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Kondakova EA, Bogdanova VA, Ottesen O, Alexandrov AA. The development of the digestive system and the fate of the yolk syncytial layer in postembryogenesis of Stenodus leucichthys nelma (Teleostei). J Morphol 2023; 284:e21604. [PMID: 37313770 DOI: 10.1002/jmor.21604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 05/13/2023] [Accepted: 05/19/2023] [Indexed: 06/15/2023]
Abstract
Stenodus leucichthys nelma is an economically important species for cold-water aquaculture. Unlike other Coregoninae, S. leucichthys nelma is a piscivore. Here, we describe in detail the development of the digestive system and the yolk syncytial layer from hatching to early juvenile stage using histological and histochemical methods to determine their common and specific characteristics and to test the hypothesis that the digestive system of S. leucichthys nelma rapidly acquires adult features. The digestive tract differentiates at hatching and starts to function before the transition to mixed feeding. The mouth and anus are open, mucous cells and taste buds are present in the buccopharyngeal cavity and esophagus, pharyngeal teeth have erupted, the stomach primordium is seen, the intestinal epithelium with mucous cells is folded and the intestinal valve is observed; the epithelial cells of the postvalvular intestine contain supranuclear vacuoles. The liver blood vessels are filled with blood. The cells of exocrine pancreas are loaded with zymogen granules, and at least two islets of Langerhans are present. However, the larvae remain dependent on maternal yolk and lipids for a long time. The adult features of the digestive system develop gradually, the most significant changes take place approximately from 31 to 42 days posthatching. Then, the gastric glands and pyloric caeca buds appear, the U-shaped stomach with glandular and aglandular regions develops, the swim bladder inflates, the number of islets of Langerhans increases, the pancreas becomes scattered, and the yolk syncytial layer undergoes programmed death during the larval-to-juvenile transition. During postembryonic development, the mucous cells of the digestive system contain neutral mucosubstances.
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Affiliation(s)
- Ekaterina A Kondakova
- Saint Petersburg State University, Saint Petersburg, Russia
- Saint Petersburg Branch of the FSBSI «VNIRO» («GosNIORKH» named after L.S. Berg), Saint Petersburg, Russia
| | - Vera A Bogdanova
- Saint Petersburg Branch of the FSBSI «VNIRO» («GosNIORKH» named after L.S. Berg), Saint Petersburg, Russia
| | - Oddvar Ottesen
- Faculty of Bioscience and Aquaculture, Nord University, Bodø, Norway
- Akvatik AS, Bodø, Norway
| | - Alexey A Alexandrov
- Saint Petersburg Branch of the FSBSI «VNIRO» («GosNIORKH» named after L.S. Berg), Saint Petersburg, Russia
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2
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Bernardello M, Gora RJ, Van Hage P, Castro-Olvera G, Gualda EJ, Schaaf MJM, Loza-Alvarez P. Analysis of intracellular protein dynamics in living zebrafish embryos using light-sheet fluorescence single-molecule microscopy. BIOMEDICAL OPTICS EXPRESS 2021; 12:6205-6227. [PMID: 34745730 PMCID: PMC8547987 DOI: 10.1364/boe.435103] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 08/25/2021] [Accepted: 08/25/2021] [Indexed: 06/13/2023]
Abstract
Single-molecule microscopy techniques have emerged as useful tools to image individual molecules and analyze their dynamics inside cells, but their application has mostly been restricted to cell cultures. Here, a light-sheet fluorescence microscopy setup is presented for imaging individual proteins inside living zebrafish embryos. The optical configuration makes this design accessible to many laboratories and a dedicated sample-mounting system ensures sample viability and mounting flexibility. Using this setup, we have analyzed the dynamics of individual glucocorticoid receptors, which demonstrates that this approach creates multiple possibilities for the analysis of intracellular protein dynamics in intact living organisms.
