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Yanagui K, Camargo ELO, Abreu LGFD, Nagamatsu ST, Fiamenghi MB, Silva NV, Carazzolle MF, Nascimento LC, Franco SF, Bressiani JA, Mieczkowski PA, Grassi MCB, Pereira GAG. Internode elongation in energy cane shows remarkable clues on lignocellulosic biomass biosynthesis in Saccharum hybrids. Gene 2022; 828:146476. [PMID: 35413393 DOI: 10.1016/j.gene.2022.146476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Revised: 03/17/2022] [Accepted: 03/31/2022] [Indexed: 11/17/2022]
Abstract
Energy cane is a dedicated crop to high biomass production and selected during Saccharum breeding programs to fit specific industrial needs for 2G bioethanol production. Internode elongation is one of the most important characteristics in Saccharum hybrids due to its relationship with crop yield. In this study, we selected the third internode elongation of the energy cane. To characterize this process, we divided the internode into five sections and performed a detailed transcriptome analysis (RNA-Seq) and cell wall characterization. The histological analyses revealed a remarkable gradient that spans from cell division and protoxylem lignification to the internode maturation and complete vascular bundle lignification. RNA-Seq analysis revealed more than 11,000 differentially expressed genes between the sections internal. Gene ontology analyzes showed enriched categories in each section, as well as the most expressed genes in each section, presented different biological processes. We found that the internode elongation and division zones have a large number of unique genes. Evaluated the specific profile of genes related to primary and secondary cell wall formation, cellulose synthesis, hemicellulose, lignin, and growth-related genes. For each section these genes presented different profiles along the internode in elongation in energy cane. The results of this study provide an overview of the regulation of gene expression of an internode elongation in energy cane. Gene expression analysis revealed promising candidates for transcriptional regulation of energy cane lignification and evidence key genes for the regulation of internode development, which can serve as a basis for understanding the molecular regulatory mechanisms that support the growth and development of plants in the Saccahrum complex.
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Affiliation(s)
- Karina Yanagui
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Eduardo L O Camargo
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Luís Guilherme F de Abreu
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Sheila T Nagamatsu
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Mateus B Fiamenghi
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Nicholas V Silva
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Marcelo F Carazzolle
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Leandro C Nascimento
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - Sulamita F Franco
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil
| | - José A Bressiani
- GranBio Investimentos SA, AV. Brigadeiro Faria Lima, 2777, cj. 1503, Alto de Pinheiros, São Paulo 01452-000, SP, Brazil
| | - Piotr A Mieczkowski
- Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
| | - Maria Carolina B Grassi
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil; Roundtable on Sustainable Biomaterials (RSB), Impact Hub Geneva, Rue Fendt 1, 1201, Geneva, Switzerland
| | - Gonçalo Amarante G Pereira
- Laboratory of Genomics and BioEnergy (LGE), Institute of Biology, Department of Genetics, Evolution, and Bioagents, Campinas State University (UNICAMP), 13083-864 Campinas, SP, Brazil.
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Khan S, Naushad M, Lima EC, Zhang S, Shaheen SM, Rinklebe J. Global soil pollution by toxic elements: Current status and future perspectives on the risk assessment and remediation strategies - A review. JOURNAL OF HAZARDOUS MATERIALS 2021; 417:126039. [PMID: 34015708 DOI: 10.1016/j.jhazmat.2021.126039] [Citation(s) in RCA: 130] [Impact Index Per Article: 43.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Revised: 04/10/2021] [Accepted: 04/28/2021] [Indexed: 05/24/2023]
Abstract
The aim of this article is to review and present the state of the arte about the status of toxic elements (TEs) in soils and assess the potential risk using single and total complex pollution indices in a global scale. We compiled, integrated, and analyzed soil TE pollution data over almost a decade through key maps, which have not been reviewed up to date. All the in-situ and ex-situ remediation treatments have been also reviewed, illustrated, and compared, for the first time. The future perspectives have been discussed and summarized. This review demonstrates that the cornerstone maps and integrated information provide reliable geographical coordinates and inclusive information on TEs pollution, particularly in China. In-situ treatment approaches for TEs polluted soils are more cost-effective and applicable than ex-situ treatment trials. Selecting a feasible remediation strategy should to take the extent of contamination, treatment objectives, site characteristics, cost-efficiency, and public suitability into account. The summarized findings in this review may help to develop innovative and applicable methods for assessing the global soil pollution by TEs. Also, these findings may help to develop innovative, applicable, and feasibly economic methods for sustainable management of TEs contaminated soils to mitigate the environmental and human health risk.
