as reducing potential for relapse.
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Affiliation(s)
- Jui-Lin Chang
- Institute of Biomedical Engineering, National Tsing Hua University, Hsinchu, Taiwan.
| | - Chien-Jui Huang
- Institute of Clinical Medicine, College of Medicine, National Cheng Kung University, Tainan, Taiwan
| | - Yi-Cheng Tsai
- Department of Power Mechanical Engineering, National Tsing Hua University, Hsinchu, Taiwan
| | - Nai-Jung Chiang
- Department of Oncology, Taipei Veterans General Hospital, Taipei, Taiwan.
| | - Yu-Shan Huang
- Institute of Clinical Medicine, College of Medicine, National Cheng Kung University, Tainan, Taiwan
| | | | - Yan-Shen Shan
- Institute of Clinical Medicine, College of Medicine, National Cheng Kung University, Tainan, Taiwan
| | - Gwo-Bin Lee
- Institute of Biomedical Engineering, National Tsing Hua University, Hsinchu, Taiwan.
- Department of Power Mechanical Engineering, National Tsing Hua University, Hsinchu, Taiwan
- Institute of NanoEngineering and MicroSystems, National Tsing Hua University, Hsinchu, Taiwan
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7
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Biosensor integrated brain-on-a-chip platforms: Progress and prospects in clinical translation. Biosens Bioelectron 2023; 225:115100. [PMID: 36709589 DOI: 10.1016/j.bios.2023.115100] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Revised: 01/07/2023] [Accepted: 01/22/2023] [Indexed: 01/26/2023]
Abstract
Because of the brain's complexity, developing effective treatments for neurological disorders is a formidable challenge. Research efforts to this end are advancing as in vitro systems have reached the point that they can imitate critical components of the brain's structure and function. Brain-on-a-chip (BoC) was first used for microfluidics-based systems with small synthetic tissues but has expanded recently to include in vitro simulation of the central nervous system (CNS). Defining the system's qualifying parameters may improve the BoC for the next generation of in vitro platforms. These parameters show how well a given platform solves the problems unique to in vitro CNS modeling (like recreating the brain's microenvironment and including essential parts like the blood-brain barrier (BBB)) and how much more value it offers than traditional cell culture systems. This review provides an overview of the practical concerns of creating and deploying BoC systems and elaborates on how these technologies might be used. Not only how advanced biosensing technologies could be integrated with BoC system but also how novel approaches will automate assays and improve point-of-care (PoC) diagnostics and accurate quantitative analyses are discussed. Key challenges providing opportunities for clinical translation of BoC in neurodegenerative disorders are also addressed.
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8
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Anushka, Bandopadhyay A, Das PK. Paper based microfluidic devices: a review of fabrication techniques and applications. THE EUROPEAN PHYSICAL JOURNAL. SPECIAL TOPICS 2022; 232:781-815. [PMID: 36532608 PMCID: PMC9743133 DOI: 10.1140/epjs/s11734-022-00727-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 11/09/2022] [Indexed: 06/14/2023]
Abstract
A wide range of applications are possible with paper-based analytical devices, which are low priced, easy to fabricate and operate, and require no specialized equipment. Paper-based microfluidics offers the design of miniaturized POC devices to be applied in the health, environment, food, and energy sector employing the ASSURED (Affordable, Sensitive, Specific, User-friendly, Rapid and Robust, Equipment free and Deliverable to end users) principle of WHO. Therefore, this field is growing very rapidly and ample research is being done. This review focuses on fabrication and detection techniques reported to date. Additionally, this review emphasises on the application of this technology in the area of medical diagnosis, energy generation, environmental monitoring, and food quality control. This review also presents the theoretical analysis of fluid flow in porous media for the efficient handling and control of fluids. The limitations of PAD have also been discussed with an emphasis to concern on the transformation of such devices from laboratory to the consumer.
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Affiliation(s)
- Anushka
- Department of Mechanical Engineering, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302 India
| | - Aditya Bandopadhyay
- Department of Mechanical Engineering, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302 India
| | - Prasanta Kumar Das
- Department of Mechanical Engineering, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302 India
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9
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Kanjwal MA, Ghaferi AA. Advanced Waveguide Based LOC Biosensors: A Minireview. SENSORS (BASEL, SWITZERLAND) 2022; 22:5443. [PMID: 35891123 PMCID: PMC9323137 DOI: 10.3390/s22145443] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 06/28/2022] [Accepted: 07/13/2022] [Indexed: 06/15/2023]
Abstract
This mini review features contemporary advances in mid-infrared (MIR) thin-film waveguide technology and on-chip photonics, promoting high-performance biosensing platforms. Supported by recent developments in MIR thin-film waveguides, it is expected that label-free assimilated MIR sensing platforms will soon supplement the current sensing technologies for biomedical diagnostics. The state-of-the-art shows that various types of waveguide material can be utilized for waveguide spectroscopic measurements in MIR. However, there are challenges to integrating these waveguide platforms with microfluidic/Lab-on-a-Chip (LOC) devices, due to poor light-material interactions. Graphene and its analogs have found many applications in microfluidic-based LOC devices, to address to this issue. Graphene-based materials possess a high conductivity, a large surface-to-volume ratio, a smaller and tunable bandgap, and allow easier sample loading; which is essential for acquiring precise electrochemical information. This work discusses advanced waveguide materials, their advantages, and disease diagnostics with MIR thin-film based waveguides. The incorporation of graphene into waveguides improves the light-graphene interaction, and photonic devices greatly benefit from graphene's strong field-controlled optical response.
