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Debruyne A, Okkelman IA, Heymans N, Pinheiro C, Hendrix A, Nobis M, Borisov SM, Dmitriev RI. Live Microscopy of Multicellular Spheroids with the Multimodal Near-Infrared Nanoparticles Reveals Differences in Oxygenation Gradients. ACS NANO 2024; 18:12168-12186. [PMID: 38687976 PMCID: PMC11100290 DOI: 10.1021/acsnano.3c12539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 04/06/2024] [Accepted: 04/15/2024] [Indexed: 05/02/2024]
Abstract
Assessment of hypoxia, nutrients, metabolite gradients, and other hallmarks of the tumor microenvironment within 3D multicellular spheroid and organoid models represents a challenging analytical task. Here, we report red/near-infrared (NIR) emitting cell staining with O2-sensitive nanoparticles, which enable measurements of spheroid oxygenation on a conventional fluorescence microscope. Nanosensor probes, termed "MMIR" (multimodal infrared), incorporate an NIR O2-sensitive metalloporphyrin (PtTPTBPF) and deep red aza-BODIPY reference dyes within a biocompatible polymer shell, allowing for oxygen gradient quantification via fluorescence ratio and phosphorescence lifetime readouts. We optimized staining techniques and evaluated the nanosensor probe characteristics and cytotoxicity. Subsequently, we applied nanosensors to the live spheroid models based on HCT116, DPSCs, and SKOV3 cells, at rest, and treated with drugs affecting cell respiration. We found that the growth medium viscosity, spheroid size, and formation method influenced spheroid oxygenation. Some spheroids produced from HCT116 and dental pulp stem cells exhibited "inverted" oxygenation gradients, with higher core oxygen levels than the periphery. This contrasted with the frequently encountered "normal" gradient of hypoxia toward the core caused by diffusion. Further microscopy analysis of spheroids with an "inverted" gradient demonstrated metabolic stratification of cells within spheroids: thus, autofluorescence FLIM of NAD(P)H indicated the formation of a glycolytic core and localization of OxPhos-active cells at the periphery. Collectively, we demonstrate a strong potential of NIR-emitting ratiometric nanosensors for advanced microscopy studies targeting live and quantitative real-time monitoring of cell metabolism and hypoxia in complex 3D tissue models.
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Affiliation(s)
- Angela
C. Debruyne
- Tissue
Engineering and Biomaterials Group, Department of Human Structure
and Repair, Faculty of Medicine and Health Sciences, Ghent University, C. Heymanslaan 10, 9000 Ghent, Belgium
| | - Irina A. Okkelman
- Tissue
Engineering and Biomaterials Group, Department of Human Structure
and Repair, Faculty of Medicine and Health Sciences, Ghent University, C. Heymanslaan 10, 9000 Ghent, Belgium
- Ghent
Light
Microscopy Core, Ghent University, 9000 Ghent, Belgium
| | - Nina Heymans
- Tissue
Engineering and Biomaterials Group, Department of Human Structure
and Repair, Faculty of Medicine and Health Sciences, Ghent University, C. Heymanslaan 10, 9000 Ghent, Belgium
| | - Cláudio Pinheiro
- Laboratory
of Experimental Cancer Research, Department of Human Structure and
Repair, Ghent University, 9000 Ghent, Belgium
- Cancer
Research Institute Ghent (CRIG), 9000 Ghent, Belgium
| | - An Hendrix
- Laboratory
of Experimental Cancer Research, Department of Human Structure and
Repair, Ghent University, 9000 Ghent, Belgium
- Cancer
Research Institute Ghent (CRIG), 9000 Ghent, Belgium
| | - Max Nobis
- Intravital
Imaging Expertise Center, VIB Center for Cancer Biology, KU Leuven, 3000 Leuven, Belgium
| | - Sergey M. Borisov
- Institute
of Analytical Chemistry and Food Chemistry, Graz University of Technology, Stremayrgasse 9, Graz 8010, Austria
| | - Ruslan I. Dmitriev
- Tissue
Engineering and Biomaterials Group, Department of Human Structure
and Repair, Faculty of Medicine and Health Sciences, Ghent University, C. Heymanslaan 10, 9000 Ghent, Belgium
- Ghent
Light
Microscopy Core, Ghent University, 9000 Ghent, Belgium
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2
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Nanocomposite Hydrogels as Functional Extracellular Matrices. Gels 2023; 9:gels9020153. [PMID: 36826323 PMCID: PMC9957407 DOI: 10.3390/gels9020153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 01/31/2023] [Accepted: 02/08/2023] [Indexed: 02/16/2023] Open
Abstract
Over recent years, nano-engineered materials have become an important component of artificial extracellular matrices. On one hand, these materials enable static enhancement of the bulk properties of cell scaffolds, for instance, they can alter mechanical properties or electrical conductivity, in order to better mimic the in vivo cell environment. Yet, many nanomaterials also exhibit dynamic, remotely tunable optical, electrical, magnetic, or acoustic properties, and therefore, can be used to non-invasively deliver localized, dynamic stimuli to cells cultured in artificial ECMs in three dimensions. Vice versa, the same, functional nanomaterials, can also report changing environmental conditions-whether or not, as a result of a dynamically applied stimulus-and as such provide means for wireless, long-term monitoring of the cell status inside the culture. In this review article, we present an overview of the technological advances regarding the incorporation of functional nanomaterials in artificial extracellular matrices, highlighting both passive and dynamically tunable nano-engineered components.
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McKeegan PJ, Boardman SF, Wanless AA, Boyd G, Warwick LJ, Lu J, Gnanaprabha K, Picton HM. Intracellular oxygen metabolism during bovine oocyte and preimplantation embryo development. Sci Rep 2021; 11:21245. [PMID: 34711892 PMCID: PMC8553752 DOI: 10.1038/s41598-021-99512-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 08/24/2021] [Indexed: 11/11/2022] Open
Abstract
We report a novel method to profile intrcellular oxygen concentration (icO2) during in vitro mammalian oocyte and preimplantation embryo development using a commercially available multimodal phosphorescent nanosensor (MM2). Abattoir-derived bovine oocytes and embryos were incubated with MM2 in vitro. A series of inhibitors were applied during live-cell multiphoton imaging to record changes in icO2 associated with mitochondrial processes. The uncoupler carbonyl cyanide-p-trifluoromethoxyphenylhydrazone (FCCP) uncouples mitochondrial oxygen consumption to its maximum, while antimycin inhibits complex III to ablate mitochondrial oxygen consumption. Increasing oxygen consumption was expected to reduce icO2 and decreasing oxygen consumption to increase icO2. Use of these inhibitors quantifies how much oxygen is consumed at basal in comparison to the upper and lower limits of mitochondrial function. icO2 measurements were compared to mitochondrial DNA copy number analysed by qPCR. Antimycin treatment increased icO2 for all stages tested, suggesting significant mitochondrial oxygen consumption at basal. icO2 of oocytes and preimplantation embryos were unaffected by FCCP treatment. Inner cell mass icO2 was lower than trophectoderm, perhaps reflecting limitations of diffusion. Mitochondrial DNA copy numbers were similar between stages in the range 0.9-4 × 106 copies and did not correlate with icO2. These results validate the MM2 probe as a sensitive, non-toxic probe of intracellular oxygen concentration in mammalian oocytes and preimplantation embryos.
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Affiliation(s)
- Paul J McKeegan
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK.