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Affiliation(s)
- Shamshad Khan
- School of Geography and Resources Science, Neijiang Normal University, Neijiang 641100, China.
| | - Mu Naushad
- Advanced Materials Research Chair, Department of Chemistry, College of Science, King Saud University, Riyadh 11451, Saudi Arabia; Yonsei Frontier Lab, Yonsei University, Seoul, Republic of Korea; International Research Centre of Nanotechnology for Himalayan Sustainability (IRCNHS), Shoolini University, Solan 173212, Himachal Pradesh, India.
| | - Eder C Lima
- Institute of Chemistry, Federal University of Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil
| | - Shengxin Zhang
- School of Geography and Resources Science, Neijiang Normal University, Neijiang 641100, China
| | - Sabry M Shaheen
- University of Wuppertal, School of Architecture and Civil Engineering, Institute of Foundation Engineering, Water- and Waste-Management, Laboratory of Soil-and Groundwater-Management, Pauluskirchstraße 7, 42285 Wuppertal, Germany; King Abdulaziz University, Faculty of Meteorology, Environment, and Arid Land Agriculture, Department of Arid Land Agriculture, 21589 Jeddah, Saudi Arabia; University of Kafrelsheikh, Faculty of Agriculture, Department of Soil and Water Sciences, 33516 Kafr El-Sheikh, Egypt.
| | - Jörg Rinklebe
- University of Wuppertal, School of Architecture and Civil Engineering, Institute of Foundation Engineering, Water- and Waste-Management, Laboratory of Soil-and Groundwater-Management, Pauluskirchstraße 7, 42285 Wuppertal, Germany; University of Sejong, Department of Environment, Energy and Geoinformatics, Guangjin-Gu, Seoul 05006, Republic of Korea.
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Saccharomyces cerevisiae Concentrates Subtoxic Copper onto Cell Wall from Solid Media Containing Reducing Sugars as Carbon Source. Bioengineering (Basel) 2021; 8:bioengineering8030036. [PMID: 33800957 PMCID: PMC8000517 DOI: 10.3390/bioengineering8030036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2020] [Revised: 02/27/2021] [Accepted: 03/03/2021] [Indexed: 12/04/2022] Open
Abstract
Copper is essential for life, but it can be deleterious in concentrations that surpass the physiological limits. Copper pollution is related to widespread human activities, such as viticulture and wine production. To unravel aspects of how organisms cope with copper insults, we used Saccharomyces cerevisiae as a model for adaptation to high but subtoxic concentrations of copper. We found that S. cerevisiae cells could tolerate high copper concentration by forming deposits on the cell wall and that the copper-containing deposits accumulated predominantly when cells were grown statically on media prepared with reducing sugars (glucose, galactose) as sole carbon source, but not on media containing nonreducing carbon sources, such as glycerol or lactate. Exposing cells to copper in liquid media under strong agitation prevented the formation of copper-containing deposits at the cell wall. Disruption of low-affinity copper intake through the plasma membrane increased the potential of the cell to form copper deposits on the cell surface. These results imply that biotechnology problems caused by high copper concentration can be tackled by selecting yeast strains and conditions to allow the removal of excess copper from various contaminated sites in the forms of solid deposits which do not penetrate the cell.
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Ruta LL, Farcasanu IC. Interaction between Polyphenolic Antioxidants and Saccharomyces cerevisiae Cells Defective in Heavy Metal Transport across the Plasma Membrane. Biomolecules 2020; 10:E1512. [PMID: 33158278 PMCID: PMC7694260 DOI: 10.3390/biom10111512] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2020] [Revised: 10/24/2020] [Accepted: 11/03/2020] [Indexed: 12/14/2022] Open
Abstract
Natural polyphenols are compounds with important biological implications which include antioxidant and metal-chelating characteristics relevant for their antimicrobial, antitumor, or antiaging potential. The mechanisms linking polyphenols and heavy metals in their concerted actions on cells are not completely elucidated. In this study, we used the model eukaryotic microorganism Saccharomyces cerevisiae to detect the action of widely prevalent natural polyphenols on yeast cells defective in the main components involved in essential heavy metal transport across the plasma membrane. We found that caffeic and gallic acids interfered with Zn accumulation, causing delays in cell growth that were alleviated by Zn supplementation. The flavones morin and quercetin interfered with both Mn and Zn accumulation, which resulted in growth improvement, but supplemental Mn and especially Zn turned the initially benefic action of morin and quercetin into potential toxicity. Our results imply that caution is needed when administering food supplements or nutraceuticals which contain both natural polyphenols and essential elements, especially zinc.
