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Danilkina NA, Andrievskaya EV, Vasileva AV, Lyapunova AG, Rumyantsev AM, Kuzmin AA, Bessonova EA, Balova IA. 4-Azidocinnoline-Cinnoline-4-amine Pair as a New Fluorogenic and Fluorochromic Environment-Sensitive Probe. Molecules 2021; 26:7460. [PMID: 34946541 PMCID: PMC8704291 DOI: 10.3390/molecules26247460] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2021] [Revised: 12/01/2021] [Accepted: 12/06/2021] [Indexed: 12/03/2022] Open
Abstract
A new type of fluorogenic and fluorochromic probe based on the reduction of weakly fluorescent 4-azido-6-(4-cyanophenyl)cinnoline to the corresponding fluorescent cinnoline-4-amine was developed. We found that the fluorescence of 6-(4-cyanophenyl)cinnoline-4-amine is strongly affected by the nature of the solvent. The fluorogenic effect for the amine was detected in polar solvents with the strongest fluorescence increase in water. The environment-sensitive fluorogenic properties of cinnoline-4-amine in water were explained as a combination of two types of fluorescence mechanisms: aggregation-induced emission (AIE) and excited state intermolecular proton transfer (ESPT). The suitability of an azide-amine pair as a fluorogenic probe was tested using a HepG2 hepatic cancer cell line with detection by fluorescent microscopy, flow cytometry, and HPLC analysis of cells lysates. The results obtained confirm the possibility of the transformation of the azide to amine in cells and the potential applicability of the discovered fluorogenic and fluorochromic probe for different analytical and biological applications in aqueous medium.
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Affiliation(s)
- Natalia A. Danilkina
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia; (N.A.D.); (A.V.V.); (A.G.L.); (E.A.B.)
| | | | - Anna V. Vasileva
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia; (N.A.D.); (A.V.V.); (A.G.L.); (E.A.B.)
| | - Anna G. Lyapunova
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia; (N.A.D.); (A.V.V.); (A.G.L.); (E.A.B.)
| | - Andrey M. Rumyantsev
- Department of Genetics and Biotechnology, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia;
| | - Andrey A. Kuzmin
- Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Tikhoretsky Avenue 4, 194064 Saint Petersburg, Russia;
| | - Elena A. Bessonova
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia; (N.A.D.); (A.V.V.); (A.G.L.); (E.A.B.)
| | - Irina A. Balova
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia; (N.A.D.); (A.V.V.); (A.G.L.); (E.A.B.)
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2
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Kurzydłowski D, Chumak T, Rogoża J, Listkowski A. Hydrogen-Bonded Cyclic Dimers at Large Compression: The Case of 1 H-pyrrolo[3,2- h]quinoline and 2-(2'-pyridyl)pyrrole. Molecules 2021; 26:molecules26133802. [PMID: 34206494 PMCID: PMC8270273 DOI: 10.3390/molecules26133802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Revised: 06/18/2021] [Accepted: 06/19/2021] [Indexed: 11/17/2022] Open
Abstract
1H-pyrrolo[3,2-h]qinoline (PQ) and 2-(2′-pyridyl)pyrrole (PP) are important systems in the study of proton-transfer reactions. These molecules possess hydrogen bond donor (pyrrole) and acceptor (pyridine) groups, which leads to the formation of cyclic dimers in their crystals. Herein, we present a joint experimental (Raman scattering) and computational (DFT modelling) study on the high-pressure behaviour of PQ and PP molecular crystals. Our results indicate that compression up to 10 GPa (100 kbar) leads to considerable strengthening of the intermolecular hydrogen bond within the cyclic dimers. However, the intramolecular N–H∙∙∙N interaction is either weakly affected by pressure, as witnessed in PQ, or weakened due to compression-induced distortions of the molecule, as was found for PP. Therefore, we propose that the compression of these systems should facilitate double proton transfer within the cyclic dimers of PQ and PP, while intramolecular transfer should either remain unaffected (for PQ) or weakened (for PP).
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Affiliation(s)
- Dominik Kurzydłowski
- Faculty of Mathematics and Natural Sciences, Cardinal Stefan Wyszyński University, 01-038 Warsaw, Poland; (T.C.); (A.L.)
- Correspondence:
| | - Taisiia Chumak
- Faculty of Mathematics and Natural Sciences, Cardinal Stefan Wyszyński University, 01-038 Warsaw, Poland; (T.C.); (A.L.)
| | - Jakub Rogoża
- Faculty of Physics, University of Warsaw, 02-093 Warsaw, Poland;
| | - Arkadiusz Listkowski
- Faculty of Mathematics and Natural Sciences, Cardinal Stefan Wyszyński University, 01-038 Warsaw, Poland; (T.C.); (A.L.)
