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Hopkins JR, Bever JD. Arbuscular mycorrhizal fungal spore communities and co-occurrence networks demonstrate host-specific variation throughout the growing season. MYCORRHIZA 2024:10.1007/s00572-024-01168-2. [PMID: 39292437 DOI: 10.1007/s00572-024-01168-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Accepted: 08/29/2024] [Indexed: 09/19/2024]
Abstract
Microbial community assembly involves a series of ecological filtering mechanisms that determine the composition of microbial communities. While the importance of both broad and local level factors on microbial communities has been reasonably well studied, this work often is limited to single observations and neglects to consider how communities change over time (i.e., seasonal variation). Because seasonal variation is an important determinant of community assembly and determines the relative importance of community assembly filters, this represents a key knowledge gap. Due to their close associations with seasonal variation in plant growth and fitness, arbuscular mycorrhizal (AM) fungi are useful groups for assessing the importance of seasonal dynamics in microbial community assembly. We tested how seasonal variation (spring vs. summer), plant life history stage (vegetative vs. flowering), and host plant species (Baptisia bracteata var. leucophaea & Andropogon gerardii) influenced AM fungal spore community assembly. AM fungal spore community temporal dynamics were closely linked to plant host species and life history stage. While AM fungal spore communities demonstrated strong turnover between the spring (e.g., higher sporulation) and late summer (e.g., higher diversity), the strength and direction of these changes was modified by host plant species. Here we demonstrate the importance of considering temporal variation in microbial community assembly, and also show how plant-microbe interactions can modify seasonal trends in microbial community dynamics.
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Affiliation(s)
- Jacob R Hopkins
- Evolution, Ecology, and Organismal Biology Department, The Ohio State University, 318 W 12th Avenue Aronoff Laboratory floor 3 Columbus, Columbus, OH, 43201, USA.
| | - James D Bever
- Department of Ecology & Evolutionary Biology, University of Kansas, 1200 Sunnyside Avenue Lawrence, KS, 66045, USA
- Kansas Biological Survey, University of Kansas, 2101 Constant Ave. Lawrence, KS, 66047, USA
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2
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Bello C, Dent DH, Crowther TW. Animals in restoration to achieve climate biodiversity targets. Trends Ecol Evol 2024:S0169-5347(24)00217-9. [PMID: 39362801 DOI: 10.1016/j.tree.2024.08.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2024] [Revised: 08/19/2024] [Accepted: 08/20/2024] [Indexed: 10/05/2024]
Abstract
By recognizing the role of animals as restoration drivers, we have a unique opportunity to combine climate and biodiversity policy frameworks and meet targets synergistically. About 25% of forest restoration projects could benefit from animals contributing to both frameworks. In 50% of projects, active actions are needed to improve outcomes.
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Affiliation(s)
- Carolina Bello
- Department of Environmental Systems Science, ETH, Zürich, Switzerland.
| | - Daisy H Dent
- Department of Environmental Systems Science, ETH, Zürich, Switzerland; Smithsonian Tropical Research Institute, Panama, Republic of Panama; Max Planck Institute for Animal Behavior, Konstanz, Germany
| | - Thomas W Crowther
- Department of Environmental Systems Science, ETH, Zürich, Switzerland
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Meyer E, Stoffel SCG, de Almeida AFN, do Amaral Scarsanella J, Vieira AS, Ventura BS, Canei AD, Bortolini JG, de Faria SM, Soares CRFS, Lovato PE. Rhizophagus intraradices and Azospirillum brasilense improve growth of herbaceous plants and soil biological activity in revegetation of a recovering coal-mining area. Braz J Microbiol 2024; 55:2827-2837. [PMID: 38769246 PMCID: PMC11405746 DOI: 10.1007/s42770-024-01390-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Accepted: 05/14/2024] [Indexed: 05/22/2024] Open
Abstract
We assessed, in a field experiment, the effects of arbuscular mycorrhizal fungi (Rhizophagus intraradices) and plant growth-promoting bacteria (Azospirillum brasilense) on the soil biological activity and the growth of key pioneer species used in the revegetation of coal-mining areas undergoing recovery. We applied four inoculation treatments to the pioneer plant species (Lablab purpureus, Paspalum notatum, Crotalaria juncea, Neonotonia wightii, Stylosanthes guianensis, Andropogon gayanus and Trifolium repens) used in the recovery process: NI (Control - Non-inoculated), AZO (A. brasilense), AMF (R. intraradices), and co-inoculation of AZO and AMF. On the 75th and 180th days, we measured plant dry mass, mycorrhizal colonization, N and P concentration, and accumulation in plant tissue. We collected soil to quantify glomalin content and soil enzyme activity. After 180 days, we did a phytosociological characterization of the remaining spontaneous plants.The both microorganisms, singly or co-inoculated, promoted increases in different fractions of soil glomalin, acid phosphatase activity, and fluorescein diacetate activity at 75 and 180 days. The inoculation was linked to higher plant biomass production (62-89%) and increased plant P and N accumulation by 34-75% and 70-85% at 180 days, compared with the non-inoculated treatment. Among the pioneer species sown Crotalaria juncea produced the highest biomass at the 75th and 180th days (67% and 76% of all biomass), followed by Lablab purpureus (3% and 0.5%), while the other species failed to establish. At 180 days, we observed twenty spontaneous plant species growing in the area, primarily from the Poaceae family (74%). That suggests that the pioneer species present in the area do not hinder the ecological succession process. Inoculation of R. intraradices and A. brasilense, isolated or combined, increases soil biological activity, growth, and nutrient accumulation in key pioneer plant species, indicating the potential of that technique for the recovery of lands degraded by coal mining.