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Affiliation(s)
| | - Ileana Cornelia Farcasanu
- Department of Organic Chemistry, Biochemistry and Catalysis, Faculty of Chemistry, University of Bucharest, Sos. Panduri 90–92, 050663 Bucharest, Romania;
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Cytotoxicity of Oleandrin Is Mediated by Calcium Influx and by Increased Manganese Uptake in Saccharomyces cerevisiae Cells. Molecules 2020; 25:molecules25184259. [PMID: 32957533 PMCID: PMC7570853 DOI: 10.3390/molecules25184259] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Revised: 09/09/2020] [Accepted: 09/15/2020] [Indexed: 11/22/2022] Open
Abstract
Oleandrin, the main component of Nerium oleander L. extracts, is a cardiotoxic glycoside with multiple pharmacological implications, having potential anti-tumoral and antiviral characteristics. Although it is accepted that the main mechanism of oleandrin action is the inhibition of Na+/K+-ATPases and subsequent increase in cell calcium, many aspects which determine oleandrin cytotoxicity remain elusive. In this study, we used the model Saccharomyces cerevisiae to unravel new elements accounting for oleandrin toxicity. Using cells expressing the Ca2+-sensitive photoprotein aequorin, we found that oleandrin exposure resulted in Ca2+ influx into the cytosol and that failing to pump Ca2+ from the cytosol to the vacuole increased oleandrin toxicity. We also found that oleandrin exposure induced Mn2+ accumulation by yeast cells via the plasma membrane Smf1 and that mutants with defects in Mn2+ homeostasis are oleandrin-hypersensitive. Our data suggest that combining oleandrin with agents which alter Ca2+ or Mn2+ uptake may be a way of controlling oleandrin toxicity.
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Yang X, Liu L, Tan W, Liu C, Dang Z, Qiu G. Remediation of heavy metal contaminated soils by organic acid extraction and electrochemical adsorption. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 264:114745. [PMID: 32416427 DOI: 10.1016/j.envpol.2020.114745] [Citation(s) in RCA: 52] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Revised: 04/27/2020] [Accepted: 05/04/2020] [Indexed: 06/11/2023]
Abstract
Remediation of heavy metal contaminated soils remains a global challenge. Here, low-molecular-weight organic acids were used to extract Cu and Zn from polluted soils, and the extracted heavy metals were subsequently adsorbed by activated carbon electrodes. The electrochemical adsorption mechanism as well as the influence of pH, organic acid type and voltage were investigated, and the soil remediation effect was further evaluated by the cultivation of rape. After extraction by citrate at initial pH 8.3 and electrochemical adsorption at 0.9 V for 7 d, the concentrations of total and bioavailable Cu in soils decreased from 1090 to 281 to 391 and 52 mg kg-1, and those of Zn decreased from 262 to 39 to 208 and 30 mg kg-1, respectively. Cu and Zn ions were mainly electrochemically adsorbed on the carbon cathode and anode, respectively, resulting in decreases of their concentrations to below 1 mg L-1 in the leachate. The presence of organic acids improved the remediation performance in the order of citrate > oxalate > acetate. The decrease in the initial pH of citrate solution enhanced the removal rate of Zn, while seemed to have no effect on that of Cu. The removal capacity for heavy metals decreased with decreasing cell voltage from 0.9 to 0.3 V. In the rape cultivation experiment, the Cu and Zn contents in shoot and root were decreased by more than 50%, validating the soil remediation effect. The present work proposes a facile method for heavy metal removal from contaminated soils.
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Affiliation(s)
- Xiong Yang
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtse River), Ministry of Agriculture and Rural Affairs, Hubei Key Laboratory of Soil Environment and Pollution Remediation, College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, Hubei Province, China
| | - Lihu Liu
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtse River), Ministry of Agriculture and Rural Affairs, Hubei Key Laboratory of Soil Environment and Pollution Remediation, College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, Hubei Province, China
| | - Wenfeng Tan
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtse River), Ministry of Agriculture and Rural Affairs, Hubei Key Laboratory of Soil Environment and Pollution Remediation, College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, Hubei Province, China
| | - Chengshuai Liu
- State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, Guiyang, 550081, China
| | - Zhi Dang
- School of Environment and Energy, South China University of Technology, Guangzhou, 510006, China
| | - Guohong Qiu
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtse River), Ministry of Agriculture and Rural Affairs, Hubei Key Laboratory of Soil Environment and Pollution Remediation, College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, Hubei Province, China.
