Vis-NIR spectroscopy with moving-window PLS method applied to rapid analysis of whole blood viscosity

Vis-NIR spectroscopic discriminant analysis of aflatoxin B1 excessive standard in peanut meal as feedstuff materials

A fast, simple and reagent-free detection method for aflatoxin B1 (AFB1) is of great significance to food safety and human health. Visible and near-infrared (Vis-NIR) spectroscopy was applied to the discriminant analysis of AFB1 excessive standard of peanut meal as feedstuff materials. Two types of excessive standard discriminant models based on spectral quantitative analysis with partial least squares (PLS) and direct pattern recognition with partial least squares-discrimination analysis (PLS-DA) were established, respectively. Multi-parameter optimization of Norris derivative filtering (NDF) was used for spectral preprocessing; the two-stage wavelength screening method based on equidistant combination-wavelength step-by-step phase-out (EC-WSP) was used for wavelength optimization. A rigorous sample experimental design of calibration-prediction-validation was utilized. The calibration and prediction samples were used for modeling and parameter optimization, and the selected model was validated using the independent validation samples. For quantitative analysis-based, the positive, negative and total recognition-accuracy rates in validation (RARV+, RARV-, and RARV) were 84.8 %, 74.6 % and 79.8 %, respectively; but, the relative root mean square error of prediction was as high as 51.0 %. For pattern recognition-based, the RARV+, RARV-, and RARV were 93.3 %, 90.5 % and 91.9 %, respectively. Moreover, the number of wavelengths N was drastically reduced to 17, and the discrete wavelength combination was in NIR overtone frequency region. The results indicated that, the EC-WSP-PLS-DA model achieved significantly better discrimination effect. Thus demonstrated that Vis-NIR spectroscopy has feasibility for the excessive standard discrimination of aflatoxin B1 in feedstuff materials.

Changeable moving window-standard normal variable transformation for visible-NIR spectroscopic analyses

Based on the assumption of point-by-point local linearity, the changeable moving window-standard normal variable (CMW-SNV) was proposed as a reasonable improvement of the classical SNV. The three examples of quantitative and qualitative visible-near-infrared (Vis-NIR) analysis, quantifications of soil organic matter and corn meal moisture, and discriminant of rice seeds identification, were used to validate the effects of the CMW-SNV, SNV and equal segmentation SNV (ES-SNV) methods. The ES-SNV is another improvement of the SNV, but its algorithm would cause artificial discontinuities of the corrected spectrum. The SNV, ES-SNV and CMW-SNV corrected spectra were used to establish partial least squares (PLS) or partial least squares-discriminant analysis (PLS-DA) models respectively. For soil and corn meal datasets in modeling, the CMW-SNV-PLS models were both significantly better than the global SNV-PLS models; the root mean square errors of prediction in modeling (SEPM) values had the relative decrease of 26.4% and 6.6% respectively. For rice seeds dataset in modeling, the CMW-SNV-PLS-DA model was significantly better than the global SNV-PLS-DA model; the total recognition-accuracy rates in modeling (RARM) value increased by 2.1%. For all three datasets, the CMW-SNV models were better than (or close to) ones of the ES-SNV models. The equidistant combination (EC) and wavelength step-by-step phase-out (WSP) methods were used to perform wavelength selection on the CMW-SNV corrected spectra, determining the optimal EC-WSP-PLS or EC-WSP-PLS-DA models. In independent validation of three datasets, the high precision and high recognition accuracy rates validation results were all obtained. The CMW-SNV was a localized natural improvement of the classic global SNV method, and its correction maintained continuity of the spectra. The number of wavelengths m of the correction window represented the scale of localized SNV, and the algorithm platform of CMW-SNV also included the optimization of parameter m, making the localized CMW-SNV method more reasonable.

Spectral separation degree method for Vis-NIR spectroscopic discriminant analysis of milk powder adulteration