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Affiliation(s)
- Matteo Bernardello
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, Castelldefels, 08860, Spain
- Equal contribution
| | - Radoslaw J Gora
- Institute of Biology, Leiden University, Leiden, The Netherlands
- Equal contribution
| | - Patrick Van Hage
- Institute of Biology, Leiden University, Leiden, The Netherlands
| | - Gustavo Castro-Olvera
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, Castelldefels, 08860, Spain
| | - Emilio J Gualda
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, Castelldefels, 08860, Spain
| | - Marcel J M Schaaf
- Institute of Biology, Leiden University, Leiden, The Netherlands
- Equal contribution
| | - Pablo Loza-Alvarez
- ICFO-Institut de Ciencies Fotoniques, The Barcelona Institute of Science and Technology, Castelldefels, 08860, Spain
- Equal contribution
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3
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Weston LJ, Cook ZT, Stackhouse TL, Sal MK, Schultz BI, Tobias ZJC, Osterberg VR, Brockway NL, Pizano S, Glover G, Weissman TA, Unni VK. In vivo aggregation of presynaptic alpha-synuclein is not influenced by its phosphorylation at serine-129. Neurobiol Dis 2021; 152:105291. [PMID: 33556542 PMCID: PMC10405908 DOI: 10.1016/j.nbd.2021.105291] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2021] [Revised: 01/30/2021] [Accepted: 02/03/2021] [Indexed: 12/12/2022] Open
Abstract
Abnormal aggregation of the α-synuclein protein is a key molecular feature of Parkinson's disease and other neurodegenerative diseases. The precise mechanisms that trigger α-synuclein aggregation are unclear, and it is not known what role aggregation plays in disease pathogenesis. Here we use an in vivo zebrafish model to express several different forms of human α-synuclein and measure its aggregation in presynaptic terminals. We show that human α-synuclein tagged with GFP can be expressed in zebrafish neurons, localizing normally to presynaptic terminals and undergoing phosphorylation at serine-129, as in mammalian neurons. The visual advantages of the zebrafish system allow for dynamic in vivo imaging to study α-synuclein, including the use of fluorescence recovery after photobleaching (FRAP) techniques to probe protein mobility. These experiments reveal three distinct terminal pools of α-synuclein with varying mobility, likely representing different subpopulations of aggregated and non-aggregated protein. Human α-synuclein is phosphorylated by an endogenous zebrafish Polo-like kinase activity, and there is a heterogeneous population of neurons containing either very little or extensive phosphorylation throughout the axonal arbor. Both pharmacological and genetic manipulations of serine-129 show that phosphorylation of α-synuclein at this site does not significantly affect its mobility. This suggests that serine-129 phosphorylation alone does not promote α-synuclein aggregation. Together our results show that human α-synuclein can be expressed and measured quantitatively in zebrafish, and that disease-relevant post-translational modifications occur within neurons. The zebrafish model provides a powerful in vivo system for measuring and manipulating α-synuclein function and aggregation, and for developing new treatments for neurodegenerative disease.
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Affiliation(s)
- Leah J Weston
- Lewis & Clark College, Biology Department, Portland, OR 97219, USA
| | - Zoe T Cook
- Lewis & Clark College, Biology Department, Portland, OR 97219, USA
| | | | - Mehtab K Sal
- Lewis & Clark College, Biology Department, Portland, OR 97219, USA
| | | | | | - Valerie R Osterberg
- Department of Neurology, Oregon Health & Science University, Portland, OR, 97239, USA
| | | | - Saheli Pizano
- Lewis & Clark College, Biology Department, Portland, OR 97219, USA
| | - Greta Glover
- Lewis & Clark College, Biology Department, Portland, OR 97219, USA
| | | | - Vivek K Unni
- Department of Neurology, Oregon Health & Science University, Portland, OR, 97239, USA
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4
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Functional Analysis of the Promoter Region of Japanese Flounder ( Paralichthys olivaceus) β-actin Gene: A Useful Tool for Gene Research in Marine Fish. Int J Mol Sci 2018; 19:ijms19051401. [PMID: 29738459 PMCID: PMC5983668 DOI: 10.3390/ijms19051401] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Revised: 04/21/2018] [Accepted: 05/02/2018] [Indexed: 12/16/2022] Open
Abstract
A newly isolated Japanese flounder (Paralichthys olivaceus) β-actin promoter and its derivative compact construct Poβ-actinΔ−1080/−801Δ−500/−201 have recently been demonstrated to promote ectopic gene expression in cell lines. Different Poβ-actin promoter deletion mutants were constructed and functionally characterized. Mutational analyses by dual-luciferase detected that three regulatory elements, including one enhancer (−1399/−1081) and two silencers (−1080/−801, −500/−201) in the first intron. The sequence located at −1399/−1081 was determined to significantly affect promoter activity. Additionally, the first exon (−1489/−1400) could also remarkably promote the β-actin promoter activity. In the following transduction application, we removed the two silencers and generated a compact reconstruct promoter/enhancer (Poβ-actinΔ−1080/−801Δ−500/−201), which exhibited relatively stronger promoter activity compared with Poβ-actin. Furthermore, the green fluorescent protein (GFP) transgenic stable flounder cell line was obtained by the reconstructed Poβ-actinΔ−1080/−801Δ−500/−201 promoter. Our study provided the potential application of Japanese flounder β-actin, particularly Poβ-actinΔ−1080/−801Δ−500/−201, in ectopic gene expression in the future.
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The yolk syncytial layer of loach, Misgurnus fossilis (Teleostei) during early development. ZYGOTE 2017; 25:489-497. [DOI: 10.1017/s0967199417000314] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
SummaryThe yolk syncytial layer (YSL) of Teleostei is a dynamic multifunctional temporary system. This paper describes the YSL structure of Misgurnus fossilis (Cobitidae) during its early developmental stages, studied using histological methods. YSL formation is prolonged. From the late blastula stage, the basal surface of the YSL is uneven and has protuberances, but becomes smoother during development. There are syncytial ‘islands’ with 1–2 yolk syncytial nuclei in the yolk mass. During epiboly, gastrulation and early segmentation, loach YSL is of different thickness in different regions along the dorso-ventral and antero-posterior axes of an embryo. The YSL is thickened in the dorsal region of gastrulae compared with the ventral region. Although the development of M. fossilis is similar to the development of zebrafish, there are important differences in YSL formation and organization that await further study and analysis. The study of YSL organization contributes to our knowledge of teleost developmental diversity and to the biology of temporary structures.