- Centre for Anatomical and Human Sciences, Hull York Medical School, University of Hull, Hull, HU6 7RX, UK.
| | - Selina F Boardman
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK
- CARE Fertility, Manchester, England, UK
| | - Amy A Wanless
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK
- Assisted Conception Unit, Ninewells Hospital, Dundee, Scotland, UK
| | - Grace Boyd
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK
- Department of Biological Sciences, University of York, Wentworth Way, York, YO10 5DD, England, UK
| | - Laura J Warwick
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK
- St James's University Hospital, Beckett Street, Leeds, LS9 7TF, England, UK
| | - Jianping Lu
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK
| | - Keerthi Gnanaprabha
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK
- GCRM Fertility, 21 Fifty Pitches Way, Glasgow, G51 4FD, Scotland, UK
| | - Helen M Picton
- Reproduction and Early Development Research Group, Leeds Institute of Cardiovascular and Metabolic Medicine, School of Medicine, University of Leeds, Clarendon Way, Leeds, LS2 9JT, UK
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Thomas H, Fries F, Gmelch M, Bärschneider T, Kroll M, Vavaleskou T, Reineke S. Purely Organic Microparticles Showing Ultralong Room Temperature Phosphorescence. ACS OMEGA 2021; 6:13087-13093. [PMID: 34056458 PMCID: PMC8158833 DOI: 10.1021/acsomega.1c00785] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/11/2021] [Accepted: 04/09/2021] [Indexed: 06/12/2023]
Abstract
Currently, organic phosphorescent particles are heavily used in sensing and imaging. Up to now, most of these particles contain poisonous and/or expensive metal complexes. Environmentally friendly systems are therefore highly desired. A purely amorphous system consisting of poly(methyl methacrylate) particles with incorporated N,N,N',N'-tetrakis(4-carboxyphenyl)benzidine emitter molecules is presented in this work. Single particles with sizes between 400 and 840 nm show-depending on the environment-bright fluorescence and phosphorescence. The latter is observed when oxygen is not in the proximity of the emitting dye molecules. These particles can scavenge singlet oxygen, which is produced during the photoexcitation process, by incorporating it into the polymer matrix. This renders their use to be unharmful for the surrounding matter with possible application in marking schemes for living bodies.
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Affiliation(s)
- Heidi Thomas
- Technische
Universität Dresden, Dresden Integrated Center for Applied
Physics and Photonic Materials (IAPP), Nöthnitzer Str. 61, 01187 Dresden, Germany
| | - Felix Fries
- Technische
Universität Dresden, Dresden Integrated Center for Applied
Physics and Photonic Materials (IAPP), Nöthnitzer Str. 61, 01187 Dresden, Germany
| | - Max Gmelch
- Technische
Universität Dresden, Dresden Integrated Center for Applied
Physics and Photonic Materials (IAPP), Nöthnitzer Str. 61, 01187 Dresden, Germany
| | - Toni Bärschneider
- Technische
Universität Dresden, Dresden Integrated Center for Applied
Physics and Photonic Materials (IAPP), Nöthnitzer Str. 61, 01187 Dresden, Germany
| | - Martin Kroll
- Technische
Universität Dresden, Dresden Integrated Center for Applied
Physics and Photonic Materials (IAPP), Nöthnitzer Str. 61, 01187 Dresden, Germany
| | - Thaleia Vavaleskou
- Johann
Wolfgang Goethe-Universität Frankfurt am Main, Institut für
Anorganische und Analytische Chemie, Max-von-Laue-Straße 7, 60438 Frankfurt am Main, Germany
| | - Sebastian Reineke
- Technische
Universität Dresden, Dresden Integrated Center for Applied
Physics and Photonic Materials (IAPP), Nöthnitzer Str. 61, 01187 Dresden, Germany
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5
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Zhuang M, Joshi S, Sun H, Batabyal T, Fraser CL, Kapur J. Difluoroboron β-diketonate polylactic acid oxygen nanosensors for intracellular neuronal imaging. Sci Rep 2021; 11:1076. [PMID: 33441771 PMCID: PMC7806623 DOI: 10.1038/s41598-020-80172-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Accepted: 12/17/2020] [Indexed: 11/08/2022] Open
Abstract
Critical for metabolism, oxygen plays an essential role in maintaining the structure and function of neurons. Oxygen sensing is important in common neurological disorders such as strokes, seizures, or neonatal hypoxic-ischemic injuries, which result from an imbalance between metabolic demand and oxygen supply. Phosphorescence quenching by oxygen provides a non-invasive optical method to measure oxygen levels within cells and tissues. Difluoroboron β-diketonates are a family of luminophores with high quantum yields and tunable fluorescence and phosphorescence when embedded in certain rigid matrices such as poly (lactic acid) (PLA). Boron nanoparticles (BNPs) can be fabricated from dye-PLA materials for oxygen mapping in a variety of biological milieu. These dual-emissive nanoparticles have oxygen-insensitive fluorescence, oxygen-sensitive phosphorescence, and rigid matrix all in one, enabling real-time ratiometric oxygen sensing at micron-level spatial and millisecond-level temporal resolution. In this study, BNPs are applied in mouse brain slices to investigate oxygen distributions and neuronal activity. The optical properties and physical stability of BNPs in a biologically relevant buffer were stable. Primary neuronal cultures were labeled by BNPs and the mitochondria membrane probe MitoTracker Red FM. BNPs were taken up by neuronal cell bodies, at dendrites, and at synapses, and the localization of BNPs was consistent with that of MitoTracker Red FM. The brain slices were stained with the BNPs, and the BNPs did not significantly affect the electrophysiological properties of neurons. Oxygen maps were generated in living brain slices where oxygen is found to be mostly consumed by mitochondria near synapses. Finally, the BNPs exhibited excellent response when the conditions varied from normoxic to hypoxic and when the neuronal activity was increased by increasing K+ concentration. This work demonstrates the capability of BNPs as a non-invasive tool in oxygen sensing and could provide fundamental insight into neuronal mechanisms and excitability research.
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Affiliation(s)
- Meng Zhuang
- Department of Chemistry, University of Virginia, Charlottesville, VA, 22904, USA
| | - Suchitra Joshi
- Department of Neurology, University of Virginia, Charlottesville, VA, 22903, USA
| | - Huayu Sun
- Department of Neurology, University of Virginia, Charlottesville, VA, 22903, USA
| | - Tamal Batabyal
- Department of Neurology, University of Virginia, Charlottesville, VA, 22903, USA
| | - Cassandra L Fraser
- Department of Chemistry, University of Virginia, Charlottesville, VA, 22904, USA.
| | - Jaideep Kapur
- Department of Neurology, University of Virginia, Charlottesville, VA, 22903, USA.
- Department of Neuroscience, University of Virginia, Charlottesville, VA, 22903, USA.
- UVA Brain Institute, University of Virginia, Charlottesville, VA, 22903, USA.