Adulteration detection of adding ordinary milk powder to high-end dedicated milk powder is challenging due to the high similarity. Using visible and near-infrared (Vis-NIR) spectroscopy combined with k-nearest neighbor (kNN), the discriminant analysis models of pure brand milk powder and its adulterated milk powder (including unary and binary adulteration) were established. Standard normal variate transformation and Norris derivative filter (D = 2, S = 11, G = 5) were jointly used for spectral preprocessing. The separation degree and separation degree spectrum between two spectral populations were proposed and used to describe the differences between the two spectral populations, based on which, a novel wavelength selection method, named separation degree priority combination-kNN (SDPC-kNN), was proposed for wavelength optimization. SDPC-wavelength step-by-step phase-out-kNN (SDPC-WSP-kNN) models were established to further eliminate interference wavelengths and improve the model effect. The nineteen wavelengths in long-NIR region (1100-2498 nm) with a separation degree greater than 0 were used to establish single-wavelength kNN models, the total recognition-accuracy rates in prediction (RAR_P) all reached 100%, and the total recognition-accuracy rate in validation (RAR_V) of the optimal model (1174 nm) reached 97.4%. In the visible (400-780 nm) and short-NIR (780-1100 nm) regions with the separation degree all less than 0, the SDPC-WSP-kNN models were established. The two optimal models (N = 7, 22) were determined, the RAR_P values reached 100% and 97.4% respectively, and the RAR_V values reached 96.1% and 94.3% respectively. The results indicated that Vis-NIR spectroscopy combined with few-wavelength kNN has feasibility of high-precision milk powder adulteration discriminant. The few-wavelength schemes provided a valuable reference for designing dedicated miniaturized spectrometer of different spectral regions. The separation degree spectrum and SDPC can be used to improve the performance of spectral discriminant analysis. The SDPC method based on the separation degree priority proposed is a novel and effective wavelength selection method. It only needs to calculate the distance between two types of spectral sets at each wavelength with low computational complexity and good performance. In addition to combining with kNN, SDPC can also be combined with other classifier algorithms (e.g. PLS-DA, PCA-LDA) to expand the application scope of the method.

Modeling method and miniaturized wavelength strategy for near-infrared spectroscopic discriminant analysis of soy sauce brand identification

The identification of soy sauce brands can avoid adulteration and fraud, which is meaningful for food safety screening. Using visible and near-infrared (Vis-NIR) spectroscopy combined with k-nearest neighbor (kNN), the four-category discriminant models of soy sauce brands were established. The soy sauce of three brands (identification) and the other ten brands (interference) were collected, and a total of four categories of samples were obtained. The spectral datasets of two measurement modals (1 mm, 10 mm) were obtained. Based on moving-window (MW) waveband screening and wavelength step-by-step phase-out (WSP), the MW-WSP-kNN algorithm was proposed and applied to the wavelength optimization for the four-category discriminant analysis. Using calibration-prediction-validation experiment design, various high accuracy models with a small number of wavelengths located in NIR region were determined. In the independent validation, for the 1 mm measurement modal, the selected thirty-five dual-wavelength models and one three-wavelength model were located in NIR combined and overtone frequency regions respectively, all achieved 100% total recognition accuracy rate (RAR_Total); for the 10 mm measurement modal, the selected seven three-wavelength models located in NIR overtone frequency region all reached more than 96.8% RAR_Total, and the optimal RAR_Total was 97.8%. The results showed the feasibility of small number of wavelengths' NIR spectroscopy applied to multi-category discriminant of soy sauce brands, with the advantages of rapid, simple and miniaturized. The proposed various small number of wavelengths' models provided a valuable reference for the design of small dedicated spectrometer with different measurement modals. The integrated optimization method and wavelength selection strategy here are also expected to be applied to other fields.

Visible and Near-Infrared Spectroscopy Combined With Bayes Classifier Based on Wavelength Model Optimization Applied to Wine Multibrand Identification

The identification of high-quality wine brands can avoid adulteration and fraud and protect the rights and interests of producers and consumers. Since the main components of wine are roughly the same, the characteristic components that can distinguish wine brands are usually trace amounts and not unique. The conventional quantitative detection method for brand identification is complicated and difficult. The naive Bayes (NB) classifier is an algorithm based on probability distribution, which is simple and particularly suitable for multiclass discriminant analysis. However, the absorbance probability between spectral wavelengths is not necessarily strongly independent, which limits the application of Bayes method in spectral pattern recognition. This research proposed a Bayes classifier algorithm based on wavelength optimization. First, a large-scale wavelength screening for equidistant combination (EC) was performed, and then wavelength step-by-step phase-out (WSP) was carried out to reduce the correlation between wavelengths and improve the accuracy of Bayes discrimination. The proposed EC-WSP-Bayes method was applied to the 5-category discriminant analysis of wine brand identification based on visible and near-infrared (Vis-NIR) spectroscopy. Among them, four types of wine brands were collected from regular sales channels as identification brands. The fifth type of samples was composed of 21 other commercial brand wines and home-brewed wines from various sources, as the interference brand. The optimal EC-WSP-Bayes model was selected, the corresponding wavelength combination was 404, 600, 992, 2,070, 2,266, and 2,462 nm located in the visible light, shortwave NIR, and combination frequency regions. In modeling and independent validation, the total recognition accuracy rate (RAR Total ) reached 98.1 and 97.6%, respectively. The technology is quick and easy, which is of great significance to regulate the alcohol market. The proposed model of less-wavelength and high-efficiency (N = 6) can provide a valuable reference for small special instruments. The proposed integrated chemometric method can reduce the correlation between wavelengths, improve the recognition accuracy, and improve the applicability of the Bayesian method.