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Kondakova EA, Efremov VI, Nazarov VA. Structure of the yolk syncytial layer in Teleostei and analogous structures in animals of the meroblastic type of development. BIOL BULL+ 2016. [DOI: 10.1134/s1062359016030055] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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7
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Kondakova EAA, Efremov VII. Morphofunctional transformations of the yolk syncytial layer during zebrafish development. J Morphol 2013; 275:206-16. [DOI: 10.1002/jmor.20209] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2013] [Revised: 08/11/2013] [Accepted: 09/05/2013] [Indexed: 12/14/2022]
Affiliation(s)
| | - Vladimir Ivanovich I. Efremov
- Department of Embryology, Faculty of Biology and Soil Science; Saint-Petersburg State University; St.-Petersburg Russia
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Mosimann C, Puller AC, Lawson KL, Tschopp P, Amsterdam A, Zon LI. Site-directed zebrafish transgenesis into single landing sites with the phiC31 integrase system. Dev Dyn 2013; 242:949-963. [PMID: 23723152 PMCID: PMC3775328 DOI: 10.1002/dvdy.23989] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/14/2013] [Indexed: 12/12/2022] Open
Abstract
BACKGROUND Linear DNA-based and Tol2-mediated transgenesis are powerful tools for the generation of transgenic zebrafish. However, the integration of multiple copies or transgenes at random genomic locations complicates comparative transgene analysis and makes long-term transgene stability unpredictable with variable expression. Targeted, site-directed transgene integration into pre-determined genomic loci can circumvent these issues. The phiC31 integrase catalyzes the unidirectional recombination reaction between heterotypic attP and attB sites and is an efficient platform for site-directed transgenesis. RESULTS We report the implementation of the phiC31 integrase-mediated attP/attB recombination for site-directed zebrafish transgenics of attB-containing transgene vectors into single genomic attP landing sites. We generated Tol2-based single-insertion attP transgenic lines and established their performance in phiC31 integrase-catalyzed integration of an attB-containing transgene vector. We found stable germline transmission into the next generation of an attB reporter transgene in 34% of all tested animals. We further characterized two functional attP landing site lines and determined their genomic location. Our experiments also demonstrate tissue-specific transgene applications as well as long-term stability of phiC31-mediated transgenes. CONCLUSIONS Our results establish phiC31 integrase-controlled site-directed transgenesis into single, genomic attP sites as space-, time-, and labor-efficient zebrafish transgenesis technique. The described reagents are available for distribution to the zebrafish community.
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Affiliation(s)
- Christian Mosimann
- Howard Hughes Medical Institute, Boston, MA 02115, USA
- Stem Cell Program, Children’s Hospital Boston, Boston, MA 02115, USA
- Division of Hematology/Oncology, Children’s Hospital Boston, Harvard Stem Cell Institute, Harvard Medical School, Boston, MA 02115, USA
| | - Ann-Christin Puller
- Howard Hughes Medical Institute, Boston, MA 02115, USA
- Stem Cell Program, Children’s Hospital Boston, Boston, MA 02115, USA
- Division of Hematology/Oncology, Children’s Hospital Boston, Harvard Stem Cell Institute, Harvard Medical School, Boston, MA 02115, USA
| | - Katy L. Lawson
- Howard Hughes Medical Institute, Boston, MA 02115, USA
- Stem Cell Program, Children’s Hospital Boston, Boston, MA 02115, USA
- Division of Hematology/Oncology, Children’s Hospital Boston, Harvard Stem Cell Institute, Harvard Medical School, Boston, MA 02115, USA
| | - Patrick Tschopp
- Department of Genetics, Harvard Medical School, Boston, MA 02115, USA
| | - Adam Amsterdam
- Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02319, USA
| | - Leonard I. Zon
- Howard Hughes Medical Institute, Boston, MA 02115, USA
- Stem Cell Program, Children’s Hospital Boston, Boston, MA 02115, USA
- Division of Hematology/Oncology, Children’s Hospital Boston, Harvard Stem Cell Institute, Harvard Medical School, Boston, MA 02115, USA
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9
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Lee SY, Kim DS, Nam YK. Molecular characterization of fast skeletal muscle-specific myosin light chain 2 gene (mlc2f) in marine medaka Oryzias dancena. Genes Genomics 2013. [DOI: 10.1007/s13258-013-0071-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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10
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Cho YS, Lee SY, Kim YK, Kim DS, Nam YK. Functional ability of cytoskeletal β-actin regulator to drive constitutive and ubiquitous expression of a fluorescent reporter throughout the life cycle of transgenic marine medaka Oryzias dancena. Transgenic Res 2011; 20:1333-55. [PMID: 21437716 DOI: 10.1007/s11248-011-9501-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2010] [Accepted: 02/20/2011] [Indexed: 01/16/2023]
Abstract
Marine medaka Oryzias dancena, a candidate model organism, represents many attractive merits as a material for experimental transgenesis and/or heterologous expression assay particularly in the field of ecotoxicology and developmental biology. In this study, cytoskeletal β-actin gene was characterized from O. dancena and the functional capability of its promoter to drive constitutive expression of foreign reporter protein was evaluated. The O. dancena β-actin gene possessed a conserved genomic organization of vertebrate major cytoplasmic actin genes and the bioinformatic analysis of its 5'-upstream regulatory region predicted various transcription factor binding motifs. Heterologous expression assay using a red fluorescent protein (RFP) reporter construct driven by the O. dancena β-actin regulator resulted in stunningly bright expression of red fluorescence signals in not only microinjected embryos but also grown-up transgenic adults. Although founder transgenics exhibited mosaic patterns of RFP expression, transgenic offspring in subsequent generations displayed a vivid and uniform expression of RFP continually from embryos to adults. Based on the blot hybridization assays, two transgenic lines established in this study were proven to possess high copy numbers of transgene integrants (approximately 240 and 34 copies, respectively), and the transgenic genotype in both lines could successfully be passed stably up to three generations, although the rate of transgene transmission in one of the two transgenic lines was significantly lower than expected Mendelian ratio. Significant red fluorescence color could be ubiquitously observable in all the tissues or organs of the transgenics. Quantitative real-time RT-PCR represented that the expression pattern of transgene under the regulation of β-actin promoter would resemble, in overall, the regulation of endogenous β-actin gene in adult tissues, although putative mechanism for competitive or independent regulation between transgene and endogenous gene could also be found in several tissues. Results from this study undoubtedly indicate that the O. dancena β-actin promoter would be powerful enough to fluorescently visualize most cell types in vivo throughout its whole lifespan. This study could be a useful start point for a variety of transgenic experiments with this species concerning the constitutive expression of living fluorescent color reporters and other foreign proteins.