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Affiliation(s)
| | - Amal Al Ghaferi
- Mechanical Engineering Department, Khalifa University, Abu Dhabi 127788, United Arab Emirates;
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10
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A Novel Fluidic Platform for Semi-Automated Cell Culture into Multiwell-like Bioreactors. MICROMACHINES 2022; 13:mi13070994. [PMID: 35888811 PMCID: PMC9316907 DOI: 10.3390/mi13070994] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Revised: 06/21/2022] [Accepted: 06/22/2022] [Indexed: 12/07/2022]
Abstract
In this work, we developed and characterized a novel fluidic platform that enables long-term in vitro cell culture in a semi-automated fashion. The system is constituted by a control unit provided with a piezoelectric pump, miniaturized valves, and a microfluidic network for management and fine control of reagents’ flow, connected to a disposable polymeric culture unit resembling the traditional multiwell-like design. As a proof of principle, Human Umbilical Vein Endothelial Cells (HUVEC) and Human Mesenchymal Stem Cells (hMSC) were seeded and cultured into the cell culture unit. The proliferation rate of HUVEC and the osteogenic differentiation of hMSC were assessed and compared to standard culture in Petri dishes. The results obtained demonstrated that our approach is suitable to perform semi-automated cell culture protocols, minimizing the contribution of human operators and allowing the standardization and reproducibility of the procedures. We believe that the proposed system constitutes a promising solution for the realization of user-friendly automated control systems that will favor the standardization of cell culture processes for cell factories, drug testing, and biomedical research.
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11
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Overcoming Multidrug Resistance of Antibiotics via Nanodelivery Systems. Pharmaceutics 2022; 14:pharmaceutics14030586. [PMID: 35335962 PMCID: PMC8950514 DOI: 10.3390/pharmaceutics14030586] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Revised: 02/27/2022] [Accepted: 03/04/2022] [Indexed: 01/04/2023] Open
Abstract
Antibiotic resistance has become a threat to microbial therapies nowadays. The conventional approaches possess several limitations to combat microbial infections. Therefore, to overcome such complications, novel drug delivery systems have gained pharmaceutical scientists’ interest. Significant findings have validated the effectiveness of novel drug delivery systems such as polymeric nanoparticles, liposomes, metallic nanoparticles, dendrimers, and lipid-based nanoparticles against severe microbial infections and combating antimicrobial resistance. This review article comprises the specific mechanism of antibiotic resistance development in bacteria. In addition, the manuscript incorporated the advanced nanotechnological approaches with their mechanisms, including interaction with the bacterial cell wall, inhibition of biofilm formations, activation of innate and adaptive host immune response, generation of reactive oxygen species, and induction of intracellular effect to fight against antibiotic resistance. A section of this article demonstrated the findings related to the development of delivery systems. Lastly, the role of microfluidics in fighting antimicrobial resistance has been discussed. Overall, this review article is an amalgamation of various strategies to study the role of novel approaches and their mechanism to fight against the resistance developed to the antimicrobial therapies.
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12
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Le TNQ, Tran NN, Escribà-Gelonch M, Serra CA, Fisk I, McClements DJ, Hessel V. Microfluidic encapsulation for controlled release and its potential for nanofertilisers. Chem Soc Rev 2021; 50:11979-12012. [PMID: 34515721 DOI: 10.1039/d1cs00465d] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Nanotechnology is increasingly being utilized to create advanced materials with improved or new functional attributes. Converting fertilizers into a nanoparticle-form has been shown to improve their efficacy but the current procedures used to fabricate nanofertilisers often have poor reproducibility and flexibility. Microfluidic systems, on the other hand, have advantages over traditional nanoparticle fabrication methods in terms of energy and materials consumption, versatility, and controllability. The increased controllability can result in the formation of nanoparticles with precise and complex morphologies (e.g., tuneable sizes, low polydispersity, and multi-core structures). As a result, their functional performance can be tailored to specific applications. This paper reviews the principles, formation, and applications of nano-enabled delivery systems fabricated using microfluidic approaches for the encapsulation, protection, and release of fertilizers. Controlled release can be achieved using two main routes: (i) nutrients adsorbed on nanosupports and (ii) nutrients encapsulated inside nanostructures. We aim to highlight the opportunities for preparing a new generation of highly versatile nanofertilisers using microfluidic systems. We will explore several main characteristics of microfluidically prepared nanofertilisers, including droplet formation, shell fine-tuning, adsorbate fine-tuning, and sustained/triggered release behavior.