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7
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Dahabieh MS, Thevelein JM, Gibson B. Multimodal Microorganism Development: Integrating Top-Down Biological Engineering with Bottom-Up Rational Design. Trends Biotechnol 2019; 38:241-253. [PMID: 31653446 DOI: 10.1016/j.tibtech.2019.09.006] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Revised: 09/28/2019] [Accepted: 09/30/2019] [Indexed: 12/12/2022]
Abstract
Biological engineering has unprecedented potential to solve society's most pressing challenges. Engineering approaches must consider complex technical, economic, and social factors. This requires methods that confer gene/pathway-level functionality and organism-level robustness in rapid and cost-effective ways. This article compares foundational engineering approaches - bottom-up, gene-targeted engineering, and top-down, whole-genome engineering - and identifies significant complementarity between them. Cases drawn from engineering Saccharomyces cerevisiae exemplify the synergy of a combined approach. Indeed, multimodal engineering streamlines strain development by leveraging the complementarity of whole-genome and gene-targeted engineering to overcome the gap in design knowledge that restricts rational design. As biological engineers target more complex systems, this dual-track approach is poised to become an increasingly important tool to realize the promise of synthetic biology.
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Affiliation(s)
- Matthew S Dahabieh
- Renaissance BioScience, 410-2389 Health Sciences Mall, Vancouver, BC V6T1Z3, Canada
| | - Johan M Thevelein
- Laboratory of Molecular Cell Biology, Institute of Botany and Microbiology, Katholieke Universiteit (KU) Leuven, Leuven, Belgium; Center for Microbiology, Vlaams Instituut voor Biotechnologie (VIB), Kasteelpark Arenberg 31, B-3001 Leuven-Heverlee, Flanders, Belgium
| | - Brian Gibson
- VTT Technical Research Centre of Finland, Tietotie 2, VTT, PO Box 1000, FI-02044 Espoo, Finland.
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Zhang D, Ma N, Guo Z, Chen P, Ma R, Sun X, Wang D, Wang J, Xu Y. Improved cadmium resistance and removal capacity in Pichia kudriavzevii A16 by sucrose preincubation. J Basic Microbiol 2019; 59:867-878. [PMID: 31347180 DOI: 10.1002/jobm.201900272] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Revised: 06/25/2019] [Accepted: 07/02/2019] [Indexed: 12/18/2022]
Abstract
Removal of heavy metals from food material by growing micro-organisms is limited by the toxicity to cells. In this study, different preincubation treatments were investigated to analyze their effects on cadmium resistance and removal ability of Pichia kudriavzevii A16 and Saccharomyces cerevisiae CICC1211. Sucrose preincubation improved the cadmium resistance of both yeast cells and increased the cadmium-removal rate of P. kudriavzevii A16. An evident decrease of intracellular and cell-surface cadmium accumulation was observed after sucrose preincubation, which may be the primary reason responsible for the improved cadmium resistance. Flow cytometry assay showed that sucrose significantly reduced the production of reactive oxygen species (ROS) and cell death rate of both yeasts under cadmium compared with those normally cultured cells. Under cadmium stress, the content of both protein carbonyls and malonyldialdehyde were also reduced by the addition of sucrose, the results were in accordance with the tendency of ROS, exhibiting a defending function of sucrose. Osmotic regulators as proline and trehalose were increased by sucrose preincubation in P. kudriavzevii A16 in the presence of cadmium. The results suggested that sucrose preincubation could be applied to improve cadmium resistance and removal rate of yeasts.