- Institute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland
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3
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Li J, Feng S, Feng X, Yang D. Revelation of
ESIPT
mechanism for the novel fluorescent system
HNIBT
in toluene and methanol solvents: A
TDDFT
study. J CHIN CHEM SOC-TAIP 2021. [DOI: 10.1002/jccs.202000244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Junyu Li
- College of Physics and Electronic Engineering Zhengzhou University of Light Industry Zhengzhou P. R. China
| | - Shiquan Feng
- College of Physics and Electronic Engineering Zhengzhou University of Light Industry Zhengzhou P. R. China
| | - Xuechao Feng
- College of Physics and Electronic Engineering Zhengzhou University of Light Industry Zhengzhou P. R. China
| | - Dapeng Yang
- School of Physics and Electronics North China University of Water Resources and Electric Power Zhengzhou P. R. China
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4
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Du C, Zhou Q, Zhang M, Song P, Ma F. Excited-state intramolecular proton transfer of 6-amino-2-(2′-hydroxyphenyl) benzoxazole (6A-HBO) in different solvents. J PHYS ORG CHEM 2018. [DOI: 10.1002/poc.3901] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Can Du
- Department of Physics; Liaoning University; Shenyang China
| | - Qiao Zhou
- Department of Physics; Liaoning University; Shenyang China
| | - Meixia Zhang
- Department of Physics; Liaoning University; Shenyang China
| | - Peng Song
- Department of Physics; Liaoning University; Shenyang China
- Liaoning Key Laboratory of Semiconductor Light Emitting and Photocatalytic Materials; Liaoning University; Shenyang China
| | - Fengcai Ma
- Department of Physics; Liaoning University; Shenyang China
- Liaoning Key Laboratory of Semiconductor Light Emitting and Photocatalytic Materials; Liaoning University; Shenyang China
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5
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The effect of protic solvents on the excited state proton transfer of 3-hydroxyflavone: A TD-DFT static and molecular dynamics study. J Mol Liq 2018. [DOI: 10.1016/j.molliq.2017.12.148] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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6
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Paul S, Karar M, Das B, Mallick A, Majumdar T. Theory after experiment on sensing mechanism of a newly developed sensor molecule: Converging or diverging? Chem Phys Lett 2017. [DOI: 10.1016/j.cplett.2017.10.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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7
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Pijeau S, Hohenstein EG. Improved Complete Active Space Configuration Interaction Energies with a Simple Correction from Density Functional Theory. J Chem Theory Comput 2017; 13:1130-1146. [DOI: 10.1021/acs.jctc.6b00893] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Shiela Pijeau
- Department
of Chemistry and Biochemistry, The City College of New York, New York, New York 10031, United States
| | - Edward G. Hohenstein
- Department
of Chemistry and Biochemistry, The City College of New York, New York, New York 10031, United States
- Ph.D.
Program in Chemistry, The City University of New York, New York, New York 10016, United States
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8
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Zilberg S, Dick B. Less stable tautomers form stronger hydrogen bonds: the case of water complexes. Phys Chem Chem Phys 2017; 19:25086-25094. [PMID: 28880041 DOI: 10.1039/c7cp04105e] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Hydrogen bonding in cyclic complexes of water with tautomeric pairs of molecules M0 and M1 is calculated to be stronger by more than 25% for the less stable tautomer M1 in all cases where the energy gap between the two tautomers is large (ΔE(M0 − M1) > 10 kcal mol−1).
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Affiliation(s)
- Shmuel Zilberg
- Chemical Sciences Department
- Ariel University
- Ariel 40700
- Israel
| | - Bernhard Dick
- Institute of Physical and Theoretical Chemistry
- University of Regensburg
- 93040 Regensburg
- Germany
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9
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Li C, Yang Y, Ma C, Liu Y. Effect of amino group on the excited-state intramolecular proton transfer (ESIPT) mechanisms of 2-(2′-hydroxyphenyl)benzoxazole and its amino derivatives. RSC Adv 2016. [DOI: 10.1039/c5ra23261a] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The electronic density redistributes and it migrates in opposite directions for HBO when compared to those of 5A-HBO and 6A-HBO. The amino group in the HBO framework can change the behavior of the intramolecular hydrogen bonds.