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Affiliation(s)
- Tu Nguyen Quang Le
- School of Chemical Engineering and Advanced Materials, The University of Adelaide, Adelaide, SA 5005, Australia. .,Faculty of Chemical Engineering, Ho Chi Minh City University of Technology, Ho Chi Minh City, Vietnam
| | - Nam Nghiep Tran
- School of Chemical Engineering and Advanced Materials, The University of Adelaide, Adelaide, SA 5005, Australia. .,School of Chemical Engineering, Can Tho University, Can Tho City, Vietnam
| | - Marc Escribà-Gelonch
- Higher Polytechnic Engineering School, University of Lleida, Igualada (Barcelona), 08700, Spain
| | - Christophe A Serra
- Université de Strasbourg, CNRS, Institut Charles Sadron UPR 22, F-67000 Strasbourg, France
| | - Ian Fisk
- Division of Food, Nutrition and Dietetics, School of Biosciences, University of Nottingham, Loughborough, LE12 5RD, UK.,The University of Adelaide, North Terrace, Adelaide, South Australia, Australia
| | | | - Volker Hessel
- School of Chemical Engineering and Advanced Materials, The University of Adelaide, Adelaide, SA 5005, Australia. .,School of Engineering, University of Warwick, Library Rd, Coventry, UK
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13
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Di Natale C, Battista E, Lettera V, Reddy N, Pitingolo G, Vecchione R, Causa F, Netti PA. Easy Surface Functionalization and Bioconjugation of Peptides as Capture Agents of a Microfluidic Biosensing Platform for Multiplex Assay in Serum. Bioconjug Chem 2021; 32:1593-1601. [PMID: 34114801 PMCID: PMC8382222 DOI: 10.1021/acs.bioconjchem.1c00146] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Revised: 05/28/2021] [Indexed: 12/11/2022]
Abstract
The development of assays for protein biomarkers in complex matrices is a demanding task that still needs implementation of new approaches. Antibodies as capture agents have been largely used in bioassays but their low stability, low-efficiency production, and cross-reactivity in multiplex approaches impairs their larger applications. Instead, synthetic peptides, even with higher stability and easily adapted amino acid sequences, still remain largely unexplored in this field. Here, we provide a proof-of-concept of a microfluidic device for direct detection of biomarker overexpression. The multichannel microfluidic polydimethylsiloxane (PDMS) device was first derivatized with PAA (poly(acrylic acid)) solution. CRP-1, VEGF-114, and ΦG6 peptides were preliminarily tested to respectively bind the biomarkers, C-reactive protein (CRP), vascular endothelial growth factor (VEGF), and tumor necrosis factor-alpha (TNF-α). Each PDMS microchannel was then respectively bioconjugated with a specific peptide (CRP-1, VEGF-114, or ΦG6) to specifically capture CRP, VEGF, and TNF-α. With such microdevices, a fluorescence bioassay has been set up with sensitivity in the nanomolar range, both in buffered solution and in human serum. The proposed multiplex assay worked with a low amount of sample (25 μL) and detected biomarker overexpression (above nM concentration), representing a noninvasive and inexpensive screening platform.
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Affiliation(s)
- Concetta Di Natale
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
- InterdisciplinaryResearch
Centre on Biomaterials (CRIB), Università
degli Studi di Napoli “Federico II”, Piazzale Tecchio 80, 80125 Naples, Italy
| | - Edmondo Battista
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
- InterdisciplinaryResearch
Centre on Biomaterials (CRIB), Università
degli Studi di Napoli “Federico II”, Piazzale Tecchio 80, 80125 Naples, Italy
| | - Vincenzo Lettera
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
- Biopox
srl, Viale Maria Bakunin
12, 80125 Naples, Italy
| | - Narayana Reddy
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
| | - Gabriele Pitingolo
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
| | - Raffaele Vecchione
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
| | - Filippo Causa
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
- InterdisciplinaryResearch
Centre on Biomaterials (CRIB), Università
degli Studi di Napoli “Federico II”, Piazzale Tecchio 80, 80125 Naples, Italy
- Dipartimento
di Ingegneria Chimica del Materiali e della Produzione Industriale
(DICMAPI), University “Federico II”, Piazzale Tecchio 80, 80125 Naples, Italy
| | - Paolo Antonio Netti
- Center
for Advanced Biomaterials for Healthcare@CRIB, Istituto Italiano di Tecnologia (IIT), Largo Barsanti e Matteucci 53, 80125 Naples, Italy
- InterdisciplinaryResearch
Centre on Biomaterials (CRIB), Università
degli Studi di Napoli “Federico II”, Piazzale Tecchio 80, 80125 Naples, Italy
- Dipartimento
di Ingegneria Chimica del Materiali e della Produzione Industriale
(DICMAPI), University “Federico II”, Piazzale Tecchio 80, 80125 Naples, Italy
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14
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Yuan D, Yadav S, Ta HT, Fallahi H, An H, Kashaninejad N, Ooi CH, Nguyen NT, Zhang J. Investigation of viscoelastic focusing of particles and cells in a zigzag microchannel. Electrophoresis 2021; 42:2230-2237. [PMID: 34396540 DOI: 10.1002/elps.202100126] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 07/26/2021] [Accepted: 08/05/2021] [Indexed: 12/13/2022]
Abstract
Microfluidic particle focusing has been a vital prerequisite step in sample preparation for downstream particle separation, counting, detection, or analysis, and has attracted broad applications in biomedical and chemical areas. Besides all the active and passive focusing methods in Newtonian fluids, particle focusing in viscoelastic fluids has been attracting increasing interest because of its advantages induced by intrinsic fluid property. However, to achieve a well-defined focusing position, there is a need to extend channel lengths when focusing micrometer-sized or sub-microsized particles, which would result in the size increase of the microfluidic devices. This work investigated the sheathless viscoelastic focusing of particles and cells in a zigzag microfluidic channel. Benefit from the zigzag structure of the channel, the channel length and the footprint of the device can be reduced without sacrificing the focusing performance. In this work, the viscoelastic focusing, including the focusing of 10 μm polystyrene particles, 5 μm polystyrene particles, 5 μm magnetic particles, white blood cells (WBCs), red blood cells (RBCs), and cancer cells, were all demonstrated. Moreover, magnetophoretic separation of magnetic and nonmagnetic particles after viscoelastic pre-focusing was shown. This focusing technique has the potential to be used in a range of biomedical applications.
