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Mojica KDA, Brussaard CPD. Viruses of Plankton: On the Edge of the Viral Frontier. Microorganisms 2023; 12:31. [PMID: 38257858 PMCID: PMC10819161 DOI: 10.3390/microorganisms12010031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 12/14/2023] [Indexed: 01/24/2024] Open
Abstract
The field of aquatic viral ecology has continued to evolve rapidly over the last three decades [...].
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Affiliation(s)
- Kristina D. A. Mojica
- Division of Marine Science, School of Ocean Science and Engineering, The University of Southern Mississippi, Stennis Space Center, Hancock County, MS 39529, USA
| | - Corina P. D. Brussaard
- Department of Marine Microbiology and Biogeochemistry, NIOZ—Royal Netherlands Institute for Sea Research, 1790 AB Den Burg, The Netherlands;
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, 1000 GG Amsterdam, The Netherlands
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2
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Ho HVN, Dunigan DD, Salsbery ME, Agarkova IV, Al Ameeli Z, Van Etten JL, DeLong JP. Viral Chemotaxis of Paramecium Bursaria Altered by Algal Endosymbionts. MICROBIAL ECOLOGY 2023; 86:2904-2909. [PMID: 37650927 DOI: 10.1007/s00248-023-02292-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Accepted: 08/23/2023] [Indexed: 09/01/2023]
Abstract
Chemotaxis is widespread across many taxa and often aids resource acquisition or predator avoidance. Species interactions can modify the degree of movement facilitated by chemotaxis. In this study, we investigated the influence of symbionts on Paramecium bursaria's chemotactic behavior toward chloroviruses. To achieve this, we performed choice experiments using chlorovirus and control candidate attractors (virus stabilization buffer and pond water). We quantified the movement of Paramecia grown with or without algal and viral symbionts toward each attractor. All Paramecia showed some chemotaxis toward viruses, but cells without algae and viruses showed the most movement toward viruses. Thus, the endosymbiotic algae (zoochlorellae) appeared to alter the movement of Paramecia toward chloroviruses, but it was not clear that ectosymbiotic viruses (chlorovirus) also had this effect. The change in behavior was consistent with a change in swimming speed, but a change in attraction remains possible. The potential costs and benefits of chemotactic movement toward chloroviruses for either the Paramecia hosts or its symbionts remain unclear.
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Affiliation(s)
- Huy V N Ho
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE, 68588-2083, USA
| | - David D Dunigan
- Department of Plant Pathology, University of Nebraska-Lincoln, Lincoln, NE, 68583-0722, USA
- Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, NE, 68583-0900, USA
| | - Miranda E Salsbery
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE, 68588-2083, USA
| | - Irina V Agarkova
- Department of Plant Pathology, University of Nebraska-Lincoln, Lincoln, NE, 68583-0722, USA
- Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, NE, 68583-0900, USA
| | - Zeina Al Ameeli
- Department of Plant Pathology, University of Nebraska-Lincoln, Lincoln, NE, 68583-0722, USA
- Medical Technical Institutes, Middle Technical University, Baghdad, Iraq
| | - James L Van Etten
- Department of Plant Pathology, University of Nebraska-Lincoln, Lincoln, NE, 68583-0722, USA
- Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, NE, 68583-0900, USA
| | - John P DeLong
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE, 68588-2083, USA.