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6
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Warpsinski G, Smith MJ, Srivastava S, Keeley TP, Siow RCM, Fraser PA, Mann GE. Nrf2-regulated redox signaling in brain endothelial cells adapted to physiological oxygen levels: Consequences for sulforaphane mediated protection against hypoxia-reoxygenation. Redox Biol 2020; 37:101708. [PMID: 32949969 PMCID: PMC7502377 DOI: 10.1016/j.redox.2020.101708] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Revised: 08/21/2020] [Accepted: 08/27/2020] [Indexed: 02/06/2023] Open
Abstract
Ischemic stroke is associated with a surge in reactive oxygen species generation during reperfusion. The narrow therapeutic window for the delivery of intravenous thrombolysis and endovascular thrombectomy limits therapeutic options for patients. Thus, understanding the mechanisms regulating neurovascular redox defenses are key for improved clinical translation. Our previous studies in a rodent model of ischemic stroke established that activation of Nrf2 defense enzymes by pretreatment with sulforaphane (SFN) affords protection against neurovascular and neurological deficits. We here further investigate SFN mediated protection in mouse brain microvascular endothelial cells (bEnd.3) adapted long-term (5 days) to hyperoxic (18 kPa) and normoxic (5 kPa) O2 levels. Using an O2-sensitive phosphorescent nanoparticle probe, we measured an intracellular O2 level of 3.4 ± 0.1 kPa in bEnd 3 cells cultured under 5 kPa O2. Induction of HO-1 and GCLM by SFN (2.5 μM) was significantly attenuated in cells adapted to 5 kPa O2, despite nuclear accumulation of Nrf2. To simulate ischemic stroke, bEnd.3 cells were adapted to 18 or 5 kPa O2 and subjected to hypoxia (1 kPa O2, 1 h) and reoxygenation. In cells adapted to 18 kPa O2, reoxygenation induced free radical generation was abrogated by PEG-SOD and significantly attenuated by pretreatment with SFN (2.5 μM). Silencing Nrf2 transcription abrogated HO-1 and NQO1 induction and led to a significant increase in reoxygenation induced free radical generation. Notably, reoxygenation induced oxidative stress, assayed using the luminescence probe L-012 and fluorescence probes MitoSOX™ Red and FeRhoNox™-1, was diminished in cells cultured under 5 kPa O2, indicating an altered redox phenotype in brain microvascular cells adapted to physiological normoxia. As redox and other intracellular signaling pathways are critically affected by O2, the development of antioxidant therapies targeting the Keap1-Nrf2 defense pathway in treatment of ischemia-reperfusion injury in stroke, coronary and renal disease will require in vitro studies conducted under well-defined O2 levels. Physiological normoxia alters the redox phenotype of murine microvascular brain endothelial cells. Intracellular GSH levels are lower in bEnd.3 cells adapted to 5 kPa versus 18 kPa O2. Nrf2 activated HO-1 and GCLM expression is attenuated under physiological normoxia. Sulforaphane protects against reoxygenation induced reactive oxygen species generation via Nrf2.
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Affiliation(s)
- Gabriela Warpsinski
- King's British Heart Foundation Centre for Research Excellence, School of Cardiovascular Medicine & Sciences, Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London, SE1 9NH, UK
| | - Matthew J Smith
- King's British Heart Foundation Centre for Research Excellence, School of Cardiovascular Medicine & Sciences, Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London, SE1 9NH, UK
| | - Salil Srivastava
- King's British Heart Foundation Centre for Research Excellence, School of Cardiovascular Medicine & Sciences, Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London, SE1 9NH, UK
| | - Thomas P Keeley
- King's British Heart Foundation Centre for Research Excellence, School of Cardiovascular Medicine & Sciences, Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London, SE1 9NH, UK
| | - Richard C M Siow
- King's British Heart Foundation Centre for Research Excellence, School of Cardiovascular Medicine & Sciences, Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London, SE1 9NH, UK
| | - Paul A Fraser
- King's British Heart Foundation Centre for Research Excellence, School of Cardiovascular Medicine & Sciences, Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London, SE1 9NH, UK
| | - Giovanni E Mann
- King's British Heart Foundation Centre for Research Excellence, School of Cardiovascular Medicine & Sciences, Faculty of Life Sciences & Medicine, King's College London, 150 Stamford Street, London, SE1 9NH, UK.
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7
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Kritchenkov IS, Elistratova AA, Sokolov VV, Chelushkin PS, Shirmanova MV, Lukina MM, Dudenkova VV, Shcheslavskiy VI, Kalinina S, Reeß K, Rück A, Tunik SP. A biocompatible phosphorescent Ir(iii) oxygen sensor functionalized with oligo(ethylene glycol) groups: synthesis, photophysics and application in PLIM experiments. NEW J CHEM 2020. [DOI: 10.1039/d0nj01405b] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
NIR emitting Ir(iii) complexes decorated with oligo(ethylene glycol) were used to assess the degree of hypoxia in biosamples.
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Affiliation(s)
- Ilya S. Kritchenkov
- Saint-Petersburg State University
- Institute of Chemistry
- 198504 St. Petersburg
- Russia
| | | | - Viktor V. Sokolov
- Saint-Petersburg State University
- Institute of Chemistry
- 198504 St. Petersburg
- Russia
| | - Pavel S. Chelushkin
- Saint-Petersburg State University
- Institute of Chemistry
- 198504 St. Petersburg
- Russia
| | - Marina V. Shirmanova
- Privolzhskiy Research Medical University
- Institute of Experimental Oncology and Biomedical Technologies
- 603005 Nizhny Novgorod
- Russia
| | - Maria M. Lukina
- Privolzhskiy Research Medical University
- Institute of Experimental Oncology and Biomedical Technologies
- 603005 Nizhny Novgorod
- Russia
| | - Varvara V. Dudenkova
- Privolzhskiy Research Medical University
- Institute of Experimental Oncology and Biomedical Technologies
- 603005 Nizhny Novgorod
- Russia
| | | | - Sviatlana Kalinina
- University Ulm
- Core Facility Confocal and Multiphoton Microscopy
- 89081 Ulm
- Germany
| | - Kirsten Reeß
- University Ulm
- Core Facility Confocal and Multiphoton Microscopy
- 89081 Ulm
- Germany
| | - Angelika Rück
- University Ulm
- Core Facility Confocal and Multiphoton Microscopy
- 89081 Ulm
- Germany
| | - Sergey P. Tunik
- Saint-Petersburg State University
- Institute of Chemistry
- 198504 St. Petersburg
- Russia
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8
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Keeley TP, Mann GE. Defining Physiological Normoxia for Improved Translation of Cell Physiology to Animal Models and Humans. Physiol Rev 2019; 99:161-234. [PMID: 30354965 DOI: 10.1152/physrev.00041.2017] [Citation(s) in RCA: 169] [Impact Index Per Article: 33.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
The extensive oxygen gradient between the air we breathe (Po2 ~21 kPa) and its ultimate distribution within mitochondria (as low as ~0.5-1 kPa) is testament to the efforts expended in limiting its inherent toxicity. It has long been recognized that cell culture undertaken under room air conditions falls short of replicating this protection in vitro. Despite this, difficulty in accurately determining the appropriate O2 levels in which to culture cells, coupled with a lack of the technology to replicate and maintain a physiological O2 environment in vitro, has hindered addressing this issue thus far. In this review, we aim to address the current understanding of tissue Po2 distribution in vivo and summarize the attempts made to replicate these conditions in vitro. The state-of-the-art techniques employed to accurately determine O2 levels, as well as the issues associated with reproducing physiological O2 levels in vitro, are also critically reviewed. We aim to provide the framework for researchers to undertake cell culture under O2 levels relevant to specific tissues and organs. We envisage that this review will facilitate a paradigm shift, enabling translation of findings under physiological conditions in vitro to disease pathology and the design of novel therapeutics.
