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Shi Y, Zhou M, Kou M, Zhang K, Zhang X, Kong X. Simultaneous quantitative chiral analysis of four isomers by ultraviolet photodissociation mass spectrometry and artificial neural network. Front Chem 2023; 11:1129671. [PMID: 36970407 PMCID: PMC10034024 DOI: 10.3389/fchem.2023.1129671] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 03/02/2023] [Indexed: 03/11/2023] Open
Abstract
Although mass spectrometry (MS) has its unique advantages in speed, specificity and sensitivity, its application in quantitative chiral analysis aimed to determine the proportions of multiple chiral isomers is still a challenge. Herein, we present an artificial neural network (ANN) based approach for quantitatively analyzing multiple chiral isomers from their ultraviolet photodissociation mass spectra. Tripeptide of GYG and iodo-L-tyrosine have been applied as chiral references to fulfill the relative quantitative analysis of four chiral isomers of two dipeptides of L/DHisL/DAla and L/DAspL/DPhe, respectively. The results show that the network can be well-trained with limited sets, and have a good performance in testing sets. This study shows the potential of the new method in rapid quantitative chiral analysis aimed at practical applications, with much room for improvement in the near future, including selecting better chiral references and improving machine learning methods.
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Affiliation(s)
- Yingying Shi
- State Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin, China
| | - Ming Zhou
- State Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin, China
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
| | - Min Kou
- State Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin, China
| | - Kailin Zhang
- Life and Health Intelligent Research Institute, Tianjin University of Technology, Tianjin, China
| | - Xianyi Zhang
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
| | - Xianglei Kong
- State Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin, China
- Tianjin Key Laboratory of Biosensing and Molecular Recognition, College of Chemistry, Nankai University, Tianjin, China
- Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, China
- *Correspondence: Xianglei Kong,
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Lai YS, Chen YL, Lin CC, Su YH. Ultrafast chiral peptides purification via surface plasmon enhanced spin selectivity. Biosens Bioelectron 2022; 211:114339. [PMID: 35588636 DOI: 10.1016/j.bios.2022.114339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Accepted: 05/02/2022] [Indexed: 11/17/2022]
Abstract
By D-arginine and L-arginine chiral peptides induced spin selectivity and Au NPs enhanced spin polarization, chiral peptides purification has been effectively simplified and the purification performance has raised from a mixture system. The angular momentums of light are operated by the polarizer and wave plates. Au NPs decorated ZnO nanorods electrodes are utilized to modulate the polarization of spintronic. Seed growth methods are for synthesizing spherical Au NPs. UV light reduction methods are for urchin-liked Au NPs. Au NPs are decorated on ZnO nanorods electrodes for rising photon to electron conversion efficiency and enhancing spin polarization rates by surface plasmon effect. From our results, photon to the electron conversion efficiency of ZnO nanorods electrodes has effectively enhanced by urchin-liked Au NPs decorating. Ultrahigh localized plasmon conversion efficiency as high as 60% was also obtained. Besides, density functional theory (DFT) calculations simulated the force on spintronic. Since the D-arginine and L-arginine are on Au substrate, DFT results demonstrate different angular momentum and spin polarization coupling. Along with urchin-liked Au NPs rising chiral induced spin polarization by surface plasmon resonance, the sensitivity of chiral arginine has been raised around 5000% from bare ZnO nanorods electrodes. The purification and separation time of a specific chiral arginine only needs 5 min.
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Affiliation(s)
- Yi-Sheng Lai
- Department of Material Science and Engineering, National Cheng Kung University, Taiwan
| | - Yu-Lin Chen
- Department of Material Science and Engineering, National Cheng Kung University, Taiwan
| | - Chia-Chun Lin
- Department of Material Science and Engineering, National Cheng Kung University, Taiwan
| | - Yen-Hsun Su
- Department of Material Science and Engineering, National Cheng Kung University, Taiwan.