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Affiliation(s)
- Dan Yuan
- Centre for Regional and Rural Futures, Deakin University, Geelong, Victoria, 3216, Australia
| | - Sharda Yadav
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
| | - Hang T Ta
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
| | - Hedieh Fallahi
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
| | - Hongjie An
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
| | - Navid Kashaninejad
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
| | - Chin Hong Ooi
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
| | - Nam-Trung Nguyen
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
| | - Jun Zhang
- Queensland Micro- and Nanotechnology Centre, Griffith University, Nathan, Queensland, 4111, Australia
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15
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Dignan LM, Woolf MS, Tomley CJ, Nauman AQ, Landers JP. Multiplexed Centrifugal Microfluidic System for Dynamic Solid-Phase Purification of Polynucleic Acids Direct from Buccal Swabs. Anal Chem 2021; 93:7300-7309. [PMID: 33955733 DOI: 10.1021/acs.analchem.1c00842] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
This report describes the development of a centrifugally controlled microfluidic dynamic solid-phase extraction (dSPE) platform to reliably obtain amplification-ready nucleic acids (NAs) directly from buccal swab cuttings. To our knowledge, this work represents the first centrifugal microdevice for comprehensive preparation of high-purity NAs from raw buccal swab samples. Direct-from-swab cellular lysis was integrated upstream of NA extraction, and automatable laser-controlled on-board microvalving strategies provided the strict spatiotemporal fluidic control required for practical point-of-need use. Solid-phase manipulation during extraction leveraged the application of a bidirectional rotating magnetic field to promote thorough interaction with the sample (e.g., NA capture). We illustrate the broad utility of this technology by establishing downstream compatibility of extracted nucleic acids with three noteworthy assays, namely, the polymerase chain reaction (PCR), reverse transcriptase PCR (RT-qPCR), and loop-mediated isothermal amplification (LAMP). The PCR-readiness of the extracted DNA was confirmed by generating short tandem repeat (STR) profiles following multiplexed amplification. With no changes to assay workflow, viral RNA was successfully extracted from contrived (spiked) SARS-CoV-2 swab samples, confirmed by RT-qPCR. Finally, we demonstrate the compatibility of the extracted DNA with LAMP-a technique well suited for point-of-need genetic analysis due to minimal hardware requirements and compatibility with colorimetric readout. We describe an automatable, portable microfluidic platform for the nucleic acid preparation device that could permit practical, in situ use by nontechnical personnel.
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Affiliation(s)
- Leah M Dignan
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | - M Shane Woolf
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | - Christopher J Tomley
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | - Aeren Q Nauman
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States.,TeGrex Technologies, Charlottesville, Virginia 22903, United States
| | - James P Landers
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
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16
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Mahmodi Arjmand E, Saadatmand M, Eghbal M, Bakhtiari MR, Mehraji S. A New Detection Chamber Design on Centrifugal Microfluidic Platform to Measure Hemoglobin of Whole Blood. SLAS Technol 2021; 26:392-398. [PMID: 33645315 DOI: 10.1177/2472630320985456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Undoubtedly, microfluidics has been a focal point of interdisciplinary science during the last two decades, resulting in many developments in this area. Centrifugal microfluidic platforms have good potential for use in point-of-care devices because they take advantage of some intrinsic forces, most notably centrifugal force, which obviates the need to any external driving forces. Herein, we introduce a newly designed detection chamber for use on microfluidic discs that can be employed as an absorbance readout step in cases where the final solution has a very low viscosity and surface tension. In such situations, our chamber easily eliminates the air bubbles from the final solution without any interruption. One microfluidic disc for measuring the hemoglobin concentration was designed and constructed to verify the correct functioning of this detection chamber. This disc measured the hemoglobin concentration of the blood samples via the HiCN method. Then, the hemoglobin concentration of 11 blood samples was quantified and compared with the clinic's data using the hemoglobin measurement disc, which included four hemoglobin measurement sets, and each set contained two inlets for the blood sample and the reagent, one two-part mixing chamber, and one bubble-free detection chamber. The measured values of the disc had good linearity and conformity compared with the clinic's data, and there were no air bubbles in the detection step. In this study, the standard deviation and the turnaround time were ± 0.51 g/dL and 68 s, respectively.
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Affiliation(s)
- Ehsan Mahmodi Arjmand
- Department of Chemical and Petroleum Engineering, Sharif University of Technology, Tehran, Iran
| | - Maryam Saadatmand
- Department of Chemical and Petroleum Engineering, Sharif University of Technology, Tehran, Iran
| | - Manouchehr Eghbal
- Department of Electrical Engineering and Information Technology, Iranian Research Organization for Science and Technology, Tehran, Iran
| | - Mohammad Reza Bakhtiari
- Department of Biotechnology, Iranian Research Organization for Science and Technology, Tehran, Iran
| | - Sima Mehraji
- Department of Chemical and Petroleum Engineering, Sharif University of Technology, Tehran, Iran
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17
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18
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Ozer T, McMahon C, Henry CS. Advances in Paper-Based Analytical Devices. ANNUAL REVIEW OF ANALYTICAL CHEMISTRY (PALO ALTO, CALIF.) 2020; 13:85-109. [PMID: 31986055 DOI: 10.1146/annurev-anchem-061318-114845] [Citation(s) in RCA: 138] [Impact Index Per Article: 34.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Microfluidic paper-based analytical devices (μPADs) are the newest generation of lab-on-a-chip devices and have made significant strides in both our understanding of fundamental behavior and performance characteristics and expansion of their applications. μPADs have become useful analytical techniques for environmental analysis in addition to their more common application as medical point-of-care devices. Although the most common method for device fabrication is wax printing, numerous other techniques exist and have helped address factors ranging from solvent compatibility to improved device function. This review highlights recent reports of fabrication and design, modes of detection, and broad applications of μPADs. Such advances have enabled μPADs to be used in field and laboratory studies to address critical needs in fast, cheaper measurement technologies.