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Oluwarinde BO, Ajose DJ, Abolarinwa TO, Montso PK, Du Preez I, Njom HA, Ateba CN. Safety Properties of Escherichia coli O157:H7 Specific Bacteriophages: Recent Advances for Food Safety. Foods 2023; 12:3989. [PMID: 37959107 PMCID: PMC10650914 DOI: 10.3390/foods12213989] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 10/23/2023] [Accepted: 10/26/2023] [Indexed: 11/15/2023] Open
Abstract
Shiga-toxin-producing Escherichia coli (STEC) is typically detected on food products mainly due to cross-contamination with faecal matter. The serotype O157:H7 has been of major public health concern due to the severity of illness caused, prevalence, and management. In the food chain, the main methods of controlling contamination by foodborne pathogens often involve the application of antimicrobial agents, which are now becoming less efficient. There is a growing need for the development of new approaches to combat these pathogens, especially those that harbour antimicrobial resistant and virulent determinants. Strategies to also limit their presence on food contact surfaces and food matrices are needed to prevent their transmission. Recent studies have revealed that bacteriophages are useful non-antibiotic options for biocontrol of E. coli O157:H7 in both animals and humans. Phage biocontrol can significantly reduce E. coli O157:H7, thereby improving food safety. However, before being certified as potential biocontrol agents, the safety of the phage candidates must be resolved to satisfy regulatory standards, particularly regarding phage resistance, antigenic properties, and toxigenic properties. In this review, we provide a general description of the main virulence elements of E. coli O157:H7 and present detailed reports that support the proposals that phages infecting E. coli O157:H7 are potential biocontrol agents. This paper also outlines the mechanism of E. coli O157:H7 resistance to phages and the safety concerns associated with the use of phages as a biocontrol.
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Affiliation(s)
- Bukola Opeyemi Oluwarinde
- Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Mahikeng 2375, South Africa; (B.O.O.); (D.J.A.); (T.O.A.); (P.K.M.)
- Antimicrobial Resistance and Phage Bio-Control Research Group (AREPHABREG), Department of Microbiology, North-West University, Mahikeng 2735, South Africa
| | - Daniel Jesuwenu Ajose
- Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Mahikeng 2375, South Africa; (B.O.O.); (D.J.A.); (T.O.A.); (P.K.M.)
- Antimicrobial Resistance and Phage Bio-Control Research Group (AREPHABREG), Department of Microbiology, North-West University, Mahikeng 2735, South Africa
| | - Tesleem Olatunde Abolarinwa
- Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Mahikeng 2375, South Africa; (B.O.O.); (D.J.A.); (T.O.A.); (P.K.M.)
- Antimicrobial Resistance and Phage Bio-Control Research Group (AREPHABREG), Department of Microbiology, North-West University, Mahikeng 2735, South Africa
| | - Peter Kotsoana Montso
- Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Mahikeng 2375, South Africa; (B.O.O.); (D.J.A.); (T.O.A.); (P.K.M.)
- Antimicrobial Resistance and Phage Bio-Control Research Group (AREPHABREG), Department of Microbiology, North-West University, Mahikeng 2735, South Africa
| | - Ilse Du Preez
- Centre for Human Metabolomics, North-West University, Potchefstroom 2531, South Africa;
| | - Henry Akum Njom
- Agricultural Research Council, Private Bag X1251, Potchefstroom 2531, South Africa;
| | - Collins Njie Ateba
- Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Mahikeng 2375, South Africa; (B.O.O.); (D.J.A.); (T.O.A.); (P.K.M.)
- Antimicrobial Resistance and Phage Bio-Control Research Group (AREPHABREG), Department of Microbiology, North-West University, Mahikeng 2735, South Africa
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Li H, Xu Y, Wang Y, Cui Y, Lin J, Zhou Y, Tang S, Zhang Y, Hao H, Nie Z, Wang X, Tang R. Material-engineered bioartificial microorganisms enabling efficient scavenging of waterborne viruses. Nat Commun 2023; 14:4658. [PMID: 37537158 PMCID: PMC10400550 DOI: 10.1038/s41467-023-40397-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 07/26/2023] [Indexed: 08/05/2023] Open
Abstract
Material-based tactics have attracted extensive attention in driving the functional evolution of organisms. In aiming to design steerable bioartificial organisms to scavenge pathogenic waterborne viruses, we engineer Paramecium caudatum (Para), single-celled microorganisms, with a semiartificial and specific virus-scavenging organelle (VSO). Fe3O4 magnetic nanoparticles modified with a virus-capture antibody (MNPs@Ab) are integrated into the vacuoles of Para during feeding to produce VSOs, which persist inside Para without impairing their swimming ability. Compared with natural Para, which has no capture specificity and shows inefficient inactivation, the VSO-engineered Para (E-Para) specifically gathers waterborne viruses and confines them inside the VSOs, where the captured viruses are completely deactivated because the peroxidase-like nano-Fe3O4 produces virus-killing hydroxyl radicals (•OH) within acidic environment of VSO. After treatment, magnetized E-Para is readily recycled and reused, avoiding further contamination. Materials-based artificial organelles convert natural Para into a living virus scavenger, facilitating waterborne virus clearance without extra energy consumption.