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MESH Headings
- Actins/genetics
- Actins/metabolism
- Animal Structures/cytology
- Animal Structures/metabolism
- Animals
- Animals, Genetically Modified/genetics
- Animals, Genetically Modified/metabolism
- Blotting, Southern
- Cloning, Molecular
- Computational Biology
- Cytoskeleton/genetics
- Cytoskeleton/metabolism
- Embryo, Nonmammalian/cytology
- Embryo, Nonmammalian/embryology
- Embryo, Nonmammalian/metabolism
- Embryonic Development
- Female
- Fish Proteins/genetics
- Fish Proteins/metabolism
- Gene Dosage
- Gene Expression Regulation, Developmental
- Gene Library
- Genes, Reporter
- Genetic Vectors/genetics
- Genetic Vectors/metabolism
- Inheritance Patterns
- Luminescent Proteins/genetics
- Luminescent Proteins/metabolism
- Male
- Microinjections
- Microscopy, Fluorescence
- Oryzias/embryology
- Oryzias/genetics
- Oryzias/metabolism
- Promoter Regions, Genetic
- Reverse Transcriptase Polymerase Chain Reaction/methods
- Transcription Factors/genetics
- Transcription Factors/metabolism
- Transgenes
- Red Fluorescent Protein
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Affiliation(s)
- Young Sun Cho
- Institute of Marine Living Modified Organisms, Pukyong National University, Busan 608-737, Korea
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11
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Cows I, Bolland J, Nunn A, Kerins G, Stein J, Blackburn J, Hart A, Henry C, Britton JR, Coop G, Peeler E. Defining environmental risk assessment criteria for genetically modified fishes to be placed on the EU market. ACTA ACUST UNITED AC 2010. [DOI: 10.2903/sp.efsa.2010.en-69] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- I.G. Cows
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - J.D. Bolland
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - A.D. Nunn
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - G. Kerins
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - J. Stein
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - J. Blackburn
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - A. Hart
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - C. Henry
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - J. R. Britton
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - G. Coop
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
| | - E. Peeler
- Hull International Fisheries Institute, Food and Environmental Research Agency, Bournemouth University, Center for Environment, Fisheries and Aquaculture Science
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12
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The yolk syncytial layer in early zebrafish development. Trends Cell Biol 2010; 20:586-92. [DOI: 10.1016/j.tcb.2010.06.009] [Citation(s) in RCA: 112] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2010] [Revised: 06/28/2010] [Accepted: 06/28/2010] [Indexed: 11/30/2022]
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13
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[Cloning of the promoter region of Leuciscus Merzbacheri beta-actin gene and detection of its function]. YI CHUAN = HEREDITAS 2009; 31:1029-36. [PMID: 19840925 DOI: 10.3724/sp.j.1005.2009.01029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
To utilize the gene resources of Leuciscus merzbacheri, a 2,398 bp (SZ21) DNA fragment including the 5'-flanking region and partial open reading frame of the beta-actin gene was obtained through PCR amplification. SZ21 includes a regulatory sequence which contains the 5'-proximal promoter, the first, the second and the third exons and the partial fourth exon sequence. The 5'-proximal promoter region is critical for transcription activity including the CAAT box, TATA box and CArG box. The analysis of putative transcription binding sites of the promoter by on-line software revealed the presence of the critical transcription binding sites (such as E-box, RU49, ZBPF, CEBP and CREB). CMV promoter for eukaryote vector pEGFP-N1-AFP III was destroyed by Aat II digestion. SZ21 regulatory sequence was inserted into the vector pEGFP-N1-AFP III (with destroyed CMV) that can express green fluorescence protein, and beta2 pEGFP-N1-AFP III recombination vector was constructed. Linearized beta2 pEGFP-N1-AFP III was transfected into BHK-21 cell through lipofectin. EGFP expression of the transgenic cell was observed by micro fluoroscope. The results indicated that the cloned Leuciscus merzbacheri beta-actin gene promoter SZ21 has the activity to switch on the EGFP expression in mammal cell, and has a con-tinued starting expression activity passing on from generation to generation in green fluorescence cell. In addition, the SZ21 target fragment was detected in the BHK-21 green fluorescence cell genomic DNA by PCR. This suggested that the SZ21 promoter of beta-actin gene has effective transcription activity and can promote the expression of foreign gene.
