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Boukar O, Fifen JJ, Conradie J, Conradie MM. Solvation energies of the ferrous ion in water and in ammonia at various temperatures. J Mol Model 2024; 30:52. [PMID: 38285315 DOI: 10.1007/s00894-024-05839-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Accepted: 01/09/2024] [Indexed: 01/30/2024]
Abstract
CONTEXT The solvation of metal ions is crucial to understanding relevant properties in physics, chemistry, or biology. Therefore, we present solvation enthalpies and solvation free energies of the ferrous ion in water and ammonia. Our results agree well with the experimental reports for the hydration free energy and hydration enthalpy. We obtained [Formula: see text] kJ mol[Formula: see text] for the hydration free energy and [Formula: see text] kJ mol[Formula: see text] for the hydration enthalpy of ferrous ion in water at room temperature. At ambient temperature, we obtained [Formula: see text] kJ mol[Formula: see text] as the [Formula: see text] ammoniation free energy and [Formula: see text] kJ mol[Formula: see text] for the ammoniation enthalpy. In addition, the free energy of solvation is deeply affected when the temperature increases. This pattern can be attributed to the rise of entropy when the temperature rises. Besides, the temperature does not affect the ammoniation enthalpies and the hydration enthalpy of the [Formula: see text] ion. METHOD All the geometry optimizations are performed at the MP2 methods associated with the 6-31++g(d,p) basis set of Pople. solvated phase structures of [Formula: see text] ion in water or in ammonia are performed using the PCM model. The [Formula: see text] program suite was used to perform all the calculations. The program TEMPO was also used to evaluate the temperature sensitivity of the different obtained geometries.
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Affiliation(s)
- Ousman Boukar
- Department of Physics, Faculty of Science, University of Maroua, P.O. Box 46, Maroua, Cameroon.
| | - Jean Jules Fifen
- Quantum Theory and Aplications Unit, Department of Physics, Faculty of Science, The University of Ngaoundere, P.O. Box 454, Ngaoundere, Cameroon.
| | - Jeanet Conradie
- Department of Chemistry, University of the Free State, PO Box 339, Bloemfontein, 9300, South Africa
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2
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Zhang Y, Wang S, Zhang Z, Fu L, Ning H, Zhao HY. Exploring the reaction kinetics of methyl formate + NO 2: implication for ignition behavior of methyl formate/NO 2 mixtures. Phys Chem Chem Phys 2023; 25:32051-32061. [PMID: 37982198 DOI: 10.1039/d3cp04444k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2023]
Abstract
The reaction pathways and potential energy profiles are theoretically explored for H-abstraction, addition and addition-dissociation reactions of methyl formate (MF, HC(O)OCH3) + NO2 using the high level quantum chemical compound method CCSD(T)/cc-pVxZ(x = T, Q)//M062X/6-311+G(2df,2p). Notably, three different HNO2 isomers (cis-HONO, trans-HONO and HNO2) are all considered in each reaction pathway. The corresponding temperature- and pressure-dependent rate constants are then computed by RRKM/ME simulations with one-dimensional hindered rotor approximation and asymmetric Eckart tunneling corrections. The calculations show that the rate constants are pressure independent. Although trans-HONO is the most stable HNO2 isomer, the results reveal that the dominant channels are cis-HONO + HC(O)OCH2/C(O)OCH3 and cis-HC(O)(ONO)OCH3 for the H-abstraction and addition, respectively. Moreover, the lowest energy barrier for the H-abstraction channel (cis-abs) is 11.2 kcal mol-1 lower than the addition channel (cis-add), and thus the addition channel is less kinetically favored. The computed rate constants for the MF + NO2 reaction are then incorporated into a kinetic model and the importance of the title reaction in predicting the ignition behavior of MF/NO2 mixtures is demonstrated by kinetic modeling. The detailed reaction kinetics in this work will be helpful for kinetic model development of other ester-based fuels.