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Affiliation(s)
- Thomas P Keeley
- King's British Heart Foundation Centre of Research Excellence, School of Cardiovascular Medicine and Sciences, Faculty of Life Sciences and Medicine, King's College London , London , United Kingdom
| | - Giovanni E Mann
- King's British Heart Foundation Centre of Research Excellence, School of Cardiovascular Medicine and Sciences, Faculty of Life Sciences and Medicine, King's College London , London , United Kingdom
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9
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Chelushkin PS, Tunik SP. Phosphorescence Lifetime Imaging (PLIM): State of the Art and Perspectives. SPRINGER SERIES IN CHEMICAL PHYSICS 2019. [DOI: 10.1007/978-3-030-05974-3_6] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
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10
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Kalinina S, Breymayer J, Reeß K, Lilge L, Mandel A, Rück A. Correlation of intracellular oxygen and cell metabolism by simultaneous PLIM of phosphorescent TLD1433 and FLIM of NAD(P)H. JOURNAL OF BIOPHOTONICS 2018; 11:e201800085. [PMID: 29877627 DOI: 10.1002/jbio.201800085] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2018] [Revised: 05/17/2018] [Accepted: 06/05/2018] [Indexed: 05/20/2023]
Abstract
During photodynamic therapy (PDT), disruption of cell respiration and metabolic changes could be one of the first events. Photophysical characteristics of the photosensitizer (PS) and its specific redox potential define consumption of molecular oxygen followed by generation of reactive oxygen species. The potential PS TLD1433 is based on transition metal Ru(II) and possess an oxygen-dependent luminescence. This enables the study of oxygen consumption by PS-phosphorescence lifetime imaging (PLIM) and simultaneously changes the cellular metabolic state by nicotinamide adenine dinucleotide (NAD(P)H)-fluorescence lifetime imaging (FLIM). Within this study, localization and cellular function of TLD1433 is investigated in bladder carcinoma cells using time-resolved and confocal laser scanning microscopy. Simultaneous FLIM/PLIM of NAD(P)H and TLD1433 during PDT correlated oxygen consumption, redox state and cellular energy metabolism. Our investigations aimed to provide a personalized protocol in theranostic PDT procedures and demonstrate the potential use of TLD1433 PDT also under hypoxic conditions, which are otherwise difficult to treat.
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Affiliation(s)
- Sviatlana Kalinina
- Core Facility Confocal and Multiphoton Microscopy, University of Ulm, Ulm, Germany
| | - Jasmin Breymayer
- Core Facility Confocal and Multiphoton Microscopy, University of Ulm, Ulm, Germany
| | - Kirsten Reeß
- Core Facility Confocal and Multiphoton Microscopy, University of Ulm, Ulm, Germany
| | - Lothar Lilge
- Department of Medical Biophysics, Princess Margaret Cancer Institute/University of Toronto, Toronto, ON, Canada
| | | | - Angelika Rück
- Core Facility Confocal and Multiphoton Microscopy, University of Ulm, Ulm, Germany
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11
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Papkovsky DB, Dmitriev RI. Imaging of oxygen and hypoxia in cell and tissue samples. Cell Mol Life Sci 2018; 75:2963-2980. [PMID: 29761206 PMCID: PMC11105559 DOI: 10.1007/s00018-018-2840-x] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2018] [Revised: 04/24/2018] [Accepted: 05/07/2018] [Indexed: 01/17/2023]
Abstract
Molecular oxygen (O2) is a key player in cell mitochondrial function, redox balance and oxidative stress, normal tissue function and many common disease states. Various chemical, physical and biological methods have been proposed for measurement, real-time monitoring and imaging of O2 concentration, state of decreased O2 (hypoxia) and related parameters in cells and tissue. Here, we review the established and emerging optical microscopy techniques allowing to visualize O2 levels in cells and tissue samples, mostly under in vitro and ex vivo, but also under in vivo settings. Particular examples include fluorescent hypoxia stains, fluorescent protein reporter systems, phosphorescent probes and nanosensors of different types. These techniques allow high-resolution mapping of O2 gradients in live or post-mortem tissue, in 2D or 3D, qualitatively or quantitatively. They enable control and monitoring of oxygenation conditions and their correlation with other biomarkers of cell and tissue function. Comparison of these techniques and corresponding imaging setups, their analytical capabilities and typical applications are given.
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Affiliation(s)
- Dmitri B Papkovsky
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland.
| | - Ruslan I Dmitriev
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland.
- Institute for Regenerative Medicine, Sechenov University, Moscow, Russian Federation.
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12
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Okkelman IA, Foley T, Papkovsky DB, Dmitriev RI. Multi-Parametric Imaging of Hypoxia and Cell Cycle in Intestinal Organoid Culture. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2018; 1035:85-103. [PMID: 29080132 DOI: 10.1007/978-3-319-67358-5_6] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Dynamics of oxygenation of tissue and stem cell niches are important for understanding physiological function of the intestine in normal and diseased states. Only a few techniques allow live visualization of tissue hypoxia at cellular level and in three dimensions. We describe an optimized protocol, which uses cell-penetrating O2-sensitive probe, Pt-Glc and phosphorescence lifetime imaging microscopy (PLIM), to analyze O2 distribution in mouse intestinal organoids. Unlike the other indirect and end-point hypoxia stains, or point measurements with microelectrodes, this method provides high-resolution real-time visualization of O2 in organoids. Multiplexing with conventional fluorescent live cell imaging probes such as the Hoechst 33342-based FLIM assay of cell proliferation, and immunofluorescence staining of endogenous proteins, allows analysis of key physiologic parameters under O2 control in organoids. The protocol is useful for gastroenterology and physiology of intestinal tissue, hypoxia research, regenerative medicine, studying host-microbiota interactions and bioenergetics.
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Affiliation(s)
- Irina A Okkelman
- Laboratory of Biophysics and Bioanalysis, School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland
| | - Tara Foley
- Department of Anatomy and Neuroscience, University College Cork, Cork, Ireland
| | - Dmitri B Papkovsky
- Laboratory of Biophysics and Bioanalysis, School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland
| | - Ruslan I Dmitriev
- Metabolic Imaging Group, School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland.
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13
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Mueller BJ, Zhdanov AV, Borisov SM, Foley T, Okkelman IA, Tsytsarev V, Tang Q, Erzurumlu RS, Chen Y, Zhang H, Toncelli C, Klimant I, Papkovsky DB, Dmitriev RI. Nanoparticle-based fluoroionophore for analysis of potassium ion dynamics in 3D tissue models and in vivo. ADVANCED FUNCTIONAL MATERIALS 2018; 28:1704598. [PMID: 30271316 PMCID: PMC6157274 DOI: 10.1002/adfm.201704598] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The imaging of real-time fluxes of K+ ions in live cell with high dynamic range (5-150 mM) is of paramount importance for neuroscience and physiology of the gastrointestinal tract, kidney and other tissues. In particular, the research on high-performance deep-red fluorescent nanoparticle-based biosensors is highly anticipated. We found that BODIPY-based FI3 K+-sensitive fluoroionophore encapsulated in cationic polymer RL100 nanoparticles displays unusually strong efficiency in staining of broad spectrum of cell models, such as primary neurons and intestinal organoids. Using comparison of brightness, photostability and fluorescence lifetime imaging microscopy (FLIM) we confirmed that FI3 nanoparticles display distinctively superior intracellular staining compared to the free dye. We evaluated FI3 nanoparticles in real-time live cell imaging and found that it is highly useful for monitoring intra- and extracellular K+ dynamics in cultured neurons. Proof-of-concept in vivo brain imaging confirmed applicability of the biosensor for visualization of epileptic seizures. Collectively, this data makes fluoroionophore FI3 a versatile cross-platform fluorescent biosensor, broadly compatible with diverse experimental models and that crown ether-based polymer nanoparticles can provide a new venue for design of efficient fluorescent probes.