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Affiliation(s)
- Tugba Ozer
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80526, USA;
- Department of Bioengineering, Yildiz Technical University, Istanbul 34220, Turkey
| | - Catherine McMahon
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80526, USA;
| | - Charles S Henry
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80526, USA;
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19
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Guo Q, Liu Y, Zhai Y, Gu Z. A fast and effective method for dissecting parasitic spores: myxozoans as an example. J Exp Biol 2020:jeb.214916. [PMID: 34005559 DOI: 10.1242/jeb.214916] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2019] [Accepted: 03/27/2020] [Indexed: 12/31/2022]
Abstract
Disassembling the parasitic spores and acquiring the main subunits is a prerequisite for deep understanding of the basic biology of parasites. Herein we present a fast and efficient method to dissect the myxospores in a few steps, which mainly involved sonication, sucrose density gradient and Percoll density gradient. We tested our method on three myxozoans species and demonstrated this method allows the dismembering of myxospores, isolation of intact and clean nematocysts and shell valves within 2h by low-cost. This new tool will facilitate subsequent analyses and enable a better understanding of the ecological and evolutionary significance of parasitic spores.
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Affiliation(s)
- Qingxiang Guo
- Department of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University, Wuhan, Hubei province, 430070, PR China
| | - Yang Liu
- Department of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University, Wuhan, Hubei province, 430070, PR China
- Hubei Engineering Technology Research Center for Aquatic Animal Diseases Control and Prevention, Wuhan, 430070, PR China
| | - Yanhua Zhai
- Department of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University, Wuhan, Hubei province, 430070, PR China
- Hubei Engineering Technology Research Center for Aquatic Animal Diseases Control and Prevention, Wuhan, 430070, PR China
| | - Zemao Gu
- Department of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University, Wuhan, Hubei province, 430070, PR China
- Hubei Engineering Technology Research Center for Aquatic Animal Diseases Control and Prevention, Wuhan, 430070, PR China
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20
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21
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Habibi S, Lee HY, Moncada-Hernandez H, Gooding J, Minerick AR. Impacts of low concentration surfactant on red blood cell dielectrophoretic responses. BIOMICROFLUIDICS 2019; 13:054101. [PMID: 31531153 PMCID: PMC6746619 DOI: 10.1063/1.5113735] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Accepted: 09/02/2019] [Indexed: 06/10/2023]
Abstract
Cell dielectrophoretic responses have been extensively studied for biomarker expression, blood typing, sepsis, circulating tumor cell separations, and others. Surfactants are often added to the analytical buffer in electrokinetic cellular microfluidic systems to lower surface/interfacial tensions. In nonelectrokinetic systems, surfactants influence cell size, shape, and agglomeration; this has not been systematically documented in electrokinetic systems. In the present work, the impacts of the Triton X-100 surfactant on human red blood cells (RBCs) were explored via ultraviolet-visible spectroscopy (UV-Vis) and dielectrophoresis (DEP) to compare nonelectrokinetic and electrokinetic responses, respectively. The UV-Vis spectra of Triton X-100 treated RBCs were dramatically different from that of native RBCs. DEP responses of RBCs were compared to RBCs treated with low concentrations of Triton X-100 (0.07-0.17 mM) to ascertain surfactant effects on dielectric properties. A star-shaped electrode design was used to quantify RBC dielectric properties by fitting a single-shell oblate cell model to experimentally-derived DEP spectra. The presence of 0.07 and 0.11 mM of Triton X-100 shifted the RBC's DEP spectra yielding lower crossover frequencies ( f C O ) . The single-shell oblate model revealed that cell radius and membrane permittivity are the dominant influencers of DEP spectral shifts. The trends observed were similar for 0.11 mM and 0.07 mM Triton X-100 treated cells. However, a further increase of Triton X-100 to 0.17 mM caused cells to only exhibit negative DEP. The magnitude of the DEP force increased with Triton X-100 concentration. This work indicates that dynamic surfactant interactions with cell membranes alter cell dielectric responses and properties.
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22
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Jiang N, Ahmed R, Damayantharan M, Ünal B, Butt H, Yetisen AK. Lateral and Vertical Flow Assays for Point-of-Care Diagnostics. Adv Healthc Mater 2019; 8:e1900244. [PMID: 31081270 DOI: 10.1002/adhm.201900244] [Citation(s) in RCA: 92] [Impact Index Per Article: 18.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2019] [Revised: 04/08/2019] [Indexed: 02/03/2023]
Abstract
Lateral flow assays (LFAs) have been the pillar of rapid point-of-care (POC) diagnostics due to their simplicity, rapid process, and low cost. Recent advances in sensitivity, selectivity, and chemical stability enhancement have ensured the foothold of LFAs in commercial POC diagnostics. This paper reviews recent developments in labeling strategies and detection methods of LFAs. Moreover, vertical flow assays (VFAs) have emerged as an alternate paper-based assay due to faster detection time and unique multiplexing capabilities. Smartphones as LFA readers have been transformed into a universal integrated platform for imaging, data processing, and storage, providing quantitative results in low-resource settings. Commercial LFAs and VFAs products are evaluated with regards to their performance, market trends, and regulatory issues. The future outlook of the flow-based assays for POC diagnostics is also discussed.