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Zhang K, Shi Y, Du M, Xu Y, Wang Y, Kong X. Versatile Double-Beam Confocal Laser System Combined with a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer for Photodissociation Mass Spectrometry and Spectroscopy. Anal Chem 2021; 93:9056-9063. [PMID: 34165954 DOI: 10.1021/acs.analchem.1c00248] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Both infrared multiphoton dissociation (IRMPD) and ultraviolet photodissociation (UVPD) play important roles in tandem mass spectrometry and the action spectroscopy of organic and biological molecules. A flexible combination of the two methods may provide researchers with more versatile and powerful ion activation/dissociation choices for structural characterization and spectroscopic studies. Here, we report the integration of two tunable lasers with a Fourier transform ion cyclotron resonance mass spectrometer in a confocal mode, which offers multiple capabilities for photon activation/dissociation experiments. The two overlapped beams can be introduced into the cell individually, sequentially, or simultaneously, providing highly flexible and diverse activation schemes. The setup can also measure the UVPD or IRMPD action spectra of fragment ions generated by previous photon dissociation processes. In addition, the multistage tandem-in-time mass spectrometry performance up to MS4, including three different activation methods in a single cell, has also been demonstrated.
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Affiliation(s)
- Kailin Zhang
- State Key Laboratory of Elemento-organic Chemistry, Collage of Chemistry, Nankai University, Tianjin 300071, China.,School of Precision Instrument and Opto-Electronics Engineering, Tianjin University, Tianjin 300072, China
| | - Yingying Shi
- State Key Laboratory of Elemento-organic Chemistry, Collage of Chemistry, Nankai University, Tianjin 300071, China
| | - Mengying Du
- State Key Laboratory of Elemento-organic Chemistry, Collage of Chemistry, Nankai University, Tianjin 300071, China
| | - Yicheng Xu
- State Key Laboratory of Elemento-organic Chemistry, Collage of Chemistry, Nankai University, Tianjin 300071, China
| | - Yan Wang
- School of Precision Instrument and Opto-Electronics Engineering, Tianjin University, Tianjin 300072, China
| | - Xianglei Kong
- State Key Laboratory of Elemento-organic Chemistry, Collage of Chemistry, Nankai University, Tianjin 300071, China.,Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
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Murashima H, Fujihara A. Quantification of monosaccharide enantiomers using optical properties of hydrogen-bonded tryptophan. Anal Biochem 2021; 619:114151. [PMID: 33684343 DOI: 10.1016/j.ab.2021.114151] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Revised: 01/22/2021] [Accepted: 03/01/2021] [Indexed: 10/22/2022]
Abstract
Chiral recognition between amino acids and monosaccharides in the gas phase was investigated as a model for chemical evolution in interstellar molecular clouds. Ultraviolet (UV) photodissociation spectra and product ion spectra of cold gas-phase hydrogen-bonded clusters of protonated tryptophan (Trp) and a pentose, including ribose and arabinose, were obtained using a tandem mass spectrometer equipped with an electrospray ionization source and a temperature-controlled ion trap. The relative intensity of the signal arising from the S1-S0 transition of protonated Trp observed at approximately 285 nm in the UV photodissociation spectrum of homochiral H+(d-Trp)(d-ribose) was significantly higher than that of heterochiral H+(l-Trp)(d-ribose), corresponding to the ππ* state of the Trp indole ring. Optical properties of Trp in the clusters induced by 285-nm photoexcitation were applied to the identification and quantification of pentose enantiomers in solution. Pentose enantiomeric excess in solution was determined from relative abundances observed in a single product ion spectrum of 285-nm photoexcited hydrogen-bonded clusters of H+(l-Trp) and pentose. A mixture of two pentoses could also be quantified by this method. The geometric and electronic structures of Trp enable recognition of biological molecules through hydrogen bonding.
