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For:	Chen Y, Wu G, Zhao Y. Gut Microbiota and Alimentary Tract Injury. Adv Exp Med Biol 2020;1238:11-22. [PMID: 32323177 DOI: 10.1007/978-981-15-2385-4_2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]

Number

Cited by Other Article(s)

Komodromou I, Andreou E, Vlahoyiannis A, Christofidou M, Felekkis K, Pieri M, Giannaki CD. Exploring the Dynamic Relationship between the Gut Microbiome and Body Composition across the Human Lifespan: A Systematic Review. Nutrients 2024;16:660. [PMID: 38474787 DOI: 10.3390/nu16050660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 02/20/2024] [Accepted: 02/26/2024] [Indexed: 03/14/2024] Open

Li H, Hu Y, Huang Y, Ding S, Zhu L, Li X, Lan M, Huang W, Lin X. The mutual interactions among Helicobacter pylori, chronic gastritis, and the gut microbiota: a population-based study in Jinjiang, Fujian. Front Microbiol 2024;15:1365043. [PMID: 38419635 PMCID: PMC10899393 DOI: 10.3389/fmicb.2024.1365043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Accepted: 01/29/2024] [Indexed: 03/02/2024] Open

Abstract

Objectives

Helicobacter pylori (H. pylori) is a type of bacteria that infects the stomach lining, and it is a major cause of chronic gastritis (CG). H. pylori infection can influence the composition of the gastric microbiota. Additionally, alterations in the gut microbiome have been associated with various health conditions, including gastrointestinal disorders. The dysbiosis in gut microbiota of human is associated with the decreased secretion of gastric acid. Chronic atrophic gastritis (CAG) and H. pylori infection are also causes of reduced gastric acid secretion. However, the specific details of how H. pylori infection and CG, especially for CAG, influence the gut microbiome can vary and are still an area of ongoing investigation. The incidence of CAG and infection rate of H. pylori has obvious regional characteristics, and Fujian Province in China is a high incidence area of CAG as well as H. pylori infection. We aimed to characterize the microbial changes and find potential diagnostic markers associated with infection of H. pylori as well as CG of subjects in Jinjiang City, Fujian Province, China.

Participants

Enrollment involved sequencing the 16S rRNA gene in fecal samples from 176 cases, adhering to stringent inclusion and exclusion criteria. For our study, we included healthy volunteers (Normal), individuals with chronic non-atrophic gastritis (CNAG), and those with CAG from Fujian, China. The aim was to assess gut microbiome dysbiosis based on various histopathological features. QIIME and LEfSe analyses were performed. There were 176 cases, comprising 126 individuals who tested negative for H. pylori and 50 who tested positive defined by C14 urea breath tests and histopathological findings in biopsies obtained through endoscopy. CAG was also staged by applying OLGIM system.

Results

When merging the outcomes from 16S rRNA gene sequencing results, there were no notable variations in alpha diversity among the following groups: Normal, CNAG, and CAG; OLGIM I and OLGIM II; and H. pylori positive [Hp (+)] and H. pylori negative [Hp (-)] groups. Beta diversity among different groups show significant separation through the NMDS diagrams. LEfSe analyses confirmed 2, 3, and 6 bacterial species were in abundance in the Normal, CNAG, and CAG groups; 26 and 2 species in the OLGIM I and OLGIM II group; 22 significant phylotypes were identified in Hp (+) and Hp (-) group, 21 and 1, respectively; 9 bacterial species exhibited significant differences between individuals with CG who were Hp (+) and those who were Hp (-).

Conclusion

The study uncovered notable distinctions in the characteristics of gut microbiota among the following groups: Normal, CNAG, and CAG; OLGIM I and OLGIM II; and Hp (+) and Hp (-) groups. Through the analysis of H. pylori infection in CNAG and CAG groups, we found the gut microbiota characteristics of different group show significant difference because of H. pylori infection. Several bacterial genera could potentially serve as diagnostic markers for H. pylori infection and the progression of CG.

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Affiliation(s)

Hanjing Li College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China
Yingying Hu College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China
Yanyu Huang College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China
Shanshan Ding College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China
Long Zhu College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China
Xinghui Li College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China
Meng Lan College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China
Weirong Huang Jinjiang Hospital of Traditional Chinese Medicine Affiliated to Fujian University of Traditional Chinese Medicine, Jinjiang, China
Xuejuan Lin College of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China Research Base of Traditional Chinese Medicine Syndrome, Fujian University of Traditional Chinese Medicine, Fuzhou, China Key Laboratory of Traditional Chinese Medicine Health Status Identification, Fuzhou, China

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Peng YC, Zhao XH, Zeng CF, Xu JX, Qi LN, Li LQ. Integrated omics analysis: the relationship between significantly increased Klebsiella post-hepatectomy and decreased hub-metabolite 3-methyl-2-oxobutanoic acid is associated with induced liver failure. J Gastrointest Oncol 2022;13:326-343. [PMID: 35284109 PMCID: PMC8899754 DOI: 10.21037/jgo-21-906] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Accepted: 01/19/2022] [Indexed: 03/12/2024] Open

Aguilera M, Rossini V, Hickey A, Simnica D, Grady F, Felice VD, Moloney A, Pawley L, Fanning A, McCarthy L, O’Mahony SM, Cryan JF, Nally K, Shanahan F, Melgar S. Inflammasome Signaling Regulates the Microbial-Neuroimmune Axis and Visceral Pain in Mice. Int J Mol Sci 2021;22:ijms22158336. [PMID: 34361102 PMCID: PMC8371481 DOI: 10.3390/ijms22158336] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Revised: 07/21/2021] [Accepted: 07/27/2021] [Indexed: 12/13/2022] Open

Affiliation(s)

Mònica Aguilera APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Valerio Rossini APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Ana Hickey APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.) School of Biochemistry and Cell Biology, University College Cork, T12 YT20 Cork, Ireland
Donjete Simnica APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Fiona Grady APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Valeria D. Felice APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.) Department of Anatomy and Neuroscience, University College Cork, T12 YT20 Cork, Ireland
Amy Moloney APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Lauren Pawley APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.) Department of Anatomy and Neuroscience, University College Cork, T12 YT20 Cork, Ireland
Aine Fanning APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Lorraine McCarthy APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Siobhan M. O’Mahony APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.) Department of Anatomy and Neuroscience, University College Cork, T12 YT20 Cork, Ireland
John F. Cryan APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.) Department of Anatomy and Neuroscience, University College Cork, T12 YT20 Cork, Ireland
Ken Nally APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.) School of Biochemistry and Cell Biology, University College Cork, T12 YT20 Cork, Ireland
Fergus Shanahan APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.)
Silvia Melgar APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland; (M.A.); (V.R.); (A.H.); (D.S.); (F.G.); (V.D.F.); (A.M.); (L.P.); (A.F.); (L.M.); (S.M.O.); (J.F.C.); (K.N.); (F.S.) Correspondence: ; Tel.: +353-21-4901384

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