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Feng H, Cheng J, Luo J, Liu SJ, Liu Y. Cloning of black carp beta-actin gene and primarily detecting the function of its promoter region. ACTA ACUST UNITED AC 2009; 33:133-40. [PMID: 16529297 DOI: 10.1016/s0379-4172(06)60032-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
A 3 338 bp DNA fragment including the open reading frame and 5'-flanking region of beta-actin gene for black carp genome was obtained through PCR amplification. Analysis of the sequencing results indicated the ORF of black carp beta-actin gene encoding a 375 amino acid protein that shares a high degree of conservation to other known actins. The black carp beta-actin sequence showed 100% identity to common carp, grass carp, and zebrafish, 99.2% identity to human and Norway rat beta-actin gene, 98.9% and 98.1% identity to chicken and Kenyan clawed frog beta-actin gene, respectively. The promoter region of black carp beta-actin gene was inserted into the promoterless pEGFP1 vector. The recombinant plasmid was microinjected into the fertilized eggs of mud loach before two-cell stage as well as transfected into HeLa cell line. GFP expression was found in 50% of mud loach embryos and 2/3 HeLa cells. The GFP expression could be observed in every part of the mud loach embryos, and in some embryos, the GFP was expressed in the whole body. Thus, the usefulness of black carp beta-actin promoter as a ubiquitous expression promoter was confirmed using the EGFP as a reporter gene.
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Affiliation(s)
- Hao Feng
- Key Lab of Protein Chemistry and Developmental Biology of the Educational Department of China, College of Life Science, Hunan Normal University, Changsha 410081, China
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15
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Rajesh R, Majumdar KC. The growth hormone-encoding gene isolated and characterized from Labeo rohita Hamilton is expressed in CHO cells under the control of constitutive promoters in 'autotransgene' constructs. FISH PHYSIOLOGY AND BIOCHEMISTRY 2008; 34:413-436. [PMID: 18958599 DOI: 10.1007/s10695-008-9201-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2007] [Accepted: 01/04/2008] [Indexed: 05/27/2023]
Abstract
The growth hormone (GH) gene along with its regulatory sequences has been isolated from the blood and pituitary gland of Labeo rohita. This GH gene is approximately 2.8 kb long and consists of five exons and four introns of varying sizes with AG/TA in its exon-intron junctions. The promoter has a single cyclic AMP response unit (CRE) element, TATA, CAT and several Pit 1 binding sequences. The 1169-bp gene transcript starts 54 bp upstream of the ATG initiation codon and has two polyadenylation signals, ATTAAA, after the TAG stop codon. The mature mRNA has the poly (A) tail inserted 16 bp downstream of the second polyadenylation signal. Four chimeric 'autotransgenes' were constructed having either histone 3 or beta-actin promoter and cDNA or the total GH gene. The functionality of the individual components of the autotransgene was determined in the Chinese hamster ovary (CHO) cells by transfection experiments. Based on the results, the transcription of the GH gene is initiated at the transcription start signal of the respective promoters and terminates at the 3' regulatory sequence of the GH gene. Expression of GH in CHO cells shows that the fish promoters are active, the splicing signal is recognized, and the mRNA produced is stable and translated. The GH protein produced is effectively translocated and secreted into the medium. These results indicate the usefulness of CHO cells in determining the property of individual components of autotransgenes constructed from L. rohita and overall functional commonality between fish and mammal.
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Affiliation(s)
- R Rajesh
- Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad, India
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16
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Andreeva LE, Khaidarova NV, Sleptsova LA, Rodriges-Blanco EV, Dicheva MA, Dvoryanchikov GA, Tarantul VZ. The effect of regulatory sequences of αSl-casein gene on the expression of the lacZ-gene in loach Misgurnus fossilis L. transgenic embryos. RUSS J GENET+ 2008. [DOI: 10.1134/s1022795408070156] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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17
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Hwang G, Müller F, Rahman MA, Williams DW, Murdock PJ, Pasi KJ, Goldspink G, Farahmand H, Maclean N. Fish as bioreactors: transgene expression of human coagulation factor VII in fish embryos. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2004; 6:485-492. [PMID: 15129328 DOI: 10.1007/s10126-004-3121-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2003] [Accepted: 02/11/2004] [Indexed: 05/24/2023]
Abstract
A plasmid containing human coagulation factor VII (hFVII) complementary DNA regulated by a cytomegalovirus promoter was microinjected into fertilized eggs of zebrafish, African catfish, and tilapia. The active form of hFVll was detected in the fish embryos by various assays. This positive expression of human therapeutic protein in fish embryos demonstrates the possibility of exploitation of transgenic fish as bioreactors.