Performance Improvement of NIR Spectral Pattern Recognition from Three Compensation Models’ Voting and Multi-Modal Fusion

Inspired by aquaphotomics, the optical path length of measurement was regarded as a perturbation factor. Near-infrared (NIR) spectroscopy with multi-measurement modals was applied to the discriminant analysis of three categories of drinking water. Moving window-k nearest neighbor (MW-kNN) and Norris derivative filter were used for modeling and optimization. Drawing on the idea of game theory, the strategy for two-category priority compensation and three-model voting with multi-modal fusion was proposed. Moving window correlation coefficient (MWCC), inter-category and intra-category MWCC spectra, and k-shortest distances plotting with MW-kNN were proposed to evaluate weak differences between two spectral populations. For three measurement modals (1 mm, 4 mm, and 10 mm), the optimal MW-kNN models, and two-category priority compensation models were determined. The joint models for three compensation models’ voting were established. Comprehensive discrimination effects of joint models were better than their sub-models; multi-modal fusion was better than single-modal fusion. The best joint model was the dual-modal fusion of compensation models of one- and two-category priority (1 mm), one- and three-category priority (10 mm), and two- and three-category priority (1 mm), validation’s total recognition accuracy rate reached 95.5%. It fused long-wave models (1 mm, containing 1450 nm) and short-wave models (10 mm, containing 974 nm). The results showed that compensation models’ voting and multi-modal fusion can effectively improve the performance of NIR spectral pattern recognition.

A hybrid variable selection and modeling strategy for the determination of target compounds in different spectral datasets

In this paper, a hybrid technique is proposed to establish quantitative models for the determination of target compounds in different spectral datasets. The proposed hybrid method is the hybridization of interval partial least squares (iPLS) method with gradient descent (GD) algorithm. Here, the novelty of the proposed method is that the iPLS method is applied to variable selection and the GD algorithm is employed to establish quantitative models based on the selected optimal variables. In the application of the hybrid iPLS-GD method, the factors, i.e., the number of the interval for the iPLS method and the learning rate, the number of iterations for the GD method, that affect the quantitative accuracy of the method are optimized and determined. Then three spectral datasets, including the near-infrared spectroscopy (NIR) dataset, nuclear magnetic resonance (¹H NMR) dataset and excitation-emission matrix fluorescence (EEM) dataset, are used to test and verify the performance of the iPLS-GD method. We compare the hybrid iPLS-GD method with the PLS and iPLS methods from the aspects of modeling ability and predictive ability. The results demonstrated that the iPLS-GD method can be used as an effective and promising tool for the determination of target compounds in complex samples in practice.

Rapid and simultaneous analysis of multiple wine quality indicators through near-infrared spectroscopy with twice optimization for wavelength model

Alcohol, total sugar, total acid, and total phenol contents are the main indicators of wine quality detection. This study aims to establish simultaneous analysis models for the four indicators through near-infrared (NIR) spectroscopy with wavelength optimization. A Norris derivative filter (NDF) platform with multiparameter optimization was established for spectral pretreatment. The optimal parameters (i.e., derivative order, number of smoothing points, and number of differential gaps) were (2, 9, 3) for alcohol, (1, 19, 5) for total sugar, (1, 17, 11) for total acid, and (1, 1, 1) for total phenol. The equidistant combination-partial least squares (EC-PLS) was used for large-scale wavelength screening. The wavelength step-by-step phase-out PLS (WSP-PLS) and exhaustive methods were used for secondary optimization. The final optimization models for the four indicators included 7, 10, 15, and 13 wavelengths located in the overtone or combination regions, respectively. In an independent validation, the root mean square errors, correlation coefficient for prediction (i.e., SEP and R_P), and ratio of performance-to-deviation (RPD) were 0.41 v/v, 0.947, and 3.2 for alcohol; 1.48 g/L, 0.992, and 6.8 for total sugar; 0.68 g/L, 0.981, and 5.1 for total acid; and 0.181 g/L, 0.948, and 2.9 for total phenol. The results indicate high correlation, low error, and good overall prediction performance. Consequently, the established reagent-free NIR analytical models are important in the rapid and real-time quality detection of the wine fermentation process and finished products. The proposed wavelength models provide a valuable reference for designing small dedicated instruments.