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Affiliation(s)
- Dandan Zhang
- Laboratory of Food Chemistry and Nutrition, College of Food Science and Engineering, Ocean University of China, Qingdao, China
| | - Ning Ma
- Laboratory of Food Chemistry and Nutrition, College of Food Science and Engineering, Ocean University of China, Qingdao, China
| | - Zhen Guo
- Department of Computer Science, Virginia Polytechnic Institute and State University, Blacksburg, Virginia
| | - Peng Chen
- Laboratory of Food Chemistry and Nutrition, College of Food Science and Engineering, Ocean University of China, Qingdao, China
| | - Ranran Ma
- Laboratory of Food Chemistry and Nutrition, College of Food Science and Engineering, Ocean University of China, Qingdao, China
| | - Xiaowen Sun
- Laboratory of Food Chemistry and Nutrition, College of Food Science and Engineering, Ocean University of China, Qingdao, China
| | - Dongfeng Wang
- Laboratory of Food Chemistry and Nutrition, College of Food Science and Engineering, Ocean University of China, Qingdao, China
| | - Junwei Wang
- China Animal Health and Epidemiology Center, Qingdao, Shandong, China
| | - Ying Xu
- Laboratory of Food Chemistry and Nutrition, College of Food Science and Engineering, Ocean University of China, Qingdao, China
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Zinicovscaia I, Safonov A, Ostalkevich S, Gundorina S, Nekhoroshkov P, Grozdov D. Metal ions removal from different type of industrial effluents using Spirulina platensis biomass. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION 2019; 21:1442-1448. [PMID: 31244333 DOI: 10.1080/15226514.2019.1633264] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The biomass of the cyanobacterium Spirulina platensis was used for metal removal from four industrial effluents with different chemical composition. The process of metal bioaccumulation (alive biomass) and biosorption (dry biomass) was studied at the native effluents pH as well as the pH 9.5. Metal uptake by S. platensis biomass was determined by means of neutron activation analysis (NNA). The obtained results show different affinity of biomass to metals presented in effluents. The results of this study have indicated that S. platensis is a very good candidate for the removal of heavy metals from complex industrial effluents.
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Affiliation(s)
- Inga Zinicovscaia
- Joint Institute for Nuclear Research, Moscow, Russia
- Horia Hulubei National Institute for R&D in Physics and Nuclear Engineering, Bucharest, Romania
| | - Alexey Safonov
- Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Moscow, Russia
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Manganese Suppresses the Haploinsufficiency of Heterozygous trpy1Δ/TRPY1 Saccharomyces cerevisiae Cells and Stimulates the TRPY1-Dependent Release of Vacuolar Ca 2+ under H₂O₂ Stress. Cells 2019; 8:cells8020079. [PMID: 30678234 PMCID: PMC6406398 DOI: 10.3390/cells8020079] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Revised: 01/09/2019] [Accepted: 01/18/2019] [Indexed: 11/17/2022] Open
Abstract
Transient potential receptor (TRP) channels are conserved cation channels found in most eukaryotes, known to sense a variety of chemical, thermal or mechanical stimuli. The Saccharomyces cerevisiae TRPY1 is a TRP channel with vacuolar localization involved in the cellular response to hyperosmotic shock and oxidative stress. In this study, we found that S. cerevisiae diploid cells with heterozygous deletion in TRPY1 gene are haploinsufficient when grown in synthetic media deficient in essential metal ions and that this growth defect is alleviated by non-toxic Mn2+ surplus. Using cells expressing the Ca2+-sensitive photoprotein aequorin we found that Mn2+ augmented the Ca2+ flux into the cytosol under oxidative stress, but not under hyperosmotic shock, a trait that was absent in the diploid cells with homozygous deletion of TRPY1 gene. TRPY1 activation under oxidative stress was diminished in cells devoid of Smf1 (the Mn2+-high-affinity plasma membrane transporter) but it was clearly augmented in cells lacking Pmr1 (the endoplasmic reticulum (ER)/Golgi located ATPase responsible for Mn2+ detoxification via excretory pathway). Taken together, these observations lead to the conclusion that increased levels of intracytosolic Mn2+ activate TRPY1 in the response to oxidative stress.