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Affiliation(s)
- Hiromori Murashima
- Department of Chemistry, Graduate School of Science, Osaka Prefecture University, Osaka, 599-8531, Japan
| | - Akimasa Fujihara
- Department of Chemistry, Graduate School of Science, Osaka Prefecture University, Osaka, 599-8531, Japan.
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Murashima H, Fujihara A. Molecular Adsorption on Cold Gas-Phase Hydrogen-Bonded Clusters of Chiral Molecules. ORIGINS LIFE EVOL B 2021; 51:61-70. [PMID: 33587241 DOI: 10.1007/s11084-021-09605-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Accepted: 02/03/2021] [Indexed: 11/29/2022]
Abstract
Gas-phase molecular adsorption was investigated as a model for molecular cloud formation. Molecular adsorption on cold gas-phase hydrogen-bonded clusters containing protonated tryptophan (Trp) enantiomers and monosaccharides such as methyl-α-D-glucoside, D-ribose, and D-arabinose was detected using a tandem mass spectrometer equipped with an electrospray ionization source and cold ion trap. The adsorption sites on the surface of cold gas-phase hydrogen-bonded cluster ions were quantified using gas-phase N2 adsorption-mass spectrometry. The gas-phase N2 adsorption experiments indicated that the number of adsorption sites on the surface of the hydrogen-bonded heterochiral clusters containing L-Trp and D-monosaccharides exceeded the number of adsorption sites on the homochiral clusters containing D-Trp and D-monosaccharides. H2O molecules were preferentially adsorbed on the heterochiral clusters, and larger water clusters were formed in the gas phase. Physical and chemical properties of cold gas-phase hydrogen-bonded clusters containing biological molecules were useful for investigating enantiomer selectivity and chemical evolution in interstellar molecular clouds.
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Affiliation(s)
- Hiromori Murashima
- Department of Chemistry, Graduate School of Science, Osaka Prefecture University, Osaka, 599-8531, Japan
| | - Akimasa Fujihara
- Department of Chemistry, Graduate School of Science, Osaka Prefecture University, Osaka, 599-8531, Japan.
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Murashima H, Fujihara A. Wavelength dependence of chiral recognition using ions between photoexcited tryptophan and sugars. Chem Phys 2020. [DOI: 10.1016/j.chemphys.2020.110818] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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Hanaichi S, Fujihara A. Identification and quantification of leucine and isoleucine residues in peptides using photoexcited tryptophan. Amino Acids 2020; 52:1107-1113. [PMID: 32710184 DOI: 10.1007/s00726-020-02875-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Accepted: 07/19/2020] [Indexed: 10/23/2022]
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Ochiai N, Murashima H, Fujihara A. Quantification of hydroxy groups in carbohydrates using gas-phase N2 adsorption. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137484] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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Huang L, Gao Z, Yin X, He Q, Pan Y. Exploration of disaccharide as reference towards chiral recognition by the kinetic method. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2020; 34:e8764. [PMID: 32079037 DOI: 10.1002/rcm.8764] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Revised: 01/17/2020] [Accepted: 02/17/2020] [Indexed: 06/10/2023]
Abstract
RATIONALE A potential use of disaccharides was found as reference compounds in the kinetic method for chiral recognition and enantiomeric quantification. METHODS The experimental procedure consists of three steps: (1) mixing a metal salt, an analyte and a disaccharide at a molar ratio of 1:2:2 with an analyte concentration of 20 μM; (2) introducing the mixture into an electrospray ionization (ESI) mass spectrometry source; (3) isolating the ion [MII (ref*)2 (A) - H]+ and subjecting it to dissociation. Then through the relative ratio of two product ions combined with the kinetic method, chiral recognition and enantiomeric quantification can be achieved. RESULTS The method was verified with good chiral recognition for ten chiral amino acids and three chiral drugs. Among the ten amino acids, Tyr was observed to show best chiral selectivity (Rchiral = 1.62) and good linearity with the correlation coefficient R2 = 0.9991 for the quantitation of the enantiomeric excess (ee) of D-Tyr. Among the tested chiral drugs, naproxen showed best chiral selectivity with Rchiral = 1.56 and good linearity with the correlation coefficient R2 = 0.9997 for the quantitation of the ee of R-naproxen. CONCLUSIONS This established approach proves that a disaccharide can serve as a reference compound for chiral recognition using the kinetic method.