Rapid and simultaneous analysis of direct and indirect bilirubin indicators in serum through reagent-free visible-near-infrared spectroscopy combined with chemometrics

Indirect (IBil), direct (DBil) and total (TBil) bilirubin are important clinical indicators of hepatobiliary diseases, which require rapid detection in diagnosis and treatment. IBil and DBil have a structural relationship with several macromolecules in hepatobiliary metabolism. Here, the rapid analysis models for bilirubin indicators using serum visible-near-infrared (Vis-NIR) spectroscopy were established. Norris derivative filter with optimisation was used for spectral pretreatment; the optimal parameters (derivative order, number of smoothing points, number of differential gaps) were (2, 15, 9) for IBil; (2, 13, 9) for DBil, respectively. Equidistant combination-partial least squares (EC-PLS) was used for large-scale wavelength screening. Wavelength step-by-step phase-out PLS (WSP-PLS) was used for secondary wavelength optimisation. The wavelength models of the optimal EC-WSP-PLS for IBil and DBil included 11 and 18 wavelengths, respectively. In independent validation, the root-mean-square errors and correlation coefficient for prediction (SEP, R_P), and ratio of performance-to-deviation (RPD) were 0.90 μmol L^-1, 0.975, and 4.4 for IBil; 0.71 μmol L^-1, 0.955, and 3.3 for DBil, respectively. TBil was subjected to spectral analysis, and the summation of the prediction values of IBil and DBil was compared. The latter was obviously better, and SEP, R_P, RPD were 0.82 μmol L^-1, 0.990, 7.1, respectively. The results for IBil, DBil and TBil indicated high correlation, low error and good overall prediction ability and confirmed the feasibility of the simultaneous analysis of bilirubin indicators through reagent-free serum Vis-NIR spectroscopy. The proposed method is crucial for the rapid screening of large populations and the treatment of hepatobiliary diseases.

A rapid quantification method for the screening indicator for β-thalassemia with near-infrared spectroscopy

Near-infrared (NIR) spectroscopy combined with chemometrics was applied to rapidly analyse haemoglobin A2 (HbA₂) for β-thalassemia screening in human haemolysate samples. The relative content indicator HbA₂ was indirectly quantified by simultaneous analysis of two absolute content indicators (Hb and Hb∙HbA₂). According to the comprehensive prediction effect of the multiple partitioning of calibration and prediction sets, the parameters were optimized to achieve modelling stability, and the preferred models were validated using the samples not involved in modelling. Savitzky-Golay smoothing was firstly used for the spectral pretreatment. The absorbance optimization partial least squares (AO-PLS) was used to eliminate high-absorption wave-bands appropriately. The equidistant combination PLS (EC-PLS) was further used to optimize wavelength models. The selected optimal models were I=856nm, N=16, G=1 and F=6 for Hb and I=988nm, N=12, G=2 and F=5 for Hb∙HbA₂. Through independent validation, the root-mean-square errors and correlation coefficients for prediction (RMSEP, R_P) were 3.50gL^-1 and 0.977 for Hb and 0.38gL^-1 and 0.917 for Hb∙HbA₂, respectively. The predicted values of relative percentage HbA₂ were further calculated, and the calculated RMSEP and R_P were 0.31% and 0.965, respectively. The sensitivity and specificity for β-thalassemia both reached 100%. Therefore, the prediction of HbA₂ achieved high accuracy for distinguishing β-thalassemia. The local optimal models for single parameter and the optimal equivalent model sets were proposed, providing more models to match possible constraints in practical applications. The NIR analysis method for the screening indicator of β-thalassemia was successfully established. The proposed method was rapid, simple and promising for thalassemia screening in a large population.

Optimization of rice amylose determination by NIR-spectroscopy using PLS chemometrics algorithms

Determining amylose content in rice with near infrared (NIR) spectroscopy, associated with a suitable multivariate regression method, is both feasible and relevant for the rice business to enable Process Analytical Technology applications for this critical factor, but it has not been fully exploited. Due to it being time-consuming and prone to experimental errors, it is urgent to develop a low-cost, nondestructive and 'on-line' method able to provide high accuracy and reproducibility. Different rice varieties and specific chemometrics tools, such as partial least squares (PLS), interval-PLS, synergy interval-PLS and moving windows-PLS, were applied to develop an optimal regression model for rice amylose determination. The model performance was evaluated by the root mean square error of prediction (RMSEP) and the correlation coefficient (R). The high performance of the siPLS method (R=0.94; RMSEP=1.938; 8941-8194cm^-1; 5592-5045cm^-1; and 4683-4335cm^-1) shows the feasibility of NIR technology for determination of the amylose with high accuracy.