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Affiliation(s)
- Edenilson Meyer
- Centro de Ciências Agrárias, Departamento de Engenharia Rural, Universidade Federal de Santa Catarina (UFSC), 88034-000, Florianópolis, SC, Brasil.
| | - Shantau Camargo Gomes Stoffel
- Centro de Ciências Biológicas, Departamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de Santa Catarina (UFSC), 88040-900, Florianópolis, SC, Brasil
| | - Anna Flávia Neri de Almeida
- Centro de Ciências Agrárias, Departamento de Engenharia Rural, Universidade Federal de Santa Catarina (UFSC), 88034-000, Florianópolis, SC, Brasil
| | - Juliana do Amaral Scarsanella
- Centro de Ciências Agrárias, Departamento de Engenharia Rural, Universidade Federal de Santa Catarina (UFSC), 88034-000, Florianópolis, SC, Brasil
| | - André Steiner Vieira
- Centro de Ciências Biológicas, Departamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de Santa Catarina (UFSC), 88040-900, Florianópolis, SC, Brasil
| | - Barbara Santos Ventura
- Centro de Ciências Agrárias, Departamento de Engenharia Rural, Universidade Federal de Santa Catarina (UFSC), 88034-000, Florianópolis, SC, Brasil
| | - Andressa Danielli Canei
- Centro de Ciências Biológicas, Departamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de Santa Catarina (UFSC), 88040-900, Florianópolis, SC, Brasil
| | - Juliana Gress Bortolini
- Centro de Ciências Agrárias, Departamento de Engenharia Rural, Universidade Federal de Santa Catarina (UFSC), 88034-000, Florianópolis, SC, Brasil
| | | | - Cláudio Roberto Fonseca Sousa Soares
- Centro de Ciências Biológicas, Departamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de Santa Catarina (UFSC), 88040-900, Florianópolis, SC, Brasil
| | - Paulo Emílio Lovato
- Centro de Ciências Agrárias, Departamento de Engenharia Rural, Universidade Federal de Santa Catarina (UFSC), 88034-000, Florianópolis, SC, Brasil
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Brunton-Martin A, Wood J, Gaskett AC. Evidence for adaptation of colourful truffle-like fungi for birds in Aotearoa-New Zealand. Sci Rep 2024; 14:18908. [PMID: 39143118 PMCID: PMC11324954 DOI: 10.1038/s41598-024-67333-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 07/10/2024] [Indexed: 08/16/2024] Open
Abstract
Propagule dispersal is a crucial aspect of the survival and reproduction of sessile organisms, such as plants and fungi. As such, the colours of fleshy fruits serve as a visual cue for animal dispersers. However, little is known about how, or whether, specific traits of fungal fruiting bodies, such as colour or shape, attract animal dispersers, and additionally the identities of fungal dispersers are poorly understood. Globally, most truffle-like fungi are dull-coloured, subterranean, and likely have scents that are attractive to mammalian dispersers. In Aotearoa-New Zealand, however, brightly coloured truffle-like fungi that emerge from the forest floor have seemingly proliferated. This proliferation has prompted the hypothesis that they are adapted to dispersal by a bird-dominated fauna. In our study, we used the literature and citizen science data (GBIF) to explore whether colourful species occur at a higher proportion of the total truffle-like fungi flora in Aotearoa-New Zealand than elsewhere in the world. In addition, we tested for a relationship between biotic factors (avian frugivory and forest cover) and abiotic factors (precipitation, radiation, and temperature) and the prevalence of brightly coloured truffle-like fungi across the world. The most colourful truffle-like fungi are in three defined regions: Australia, South and Central America and the Caribbean, and Aotearoa-NZ. Potential dispersers and the environment both relate to the distribution of truffle-like fungi: we found that increasing levels of frugivory were associated with higher proportions of colourful truffle-like fungi. This finding provides new insights into drivers of certain fungal traits, and their interactions between birds and fungi. Unique ecosystems, such as Aotearoa-NZ's bird-dominated biota, provide fascinating opportunities to explore how plants and fungi interact with the sensory systems of animals.
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Affiliation(s)
- Amy Brunton-Martin
- Ecosystems and Conservation, Manaaki Whenua Landcare Research, Lincoln, 7640, New Zealand.
- School of Biological Sciences, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand.
| | - Jamie Wood
- School of Biological Sciences, University of Adelaide, Adelaide, SA, 5000, Australia
| | - Anne C Gaskett
- School of Biological Sciences, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand
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Metzler P, Ksiazek-Mikenas K, Chaudhary VB. Tracking arbuscular mycorrhizal fungi to their source: active inoculation and passive dispersal differentially affect community assembly in urban soils. THE NEW PHYTOLOGIST 2024; 242:1814-1824. [PMID: 38294152 DOI: 10.1111/nph.19526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 12/17/2023] [Indexed: 02/01/2024]
Abstract
Communities of arbuscular mycorrhizal (AM) fungi assemble passively over time via biotic and abiotic mechanisms. In degraded soils, AM fungal communities can assemble actively when humans manage mycorrhizas for ecosystem restoration. We investigated mechanisms of urban AM fungal community assembly in a 2-yr green roof experiment. We compared AM fungal communities in inoculated and uninoculated trays to samples from two potential sources: the inoculum and air. Active inoculation stimulated more distinct and diverse AM fungal communities, an effect that intensified over time. In the treatment trays, 45% of AM fungal taxa were detected in the inoculum, 2% were detected in aerial samples, 23% were detected in both inoculum and air, and 30% were not detected in either source. Passive dispersal of AM fungi likely resulted in the successful establishment of a small number of species, but active inoculation with native AM fungal species resulted in an immediate shift to a diverse and unique fungal community. When urban soils are constructed or modified by human activity, this is an opportunity for intervention with AM fungi that will persist and add diversity to that system.