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Affiliation(s)
- Nan Jiang
- School of Engineering and Applied SciencesHarvard University Cambridge MA 02138 USA
| | - Rajib Ahmed
- School of MedicineStanford University Palo Alto CA 94304 USA
| | - Mylon Damayantharan
- School of EngineeringUniversity of Birmingham Edgbaston Birmingham B15 2TT UK
| | - Barış Ünal
- Triton Systems Inc. 200 Turnpike Rd. Chelmsford MA 01824 USA
| | - Haider Butt
- School of EngineeringUniversity of Birmingham Edgbaston Birmingham B15 2TT UK
| | - Ali K. Yetisen
- Department of Chemical EngineeringImperial College London London SW7 2AZ UK
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23
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Sohrabi Kashani A, Packirisamy M. Efficient Low Shear Flow-based Trapping of Biological Entities. Sci Rep 2019; 9:5511. [PMID: 30940862 PMCID: PMC6445139 DOI: 10.1038/s41598-019-41938-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Accepted: 03/11/2019] [Indexed: 11/09/2022] Open
Abstract
Capturing cells or biological entities is an important and challenging step toward in-vitro studies of cells under a precisely controlled microscale environment. In this work, we have developed a compact and efficient microdevice for on-chip trapping of micro-sized particles. This hydrodynamics-based trapping system allows the isolation of polystyrene micro-particles with a shorter time while inducing a less hydrodynamic deformation and stress on the particles or cells both after and before trapping. A numerical simulation was carried out to design a hydrodynamic trapping mechanism and optimize the geometric and fluidic parameters affecting the trapping efficiency of the microfluidic network. By using the finite element analysis, the velocity field, pressure field, and hydrodynamic force on the micro particles were studied. Finally, a PDMS microfluidic device was fabricated to test the device's ability to trap polystyrene microspheres. Computational fluid analysis and experimental testing showed a high trapping efficiency that is more than 90%. This microdevice can be used for single cell studies including their biological, physical and chemical characterization.
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Affiliation(s)
- Ahmad Sohrabi Kashani
- Optical Bio Microsystem Lab, Mechanical, Industrial, and Aerospace Engineering Department, Concordia University, Montreal, Quebec, H3G 1M8, Canada
| | - Muthukumaran Packirisamy
- Optical Bio Microsystem Lab, Mechanical, Industrial, and Aerospace Engineering Department, Concordia University, Montreal, Quebec, H3G 1M8, Canada.
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24
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Saraf N, Villegas M, Willenberg BJ, Seal S. Multiplex Viral Detection Platform Based on a Aptamers-Integrated Microfluidic Channel. ACS OMEGA 2019; 4:2234-2240. [PMID: 30729227 PMCID: PMC6358057 DOI: 10.1021/acsomega.8b03277] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Accepted: 01/11/2019] [Indexed: 05/02/2023]
Abstract
A polydimethylsiloxane-based microfluidic device has been developed for the multiplex detection of viral envelope proteins such as Zika and chikungunya on a single platform using aptamer-analyte interactions. The channel is integrated with microsized pillars that increase the surface area allowing more aptamers to attach to the incoming envelope protein molecules, thus increasing the overall sensitivity of the system. The working of the device depends on the formation of protein-mediated sandwich morphology that is obtained using an aptamer and aptamer-functionalized gold nanoparticle (AuNP) pair. The colorimetric signal is obtained upon introduction of silver reagents into the channel, which are selectively deposited on the AuNP surface, providing a gray contrast in the testing zone. The microfluidic channel approach successfully detected clinically relevant concentrations of Zika and chikungunya envelope proteins in phosphine-buffered saline (1 pM) and calf blood (100 pM) with high specificity using gold-decorated aptamers integrated in a microfluidic channel.
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Affiliation(s)
- Nileshi Saraf
- Advanced
Materials Processing and Analysis Centre, Department of
Materials Science and Engineering, Department of Internal Medicine, College of
Medicine, and Nanoscience Technology Centre, University
of Central Florida, Orlando, Florida 32827, United States
| | - Michael Villegas
- University
of Florida, Gainesville, Florida 32611, United
States
| | - Bradley Jay Willenberg
- Advanced
Materials Processing and Analysis Centre, Department of
Materials Science and Engineering, Department of Internal Medicine, College of
Medicine, and Nanoscience Technology Centre, University
of Central Florida, Orlando, Florida 32827, United States
| | - Sudipta Seal
- Advanced
Materials Processing and Analysis Centre, Department of
Materials Science and Engineering, Department of Internal Medicine, College of
Medicine, and Nanoscience Technology Centre, University
of Central Florida, Orlando, Florida 32827, United States
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25
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Malbec R, Chami B, Aeschbach L, Ruiz Buendía GA, Socol M, Joseph P, Leïchlé T, Trofimenko E, Bancaud A, Dion V. µLAS: Sizing of expanded trinucleotide repeats with femtomolar sensitivity in less than 5 minutes. Sci Rep 2019; 9:23. [PMID: 30631115 PMCID: PMC6328573 DOI: 10.1038/s41598-018-36632-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2018] [Accepted: 11/23/2018] [Indexed: 11/09/2022] Open
Abstract
We present µLAS, a lab-on-chip system that concentrates, separates, and detects DNA fragments in a single module. µLAS speeds up DNA size analysis in minutes using femtomolar amounts of amplified DNA. Here we tested the relevance of µLAS for sizing expanded trinucleotide repeats, which cause over 20 different neurological and neuromuscular disorders. Because the length of trinucleotide repeats correlates with the severity of the diseases, it is crucial to be able to size repeat tract length accurately and efficiently. Expanded trinucleotide repeats are however genetically unstable and difficult to amplify. Thus, the amount of amplified material to work with is often limited, making its analysis labor-intensive. We report the detection of heterogeneous allele lengths in 8 samples from myotonic dystrophy type 1 and Huntington disease patients with up to 750 CAG/CTG repeats in five minutes or less. The high sensitivity of the method allowed us to minimize the number of amplification cycles and thus reduce amplification artefacts without compromising the detection of the expanded allele. These results suggest that µLAS can speed up routine molecular biology applications of repetitive sequences and may improve the molecular diagnostic of expanded repeat disorders.