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Affiliation(s)
- Bernhard J. Mueller
- Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria
| | - Alexander V. Zhdanov
- ABCRF, School of Biochemistry and Cell biology, University College Cork, Cork, Ireland
| | - Sergey M. Borisov
- Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria
| | - Tara Foley
- Department of Anatomy and Neuroscience, University College Cork, Cork, Ireland
| | - Irina A. Okkelman
- ABCRF, School of Biochemistry and Cell biology, University College Cork, Cork, Ireland
| | - Vassiliy Tsytsarev
- Department of Anatomy and Neurobiology, University of Maryland School of Medicine, Baltimore, MD, USA
| | - Qinggong Tang
- Fischell Department of Bioengineering, University of Maryland, College Park, 20740 MD, USA
| | - Reha S. Erzurumlu
- Department of Anatomy and Neurobiology, University of Maryland School of Medicine, Baltimore, MD, USA
| | - Yu Chen
- Fischell Department of Bioengineering, University of Maryland, College Park, 20740 MD, USA
| | - Haijiang Zhang
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Biomimetic Membranes and Textiles, Lerchenfeldstrasse 5, CH-9014 St. Gallen, Switzerland
| | - Claudio Toncelli
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Biomimetic Membranes and Textiles, Lerchenfeldstrasse 5, CH-9014 St. Gallen, Switzerland
| | - Ingo Klimant
- Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria
| | - Dmitri B. Papkovsky
- ABCRF, School of Biochemistry and Cell biology, University College Cork, Cork, Ireland
| | - Ruslan I. Dmitriev
- ABCRF, School of Biochemistry and Cell biology, University College Cork, Cork, Ireland
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14
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Guidelines on experimental methods to assess mitochondrial dysfunction in cellular models of neurodegenerative diseases. Cell Death Differ 2017; 25:542-572. [PMID: 29229998 PMCID: PMC5864235 DOI: 10.1038/s41418-017-0020-4] [Citation(s) in RCA: 104] [Impact Index Per Article: 14.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2017] [Revised: 10/06/2017] [Accepted: 10/12/2017] [Indexed: 01/22/2023] Open
Abstract
Neurodegenerative diseases are a spectrum of chronic, debilitating disorders characterised by the progressive degeneration and death of neurons. Mitochondrial dysfunction has been implicated in most neurodegenerative diseases, but in many instances it is unclear whether such dysfunction is a cause or an effect of the underlying pathology, and whether it represents a viable therapeutic target. It is therefore imperative to utilise and optimise cellular models and experimental techniques appropriate to determine the contribution of mitochondrial dysfunction to neurodegenerative disease phenotypes. In this consensus article, we collate details on and discuss pitfalls of existing experimental approaches to assess mitochondrial function in in vitro cellular models of neurodegenerative diseases, including specific protocols for the measurement of oxygen consumption rate in primary neuron cultures, and single-neuron, time-lapse fluorescence imaging of the mitochondrial membrane potential and mitochondrial NAD(P)H. As part of the Cellular Bioenergetics of Neurodegenerative Diseases (CeBioND) consortium (www.cebiond.org), we are performing cross-disease analyses to identify common and distinct molecular mechanisms involved in mitochondrial bioenergetic dysfunction in cellular models of Alzheimer’s, Parkinson’s, and Huntington’s diseases. Here we provide detailed guidelines and protocols as standardised across the five collaborating laboratories of the CeBioND consortium, with additional contributions from other experts in the field.
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15
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Okkelman IA, Foley T, Papkovsky DB, Dmitriev RI. Live cell imaging of mouse intestinal organoids reveals heterogeneity in their oxygenation. Biomaterials 2017; 146:86-96. [DOI: 10.1016/j.biomaterials.2017.08.043] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Accepted: 08/30/2017] [Indexed: 02/06/2023]
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16
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Oxygen imaging of living cells and tissues using luminescent molecular probes. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS 2017. [DOI: 10.1016/j.jphotochemrev.2017.01.001] [Citation(s) in RCA: 74] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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17
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Zhdanov AV, Okkelman IA, Golubeva AV, Doerr B, Hyland NP, Melgar S, Shanahan F, Cryan JF, Papkovsky DB. Quantitative analysis of mucosal oxygenation using ex vivo imaging of healthy and inflamed mammalian colon tissue. Cell Mol Life Sci 2017; 74:141-151. [PMID: 27510419 PMCID: PMC11107550 DOI: 10.1007/s00018-016-2323-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2016] [Revised: 07/14/2016] [Accepted: 08/02/2016] [Indexed: 12/18/2022]
Abstract
Colonic inflammation is associated with decreased tissue oxygenation, significantly affecting gut homeostasis. However, the crosstalk between O2 consumption and supply in the inflamed tissue are not fully understood. Using a murine model of colitis, we analysed O2 in freshly prepared samples of healthy and inflamed colon tissue. We developed protocols for efficient ex vivo staining of mouse distal colon mucosa with a cell-penetrating O2 sensitive probe Pt-Glc and high-resolution imaging of O2 concentration in live tissue by confocal phosphorescence lifetime-imaging microscopy (PLIM). Microscopy analysis revealed that Pt-Glc stained mostly the top 50-60 μm layer of the mucosa, with high phosphorescence intensity in epithelial cells. Measured O2 values in normal mouse tissue ranged between 5 and 35 μM (4-28 Torr), tending to decrease in the deeper tissue areas. Four-day treatment with dextran sulphate sodium (DSS) triggered colon inflammation, as evidenced by an increase in local IL6 and mKC mRNA levels, but did not affect the gross architecture of colonic epithelium. We further observed an increase in oxygenation, partial activation of hypoxia inducible factor (HIF) 1 signalling, and negative trends in pyruvate dehydrogenase activity and O2 consumption rate in the colitis mucosa, suggesting a decrease in mitochondrial respiration, which is known to be regulated via HIF-1 signalling and pyruvate oxidation rate. These results along with efficient staining with Pt-Glc of rat and human colonic mucosa reveal high potential of PLIM platform as a powerful tool for the high-resolution analysis of the intestinal tissue oxygenation in patients with inflammatory bowel disease and other pathologies, affecting tissue respiration.
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Affiliation(s)
- Alexander V Zhdanov
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland.
| | - Irina A Okkelman
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland
| | - Anna V Golubeva
- APC Microbiome Institute, University College Cork, Cork, Ireland
| | - Barbara Doerr
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland
| | - Niall P Hyland
- APC Microbiome Institute, University College Cork, Cork, Ireland
- Department of Pharmacology and Therapeutics, University College Cork, Cork, Ireland
| | - Silvia Melgar
- APC Microbiome Institute, University College Cork, Cork, Ireland
| | - Fergus Shanahan
- APC Microbiome Institute, University College Cork, Cork, Ireland
| | - John F Cryan
- APC Microbiome Institute, University College Cork, Cork, Ireland
- Department of Anatomy and Neuroscience, University College Cork, Cork, Ireland
| | - Dmitri B Papkovsky
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland
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18
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Alaribe FN, Manoto SL, Motaung SCKM. Scaffolds from biomaterials: advantages and limitations in bone and tissue engineering. Biologia (Bratisl) 2016. [DOI: 10.1515/biolog-2016-0056] [Citation(s) in RCA: 83] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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19
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Papkovsky DB, Zhdanov AV. Phosphorescence based O 2 sensors - Essential tools for monitoring cell and tissue oxygenation and its impact on metabolism. Free Radic Biol Med 2016; 101:202-210. [PMID: 27789291 DOI: 10.1016/j.freeradbiomed.2016.09.018] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/28/2016] [Revised: 09/13/2016] [Accepted: 09/22/2016] [Indexed: 12/27/2022]
Abstract
Oxygenation condition at the cellular level is a critical factor in tissue physiology and common pathophysiological states including cancer, metabolic disorders, ischemia-reperfusion injury and inflammation. O2 and ROS signalling and hypoxia research are rapidly growing areas spanning life and biomedical sciences, but still many current cell and tissue models and experimental set ups lack physiological relevance, particularly precise control of cellular O2. Quenched-phosphorescence O2 sensing enables implementation of such in situ control of cellular O2 and the creation of physiological conditions in respiring samples analysed in vitro. The advantages of optical O2 sensing are the non-invasive, contactless, real-time, quantitative monitoring of O2 concentration, which can be performed in the gas or liquid phase, macroscopically or microscopically, by point measurement or in imaging mode, with sub-cellular spatial resolution, in a flexible manner and with various cell and tissue models. Significantly, this same technology can also be used to probe the metabolism of cells and tissue under specific oxygenation conditions and their responses to changing conditions. Here we describe the range of available O2 sensing systems and tools, their analytical capabilities, uses in cell/tissue physiology and hypoxia research, and strategies for integration in routine experimental procedures.