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Affiliation(s)
- Paul Metzler
- Environmental Studies Department, Dartmouth College, Hanover, NH, 03755, USA
| | | | - V Bala Chaudhary
- Environmental Studies Department, Dartmouth College, Hanover, NH, 03755, USA
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Ishikawa A, Hayasaka D, Nara K. Effects of root-colonizing fungi on pioneer Pinus thunbergii seedlings in primary successional volcanic mudflow on Kuchinoerabu Island, Japan. MYCORRHIZA 2024; 34:57-67. [PMID: 38502187 PMCID: PMC10998786 DOI: 10.1007/s00572-024-01142-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 03/07/2024] [Indexed: 03/21/2024]
Abstract
Root-colonizing fungi, such as mycorrhizal fungi and dark septate endophyte fungi, are often found on pioneer plant species during early primary succession. However, little is known about which fungal species are responsible for the establishment of pioneer plants when these symbionts colonize simultaneously. We investigated the root-colonizing fungal communities of Pinus thunbergii that established prior to lichens, bryophytes, and short-lived herbaceous plants in a primary successional volcanic mudflow site on Kuchinoerabu Island, Japan. We collected a total of 54 current-year and 1- to 2-year-old seedlings. The colonization of root fungi was evaluated by direct observation of key structures (e.g., mantle, arbuscule, microsclerotia, and hyphae) and molecular analysis. Of the 34 current-year seedlings collected, only 12 individuals were colonized by ectomycorrhizal (ECM) fungi. By contrast, all 1- to 2-year-old seedlings were colonized by ECM fungi. Seedlings colonized by pine-specific ECM fungi, specifically Rhizopogon roseolus and Suillus granulatus, showed higher nitrogen and phosphorus contents in their needles compared to non-ECM seedlings. Arbuscular mycorrhizal fungi and dark septate endophyte fungi were found in only two and three individuals, respectively. The high density of mycophagous deer on Kuchinoerabu-jima may contribute to the favored dispersal of ECM fungi over other root-colonizing fungi. In conclusion, the seedling establishment of P. thunbergii at the volcanic mudflow may be largely supported by ECM fungi, with negligible effects of arbuscular mycorrhizal fungi and dark septate endophytes.
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Affiliation(s)
- Akira Ishikawa
- Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, 277-0882, Chiba, Japan.
| | - Daisuke Hayasaka
- Faculty of Agriculture, Kindai University, 3327-204 Nakamachi, Nara, 631-8505, Nara, Japan
| | - Kazuhide Nara
- Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, 277-0882, Chiba, Japan
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Chaudhury R, Chakraborty A, Rahaman F, Sarkar T, Dey S, Das M. Mycorrhization in trees: ecology, physiology, emerging technologies and beyond. PLANT BIOLOGY (STUTTGART, GERMANY) 2024; 26:145-156. [PMID: 38194349 DOI: 10.1111/plb.13613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2023] [Accepted: 11/30/2023] [Indexed: 01/10/2024]
Abstract
Mycorrhization has been an integral part of plants since colonization by the early land plants. Over decades, substantial research has highlighted its potential role in improving nutritional efficiency and growth, development and survival of crop plants. However, the focus of this review is trees. Evidence have been provided to explain ecological and physiological significance of mycorrhization in trees. Advances in recent technologies (e.g., metagenomics, artificial intelligence, machine learning, agricultural drones) may open new windows to apply this knowledge in promoting tree growth in forest ecosystems. Dual mycorrhization relationships in trees and even triple relationships among trees, mycorrhizal fungi and bacteria offer an interesting physiological system to understand how plants interact with other organisms for better survival. Besides, studies indicate additional roles of mycorrhization in learning, memorizing and communication between host trees through a common mycorrhizal network (CMN). Recent observations in trees suggest that mycorrhization may even promote tolerance to multiple abiotic (e.g., drought, salt, heavy metal stress) and biotic (e.g. fungi) stresses. Due to the extent of physiological reliance, local adaptation of trees is heavily impacted by the mycorrhizal community. This knowledge opens the possibility of a non-GMO avenue to promote tree growth and development. Indeed, mycorrhization could impact growth of trees in nurserys and subsequent survival of the inoculated trees in field conditions. Future studies might integrate hyperspectral imaging and drone technologies to identify tree communities that are deficient in nitrogen and spray mycorrhizal spore formulations on them.
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Affiliation(s)
- R Chaudhury
- Department of Life Sciences, Presidency University, Kolkata, India
| | - A Chakraborty
- Department of Life Sciences, Presidency University, Kolkata, India
| | - F Rahaman
- Department of Life Sciences, Presidency University, Kolkata, India
| | - T Sarkar
- Department of Life Sciences, Presidency University, Kolkata, India
| | - S Dey
- Department of Life Sciences, Presidency University, Kolkata, India
| | - M Das
- Department of Life Sciences, Presidency University, Kolkata, India
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Liu Z, Fang J, He Y, Bending GD, Song B, Guo Y, Wang X, Fang Z, Adams JM. Distinct biogeographic patterns in Glomeromycotinian and Mucoromycotinian arbuscular mycorrhizal fungi across China: A meta-analysis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:168907. [PMID: 38061652 DOI: 10.1016/j.scitotenv.2023.168907] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 11/20/2023] [Accepted: 11/24/2023] [Indexed: 01/18/2024]
Abstract
Fine root endophytes, recently reclassified as Mucoromycotinian arbuscular mycorrhizal fungi (M-AMF), are now recognized as functionally important as Glomeromycotinian AMF (G-AMF). However, little is known about the biogeography and ecology of M-AMF and G-AMF communities, particularly on a large scale, preventing a systematic assessment of ecosystem diversity and functioning. Here, we investigated the biogeographic assemblies and ecological diversity patterns of both G-AMF and M-AMF, using published 18S rDNA amplicon datasets and associated metadata from 575 soil samples in six ecosystems across China. Contrasting with G-AMF, putative M-AMF were rare in natural/semi-natural sites, where their communities were a subset of those in agricultural sites characterized by intensive disturbances, suggesting different ecological niches that they could occupy. Spatial and environmental factors (e.g., vegetation type) significantly influenced both fungal communities, with soil total‑nitrogen and mean-annual-precipitation being the strongest predictors for G-AMF and M-AMF richness, respectively. Both groups exhibited a strong spatial distance-decay relationship, shaped more by environmental filtering than spatial effects for M-AMF, and the opposite for G-AMF, presumably because stochasticity (e.g., drift) dominantly structured G-AMF communities; while the narrower niche breadth (at community-level) of M-AMF compared to G-AMF suggested its more susceptibility to environmental differences. Furthermore, co-occurrence network links between G-AMF and M-AMF were prevalent across ecosystems, and were predicted to play a key role in stabilizing overall communities harboring both fungi. Based on the macroecological spatial scale datasets, this study provides solid evidence that the two AMF groups have distinct ecological preferences at the continental scale in China, and also highlights the potential impacts of anthropogenic activities on distributions of AMF. These results advance our knowledge of the ecological differences between the two fungal groups in terrestrial ecosystems, suggesting the need for further field-based investigation that may lead to a more sophisticated understanding of ecosystem function and sustainable management.