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Affiliation(s)
- Huixin Li
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China
- Department of Cardiology, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, Zhejiang, China
- Key Laboratory of Cardiovascular Intervention and Regenerative Medicine of Zhejiang Province, Hangzhou, Zhejiang, China
| | - Yanpeng Xu
- Laboratory of Virology, Beijing Key Laboratory of Etiology of Viral Diseases in Children, Capital Institute of Pediatrics, Beijing, China
| | - Yang Wang
- School of Chemistry and Chemical Engineering, Nantong University, Nantong, Jiangsu, China
| | - Yihao Cui
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China
| | - Jiake Lin
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China
| | - Yuemin Zhou
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China
| | - Shuling Tang
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China
| | - Ying Zhang
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China
- Department of Cardiology, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, Zhejiang, China
- Key Laboratory of Cardiovascular Intervention and Regenerative Medicine of Zhejiang Province, Hangzhou, Zhejiang, China
| | - Haibin Hao
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China
- Department of Cardiology, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, Zhejiang, China
| | - Zihao Nie
- Department of Cardiology, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, Zhejiang, China
- Key Laboratory of Cardiovascular Intervention and Regenerative Medicine of Zhejiang Province, Hangzhou, Zhejiang, China
| | - Xiaoyu Wang
- Department of Cardiology, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China.
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, Zhejiang, China.
- Key Laboratory of Cardiovascular Intervention and Regenerative Medicine of Zhejiang Province, Hangzhou, Zhejiang, China.
| | - Ruikang Tang
- Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China.
- Department of Cardiology, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China.
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, Zhejiang, China.
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DeLong JP, Van Etten JL, Dunigan DD. Lessons from Chloroviruses: the Complex and Diverse Roles of Viruses in Food Webs. J Virol 2023; 97:e0027523. [PMID: 37133447 PMCID: PMC10231191 DOI: 10.1128/jvi.00275-23] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/04/2023] Open
Abstract
Viruses can have large effects on the ecological communities in which they occur. Much of this impact comes from the mortality of host cells, which simultaneously alters microbial community composition and causes the release of matter that can be used by other organisms. However, recent studies indicate that viruses may be even more deeply integrated into the functioning of ecological communities than their effect on nutrient cycling suggests. In particular, chloroviruses, which infect chlorella-like green algae that typically occur as endosymbionts, participate in three types of interactions with other species. Chlororviruses (i) can lure ciliates from a distance, using them as a vector; (ii) depend on predators for access to their hosts; and (iii) get consumed as a food source by, at least, a variety of protists. Therefore, chloroviruses both depend on and influence the spatial structures of communities as well as the flows of energy through those communities, driven by predator-prey interactions. The emergence of these interactions are an eco-evolutionary puzzle, given the interdependence of these species and the many costs and benefits that these interactions generate.
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Affiliation(s)
- John P. DeLong
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
| | - James L. Van Etten
- Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- Department of Plant Pathology, University of Nebraska-Lincoln, Lincoln Nebraska, USA
| | - David D. Dunigan
- Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- Department of Plant Pathology, University of Nebraska-Lincoln, Lincoln Nebraska, USA
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