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Affiliation(s)
- Rémi Malbec
- LAAS-CNRS, Université de Toulouse, CNRS, Toulouse, 31031, France
| | - Bayan Chami
- LAAS-CNRS, Université de Toulouse, CNRS, Toulouse, 31031, France
| | - Lorène Aeschbach
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Bâtiment Génopode, Lausanne, 1015, Switzerland
| | - Gustavo A Ruiz Buendía
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Bâtiment Génopode, Lausanne, 1015, Switzerland
| | - Marius Socol
- LAAS-CNRS, Université de Toulouse, CNRS, Toulouse, 31031, France
| | - Pierre Joseph
- LAAS-CNRS, Université de Toulouse, CNRS, Toulouse, 31031, France
| | - Thierry Leïchlé
- LAAS-CNRS, Université de Toulouse, CNRS, Toulouse, 31031, France
| | - Evgeniya Trofimenko
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Bâtiment Génopode, Lausanne, 1015, Switzerland
- Department of Physiology, University of Lausanne, Rue du Bugnon 7, Lausanne, 1005, Switzerland
| | - Aurélien Bancaud
- LAAS-CNRS, Université de Toulouse, CNRS, Toulouse, 31031, France.
| | - Vincent Dion
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Bâtiment Génopode, Lausanne, 1015, Switzerland.
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26
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Nunna BB, Mandal D, Lee JU, Zhuang S, Lee ES. Sensitivity Study of Cancer Antigens (CA-125) Detection Using Interdigitated Electrodes Under Microfluidic Flow Condition. BIONANOSCIENCE 2019. [DOI: 10.1007/s12668-018-0589-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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27
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Lei W, Hou G, Liu M, Rong Q, Xu Y, Tian Y, Jiang L. High-speed transport of liquid droplets in magnetic tubular microactuators. SCIENCE ADVANCES 2018; 4:eaau8767. [PMID: 30627667 PMCID: PMC6317984 DOI: 10.1126/sciadv.aau8767] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Accepted: 11/19/2018] [Indexed: 05/21/2023]
Abstract
Magnetic field-induced droplet actuation has attracted substantial research interest in recent years. However, current magnetic-controlled liquids depend primarily on magnetic particles added to a droplet, which serves as the actuator on an open surface. These liquids inevitably suffer from droplet splitting with the magnetic particles or disengaging with the magnet, possibly leading to sample contamination, which severely limits their transport speed and practical applications. Here, we report a simple and additive-free method to fabricate magnetic tubular microactuators for manipulating liquid droplets by magnetism-induced asymmetric deformation, which generates an adjustable capillary force to propel liquids. These magnetic tubular microactuators can drive various liquid droplets with controllable velocity and direction. A speed of 10 cm s-1 can be achieved, representing the highest speed of liquid motion driven by an external stimulus-induced capillary force in a closed tube found so far.
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Affiliation(s)
- Wenwei Lei
- Key Laboratory of Bio-Inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing 100191, P. R. China
| | - Guanglei Hou
- Key Laboratory of Bio-Inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
| | - Mingjie Liu
- Key Laboratory of Bio-Inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing 100191, P. R. China
- Beijing Advanced Innovation Center for Biomedical Engineering, Beihang University, Beijing 100191, P. R. China
| | - Qinfeng Rong
- Key Laboratory of Bio-Inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing 100191, P. R. China
| | - Yichao Xu
- Key Laboratory of Bio-Inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing 100191, P. R. China
- Beijing Advanced Innovation Center for Biomedical Engineering, Beihang University, Beijing 100191, P. R. China
| | - Ye Tian
- Key Laboratory of Bio-Inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
| | - Lei Jiang
- Key Laboratory of Bio-Inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing 100191, P. R. China
- Key Laboratory of Bio-Inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
- Beijing Advanced Innovation Center for Biomedical Engineering, Beihang University, Beijing 100191, P. R. China
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28
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Sima F, Kawano H, Miyawaki A, Kelemen L, Ormos P, Wu D, Xu J, Midorikawa K, Sugioka K. 3D Biomimetic Chips for Cancer Cell Migration in Nanometer-Sized Spaces Using "Ship-in-a-Bottle" Femtosecond Laser Processing. ACS APPLIED BIO MATERIALS 2018; 1:1667-1676. [PMID: 34996216 DOI: 10.1021/acsabm.8b00487] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Cancer cells undergo dramatic morphology changes when migrating in confined spaces narrower than their diameter during metastasis, and thus it is necessary to understand the deformation mechanism and associated molecular events in order to study tumor progression. To this end, we propose a new biochip with three-dimensional (3D) polymer nanostructures in a closed glass microfluidic chip. "Ship-in-a-bottle" femtosecond laser processing is an exclusive technique to flexibly create 3D small details in biochips. The wavefront correction by the spatial light modulator significantly improves the fabrication resolution of this technique. The device could then accommodate defect-free 3D biomimetic nanoconfigurations for the evaluation of prostate cancer cell migration in confined spaces. Specifically, polymeric channels with widths of ∼900 nm, which is more than one order of magnitude smaller than the cell size, are integrated by femtosecond laser inside glass channels. The cells are responsive to an in-channel gradient of epidermal growth factor and can migrate a distance greater than 20 μm. After migration, the cells suffer partial cytokinesis, followed by fusion of the divided parts back into single cell bodies.