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Affiliation(s)
- Zihao Liu
- School of Geography and Ocean Science, Nanjing University, Nanjing 210008, China
| | - Jie Fang
- School of Geography and Ocean Science, Nanjing University, Nanjing 210008, China
| | - Yucheng He
- School of Geography and Ocean Science, Nanjing University, Nanjing 210008, China
| | - Gary D Bending
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK
| | - Bin Song
- School of Geography and Ocean Science, Nanjing University, Nanjing 210008, China; Department of Forest Sciences, University of Helsinki, PO Box 27, Latokartanonkaari 7, FI-00014 Helsinki, Finland.
| | - Yaping Guo
- School of Geography and Ocean Science, Nanjing University, Nanjing 210008, China
| | - Xiaojie Wang
- School of Life Sciences, Anhui University, Hefei 230601, China
| | - Zemin Fang
- School of Life Sciences, Anhui University, Hefei 230601, China
| | - Jonathan M Adams
- School of Geography and Ocean Science, Nanjing University, Nanjing 210008, China.
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Ganugi P, Caffi T, Gabrielli M, Secomandi E, Fiorini A, Zhang L, Bellotti G, Puglisi E, Fittipaldi MB, Asinari F, Tabaglio V, Trevisan M, Lucini L. A 3-year application of different mycorrhiza-based plant biostimulants distinctively modulates photosynthetic performance, leaf metabolism, and fruit quality in grapes ( Vitis vinifera L.). FRONTIERS IN PLANT SCIENCE 2023; 14:1236199. [PMID: 37711298 PMCID: PMC10497758 DOI: 10.3389/fpls.2023.1236199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Accepted: 07/27/2023] [Indexed: 09/16/2023]
Abstract
The use of microbial biostimulants in agriculture is recognized as a sustainable approach to promoting crop productivity and quality due to improved nutrient uptake, enhanced stress tolerance, and improved ability to cope with non-optimal environments. The present paper aimed to comparatively investigate the effect of seven different commercial mycorrhizal-based treatments in terms of yield, phytochemical components, and technological traits of Malvasia di Candia Aromatica grape (Vitis vinifera L.) plants. Metabolomic analysis and photosynthetic performance were first investigated in leaves to point out biochemical differences related to plant growth. Higher photosynthetic efficiency and better PSII functioning were found in biostimulant-treated vines, reflecting an overall decrease in photoinhibition compared to untreated plants. Untargeted metabolomics followed by multivariate statistics highlighted a robust reprogramming of primary (lipids) and secondary (alkaloids and terpenoids) metabolites in treated plants. The analysis of berry yield and chemical components exhibited significant differences depending on the biostimulant product. Generally, berries obtained from treated plants displayed improved contents of polyphenols and sugars, while yield remained unchanged. These results elucidated the significant role of microbial biostimulants in determining the quality of grape berries and eliciting biochemical changes in vines.
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Affiliation(s)
- Paola Ganugi
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Tito Caffi
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Mario Gabrielli
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Elena Secomandi
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
- Department of Sciences, Technologies and Society, University School for Advanced Studies, IUSS, Pavia, Italy
| | - Andrea Fiorini
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Leilei Zhang
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Gabriele Bellotti
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Edoardo Puglisi
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | | | - Florencia Asinari
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Vincenzo Tabaglio
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Marco Trevisan
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Luigi Lucini
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
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Corona Ramirez A, Bregnard D, Junier T, Cailleau G, Dorador C, Bindschedler S, Junier P. Assessment of fungal spores and spore-like diversity in environmental samples by targeted lysis. BMC Microbiol 2023; 23:68. [PMID: 36918804 PMCID: PMC10015814 DOI: 10.1186/s12866-023-02809-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 03/01/2023] [Indexed: 03/15/2023] Open
Abstract
At particular stages during their life cycles, fungi use multiple strategies to form specialized structures to survive unfavorable environmental conditions. These strategies encompass sporulation, as well as cell-wall melanization, multicellular tissue formation or even dimorphism. The resulting structures are not only used to disperse to other environments, but also to survive long periods of time awaiting favorable growth conditions. As a result, these specialized fungal structures are part of the microbial seed bank, which is known to influence the microbial community composition and contribute to the maintenance of diversity. Despite the importance of the microbial seed bank in the environment, methods to study the diversity of fungal structures with improved resistance only target spores dispersing in the air, omitting the high diversity of these structures in terms of morphology and environmental distribution. In this study, we applied a separation method based on cell lysis to enrich lysis-resistant fungal structures (for instance, spores, sclerotia, melanized yeast) to obtain a proxy of the composition of the fungal seed bank. This approach was first evaluated in-vitro in selected species. The results obtained showed that DNA from fungal spores and from yeast was only obtained after the application of the enrichment method, while mycelium was always lysed. After validation, we compared the diversity of the total and lysis-resistant fractions in the polyextreme environment of the Salar de Huasco, a high-altitude athalassohaline wetland in the Chilean Altiplano. Environmental samples were collected from the salt flat and from microbial mats in small surrounding ponds. Both the lake sediments and microbial mats were dominated by Ascomycota and Basidiomycota, however, the diversity and composition of each environment differed at lower taxonomic ranks. Members of the phylum Chytridiomycota were enriched in the lysis-resistant fraction, while members of the phylum Rozellomycota were never detected in this fraction. Moreover, we show that the community composition of the lysis-resistant fraction reflects the diversity of life cycles and survival strategies developed by fungi in the environment. To the best of our knowledge this is the first time that the fungal diversity is explored in the Salar de Huasco. In addition, the method presented here provides a simple and culture independent approach to assess the diversity of fungal lysis-resistant cells in the environment.