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Affiliation(s)
- Yiran Zhang
- School of Physical Science and Technology, Southwest Jiaotong University, Chengdu 610031, PR China
| | - Sihao Wang
- Key Laboratory of Advanced Technologies of Materials, Ministry of Education, Southwest Jiaotong University, Chengdu 610031, P. R. China.
| | - Zhenpeng Zhang
- Key Laboratory of Advanced Technologies of Materials, Ministry of Education, Southwest Jiaotong University, Chengdu 610031, P. R. China.
| | - Li Fu
- School of Physical Science and Technology, Southwest Jiaotong University, Chengdu 610031, PR China
| | - Hongbo Ning
- Key Laboratory of Advanced Technologies of Materials, Ministry of Education, Southwest Jiaotong University, Chengdu 610031, P. R. China.
| | - H Y Zhao
- Xiling DigitIntel Institute, Chengdu 610000, P. R. China
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Patla A, Subramanian R. Thermodynamic and optical properties of HCOOH(H 2O) n and HCOOH(NH 3)(H 2O) (n-1) clusters at various temperatures and pressures: a computational study. Phys Chem Chem Phys 2023; 25:7869-7880. [PMID: 36857704 DOI: 10.1039/d2cp03908g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/12/2023]
Abstract
Density functional theory has been used to compute the gas-phase geometries, binding energies, ZPE-corrected binding energies, BSSE-corrected binding energies, binding enthalpies, and binding free energies of HCOOH(H2O)n and HCOOH(NH3)(H2O)(n-1) clusters with n = 1-8, 10, 12, 14, 16, 18, and 20. Enthalpies and free energies are calculated for a range of atmospherically relevant temperatures (T) and pressures (P) (from T = 298.15 K, P = 1013.25 hPa to T = 216.65 K, P = 226.32 hPa). The optical properties of those clusters have been studied at the CAM-B3LYP/aug-cc-pVDZ level of theory.
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Affiliation(s)
- Arnab Patla
- Department of Chemistry, Indian Institute of Technology Patna, 801103, India.
| | - Ranga Subramanian
- Department of Chemistry, Indian Institute of Technology Patna, 801103, India.
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Su Y, Ren Q, Zhang WY, Chen F. Computational Studies on the Reactivity of Polycyclic Aromatic Hydrocarbons. Chemphyschem 2023; 24:e202200638. [PMID: 36409286 DOI: 10.1002/cphc.202200638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Revised: 11/15/2022] [Accepted: 11/18/2022] [Indexed: 11/23/2022]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are widely present in the environment as toxic pollutants. In this study, quantum chemistry methods are used to study reactions of PAHs in both particle and gas phases. Seven theoretical methods are exploited to predict the reactive sites of 15 PAHs in the particle phase. Among these methods, the performance of the condensed Fukui function (CFF) is optimum. The gas-phase reactions of eight PAHs are also investigated. Except for fluorene, CFF predicts correctly the gas-phase mono-nitro products for seven systems. The products of fluorene predicted by CFF are 1-nitrofluorene and 3-nitrofluorene, which is however inconsistent with the experimental results. Transition state theory is then used to investigate the reaction mechanism of fluorene. Calculated rate constants for 3-nitrofluorene and 2-nitrofluorene formation are much bigger than that for 1-nitrofluorene formation, which is in agreement with the experimental results.
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Affiliation(s)
- Yingwei Su
- Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Beijing, 100083, China
| | - Qing Ren
- Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Beijing, 100083, China
| | - Wen-Yan Zhang
- Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Beijing, 100083, China
| | - Feiwu Chen
- Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Beijing, 100083, China
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Lu QH, Lu J, Li XJ. Structural evolution and electronic properties of neutral and anionic TiASi l (A = Sc, Ti; l ≤ 12): relatively stable TiASi 4 as a structural unit. Phys Chem Chem Phys 2023; 25:529-539. [DOI: 10.1039/d2cp04925b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Molecular orbitals (MO) and the HOMO–LUMO energy gaps (HLgs) of neutral TiASi4 clusters (A = Sc, Ti).
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Affiliation(s)
- Qing-Hua Lu
- School of Life Science and Technology, Inner Mongolia University of Science and Technology, Baotou 014010, P. R. China
- Inner Mongolia Key Laboratory for Biomass-Energy Conversion, Baotou 014010, P. R. China
| | - Jun Lu
- School of Life Science and Technology, Inner Mongolia University of Science and Technology, Baotou 014010, P. R. China
- Inner Mongolia Key Laboratory for Biomass-Energy Conversion, Baotou 014010, P. R. China
| | - Xiao-Jun Li
- School of Science, Xi’an University of Posts and Telecommunications, Xi’an 710121, Shaanxi, P. R. China
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Zhang J, Feng LC, Li SZ, Dong WK. Studies on two phenoxo-bridged homopolynuclear Cu(II) bis(salamo) type complexes based on theoretical calculations and fluorescence properties. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.116113] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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Muz İ, Kurban M. Zinc oxide nanoclusters and their potential application as CH 4 and CO 2 gas sensors: Insight from DFT and TD-DFT. J Comput Chem 2022; 43:1839-1847. [PMID: 36054565 DOI: 10.1002/jcc.26986] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 06/10/2022] [Accepted: 08/03/2022] [Indexed: 12/12/2022]
Abstract
We have investigated the adsorption of CH4 and CO2 gases on zinc oxide nanoclusters (ZnO NCs) using density functional theory (DFT). It was found that the CH4 tends to be physically adsorbed on the surface of all the ZnO NCs with adsorption energy in the range -11 to -14 kcal/mol. Even though, the CO2 is favorably chemisorbed on the Zn12 O12 and Zn15 O15 NCs, with adsorption energy about -38 kcal/mol at B3LYP/6-311G(d,p) level of theory. When the CH4 and CO2 gases are adsorbed on the ZnO NCs, their electrical conductivities are decreased, and thus the studied ZnO NCs do not generate an electrical signal in the presence of CH4 and CO2 gases. Interestingly, both pure and gas adsorbed Zn22 O22 NC exhibited more favorable electronic and reactive properties than other NCs. Comparison of the structural, electronic, and optical data predicted by DFT/B3LYP and TD-DFT/CAM-B3LYP calculations with those experimentally obtained show good agreement.