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Affiliation(s)
- Dmitri B Papkovsky
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland.
| | - Alexander V Zhdanov
- School of Biochemistry and Cell Biology, University College Cork, Cavanagh Pharmacy Building, College Road, Cork, Ireland
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20
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Jenkins J, Borisov SM, Papkovsky DB, Dmitriev RI. Sulforhodamine Nanothermometer for Multiparametric Fluorescence Lifetime Imaging Microscopy. Anal Chem 2016; 88:10566-10572. [PMID: 27696826 DOI: 10.1021/acs.analchem.6b02675] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Live cells function within narrow limits of physiological temperature (T) and O2 and metabolite concentrations. We have designed a cell-permeable T-sensitive fluorescence lifetime-based nanoprobe based on lipophilic sulforhodamine, which stains 2D and 3D cell models, shows cytoplasmic localization, and has a robust response to T (∼0.037 ns/K). Subsequently, we evaluated the probe and fluorescence lifetime imaging microscopy (FLIM) technique for combined imaging of T and O2 gradients in metabolically active cells. We found that in adherent 2D culture of HCT116 cells intracellular T and O2 are close to ambient values. However, in 3D spheroid structures having size >200 μm, T and O2 gradients become pronounced. These microgradients can be enhanced by treatment with mitochondrial uncouplers or dissipated by drug-induced disaggregation of the spheroids. Thus, we demonstrate the existence of local microgradients of T in 3D cell models and utility of combined imaging of O2 and T.
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Affiliation(s)
- James Jenkins
- School of Biochemistry and Cell Biology, University College Cork , Cork, Ireland
| | - Sergey M Borisov
- Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology , 8010 Graz, Austria
| | - Dmitri B Papkovsky
- School of Biochemistry and Cell Biology, University College Cork , Cork, Ireland
| | - Ruslan I Dmitriev
- School of Biochemistry and Cell Biology, University College Cork , Cork, Ireland
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21
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Kalinina S, Breymayer J, Schäfer P, Calzia E, Shcheslavskiy V, Becker W, Rück A. Correlative NAD(P)H-FLIM and oxygen sensing-PLIM for metabolic mapping. JOURNAL OF BIOPHOTONICS 2016; 9:800-811. [PMID: 26990032 DOI: 10.1002/jbio.201500297] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2015] [Revised: 02/02/2016] [Accepted: 02/21/2016] [Indexed: 06/05/2023]
Abstract
Cellular responses to oxygen tension have been studied extensively. Oxygen tension can be determined by considering the phosphorescence lifetime of a phosphorescence sensor. The simultaneous usage of FLIM of coenzymes as NAD(P)H and FAD(+) and PLIM of oxygen sensors could provide information about correlation of metabolic pathways and oxygen tension. We investigated correlative NAD(P)H-FLIM and oxygen sensing-PLIM for simultaneously analyzing cell metabolism and oxygen tension. Cell metabolism and pO2 were observed under different hypoxic conditions in squamous carcinoma cell cultures and in complex ex vivo systems. Increased hypoxia induced an increase of the phosphorescence lifetime of Ru(BPY)3 and in most cases a decrease in the lifetime of NAD(P)H which is in agreement to the expected decrease of the protein-bound NAD(P)H during hypoxia. Oxygen was modulated directly in the mitochondrial membrane. Blocking of complex III and accumulation of oxygen could be observed by both the decrease of the phosphorescence lifetime of Ru(BPY)3 and a reduction of the lifetime of NAD(P)H which was a clear indication of acute changes in the redox state of the cells. For the first time simultaneous FLIM/PLIM has been shown to be able to visualize intracellular oxygen tension together with a change from oxidative to glycolytic phenotype.
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Affiliation(s)
- Sviatlana Kalinina
- Ulm University, Core Facility Confocal and Multiphoton Microscopy, N24, Albert Einstein Allee 11, 89081, Ulm, Germany.
| | - Jasmin Breymayer
- Ulm University, Core Facility Confocal and Multiphoton Microscopy, N24, Albert Einstein Allee 11, 89081, Ulm, Germany
| | - Patrick Schäfer
- Zentrum biomedizinische Forschung (ZBF), Ulm University, Institute of Neurology, Helmholtzstr. 8/1, 89081, Ulm, Germany
| | - Enrico Calzia
- Institut für Anästhesiologische Pathophysiologie und Verfahrensentwicklung, Universitätsklinikum Ulm, Helmholtzstr. 8/1, 89081, Ulm, Germany
| | | | - Wolfgang Becker
- Becker & Hickl GmbH, Nahmitzer Damm 30, 12277, Berlin, Germany
| | - Angelika Rück
- Ulm University, Core Facility Confocal and Multiphoton Microscopy, N24, Albert Einstein Allee 11, 89081, Ulm, Germany.
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22
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Micro- and nanostructured sol-gel-based materials for optical chemical sensing (2005–2015). Mikrochim Acta 2016. [DOI: 10.1007/s00604-016-1863-y] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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23
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Dmitriev RI, O’Donnell N, Papkovsky DB. Metallochelate Coupling of Phosphorescent Pt-Porphyrins to Peptides, Proteins, and Self-Assembling Protein Nanoparticles. Bioconjug Chem 2016; 27:439-45. [DOI: 10.1021/acs.bioconjchem.5b00535] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Ruslan I. Dmitriev
- School of Biochemistry and
Cell Biology, ABCRF, University College Cork, Cork, Ireland
| | - Neil O’Donnell
- School of Biochemistry and
Cell Biology, ABCRF, University College Cork, Cork, Ireland
| | - Dmitri B. Papkovsky
- School of Biochemistry and
Cell Biology, ABCRF, University College Cork, Cork, Ireland
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24
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Liu L, Zhang J, Zhao X, Mao Z, Liu N, Zhang Y, Liu QH. Interaction between charged nanoparticles and vesicles: coarse-grained molecular dynamics simulations. Phys Chem Chem Phys 2016; 18:31946-31957. [DOI: 10.1039/c6cp05998h] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Interactions between charged nanoparticles and curved zwitterionic lipid vesicles with different surface charge densities (ρ): insertion, repulsion, adsorption, and penetration.