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Affiliation(s)
- Andrea Corona Ramirez
- Laboratory of Microbiology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - Danaé Bregnard
- Laboratory of Microbiology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - Thomas Junier
- Laboratory of Microbiology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
- Vital-IT Group, Swiss Institute of Bioinformatics, Lausanne, Switzerland
| | - Guillaume Cailleau
- Laboratory of Microbiology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - Cristina Dorador
- Department of Biotechnology, University of Antofagasta, Antofagasta, Chile
| | - Saskia Bindschedler
- Laboratory of Microbiology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - Pilar Junier
- Laboratory of Microbiology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland.
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Hu J, Vandenkoornhuyse P, Khalfallah F, Causse‐Védrines R, Mony C. Ecological corridors homogenize plant root endospheric mycobiota. THE NEW PHYTOLOGIST 2023; 237:1347-1362. [PMID: 36349407 PMCID: PMC10107361 DOI: 10.1111/nph.18606] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Accepted: 11/01/2022] [Indexed: 06/16/2023]
Abstract
Ecological corridors promote species coexistence in fragmented habitats where dispersal limits species fluxes. The corridor concept was developed and investigated with macroorganisms in mind, while microorganisms, the invisible majority of biodiversity, were disregarded. We analyzed the effect of corridors on the dynamics of endospheric fungal assemblages associated with plant roots at the scale of 1 m over 2 years (i.e. at five time points) by combining an experimental corridor-mesocosm with high-throughput amplicon sequencing. We showed that plant root endospheric mycobiota were sensitive to corridor effects when the corridors were set up at a small spatial scale. The endospheric mycobiota of connected plants had higher species richness, lower beta-diversity, and more deterministic assembly than the mycobiota of isolated plants. These effects became more pronounced with the development of host plants. Biotic corridors composed of host plants may thus play a key role in the spatial dynamics of microbial communities and may influence microbial diversity and related ecological functions.
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Affiliation(s)
- Jie Hu
- UMR 6553 EcobioCNRS‐University of RennesAvenue du Général Leclerc35042Rennes CedexFrance
- Ecology and Biodiversity group, Institute of Environmental BiologyUniversity of UtrechtH.R. Kruyt building, Padualaan 83584 CHUtrechtthe Netherlands
- Present address:
Department of Microbial EcologyNetherlands Institute of EcologyDroevendaalsesteeg 106708 PBWageningenthe Netherlands
| | | | - Fadwa Khalfallah
- UMR 6553 EcobioCNRS‐University of RennesAvenue du Général Leclerc35042Rennes CedexFrance
- UMR IAM, INRAEUniversité de LorraineRue d'amance54280ChampenouxFrance
| | - Romain Causse‐Védrines
- UMR 6553 EcobioCNRS‐University of RennesAvenue du Général Leclerc35042Rennes CedexFrance
| | - Cendrine Mony
- UMR 6553 EcobioCNRS‐University of RennesAvenue du Général Leclerc35042Rennes CedexFrance
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12
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Liu Z, Fang J, Song B, Yang Y, Yu Z, Hu J, Dong K, Takahashi K, Adams JM. Stochastic processes dominate soil arbuscular mycorrhizal fungal community assembly along an elevation gradient in central Japan. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 855:158941. [PMID: 36152859 DOI: 10.1016/j.scitotenv.2022.158941] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2022] [Revised: 09/18/2022] [Accepted: 09/18/2022] [Indexed: 06/16/2023]
Abstract
Arbuscular mycorrhizal (AM) fungi play an important role in facilitating ecosystem function and stability. Yet, their community response patterns and ecological assembly processes along elevational gradients which cross a range of climates and soil conditions remain elusive. We used Illumina MiSeq sequencing to examine trends in soil AM fungal community along an elevational gradient from 100 m to 2300 m in central Japan. A total of 750 operational taxonomic units (OTUs) affiliated to 12 AM fungal genera were identified from soil samples, and the AM fungal community composition differed strongly with elevation, with variance explained more by climate, followed by soil and plant factors. The AM fungal α-diversity, network connectivity and complexity between AM fungal taxa and also with plant communities all exhibited a maximum at the mid-elevation of 800 m and then declined, principally influenced by soil pH and precipitation. Stochastic processes dominated AM fungal community assembly across the whole elevation gradient, with homogenizing dispersal being the main process. Only when AM fungal communities were contrasted across a relatively broad range of elevations, did variable selection (deterministic process) became significant, and even then in a mixed role with stochasticity. While OTUs of AM fungi are clearly adapted to particular environmental ranges, stochasticity due to rapid dispersal has a major role in determining their occurrence, suggesting that AM fungi may possess generalized and interchangeable niches, and can adjust their distribution rapidly - at least on the scale of a single mountain. This finding emphasizes that the roles of AM fungi in plant ecology may be non-specific and easily substituted, and furthermore that there is rapid local scale dispersal, which may allow plants to maintain effective AM associations under environmental change.