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Affiliation(s)
- İskender Muz
- Department of Mathematics and Science Education, Nevşehir Hacı Bektaş Veli University, Nevşehir, Turkey
| | - Mustafa Kurban
- Department of Electrical and Electronics Engineering, Kırşehir Ahi Evran University, Kırşehir, Turkey
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Haiwang Djefoulna VH, Abia D, Jules Fifen J, Nsangou M, Jaidane NE. Rotational thermodynamic parameters for asymmetric-top molecules: classical vs. quantum approaches and new analytical partition function. Mol Phys 2022. [DOI: 10.1080/00268976.2022.2087565] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
| | - Daouda Abia
- Department of Chemistry, Faculty of Science, The University of Ngaoundere, Ngaoundere, Cameroon
| | - Jean Jules Fifen
- Quantum Theory and Aplications Unit, Department of Physics, Faculty of Science, The University of Ngaoundere, Ngaoundere, Cameroon
| | - Mama Nsangou
- Quantum Theory and Aplications Unit, Department of Physics, Faculty of Science, The University of Ngaoundere, Ngaoundere, Cameroon
- University of Maroua, Maroua, Cameroon
| | - Nejm-Eddine Jaidane
- Laboratoire de Spectroscopie Atomique Moléculaire et Applications, Faculté des Sciences de Tunis, Université de Tunis El Manar, Tunis, Tunisie
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Zhang K, Cai L, Fan J, Song Y, Lin L, Wang CK. Efficient deep red/near-infrared thermally activated delayed fluorescence emitters via molecular reconstruction: theoretical insights. Phys Chem Chem Phys 2022; 24:26764-26775. [DOI: 10.1039/d2cp03697e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Molecular bonding and molecular fusion can achieve an effective red-shift of intrinsic emission and efficient DR and NIR emission.
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Affiliation(s)
- Kai Zhang
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, 250014 Jinan, China
| | - Lei Cai
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, 250014 Jinan, China
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, Suzhou, Jiangsu 215123, China
| | - Jianzhong Fan
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, 250014 Jinan, China
| | - Yuzhi Song
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, 250014 Jinan, China
| | - Lili Lin
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, 250014 Jinan, China
| | - Chuan-Kui Wang
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, 250014 Jinan, China
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Lu J, Lu QH, Li XJ. Quantum chemistry calculations of the growth patterns, simulated photoelectron spectra, and electronic properties of LaASi l (A = Sc, Y, La; l ≤ 10) compounds and their anions. Phys Chem Chem Phys 2021; 23:25679-25688. [PMID: 34755155 DOI: 10.1039/d1cp03767f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The growth patterns, simulated photoelectron spectra, and electronic properties of LaASil (A = Sc, Y, and La; l ≤ 10) compounds and their anions were studied via quantum chemistry calculations using the Perdew-Burke-Ernzerhof (PBE) method and unprejudiced structural searching software ABCluster. The results revealed that the growth patterns of the most stable structures of neutral and anionic LaASil showed an adsorptive mode. The lowest-energy structures (LESs) of the LaASil (l ≤ 7) clusters were similar, except for those of anionic LaYSi4- and LaYSi5- and neutral LaScSi7. Additionally, we investigated and calculated the photoelectron spectra, vertical detachment energies, adiabatic electron affinities, relative stability, charge transfer, magnetic moment, and chemical bond analysis of the LaASil ground-state structures. The La2Sil clusters exhibited higher stability than the LaYSil and LaScSil systems owing to their higher dissociation energies (DEs). The DEs of the LESs in the LaASi3 molecule are higher than those of other clusters. Thus, the LaASi3 cluster shows potential as a building framework for Si-based cluster materials with good stability. The natural population analysis data and chemical bond analysis results showed that the spd hybridization of the orbitals of the metal atoms in the LaASil system occurred. Except for the LaScSi9 and LaScSi10 clusters, the neutral LaASil compounds transform into the corresponding anions when an extra electron is accepted by the Si clusters.