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Affiliation(s)
- Linying Liu
- Institute of Electromagnetics and Acoustics
- and Department of Electronic Science
- Xiamen University
- Xiamen
- P. R. China
| | - Jianhua Zhang
- Institute of Electromagnetics and Acoustics
- and Department of Electronic Science
- Xiamen University
- Xiamen
- P. R. China
| | - Xiaowei Zhao
- Institute of Electromagnetics and Acoustics
- and Department of Electronic Science
- Xiamen University
- Xiamen
- P. R. China
| | - Zheng Mao
- Institute of Electromagnetics and Acoustics
- and Department of Electronic Science
- Xiamen University
- Xiamen
- P. R. China
| | - Na Liu
- Institute of Electromagnetics and Acoustics
- and Department of Electronic Science
- Xiamen University
- Xiamen
- P. R. China
| | - Youyu Zhang
- Institute of Electromagnetics and Acoustics
- and Department of Electronic Science
- Xiamen University
- Xiamen
- P. R. China
| | - Qing Huo Liu
- Institute of Electromagnetics and Acoustics
- and Department of Electronic Science
- Xiamen University
- Xiamen
- P. R. China
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25
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Maysinger D, Ji J, Hutter E, Cooper E. Nanoparticle-Based and Bioengineered Probes and Sensors to Detect Physiological and Pathological Biomarkers in Neural Cells. Front Neurosci 2015; 9:480. [PMID: 26733793 PMCID: PMC4683200 DOI: 10.3389/fnins.2015.00480] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2015] [Accepted: 11/30/2015] [Indexed: 01/11/2023] Open
Abstract
Nanotechnology, a rapidly evolving field, provides simple and practical tools to investigate the nervous system in health and disease. Among these tools are nanoparticle-based probes and sensors that detect biochemical and physiological properties of neurons and glia, and generate signals proportionate to physical, chemical, and/or electrical changes in these cells. In this context, quantum dots (QDs), carbon-based structures (C-dots, grapheme, and nanodiamonds) and gold nanoparticles are the most commonly used nanostructures. They can detect and measure enzymatic activities of proteases (metalloproteinases, caspases), ions, metabolites, and other biomolecules under physiological or pathological conditions in neural cells. Here, we provide some examples of nanoparticle-based and genetically engineered probes and sensors that are used to reveal changes in protease activities and calcium ion concentrations. Although significant progress in developing these tools has been made for probing neural cells, several challenges remain. We review many common hurdles in sensor development, while highlighting certain advances. In the end, we propose some future directions and ideas for developing practical tools for neural cell investigations, based on the maxim "Measure what is measurable, and make measurable what is not so" (Galileo Galilei).
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Affiliation(s)
- Dusica Maysinger
- Department of Pharmacology and Therapeutics, McGill University Montreal, QC, Canada
| | - Jeff Ji
- Department of Pharmacology and Therapeutics, McGill University Montreal, QC, Canada
| | - Eliza Hutter
- Department of Pharmacology and Therapeutics, McGill University Montreal, QC, Canada
| | - Elis Cooper
- Department of Physiology, McGill University Montreal, QC, Canada
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26
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Zhdanov AV, Golubeva AV, Okkelman IA, Cryan JF, Papkovsky DB. Imaging of oxygen gradients in giant umbrella cells: an ex vivo PLIM study. Am J Physiol Cell Physiol 2015; 309:C501-9. [DOI: 10.1152/ajpcell.00121.2015] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2015] [Accepted: 08/03/2015] [Indexed: 12/29/2022]
Abstract
O2 plays a pivotal role in aerobic metabolism and regulation of cell and tissue function. Local differences and fluctuations in tissue O2 levels are well documented; however, the physiological significance of O2 microgradients, particularly at the subcellular level, remains poorly understood. Using the cell-penetrating phosphorescent O2 probe Pt-Glc and confocal fluorescence microscopy, we visualized O2 distribution in individual giant (>100-μm) umbrella cells located superficially in the urinary bladder epithelium. We optimized conditions for in vivo phosphorescent staining of the inner surface of the mouse bladder and subsequent ex vivo analysis of excised live tissue. Imaging experiments revealed significant (≤85 μM) and heterogeneous deoxygenation within respiring umbrella cells, with radial O2 gradients of up to 40 μM across the cell, or ∼0.6 μM/μm. Deeply deoxygenated (5–15 μM O2) regions were seen to correspond to the areas enriched with polarized mitochondria. Pharmacological activation of mitochondrial respiration decreased oxygenation and O2 gradients in umbrella cells, while inhibition with antimycin A dissipated the gradients and caused gradual reoxygenation of the tissue to ambient levels. Detailed three-dimensional maps of O2 distribution potentially can be used for the modeling of intracellular O2-dependent enzymatic reactions and downstream processes, such as hypoxia-inducible factor signaling. Further ex vivo and in vivo studies on intracellular and tissue O2 gradients using confocal imaging can shed light on the molecular mechanisms regulating O2-dependent (patho)physiological processes in the bladder and other tissues.
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Affiliation(s)
- A. V. Zhdanov
- School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland
| | - A. V. Golubeva
- Alimentary Pharmabiotic Centre, University College Cork, Cork, Ireland; and
| | - I. A. Okkelman
- School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland
| | - J. F. Cryan
- Alimentary Pharmabiotic Centre, University College Cork, Cork, Ireland; and
- Department of Anatomy and Neuroscience, University College Cork, Cork, Ireland
| | - D. B. Papkovsky
- School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland
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27
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Mouhieddine TH, Itani MM, Nokkari A, Ren C, Daoud G, Zeidan A, Mondello S, Kobeissy FH. Nanotheragnostic applications for ischemic and hemorrhagic strokes: improved delivery for a better prognosis. Curr Neurol Neurosci Rep 2015; 15:505. [PMID: 25394858 DOI: 10.1007/s11910-014-0505-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Stroke is the second leading cause of death worldwide and a major cause of long-term severe disability representing a global health burden and one of the highly researched medical conditions. Nanostructured material synthesis and engineering have been recently developed and have been largely integrated into many fields including medicine. Recent studies have shown that nanoparticles might be a valuable tool in stroke. Different types, shapes, and sizes of nanoparticles have been used for molecular/biomarker profiling and imaging to help in early diagnosis and prevention of stroke and for drug/RNA delivery for improved treatment and neuroprotection. However, these promising applications have limitations, including cytotoxicity, which hindered their adoption into clinical use. Future research is warranted to fully develop and effectively and safely translate nanoparticles for stroke diagnosis and treatment into the clinic. This work will discuss the emerging role of nanotheragnostics in stroke diagnosis and treatment applications.
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Affiliation(s)
- Tarek H Mouhieddine
- Faculty of Medicine, American University of Beirut Medical Center, Beirut, Lebanon,
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28
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Abstract
Luminescence-based sensing schemes for oxygen have experienced a fast growth and are in the process of replacing the Clark electrode in many fields. Unlike electrodes, sensing is not limited to point measurements via fiber optic microsensors, but includes additional features such as planar sensing, imaging, and intracellular assays using nanosized sensor particles. In this essay, I review and discuss the essentials of (i) common solid-state sensor approaches based on the use of luminescent indicator dyes and host polymers; (ii) fiber optic and planar sensing schemes; (iii) nanoparticle-based intracellular sensing; and (iv) common spectroscopies. Optical sensors are also capable of multiple simultaneous sensing (such as O2 and temperature). Sensors for O2 are produced nowadays in large quantities in industry. Fields of application include sensing of O2 in plant and animal physiology, in clinical chemistry, in marine sciences, in the chemical industry and in process biotechnology.
