Diffusion NMR study of complex formation in membrane-associated peptides

Tuning the Surface Ordering of Self-Assembled Ionic Surfactants on Semiconducting Single-Walled Carbon Nanotubes: Concentration, Tube Diameter, and Counterions

We report direct spectroscopic measurements of the macromolecular organization of ionic surfactants on the surface of semiconducting single-walled carbon nanotubes (SWCNTs) within solution-processed thin films. By using vibrational sum frequency generation (VSFG) spectroscopy, sensitive measurements of interfacial surfactant ordering were obtained as a function of surfactant concentration for sodium dodecyl sulfate (SDS)-encapsulated (6,5) and (7,6) SWCNTs with and without excess electrolytes. Anionic surfactants are known to effectively stabilize SWCNTs. The current models suggest a strong influence of the dispersion conditions on the surfactant interfacial macromolecular organization and self-assembly. Direct experimental probes of such an organization using nanotubes of specific chirality are needed to validate the existing models. We found that as the bulk SDS concentration increases near the surfactant critical micelle concentration, the interfacial ordering increased, approaching the formation of cylindrical-like micelles with the nanotube at the core. At the higher surfactant concentrations measured here, the (6,5) SWCNTs produced more ordered structures relative to those with the (7,6) SWCNTs. The relatively larger-diameter (7,6) chiral tubes support enhanced van der Waals (vdW) interactions between the tube carbon surface and the surfactant methylene chain groups that likely increase the density of gauche defects. A new effect arises when the precursor solution is exposed to a small concentration of divalent Ca²⁺ counterions. We postulate that a salt-bridging configuration on such highly curved surfaces decreases the ordering of interfacial surfactant molecules, resulting in compact, disordered structures. However, this phenomenon was not observed with excess Na⁺ ions at the same ionic strength. Instead, a modest increase in surfactant ordering was observed with the excess monovalent electrolyte. These results provide new insights for thin film solution processing of vdW nanomaterials and demonstrate that VSFG is a sensitive probe of surfactant organization on nanostructures.

The influence of N-terminal acetylation on micelle-induced conformational changes and aggregation of α-Synuclein

The biological function of α-Synuclein has been related to binding to lipids and membranes but these interactions can also mediate α-Synuclein aggregation, which is associated to Parkinson’s disease and other neuropathologies. In brain tissue α-Synuclein is constitutively N-acetylated, a modification that plays an important role in its conformational propensity, lipid and membrane binding, and aggregation propensity. We studied the interactions of the lipid-mimetic SDS with N-acetylated and non-acetylated α-Synuclein, as well as their early-onset Parkinson’s disease variants A30P, E46K and A53T. At low SDS/protein ratios α-Synuclein forms oligomeric complexes with SDS micelles with relatively low α-helical structure. These micellar oligomers can efficiently nucleate aggregation of monomeric α-Synuclein, with successive formation of oligomers, protofibrils, curly fibrils and mature amyloid fibrils. N-acetylation reduces considerably the rate of aggregation of WT α-Synuclein. However, in presence of any of the early-onset Parkinson’s disease mutations the protective effect of N-acetylation against micelle-induced aggregation becomes impaired. At higher SDS/protein ratios, N-acetylation favors another conformational transition, in which a second type of α-helix-rich, non-aggregating oligomers become stabilized. Once again, the Parkinson’s disease mutations disconnect the influence of N-acetylation in promoting this transition. These results suggest a cooperative link between the N-terminus and the region of the mutations that may be important for α-Synuclein function.

Strongly Bound Sodium Dodecyl Sulfate Surrounding Single-Wall Carbon Nanotubes

NMR techniques have been widely used to infer molecular structure, including surfactant aggregation. A combination of optical spectroscopy, proton NMR spectroscopy, and pulsed field gradient NMR (PFG NMR) is used to study the adsorption number for sodium dodecyl sulfate (SDS) with single-wall carbon nanotubes (SWCNTs). Distinct transitions in the NMR chemical shift of SDS are observed in the presence of SWCNTs. These transitions demonstrate that micelle formation is delayed by SWCNTs due to the adsorption of SDS on the nanotube surface. Once the nanotube surface is saturated, the free SDS concentration increases until micelle formation is observed. Therefore, the adsorption number of SDS on SWCNTs can be determined by the changes to the apparent critical micelle concentration (CMC). PFG NMR found that SDS remains strongly bound onto the nanotube. Quantitative analysis of the diffusivity of SDS allowed calculation of the adsorption number of strongly bound SDS on SWCNTs. The adsorption numbers from these techniques give the same values within experimental error, indicating that a significant fraction of the SDS interacting with nanotubes remains strongly bound for as long as 0.5 s, which is the maximum diffusion time used in the PFG NMR measurements.

Diffusion NMR studies of macromolecular complex formation, crowding and confinement in soft materials

Label-free methods to obtain hydrodynamic size from diffusion measurements are desirable in environments that contain multiple macromolecular species at a high total concentration: one example is the crowded cellular environment. In complex, multi-species macromolecular environments - in this article, we feature aqueous systems involving polymers, surfactants and proteins - the link between dynamics and size is harder to unpack due to macromolecular crowding and confinement. In this review, we demonstrate that the pulsed-field gradient NMR technique, with its spectral separation of different chemical components, is ideal for studying the dynamics of the entire system simultaneously and without labelling, in a wide range of systems. The simultaneous measurement of the dynamics of multiple components allows for internal consistency checks and enables quantitative statements about the link between macromolecular dynamics, size, complex formation and crowding in soft materials.