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Affiliation(s)
- Gyulin Hwang
- Division of Cell Sciences, School of Biological Sciences, University of Southampton, Bassett Crescent East, Southampton, SO16 7PX, UK
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18
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Uzbekova S, Amoros C, Cauty C, Mambrini M, Perrot E, Hew CL, Chourrout D, Prunet P. Analysis of cell-specificity and variegation of transgene expression driven by salmon prolactin promoter in stable lines of transgenic rainbow trout. Transgenic Res 2003; 12:213-27. [PMID: 12739889 DOI: 10.1023/a:1022904015029] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
In order to identify the specificity and functionality of salmon prolactin (sPRL) promoter, transgenic rainbow trout carrying a construct comprising the 2.4 kb fragment of the 5' flanking region of Atlantic Chinook sPRL gene fused either to the reporter genes cat (sPRL-cat) or lacZ (sPRL-lacZ) were produced. sPRL-cat in transgenic F0 fish expressed strongly CAT only in the pituitary gland. Transgenic in F1-F4 lines harbouring sPRL-lacZ expressed beta-galactosidase (beta-gal) only in the follicular PRL-producing cells of the adenohypophysis. We observed heterocellular, mosaic distribution of beta-gal within PRL cell population and enormous variation of lacZ expression level between the littermates in the same transgenic line. Regardless of the transgene copy number, age or sex of transgenic fish, beta-gal expression was lactotroph-specific but variegated in all the nine F2 hemizygous lines analysed. One line harbouring a multicopy integration was followed up to F4 generation: the transgene was transmitted without modifications. Analysis of genomic DNA from pituitaries showed that lacZ sequences were highly methylated. LacZ expression was low and its transcripts, analysed by in situ hybridisation, showed a mosaic distribution within the pituitary gland. These data suggest that variegated expression of lacZ can occur at the transcription level owing to the silencing effect of lacZ gene. After proving the tissue-specific expression of reporter genes driven by the sPRL promoter, we tried to obtain the genetic ablation of PRL-producing cells,by transferring the same construct comprising diphtheria toxin DT-A gene (tox). However, the high mortality rate of sPRL-tox transformed embryos has embedded this study and no transgenic fish expressing tox were produced. The appropriateness of using transgenic strategies to analyse gene function in Salmonids is discussed, especially the implications of the multicopy integration patterns and of the variegated transgene expression.
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Affiliation(s)
- Svetlana Uzbekova
- Station Commune de Recherche en Ichtyophysiologie, Biodiversité et Environnement, Institut National de la Recherche Agronomique, Campus de Beaulieu, 35042 Rennes Cedex, France.
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19
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Krasnov A, Teerijoki H, Gorodilov Y, Mölsä H. Cloning of rainbow trout (Oncorhynchus mykiss) alpha-actin, myosin regulatory light chain genes and the 5'-flanking region of alpha-tropomyosin. Functional assessment of promoters. J Exp Biol 2003; 206:601-8. [PMID: 12502780 DOI: 10.1242/jeb.00116] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
We report PCR cloning of rainbow trout alpha-actin (alpha-OnmyAct), myosin regulatory light chain (OnmyMLC2) genes and the 5'-flanking region of alpha-tropomyosin (alpha-OnmyTM). Being expressed in skeletal and cardiac muscle, alpha-OnmyAct was a predominant isoform in trunk muscle of adult rainbow trout. Exon structure of this gene was identical to all known vertebrate skeletal and to some of the cardiac alpha-Act genes. Two distinct OnmyMLC2 promoters were cloned and both included transposon-like sequences. The coding part of OnmyMLC2 consisted of seven exons whose length was typical for vertebrate MLC2 genes. The upstream regions of alpha-OnmyAct and OnmyMLC2 included a TATA box and a number of putative regulatory motifs (E-boxes in all three sequences and CArG-boxes in alpha-OnmyAct), whereas there were no canonical motifs in the alpha-OnmyTM promoter. LacZ reporter gene was fused with the 5'-flanking regions of alpha-OnmyAct, two OnmyMLC2 genes and alpha-OnmyTM promoters. These constructs were transferred into rainbow trout eggs. At the stage of 39 somite pairs, LacZ reporter was detected in the myotomes, neural plate and neural crest, brain and yolk syncytial layer of all analysed embryos. alpha-OnmyTMLacZ was also expressed in the heart. Functionality of promoters and the alpha-OnmyAct terminator was confirmed in rainbow trout primary embryonic cell cultures. We cloned rainbow trout glucose transporter type I (OnmyGLUT1) into vectors including the alpha-OnmyAct and OnmyMLC2 promoters and the alpha-SkAct terminator. Recombinant OnmyGLUT1 transcripts were detected in rainbow trout embryos during somitogenesis.
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Affiliation(s)
- Aleksei Krasnov
- Institute of Applied Biotechnology, University of Kuopio, POB 1627, FIN-Kuopio 70211, Finland.