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Affiliation(s)
- Lili Huang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Zhan Gao
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Xinchi Yin
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Quan He
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Yuanjiang Pan
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
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Nguyen DT, Oki N, Fujihara A. Determination of enantiomeric excess of amino acids using photodissociation of cold gas-phase Na + -containing clusters. JOURNAL OF MASS SPECTROMETRY : JMS 2019; 54:629-633. [PMID: 31094029 DOI: 10.1002/jms.4373] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Revised: 04/15/2019] [Accepted: 05/01/2019] [Indexed: 06/09/2023]
Affiliation(s)
- Doan Thuc Nguyen
- Department of Chemistry, Osaka Prefecture University, Osaka, 599-8531, Japan
| | - Narumi Oki
- Department of Chemistry, Osaka Prefecture University, Osaka, 599-8531, Japan
| | - Akimasa Fujihara
- Department of Chemistry, Osaka Prefecture University, Osaka, 599-8531, Japan
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Fujihara A, Shimada A. Gas-phase N2 adsorption on mass-selected hydrogen-bonded cluster ions. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.01.029] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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Nguyen DT, Fujihara A. Chiral Recognition in Cold Gas-Phase Cluster Ions of Carbohydrates and Tryptophan Probed by Photodissociation. ORIGINS LIFE EVOL B 2018; 48:395-406. [PMID: 30953250 DOI: 10.1007/s11084-019-09574-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Accepted: 03/19/2019] [Indexed: 12/20/2022]
Abstract
Chiral recognition between tryptophan (Trp) and carbohydrates such as D-glucose (D-Glc), methyl-α-D-glucoside (D-glucoside), D-maltose, and D-cellobiose in cold gas-phase cluster ions was investigated as a model for chemical evolution in interstellar molecular clouds using a tandem mass spectrometer containing a cold ion trap. The photodissociation mass spectra of cold gas-phase clusters that contained Na+, Trp enantiomers, and D-maltose showed that Na+(D-Glc) was formed via the glycosidic bond cleavage of D-maltose from photoexcited homochiral Na+(D-Trp)(D-maltose), while the dissociation did not occur in heterochiral Na+(L-Trp)(D-maltose). The enantiomer-selective dissociation was also observed in the case of D-cellobiose. The enantiomer-selective glycosidic bond cleavage of disaccharides suggested that photoexcited D-Trp could prevent chemical evolution of sugar chains from D-enantiomer of carbohydrates in molecular clouds. The spectra of gas-phase clusters that contained Na+, Trp enantiomers, and D-Glc indicated that enantiomer-selective protonation of L-Trp from D-Glc could induce enantiomeric excess via collision-activated dissociation of the protonated L-Trp. In the case of protonated clusters, photoexcited H+(L-Trp) dissociated via Cα-Cβ bond cleavage in the presence of D-Glc or D-glucoside, where the excited states of H+(L-Trp) contributed to the enantiomer-selective reaction in the clusters. These enantiomer selectivities in cold gas-phase clusters indicated that chirality of a molecule induced enantiomeric excess of other molecules via enantiomer-selective reactions in molecular clouds.
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Affiliation(s)
- Doan Thuc Nguyen
- Department of Chemistry, Graduate School of Science, Osaka Prefecture University, Osaka, 599-8531, Japan
| | - Akimasa Fujihara
- Department of Chemistry, Graduate School of Science, Osaka Prefecture University, Osaka, 599-8531, Japan.
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