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Affiliation(s)
- Otto S Wolfbeis
- Institute of Analytical Chemistry, Chemo- and Biosensors, University of Regensburg, Regensburg, Germany
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29
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Roussakis E, Li Z, Nichols AJ, Evans CL. Sauerstoffmessung in der Biomedizin - von der Makro- zur Mikroebene. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201410646] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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30
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Roussakis E, Li Z, Nichols AJ, Evans CL. Oxygen-Sensing Methods in Biomedicine from the Macroscale to the Microscale. Angew Chem Int Ed Engl 2015; 54:8340-62. [DOI: 10.1002/anie.201410646] [Citation(s) in RCA: 114] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2014] [Revised: 01/05/2015] [Indexed: 12/15/2022]
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Yoshihara T, Murayama S, Tobita S. Ratiometric Molecular Probes Based on Dual Emission of a Blue Fluorescent Coumarin and a Red Phosphorescent Cationic Iridium(III) Complex for Intracellular Oxygen Sensing. SENSORS 2015; 15:13503-21. [PMID: 26066988 PMCID: PMC4507661 DOI: 10.3390/s150613503] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/27/2015] [Revised: 05/27/2015] [Accepted: 06/04/2015] [Indexed: 01/17/2023]
Abstract
Ratiometric molecular probes RP1 and RP2 consisting of a blue fluorescent coumarin and a red phosphorescent cationic iridium complex connected by a tetra- or octaproline linker, respectively, were designed and synthesized for sensing oxygen levels in living cells. These probes exhibited dual emission with good spectral separation in acetonitrile. The photorelaxation processes, including intramolecular energy transfer, were revealed by emission quantum yield and lifetime measurements. The ratios (RI=(Ip/If)) between the phosphorescence (Ip) and fluorescence (If) intensities showed excellent oxygen responses; the ratio of
RI under degassed and aerated conditions (RI0/RI)
was 20.3 and 19.6 for RP1 and RP2. The introduction of the cationic Ir (III) complex improved the cellular uptake efficiency compared to that of a neutral analogue with a tetraproline linker. The emission spectra of the ratiometric probes internalized into living HeLa or MCF-7 cells could be obtained using a conventional microplate reader. The complex RP2 with an octaproline linker provided ratios comparable to the ratiometric measurements obtained using a microplate reader: the ratio of the
RI
value of RP2 under hypoxia (2.5% O2) to that under normoxia (21% O2) was 1.5 and 1.7 for HeLa and MCF-7 cells, respectively. Thus, the intracellular oxygen levels of MCF-7 cells could be imaged by ratiometric emission measurements using the complex RP2.
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Affiliation(s)
- Toshitada Yoshihara
- Department of Chemistry and Chemical Biology, Graduate School of Science and Technology, Gunma University, 1-5-1 Tenjin-cho, Kiryu, Gunma 376-8515, Japan.
| | - Saori Murayama
- Department of Chemistry and Chemical Biology, Graduate School of Science and Technology, Gunma University, 1-5-1 Tenjin-cho, Kiryu, Gunma 376-8515, Japan.
| | - Seiji Tobita
- Department of Chemistry and Chemical Biology, Graduate School of Science and Technology, Gunma University, 1-5-1 Tenjin-cho, Kiryu, Gunma 376-8515, Japan.
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Dmitriev RI, Borisov SM, Düssmann H, Sun S, Müller BJ, Prehn J, Baklaushev VP, Klimant I, Papkovsky DB. Versatile Conjugated Polymer Nanoparticles for High-Resolution O2 Imaging in Cells and 3D Tissue Models. ACS NANO 2015; 9:5275-88. [PMID: 25858428 DOI: 10.1021/acsnano.5b00771] [Citation(s) in RCA: 90] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
High brightness, chemical and photostability, tunable characteristics, and spectral and surface properties are important attributes for nanoparticle probes designed for live cell imaging. We describe a class of nanoparticles for high-resolution imaging of O2 that consists of a substituted conjugated polymer (polyfluorene or poly(fluorene-alt-benzothiadiazole)) acting as a FRET antenna and a fluorescent reference with covalently bound phosphorescent metalloporphyrin (PtTFPP, PtTPTBPF). The nanoparticles prepared from such copolymers by precipitation method display stability, enhanced (>5-10 times) brightness under one- and two-photon excitation, compatibility with ratiometric and lifetime-based imaging modes, and low toxicity for cells. Their cell-staining properties can be modulated with positively and negatively charged groups grafted to the backbone. The "zwitter-ionic" nanoparticles show high cell-staining efficiency, while their cell entry mechanisms differ for the different 3D models. When injected in the bloodstream, the cationic and anionic nanoparticles show similar distribution in vivo. These features and tunable properties make the conjugated polymer based phosphorescent nanoparticles a versatile tool for quantitative O2 imaging with a broad range of cell and 3D tissue models.
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Affiliation(s)
- Ruslan I Dmitriev
- †School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland
| | - Sergey M Borisov
- ‡Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology, Graz 8010, Austria
| | - Heiko Düssmann
- §Department of Physiology and Medical Physics, Centre for the Study of Neurological Disorders, Royal College of Surgeons in Ireland, Dublin 2, Ireland
| | - Shiwen Sun
- ‡Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology, Graz 8010, Austria
| | - Bernhard J Müller
- ‡Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology, Graz 8010, Austria
| | - Jochen Prehn
- §Department of Physiology and Medical Physics, Centre for the Study of Neurological Disorders, Royal College of Surgeons in Ireland, Dublin 2, Ireland
| | - Vladimir P Baklaushev
- ∥Department of Medicinal Nanobiotechnology, Pirogov Russian State Medical University, Moscow 115682, Russia
- ⊥Federal Research Clinical Centre of Federal Medical and Biological Agency of Russia, Moscow, Russia
| | - Ingo Klimant
- ‡Institute of Analytical Chemistry and Food Chemistry, Graz University of Technology, Graz 8010, Austria
| | - Dmitri B Papkovsky
- †School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland
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Dmitriev RI, Papkovsky DB. Intracellular probes for imaging oxygen concentration: how good are they? Methods Appl Fluoresc 2015; 3:034001. [DOI: 10.1088/2050-6120/3/3/034001] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Jenkins J, Dmitriev RI, Morten K, McDermott KW, Papkovsky DB. Oxygen-sensing scaffolds for 3-dimensional cell and tissue culture. Acta Biomater 2015; 16:126-35. [PMID: 25653216 DOI: 10.1016/j.actbio.2015.01.032] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2014] [Revised: 01/21/2015] [Accepted: 01/22/2015] [Indexed: 10/24/2022]
Abstract
Porous membrane scaffolds are widely used materials for three-dimensional cell cultures and tissue models. Additional functional modification of such scaffolds can significantly extend their use and operational performance. Here we describe hybrid microporous polystyrene-based scaffolds impregnated with a phosphorescent O2-sensitive dye PtTFPP, optimized for live cell fluorescence microscopy and imaging of O2 distribution in cultured cells. Modified scaffolds possess high brightness, convenient spectral characteristics (534 nm excitation, 650 nm emission), stable and robust response to pO2 in phosphorescence intensity and lifetime imaging modes (>twofold response over 21/0% O2), such as confocal PLIM. They are suitable for prolonged use under standard culturing conditions without affecting cell viability, and for multi-parametric imaging analysis of cultured cells and tissue samples. We tested the O2 scaffolds with cultured cancer cells (HCT116), multicellular aggregates (PC12) and rat brain slices and showed that they can inform on tissue oxygenation at different depths and cell densities, changes in respiration activity, viability and responses to drug treatment. Using this method multiplexed with staining of dead cells (CellTox Green) and active mitochondria (TMRM), we demonstrated that decreased O2 (20-24 μM) in scaffold corresponds to highest expression of tyrosine hydroxylase in PC12 cells. Such hypoxia is also beneficial for action of hypoxia-specific anti-cancer drug tirapazamine (TPZ). Thus, O2 scaffolds allow for better control of conditions in 3D tissue cultures, and are useful for a broad range of biomaterials and physiological studies.
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Time-Resolved Emission Imaging Microscopy Using Phosphorescent Metal Complexes: Taking FLIM and PLIM to New Lengths. LUMINESCENT AND PHOTOACTIVE TRANSITION METAL COMPLEXES AS BIOMOLECULAR PROBES AND CELLULAR REAGENTS 2014. [DOI: 10.1007/430_2014_168] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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