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20
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Hwang GL, Azizur Rahman M, Abdul Razak S, Sohm F, Farahmand H, Smith A, Brooks C, Maclean N. Isolation and characterisation of tilapia beta-actin promoter and comparison of its activity with carp beta-actin promoter. BIOCHIMICA ET BIOPHYSICA ACTA 2003; 1625:11-8. [PMID: 12527420 DOI: 10.1016/s0167-4781(02)00534-1] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
The regulatory sequence including proximal promoter, untranslated exon 1 and intron 1 of the beta-actin gene from tilapia (Oreochromis niloticus) has been isolated and spliced to a beta-galactosidase reporter gene to test its activity. Comparisons of promoter activity have been carried out with three different constructs: (1) 1.6 kb tilapia beta-actin regulatory sequence, (2) 1.5 kb carp beta-actin regulatory sequence, and (3) 4.7 kb carp beta-actin regulatory sequence. Although the 1.6 kb tilapia beta-actin regulatory sequence gave slightly different expression patterns in tilapia embryos assayed by in situ X-gal staining, no difference was observed in expression level when the tilapia sequence was compared with the 4.7 kb carp beta-actin regulatory sequence by quantitative assay. In comparison with the 1.5 kb carp beta-actin regulatory sequence, the 1.6 kb tilapia beta-actin regulatory sequence gave higher expression levels in tilapia embryos, while a reverse result was observed in zebrafish embryos. In cell transfection experiments, the 1.6 kb tilapia beta-actin regulatory sequence showed three to four times better activity in blue gill cells than either the 4.7 kb carp beta-actin or the 1.5 kb carp beta-actin regulatory sequences. The 1.6 kb tilapia beta-actin regulatory sequence also drove higher reporter gene activity in somatic cells of tilapia than did the 4.7 kb carp beta-actin regulatory sequence following direct injection of constructs into muscle. Therefore, taken together, the data demonstrate that the tilapia beta-actin promoter can be used as an efficient regulatory sequence to produce autotransgenic tilapia.
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Affiliation(s)
- Gyu-Lin Hwang
- Division of Cell Sciences, School of Biological Sciences, University of Southampton, UK
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21
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Müller F, Blader P, Strähle U. Search for enhancers: teleost models in comparative genomic and transgenic analysis of cis regulatory elements. Bioessays 2002; 24:564-72. [PMID: 12111739 DOI: 10.1002/bies.10096] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Homology searches between DNA sequences of evolutionary distant species (phylogenetic footprinting) offer a fast detection method for regulatory sequences. Because of the small size of their genomes, tetraodontid species such as the Japanese pufferfish and green spotted pufferfish have become attractive models for comparative genomics. A disadvantage of the tetraodontid species is, however, that they cannot be bred and manipulated routinely under laboratory conditions, so these species are less attractive for developmental and genetic analysis. In contrast, an increasing arsenal of transgene techniques with the developmental model species zebrafish and medaka are being used for functional analysis of cis regulatory sequences. The main disadvantage is the much larger genome. While comparison between many loci proved the suitability of phylogenetic footprinting using fish and mammalian sequences, fast rate of change in enhancer structure and gene duplication within teleosts may obscure detection of homologies. Here we discuss the contribution and potentials provided by different teleost models for the detection and functional analysis of conserved cis-regulatory elements.
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Affiliation(s)
- Ferenc Müller
- Institute of Toxicology and Genetics, Research Center Karlsruhe, Germany.
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22
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Molina A, Iyengar A, Marins LF, Biemar F, Hanley S, Maclean N, Smith TJ, Martial JA, Muller M. Gene structure and promoter function of a teleost ribosomal protein: a tilapia (Oreochromis mossambicus) L18 gene. BIOCHIMICA ET BIOPHYSICA ACTA 2001; 1520:195-202. [PMID: 11566355 DOI: 10.1016/s0167-4781(01)00272-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
We have cloned and characterized a tilapia (Oreochromis mossambicus) L18 ribosomal protein gene, including the complete transcribed region and 488 bp of upstream regulatory sequences. We have also isolated two L18 cDNAs from another tilapia (Oreochromis niloticus) with a few conservative nucleotide differences. Our results suggest the presence of two genes in both species. Reporter constructs were tested for transient expression in CV1 cells and in microinjected zebrafish and tilapia embryos. The tilapia L18 promoter was able to drive expression of the reporter gene in all three experiments, with no apparent preference for a particular tissue. The tilapia L18 promoter is therefore likely to be a powerful tool to drive tissue-independent gene expression in fish.
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Affiliation(s)
- A Molina
- Laboratoire de Biologie Moléculaire et de Génie Génétique, Université de Liège, Institut de Chemie B6, Sart-Tilman, Belgium
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23
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Drivenes O, Seo HC, Fjose A. Characterisation of the promoter region of the zebrafish six7 gene. BIOCHIMICA ET BIOPHYSICA ACTA 2000; 1491:240-7. [PMID: 10760585 DOI: 10.1016/s0167-4781(00)00042-7] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
The Drosophila homeobox gene sine oculis and its murine homologue Six3 have both been shown to have regulatory functions in eye and brain development. In zebrafish, three Six3-related genes with conserved expression during early eye and head formation have been identified. One of these, six7, is first expressed at the gastrula stage in the involuting axial mesoderm, and later in the overlying neuroectoderm from which the forebrain and optic primordium develop. To elucidate the mechanisms regulating six7 expression, we isolated a 2.7-kb fragment of the 5'-flanking region. Three sequentially deleted fragments of this upstream region were used to produce GFP reporter constructs for analysis of tissue-specific expression in zebrafish embryos. The results show that a 625-bp upstream fragment is sufficient to direct strong expression of the reporter during gastrulation and early neurulation. The proximal part of the promoter contains binding sites for various constitutive transcription factors and an additional upstream element that was shown to be critical in directing expression to the anterior region of the zebrafish brain.