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Affiliation(s)
- Chaozheng Li
- College of Physics and Electronic Engineer
- Henan Normal University
- Xinxiang 453007
- China
| | - Yonggang Yang
- College of Physics and Electronic Engineer
- Henan Normal University
- Xinxiang 453007
- China
| | - Chi Ma
- College of Physics and Electronic Engineer
- Henan Normal University
- Xinxiang 453007
- China
| | - Yufang Liu
- College of Physics and Electronic Engineer
- Henan Normal University
- Xinxiang 453007
- China
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10
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Li H, Shi Y, Yin H, Wang Y, Cong L, Jin M, Ding D. New insights into the solvent-assisted excited-state double proton transfer of 2-(1H-pyrazol-5-yl)pyridine with alcoholic partners: a TDDFT investigation. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 141:211-215. [PMID: 25679182 DOI: 10.1016/j.saa.2015.01.060] [Citation(s) in RCA: 65] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2014] [Revised: 11/05/2014] [Accepted: 01/25/2015] [Indexed: 06/04/2023]
Abstract
Excited-state double proton transfer (ESDPT) in the hydrogen-bonded 2-(1H-pyrazol-5-yl)pyridine with propyl alcoholic partner (PPP) was theoretically investigated by time-dependent density functional theory (TDDFT) method. Great changes have taken place for the calculated geometric structures, the electron density features and vibrational spectrum of PPP system in S0 and S1 state. Our results have demonstrated that ESDPT reaction happens within the system upon photoexcitation. We also found that the ESDPT process is facilitated by the electronically excited state intermolecular hydrogen bond strengthening. Particularly, after the photoexcitation from HOMO(π) to the LUMO(π(∗)), the rearrangement of electronic density distribution of frontier molecular orbitals (MOs) on pyridine and the pyrazol moieties exhibits a very important positive factor for the ESDPT. Furthermore, by the investigation of the stretching vibrations of NH and OH groups, the infrared (IR) spectroscopic results provide us not only a theoretical evidence of ESDPT, but also a considerable clue to characterize the nature of intermolecular reaction. In addition, efforts have also been devoted towards calculating the absorption peak, which shows good consistency with the experimental result of the studied system.
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Affiliation(s)
- Hui Li
- Institute of Atomic and Molecular Physics, Jilin Provincial Key Laboratory of Applied Atomic and Molecular Spectroscopy, Jilin University, Changchun 130012, China
| | - Ying Shi
- Institute of Atomic and Molecular Physics, Jilin Provincial Key Laboratory of Applied Atomic and Molecular Spectroscopy, Jilin University, Changchun 130012, China.
| | - Hang Yin
- Institute of Atomic and Molecular Physics, Jilin Provincial Key Laboratory of Applied Atomic and Molecular Spectroscopy, Jilin University, Changchun 130012, China
| | - Ye Wang
- Institute of Atomic and Molecular Physics, Jilin Provincial Key Laboratory of Applied Atomic and Molecular Spectroscopy, Jilin University, Changchun 130012, China
| | - Lin Cong
- Institute of Atomic and Molecular Physics, Jilin Provincial Key Laboratory of Applied Atomic and Molecular Spectroscopy, Jilin University, Changchun 130012, China
| | - Mingxing Jin
- Institute of Atomic and Molecular Physics, Jilin Provincial Key Laboratory of Applied Atomic and Molecular Spectroscopy, Jilin University, Changchun 130012, China
| | - Dajun Ding
- Institute of Atomic and Molecular Physics, Jilin Provincial Key Laboratory of Applied Atomic and Molecular Spectroscopy, Jilin University, Changchun 130012, China
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11
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Kungwan N, Kerdpol K, Daengngern R, Hannongbua S, Barbatti M. Effects of the second hydration shell on excited-state multiple proton transfer: dynamics simulations of 7-azaindole:(H2O)1–5 clusters in the gas phase. Theor Chem Acc 2014. [DOI: 10.1007/s00214-014-1480-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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12
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Pietrzak M, Dobkowski J, Gorski A, Gawinkowski S, Kijak M, Luboradzki R, Hansen PE, Waluk J. Arresting consecutive steps of a photochromic reaction: studies of β-thioxoketones combining laser photolysis with NMR detection. Phys Chem Chem Phys 2014; 16:9128-37. [DOI: 10.1039/c4cp00530a] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Laser photolysis coupled with NMR detection was used for the identification of photoproducts and the photoreaction pathway of monothiodibenzoylmethane.
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Affiliation(s)
- Mariusz Pietrzak
- Institute of Physical Chemistry
- Polish Academy of Sciences
- 01-224 Warsaw, Poland
| | - Jacek Dobkowski
- Institute of Physical Chemistry
- Polish Academy of Sciences
- 01-224 Warsaw, Poland
| | - Alexandr Gorski
- Institute of Physical Chemistry
- Polish Academy of Sciences
- 01-224 Warsaw, Poland
| | | | - Michał Kijak
- Institute of Physical Chemistry
- Polish Academy of Sciences
- 01-224 Warsaw, Poland
| | - Roman Luboradzki
- Institute of Physical Chemistry
- Polish Academy of Sciences
- 01-224 Warsaw, Poland
| | - Poul Erik Hansen
- Department of Science
- Systems and Models
- Roskilde University
- DK-4000 Roskilde, Denmark
| | - Jacek Waluk
- Institute of Physical Chemistry
- Polish Academy of Sciences
- 01-224 Warsaw, Poland
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