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Affiliation(s)
- Zihao Liu
- School of Geography and Oceanography, Nanjing University, Nanjing, China
| | - Jie Fang
- School of Geography and Oceanography, Nanjing University, Nanjing, China
| | - Bin Song
- School of Geography and Oceanography, Nanjing University, Nanjing, China
| | - Ying Yang
- School of Geography and Oceanography, Nanjing University, Nanjing, China
| | - Zhi Yu
- Department of Integrative Biotechnology, Sungkyunkwan University, Suwon, South Korea
| | - Junli Hu
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China
| | - Ke Dong
- Life Science Major, Kyonggi University, Suwon, South Korea.
| | - Koichi Takahashi
- Department of Biological Sciences, Shinshu University, Matsumoto, Japan.
| | - Jonathan M Adams
- School of Geography and Oceanography, Nanjing University, Nanjing, China.
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13
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Tipton AG, Nelsen D, Koziol L, Duell EB, House G, Wilson GWT, Schultz PA, Bever JD. Arbuscular Mycorrhizal Fungi Taxa Show Variable Patterns of Micro-Scale Dispersal in Prairie Restorations. Front Microbiol 2022; 13:827293. [PMID: 35935243 PMCID: PMC9355535 DOI: 10.3389/fmicb.2022.827293] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Accepted: 06/23/2022] [Indexed: 11/18/2022] Open
Abstract
Human land use disturbance is a major contributor to the loss of natural plant communities, and this is particularly true in areas used for agriculture, such as the Midwestern tallgrass prairies of the United States. Previous work has shown that arbuscular mycorrhizal fungi (AMF) additions can increase native plant survival and success in plant community restorations, but the dispersal of AMF in these systems is poorly understood. In this study, we examined the dispersal of AMF taxa inoculated into four tallgrass prairie restorations. At each site, we inoculated native plant species with greenhouse-cultured native AMF taxa or whole soil collected from a nearby unplowed prairie. We monitored AMF dispersal, AMF biomass, plant growth, and plant community composition, at different distances from inoculation. In two sites, we assessed the role of plant hosts in dispersal, by placing known AMF hosts in a “bridge” and “island” pattern on either side of the inoculation points. We found that AMF taxa differ in their dispersal ability, with some taxa spreading to 2-m in the first year and others remaining closer to the inoculation point. We also found evidence that AMF spread altered non-inoculated neighboring plant growth and community composition in certain sites. These results represent the most comprehensive attempt to date to evaluate AMF spread.
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Affiliation(s)
- Alice G. Tipton
- Department of Biology, St. Louis University, St. Louis, MO, United States
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, United States
- *Correspondence: Alice G. Tipton
| | - Donald Nelsen
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, United States
| | - Liz Koziol
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, United States
| | - Eric B. Duell
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, United States
- Natural Resource Ecology and Management, Oklahoma State University, Stillwater, OK, United States
| | - Geoffrey House
- Department of Biology, Indiana University, Bloomington, IN, United States
- NEON, Boulder, CO, United States
| | - Gail W. T. Wilson
- Natural Resource Ecology and Management, Oklahoma State University, Stillwater, OK, United States
| | - Peggy A. Schultz
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, United States
- Environmental Studies Program, University of Kansas, Lawrence, KS, United States
| | - James D. Bever
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, United States
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, United States
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14
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Davison J, Vasar M, Sepp SK, Oja J, Al-Quraishy S, Bueno CG, Cantero JJ, Chimbioputo Fabiano E, Decocq G, Fraser L, Hiiesalu I, Hozzein WN, Koorem K, Moora M, Mucina L, Onipchenko V, Öpik M, Pärtel M, Phosri C, Semchenko M, Vahter T, Tedersoo L, Zobel M. Dominance, diversity, and niche breadth in arbuscular mycorrhizal fungal communities. Ecology 2022; 103:e3761. [PMID: 35582944 DOI: 10.1002/ecy.3761] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 03/28/2022] [Accepted: 03/29/2022] [Indexed: 11/08/2022]
Abstract
Classical theory identifies resource competition as the major structuring force of biotic communities and predicts that: (i) levels of dominance and richness in communities are inversely related, (ii) narrow niches allow dense 'packing' in niche space and thus promote diversity, and (iii) dominants are generalists with wide niches, such that locally abundant taxa also exhibit wide distributions. Current empirical support, however, is mixed. We tested these expectations using published data on arbuscular mycorrhizal (AM) fungal community composition worldwide. We recorded the expected negative relationship between dominance and richness and, to a degree, the positive association between local and global dominance. However, contrary to expectation, dominance was pronounced in communities where more specialists were present; and, conversely, richness was higher in communites with more generalists. Thus, resource competition and niche packing appear of limited importance in AM fungal community assembly; rather patterns of dominance and diversity seem more consistent with habitat filtering and stochastic processes. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- John Davison
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Martti Vasar
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Siim-Kaarel Sepp
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Jane Oja
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Saleh Al-Quraishy
- Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - C Guillermo Bueno
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Juan José Cantero
- Universidad Nacional de Córdoba, Instituto Multidisciplinario de Biología Vegetal, CONICET, Córdoba, Argentina.,Universidad Nacional de Río Cuarto, Departamento de Biología Agrícola, Facultad de Agronomía y Veterinaria, Córdoba, Argentina
| | | | - Guillaume Decocq
- Ecologie et Dynamique des Systèmes Anthropisés (EDYSAN, UMR CNRS 7058), Jules Verne University of Picardie, Amiens, France
| | - Lauchlan Fraser
- Department of Natural Resource Sciences, Thompson Rivers University, Kamloops, British Columbia, Canada
| | - Inga Hiiesalu
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Wael N Hozzein
- Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia.,Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt
| | - Kadri Koorem
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Mari Moora
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Ladislav Mucina