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Affiliation(s)
- O Drivenes
- Department of Molecular Biology, University of Bergen, P.O. Box 7800, N-5020, Bergen, Norway
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24
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Adám A, Bártfai R, Lele Z, Krone PH, Orbán L. Heat-inducible expression of a reporter gene detected by transient assay in zebrafish. Exp Cell Res 2000; 256:282-90. [PMID: 10739675 DOI: 10.1006/excr.2000.4805] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Heat-inducibility of two reporter constructs expressing lacZ gene under the control of mouse and Xenopus hsp70 promoters was tested in zebrafish (Danio rerio) embryos using a transient expression system. Cells expressing beta-galactosidase were stained blue by histochemical staining and their average number per embryo was used as an indicator of the expression level of the reporter gene. Both constructs were heat-inducible in the embryonic tissues and showed similar heat dependence (increasing expression levels from 35-36 degrees C up to 39 degrees C with an apparent decrease at 40 degrees C), resembling that of the zebrafish hsp70 genes. However, their induction kinetics were different, which might be due to differences in their 5' UTRs. Spatial expression patterns of the two hsp/lacZ constructs and an endogenous hsp70 gene were mostly similar on the RNA level. These results indicate that our approach is applicable for in vivo analysis of the heat-shock response and that exogenous heat-shock promoters may be useful for inducible expression of transgenes in fish.
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Affiliation(s)
- A Adám
- Laboratory of Aquatic Molecular Biology, Agricultural Biotechnology Center, Gödöllo, Hungary
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25
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Müller F, Chang B, Albert S, Fischer N, Tora L, Strähle U. Intronic enhancers control expression of zebrafish sonic hedgehog in floor plate and notochord. Development 1999; 126:2103-16. [PMID: 10207136 DOI: 10.1242/dev.126.10.2103] [Citation(s) in RCA: 109] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
The signalling molecule Sonic hedgehog (Shh) controls a wide range of differentiation processes during vertebrate development. Numerous studies have suggested that the absolute levels as well as correct spatial and temporal expression of shh are critical for its function. To investigate the regulation of shh expression, we have studied the mechanism controlling its spatial expression in the zebrafish. We employed an enhancer screening strategy in zebrafish embryos based on co-injection of putative enhancer sequences with a reporter construct and analysis of mosaic expression in accumulated expression maps. Enhancers were identified in intron 1 and 2 that mediate floor plate and notochord expression. These enhancers also drive notochord and floor plate expression in the mouse embryo strongly suggesting that the mechanisms controlling shh expression in the midline are conserved between zebrafish and mouse. Functional analysis in the zebrafish embryo revealed that the intronic enhancers have a complex organisation. Two activator regions, ar-A and ar-C, were identified in intron 1 and 2, respectively, which mediate mostly notochord and floor plate expression. In contrast, another activating region, ar-B, in intron 1 drives expression in the floor plate. Deletion fine mapping of ar-C delineated three regions of 40 bp to be essential for activity. These regions do not contain binding sites for HNF3beta, the winged helix transcription factor previously implicated in the regulation of shh expression, indicating the presence of novel regulatory mechanisms. A T-box transcription factor-binding site was found in a functionally important region that forms specific complexes with protein extracts from wild-type but not from notochord-deficient mutant embryos.
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Affiliation(s)
- F Müller
- Institut de Genetique et de Biologie Moleculaire et Cellulaire, CNRS/INSERM/ULP, BP 163, CU de Strasbourg, France
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26
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Affiliation(s)
- N Maclean
- School of Biological Sciences, University of Southampton, Hampshire, UK.
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Alam MS, Lavender FL, Iyengar A, Rahman MA, Ayad HH, Lathe R, Morley SD, Maclean N. Comparison of the activity of carp and rat beta-actin gene regulatory sequences in tilapia and rainbow trout embryos. Mol Reprod Dev 1996; 45:117-22. [PMID: 8914067 DOI: 10.1002/(sici)1098-2795(199610)45:2<117::aid-mrd2>3.0.co;2-w] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
A comparative study on the level of expression of lacZ reporter constructs driven by equivalent carp and rat beta-actin regulatory sequences was carried out in embryos of tilapia and rainbow trout. DNA was microinjected into fertilised tilapia and rainbow trout eggs and the embryos/fry were assayed at various developmental stages for beta-galactosidase expression. We provide evidence to demonstrate that the carp beta-actin promoter/ lacZ reporter gene is expressed at higher levels than the equivalent rat beta-actin construct in both species.
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Affiliation(s)
- M S Alam
- Department of Biology, School of Biological Sciences, University of Southampton, United Kingdom
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29
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Iyengar A, Müller F, Maclean N. Regulation and expression of transgenes in fish -- a review. Transgenic Res 1996; 5:147-66. [PMID: 8673142 DOI: 10.1007/bf01969704] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Transgenic fish, owing to a number of advantages which they offer over other species, are proving to be valuable model systems for the study of gene regulation and development genetics in addition to being useful targets for the genetic manipulation of commercially important traits. Despite having begun only a decade ago, the production of transgenic fish has become commonplace in a number of laboratories world-wide and considerable progress has been made. In this review, we initially consider the various regulatory elements and coding genes which have been used in fish, and subsequently discuss and compare both the transient and long-term fate and expression patterns of injected DNA sequences in the context of the different factors which are likely to have an effect on the expression of transgenes.
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Affiliation(s)
- A Iyengar
- Department of Biology, School of Biological Sciences, University of Southampton, UK
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