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Affiliation(s)
- Felix Sima
- RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.,CETAL, National Institute for Lasers, Plasma and Radiation Physics, Magurele, Ilfov 00175, Romania
| | | | | | - Lorand Kelemen
- Biological Research Centre, Institute of Biophysics, Hungarian Academy of Sciences, Temesvári krt. 62, Szeged 6726, Hungary
| | - Pal Ormos
- Biological Research Centre, Institute of Biophysics, Hungarian Academy of Sciences, Temesvári krt. 62, Szeged 6726, Hungary
| | - Dong Wu
- RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Jian Xu
- RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Katsumi Midorikawa
- RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Koji Sugioka
- RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
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Hischen F, Buchberger G, Plamadeala C, Armbruster O, Heiss E, Winands K, Schwarz M, Jüttler B, Heitz J, Baumgartner W. The external scent efferent system of selected European true bugs (Heteroptera): a biomimetic inspiration for passive, unidirectional fluid transport. J R Soc Interface 2018; 15:20170975. [PMID: 29593087 PMCID: PMC5908534 DOI: 10.1098/rsif.2017.0975] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2017] [Accepted: 03/08/2018] [Indexed: 11/21/2022] Open
Abstract
In this work, we present structured capillaries that were inspired by the microstructures of the external scent efferent system as found in different European true bug species (Pentatomidae and Cydnidae). These make use of small, orientated structures in order to facilitate fluid movement towards desired areas where defensive substances are evaporated. Gland channels and microstructures were investigated by means of scanning electron microscopy and abstracted into three-dimensional models. We used these models to create scent channel replicas from different technical substrates (steel and polymers) by means of laser ablation, laser structuring and casting. Video analysis of conducted fluid-flow experiments showed that bug-inspired, artificial scent fluid channels can indeed transport different fluids (water solutions and oils/lubricants) passively in one direction (velocities of up to 1 mm s-1), while halting the fluid movement in the opposite direction. At the end of this contribution, we present a physical theory that explains the observed fluid transport and sets the rules for performance optimization in future work.
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Affiliation(s)
- Florian Hischen
- Institute for Biomedical Mechatronics, Johannes Kepler University Linz, Altenberger Straße 69, 4070 Linz, Austria
| | - Gerda Buchberger
- Institute for Biomedical Mechatronics, Johannes Kepler University Linz, Altenberger Straße 69, 4070 Linz, Austria
| | - Cristina Plamadeala
- Institute for Applied Physics, Johannes Kepler University Linz, Altenberger Straße 69, 4070 Linz, Austria
| | - Oskar Armbruster
- Institute for Applied Physics, Johannes Kepler University Linz, Altenberger Straße 69, 4070 Linz, Austria
| | - Ernst Heiss
- Tiroler Landesmuseum, Josef-Schraffl-Straße 2a, 6020 Innsbruck, Austria
| | - Kai Winands
- Fraunhofer Institute for Production Technology IPT, Steinbachstraße 17, 52047 Aachen, Germany
| | - Martin Schwarz
- Oberösterreichisches Landesmuseum, Johann-Wilhelm-Klein-Straße 73, 4040 Linz, Austria
| | - Bert Jüttler
- Institute for Applied Geometry, Johannes Kepler University Linz, Altenberger Straße 69, 4070 Linz, Austria
| | - Johannes Heitz
- Institute for Applied Physics, Johannes Kepler University Linz, Altenberger Straße 69, 4070 Linz, Austria
| | - Werner Baumgartner
- Institute for Biomedical Mechatronics, Johannes Kepler University Linz, Altenberger Straße 69, 4070 Linz, Austria
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30
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Abd Rahman N, Ibrahim F, Ainehvand MM, Yusof R, Madou M. An Effect of Magnetic Beads to Boesenbergia rotunda Antioxidant Activity Using Photoprotective Microfluidic CD. IFMBE PROCEEDINGS 2018:139-144. [DOI: 10.1007/978-981-10-7554-4_24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
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31
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Abstract
The development of microfabricated devices that will provide high-throughput quantitative data and high resolution in a fast, repeatable and reproducible manner is essential for plant biology research.
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Affiliation(s)
- Meltem Elitaş
- Department of Mechatronics
- Faculty of Engineering and Natural Sciences
- Sabanci University
- 34956, Istanbul
- Turkey
| | - Meral Yüce
- Nanotechnology Research and Application Centre
- Sabanci University
- 34956, Istanbul
- Turkey
| | - Hikmet Budak
- Department of Molecular Biology
- Genetics and Bioengineering
- Faculty of Engineering and Natural Sciences
- Sabanci University
- 34956, Istanbul
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32
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Galliker P, Schneider J, Rüthemann L, Poulikakos D. Open-atmosphere sustenance of highly volatile attoliter-size droplets on surfaces. Proc Natl Acad Sci U S A 2013; 110:13255-60. [PMID: 23898173 PMCID: PMC3746916 DOI: 10.1073/pnas.1305886110] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The controlled formation and handling of minute liquid volumes on surfaces is essential to the success of microfluidics in biology, chemistry, and materials applications. Even though current methods have demonstrated their potential in a variety of experimental assays, there remain significant difficulties concerning breadth of applicability, standardization, throughput, and economics. Here we introduce a unique microfluidic paradigm in which microscopic volatile droplets are formed, sustained, and manipulated in size and content at any desired spot on unpatterned substrates. Their sustainability is warranted by continuous replacement of the rapidly vaporizing sessile fluid through controlled equivalent volume deposition of smaller discrete liquid entities by an electrohydrodynamic nanodripping process. Using nanoparticle inks we show that the concentration of solutes in so-stabilized droplets can be linearly increased at isochoric conditions and user-defined rates. An intriguing insensitivity of the droplet shape toward surface heterogeneities ensures robustness and experimental reproducibility, even when handling attoliter quantities. The unique capabilities and technical simplicity of the presented method introduce a high degree of flexibility and make it pertinent to a diverse range of applications.
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Affiliation(s)
| | | | - Lukas Rüthemann
- Laboratory of Thermodynamics in Emerging Technologies, Department of Mechanical and Process Engineering, Eidgenössische Technische Hochschule Zürich (ETH Zurich), CH-8092 Zurich, Switzerland
| | - Dimos Poulikakos
- Laboratory of Thermodynamics in Emerging Technologies, Department of Mechanical and Process Engineering, Eidgenössische Technische Hochschule Zürich (ETH Zurich), CH-8092 Zurich, Switzerland
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