- Iluka Chair in Vegetation Science and Biogeography, Harry Butler Institute, Murdoch University, Murdoch, Perth, Australia.,Department of Geography & Environmental Studies, Stellenbosch University, Stellenbosch, South Africa
| | - Vladimir Onipchenko
- Department of Ecology and Plant Geography, Faculty of Biology, Moscow Lomonosov State University, Moscow, Russia
| | - Maarja Öpik
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Meelis Pärtel
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Cherdchai Phosri
- Department of Biology, Nakhon Phanom University, Nakhon Phanom, Thailand
| | - Marina Semchenko
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia.,School of Earth and Environmental Sciences, University of Manchester, Manchester, UK
| | - Tanel Vahter
- Institute of Ecology and Earth Sciences, University of Tartu, Estonia
| | - Leho Tedersoo
- Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia.,Mycology and Microbiology Center, University of Tartu, Tartu, Estonia
| | - Martin Zobel
- Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia.,Department of Botany, University of Tartu, Tartu, Estonia
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15
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Custer GF, Bresciani L, Dini-Andreote F. Ecological and Evolutionary Implications of Microbial Dispersal. Front Microbiol 2022; 13:855859. [PMID: 35464980 PMCID: PMC9019484 DOI: 10.3389/fmicb.2022.855859] [Citation(s) in RCA: 31] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2022] [Accepted: 03/14/2022] [Indexed: 12/04/2022] Open
Abstract
Dispersal is simply defined as the movement of species across space and time. Despite this terse definition, dispersal is an essential process with direct ecological and evolutionary implications that modulate community assembly and turnover. Seminal ecological studies have shown that environmental context (e.g., local edaphic properties, resident community), dispersal timing and frequency, and species traits, collectively account for patterns of species distribution resulting in either their persistence or unsuccessful establishment within local communities. Despite the key importance of this process, relatively little is known about how dispersal operates in microbiomes across divergent systems and community types. Here, we discuss parallels of macro- and micro-organismal ecology with a focus on idiosyncrasies that may lead to novel mechanisms by which dispersal affects the structure and function of microbiomes. Within the context of ecological implications, we revise the importance of short- and long-distance microbial dispersal through active and passive mechanisms, species traits, and community coalescence, and how these align with recent advances in metacommunity theory. Conversely, we enumerate how microbial dispersal can affect diversification rates of species by promoting gene influxes within local communities and/or shifting genes and allele frequencies via migration or de novo changes (e.g., horizontal gene transfer). Finally, we synthesize how observed microbial assemblages are the dynamic outcome of both successful and unsuccessful dispersal events of taxa and discuss these concepts in line with the literature, thus enabling a richer appreciation of this process in microbiome research.
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Affiliation(s)
| | | | - Francisco Dini-Andreote
- Department of Plant Science and Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, United States
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16
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Does Commercial Inoculation Promote Arbuscular Mycorrhizal Fungi Invasion? Microorganisms 2022; 10:microorganisms10020404. [PMID: 35208858 PMCID: PMC8879836 DOI: 10.3390/microorganisms10020404] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2022] [Revised: 02/06/2022] [Accepted: 02/06/2022] [Indexed: 01/27/2023] Open
Abstract
Interventions with commercial inoculants have the potential to reduce the environmental footprint of agriculture, but their indiscriminate deployment has raised questions on the unintended consequences of microbial invasion. In the absence of explicit empirical reports on arbuscular mycorrhizal fungi (AMF) invasion, we examine the present framework used to define AMF invasion and offer perspectives on the steps needed to avoid the negative impacts of AMF invasion. Although commercial AMF isolates are potential invaders, invasions do not always constitute negative impacts on native community diversity and functions. Instead, the fates of the invading and resident communities are determined by ecological processes such as selection, drift, dispersal, and speciation. Nevertheless, we recommend strategies that reduce overdependence on introduced inoculants, such as adoption management practices that promote the diversity and richness of indigenous AMF communities, and the development of native propagules as a supplement to commercial AMF in applicable areas. Policies and regulations that monitor inoculant value chains from production to application must be put in place to check inoculant quality and composition, as well as the transport of inoculants between geographically distant regions.
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17
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Thanni B, Merckx R, De Bauw P, Boeraeve M, Peeters G, Hauser S, Honnay O. Spatial variability and environmental drivers of cassava-arbuscular mycorrhiza fungi (AMF) associations across Southern Nigeria. MYCORRHIZA 2022; 32:1-13. [PMID: 34981190 PMCID: PMC8786768 DOI: 10.1007/s00572-021-01058-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 11/16/2021] [Indexed: 06/14/2023]
Abstract
Cassava, forming starch-rich, tuberous roots, is an important staple crop in smallholder farming systems in sub-Saharan Africa. Its relatively good tolerance to drought and nutrient-poor soils may be partly attributed to the crop's association with arbuscular mycorrhiza fungi (AMF). Yet insights into AMF-community composition and richness of cassava, and knowledge of its environmental drivers are still limited. Here, we sampled 60 cassava fields across three major cassava-growing agro-ecological zones in Nigeria and used a DNA meta-barcoding approach to quantify large-scale spatial variation and evaluate the effects of soil characteristics and common agricultural practices on AMF community composition, richness and Shannon diversity. We identified 515 AMF operational taxonomic units (OTUs), dominated by Glomus, with large variation across agro-ecological zones, and with soil pH explaining most of the variation in AMF community composition. High levels of soil available phosphorus reduced OTU richness without affecting Shannon diversity. Long fallow periods (> 5 years) reduced AMF richness compared with short fallows, whereas both zero tillage and tractor tillage reduced AMF diversity compared with hoe tillage. This study reveals that the symbiotic relationship between cassava and AMF is strongly influenced by soil characteristics and agricultural management and that it is possible to adjust cassava cultivation practices to modify AMF diversity and community structure.