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Affiliation(s)
- Jun Lu
- School of Life Science and Technology, Inner Mongolia University of Science and Technology, Baotou 014010, P. R. China.
| | - Qing-Hua Lu
- School of Life Science and Technology, Inner Mongolia University of Science and Technology, Baotou 014010, P. R. China.
| | - Xiao-Jun Li
- School of Science, Xi'an University of Posts and Telecommunications, Xi'an 710121, Shaanxi, P. R. China
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Mohammadi MD, Abdullah HY, Biskos G, Bhowmick S. Effect of Al- and Ga-doping on the adsorption of H 2 SiCl 2 onto the outer surface of boron nitride nanotube: a DFT study. CR CHIM 2021. [DOI: 10.5802/crchim.87] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Gogoi G, Bhattacharya L, Sahoo SR, Sahu S, Sarma NS, Sharma S. Enhancement of air-stability, π-stacking ability, and charge transport properties of fluoroalkyl side chain engineered n-type naphthalene tetracarboxylic diimide compounds. RSC Adv 2021; 11:57-70. [PMID: 35423045 PMCID: PMC8690421 DOI: 10.1039/d0ra08345c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Accepted: 11/26/2020] [Indexed: 11/21/2022] Open
Abstract
In this study, the impact of fluoroalkyl side chain substitution on the air-stability, π-stacking ability, and charge transport properties of the versatile acceptor moiety naphthalene tetracarboxylic diimide (NDI) has been explored. A density functional theory (DFT) study has been carried out for a series of 24 compounds having different side chains (alkyl, fluoroalkyl) through the imide nitrogen position of NDI moiety. The fluoroalkyl side chain engineered NDI compounds have much deeper highest occupied molecular orbitals (HOMO) and lowest unoccupied molecular orbitals (LUMO) than those of their alkyl substituted compounds due to the electron withdrawing nature of fluoroalkyl groups. The higher electron affinity (EA > 2.8 eV) and low-lying LUMO levels (<−4.00 eV) for fluoroalkyl substituted NDIs reveal that they may exhibit better air-stability with superior n-type character. The computed optical absorption spectra (∼386 nm) for all the investigated NDIs using time-dependent DFT (TD-DFT) lie in the ultra-violet (UV) region of the solar spectrum. In addition, the low value of the LOLIPOP (Localized Orbital Locator Integrated Pi Over Plane) index for fluoroalkyl side chain comprising NDI compounds indicates better π–π stacking ability. This is also in good agreement for the predicted π–π stacking interaction obtained from a molecular electrostatic potential energy surface (ESP) study. The π–π stacking is thought to be of cofacial interaction for the fluoroalkyl substituted compounds and herringbone interaction for the alkyl substituted compounds. The calculated results shed light on why side chain engineering with fluoroalkyl groups can effectively lead to better air-stability, π-stacking ability and improved charge transport properties. In this study, the impact of fluoroalkyl side chain substitution on the air-stability, π-stacking ability, and charge transport properties of the versatile acceptor moiety naphthalene tetracarboxylic diimide (NDI) has been explored.![]()
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Affiliation(s)
- Gautomi Gogoi
- Advanced Materials Laboratory
- Physical Sciences Division
- Institute of Advanced Study in Science and Technology
- Guwahati-781035
- India
| | - Labanya Bhattacharya
- High Performance Computing Lab
- Department of Physics
- Indian Institute of Technology (Indian School of Mines)
- Dhanbad
- India
| | - Smruti R. Sahoo
- High Performance Computing Lab
- Department of Physics
- Indian Institute of Technology (Indian School of Mines)
- Dhanbad
- India
| | - Sridhar Sahu
- High Performance Computing Lab
- Department of Physics
- Indian Institute of Technology (Indian School of Mines)
- Dhanbad
- India
| | - Neelotpal Sen Sarma
- Advanced Materials Laboratory
- Physical Sciences Division
- Institute of Advanced Study in Science and Technology
- Guwahati-781035
- India
| | - Sagar Sharma
- Department of Chemistry
- School of Fundamental and Applied Sciences
- Assam Don Bosco University
- Guwahati-782402
- India
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