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Ruta LL, Banu MA, Neagoe AD, Kissen R, Bones AM, Farcasanu IC. Accumulation of Ag(I) by Saccharomyces cerevisiae Cells Expressing Plant Metallothioneins. Cells 2018; 7:E266. [PMID: 30545005 PMCID: PMC6315939 DOI: 10.3390/cells7120266] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2018] [Revised: 12/06/2018] [Accepted: 12/10/2018] [Indexed: 11/16/2022] Open
Abstract
The various applications of Ag(I) generated the necessity to obtain Ag(I)-accumulating organisms for the removal of surplus Ag(I) from contaminated sites or for the concentration of Ag(I) from Ag(I)-poor environments. In this study we obtained Ag(I)-accumulating cells by expressing plant metallothioneins (MTs) in the model Saccharomyces cerevisiae. The cDNAs of seven Arabidopsis thaliana MTs (AtMT1a, AtMT1c, AtMT2a, AtMT2b, AtMT3, AtMT4a and AtMT4b) and four Noccaea caerulescens MTs (NcMT1, NcMT2a, NcMT2b and NcMT3) fused to myrGFP displaying an N-terminal myristoylation sequence for plasma membrane targeting were expressed in S. cerevisiae and checked for Ag(I)-related phenotype. The transgenic yeast cells were grown in copper-deficient media to ensure the expression of the plasma membrane high-affinity Cu(I) transporter Ctr1, and also to elude the copper-related inhibition of Ag(I) transport into the cell. All plant MTs expressed in S. cerevisiae conferred Ag(I) tolerance to the yeast cells. Among them, myrGFP-NcMT3 afforded Ag(I) accumulation under high concentration (10⁻50 μM), while myrGFP-AtMT1a conferred increased accumulation capacity under low (1 μM) or even trace Ag(I) (0.02⁻0.05 μM). The ability to tolerate high concentrations of Ag(I) coupled with accumulative characteristics and robust growth showed by some of the transgenic yeasts highlighted the potential of these strains for biotechnology applications.
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Affiliation(s)
- Lavinia L Ruta
- Faculty of Chemistry, University of Bucharest, Sos. Panduri 90-92, 050663 Bucharest, Romania.
| | - Melania A Banu
- Faculty of Biology, University of Bucharest, Splaiul Independentei 91-95, 050095 Bucharest, Romania.
| | - Aurora D Neagoe
- Faculty of Biology, University of Bucharest, Splaiul Independentei 91-95, 050095 Bucharest, Romania.
| | - Ralph Kissen
- Cell, Molecular Biology and Genomics Group, Department of Biology, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway.
| | - Atle M Bones
- Cell, Molecular Biology and Genomics Group, Department of Biology, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway.
| | - Ileana C Farcasanu
- Faculty of Chemistry, University of Bucharest, Sos. Panduri 90-92, 050663 Bucharest, Romania.
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12
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Liu L, Li W, Song W, Guo M. Remediation techniques for heavy metal-contaminated soils: Principles and applicability. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 633:206-219. [PMID: 29573687 DOI: 10.1016/j.scitotenv.2018.03.161] [Citation(s) in RCA: 631] [Impact Index Per Article: 105.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Revised: 03/14/2018] [Accepted: 03/15/2018] [Indexed: 05/18/2023]
Abstract
Globally there are over 20millionha of land contaminated by the heavy metal(loid)s As, Cd, Cr, Hg, Pb, Co, Cu, Ni, Zn, and Se, with the present soil concentrations higher than the geo-baseline or regulatory levels. In-situ and ex-situ remediation techniques have been developed to rectify the heavy metal-contaminated sites, including surface capping, encapsulation, landfilling, soil flushing, soil washing, electrokinetic extraction, stabilization, solidification, vitrification, phytoremediation, and bioremediation. These remediation techniques employ containment, extraction/removal, and immobilization mechanisms to reduce the contamination effects through physical, chemical, biological, electrical, and thermal remedy processes. These techniques demonstrate specific advantages, disadvantages, and applicability. In general, in-situ soil remediation is more cost-effective than ex-situ treatment, and contaminant removal/extraction is more favorable than immobilization and containment. Among the available soil remediation techniques, electrokinetic extraction, chemical stabilization, and phytoremediation are at the development stage, while the others have been practiced at full, field scales. Comprehensive assessment indicates that chemical stabilization serves as a temporary soil remediation technique, phytoremediation needs improvement in efficiency, surface capping and landfilling are applicable to small, serious-contamination sites, while solidification and vitrification are the last remediation option. The cost and duration of soil remediation are technique-dependent and site-specific, up to $500ton-1 soil (or $1500m-3 soil or $100m-2 land) and 15years. Treatability studies are crucial to selecting feasible techniques for a soil remediation project, with considerations of the type and degree of contamination, remediation goals, site characteristics, cost effectiveness, implementation time, and public acceptability.
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Affiliation(s)
- Lianwen Liu
- School of Earth Sciences and Engineering, Nanjing University, Nanjing, Jiangsu 210046, China
| | - Wei Li
- School of Earth Sciences and Engineering, Nanjing University, Nanjing, Jiangsu 210046, China
| | - Weiping Song
- Department of Chemistry, Delaware State University, Dover, DE 19901, USA
| | - Mingxin Guo
- Department of Agriculture and Natural Resources, Delaware State University, Dover, DE 19901, USA.
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