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Affiliation(s)
- Bolaji Thanni
- Division Soil and Water Management, Department of Earth and Environmental Sciences, KU Leuven, Kasteelpark Arenberg 20, box-3001, 3001, Heverlee, Leuven, Belgium.
- Root and Tuber Agronomy, International Institute of Tropical Agriculture, Ibadan, Nigeria.
| | - Roel Merckx
- Division Soil and Water Management, Department of Earth and Environmental Sciences, KU Leuven, Kasteelpark Arenberg 20, box-3001, 3001, Heverlee, Leuven, Belgium
| | - Pieterjan De Bauw
- Division Soil and Water Management, Department of Earth and Environmental Sciences, KU Leuven, Kasteelpark Arenberg 20, box-3001, 3001, Heverlee, Leuven, Belgium
| | - Margaux Boeraeve
- Department of Biology, Plant Conservation and Population Biology, KU Leuven, B-3001, Leuven, Belgium
| | - Gerrit Peeters
- Department of Biology, Plant Conservation and Population Biology, KU Leuven, B-3001, Leuven, Belgium
| | - Stefan Hauser
- Root and Tuber Agronomy, International Institute of Tropical Agriculture, Ibadan, Nigeria
| | - Olivier Honnay
- Department of Biology, Plant Conservation and Population Biology, KU Leuven, B-3001, Leuven, Belgium
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18
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Arbuscular Mycorrhizal Fungi in the Colombian Amazon: A Historical Review. Fungal Biol 2022. [DOI: 10.1007/978-3-031-12994-0_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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19
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Madejón P, Navarro-Fernández CM, Madejón E, López-García Á, Marañón T. Plant response to mycorrhizal inoculation and amendments on a contaminated soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 789:147943. [PMID: 34058592 DOI: 10.1016/j.scitotenv.2021.147943] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Revised: 05/07/2021] [Accepted: 05/18/2021] [Indexed: 06/12/2023]
Abstract
Understanding the combined effects of soil amendments and inoculation of mycorrhizal fungi on the response of different plant species during the phytostabilization process of trace elements contaminated soils is a challenge. This task is more difficult but more realistic when studied under field conditions. We assess the combined effects of two amendment doses and mycorrhizal inoculation on the response of saplings of two tree species planted in a contaminated field. The amendments were a mix of sugar beet lime and biosolid compost. The inoculation treatments were made with a commercial inoculum of arbuscular mycorrhizal fungi for wild olive and ectomycorrhizal fungi for stone pine. Results showed a weak or null effect of the mycorrhizal inoculation on plant growth, survival and trace element accumulation. There was a significant increase on P nutrition for stone pine, growing on non-amended conditions. Soil amendments were very effective reducing trace elements availability and their accumulation in both plant species, especially in roots. However, the effects on plant biomass were species-dependent and contrasted; low-dose amendments increased the biomass of wild olive by 33.3%, but reduced by 28% that of pine. The high doses of amendments (60 T ha-1) produced some negative effects on plant growth and nutrition, probably related to the increase of soil salinity. Both plant species, stone pine and wild olive, have been proved to be adequate for phytostabilization of contaminated soils under Mediterranean climate, due to their drought tolerance and the low transfer of trace elements from root to shoot, thus reducing toxicity for the food web. To implement microbial-assisted phytoremediation approaches, a better understanding of the diversity and ecology of plant-associated microorganisms is needed. The use of indigenous fungi, locally adapted and tolerant to contamination, would be more suitable for phytostabilization purposes.
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Affiliation(s)
- Paula Madejón
- IRNAS, CSIC, Avenida Reina Mercedes 10, 41012 Seville, Spain.
| | | | | | - Álvaro López-García
- Estación Experimental del Zaidín (EEZ), CSIC, Dept. Soil Microbiology and Symbiotic Systems, Profesor Albareda 1, 18008 Granada, Spain; Universidad de Jaén, Dept. Animal Biology, Plant Biology and Ecology, Campus Las Lagunillas, s/n. 23071 Jaén, Spain; Instituto Interuniversitario de Investigación del Sistema Tierra en Andalucía (IISTA), Av. del Mediterráneo, S/N, 18006 Granada, Spain
| | - Teodoro Marañón
- IRNAS, CSIC, Avenida Reina Mercedes 10, 41012 Seville, Spain
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20
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Arbuscular Mycorrhizal Fungal Communities in the Soils of Desert Habitats. Microorganisms 2021; 9:microorganisms9020229. [PMID: 33499315 PMCID: PMC7912695 DOI: 10.3390/microorganisms9020229] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 01/15/2021] [Accepted: 01/19/2021] [Indexed: 12/25/2022] Open
Abstract
Deserts cover a significant proportion of the Earth’s surface and continue to expand as a consequence of climate change. Mutualistic arbuscular mycorrhizal (AM) fungi are functionally important plant root symbionts, and may be particularly important in drought stressed systems such as deserts. Here we provide a first molecular characterization of the AM fungi occurring in several desert ecosystems worldwide. We sequenced AM fungal DNA from soil samples collected from deserts in six different regions of the globe using the primer pair WANDA-AML2 with Illumina MiSeq. We recorded altogether 50 AM fungal phylotypes. Glomeraceae was the most common family, while Claroideoglomeraceae, Diversisporaceae and Acaulosporaceae were represented with lower frequency and abundance. The most diverse site, with 35 virtual taxa (VT), was in the Israeli Negev desert. Sites representing harsh conditions yielded relatively few reads and low richness estimates, for example, a Saudi Arabian desert site where only three Diversispora VT were recorded. The AM fungal taxa recorded in the desert soils are mostly geographically and ecologically widespread. However, in four sites out of six, communities comprised more desert-affiliated taxa (according to the MaarjAM database) than expected at random. AM fungal VT present in samples were phylogenetically clustered compared with the global taxon pool, suggesting that nonrandom assembly processes, notably habitat filtering, may have shaped desert fungal assemblages.
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