1
|
Stirbet A, Guo Y, Lazár D, Govindjee G. From leaf to multiscale models of photosynthesis: applications and challenges for crop improvement. PHOTOSYNTHESIS RESEARCH 2024; 161:21-49. [PMID: 38619700 DOI: 10.1007/s11120-024-01083-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Accepted: 01/29/2024] [Indexed: 04/16/2024]
Abstract
To keep up with the growth of human population and to circumvent deleterious effects of global climate change, it is essential to enhance crop yield to achieve higher production. Here we review mathematical models of oxygenic photosynthesis that are extensively used, and discuss in depth a subset that accounts for diverse approaches providing solutions to our objective. These include models (1) to study different ways to enhance photosynthesis, such as fine-tuning antenna size, photoprotection and electron transport; (2) to bioengineer carbon metabolism; and (3) to evaluate the interactions between the process of photosynthesis and the seasonal crop dynamics, or those that have included statistical whole-genome prediction methods to quantify the impact of photosynthesis traits on the improvement of crop yield. We conclude by emphasizing that the results obtained in these studies clearly demonstrate that mathematical modelling is a key tool to examine different approaches to improve photosynthesis for better productivity, while effective multiscale crop models, especially those that also include remote sensing data, are indispensable to verify different strategies to obtain maximized crop yields.
Collapse
Affiliation(s)
| | - Ya Guo
- Key Laboratory of Advanced Process Control for Light Industry, Ministry of Education Jiangnan University, Wuxi, 214122, China
| | - Dušan Lazár
- Department of Biophysics, Faculty of Science, Palacký Univesity, Šlechtitelů 27, 78371, Olomouc, Czech Republic
| | - Govindjee Govindjee
- Department of Biochemistry, Department of Plant Biology, and the Center of Biophysics & Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
| |
Collapse
|
2
|
Niu Y, Matsubara S, Nedbal L, Lazár D. Dynamics and interplay of photosynthetic regulatory processes depend on the amplitudes of oscillating light. PLANT, CELL & ENVIRONMENT 2024; 47:2240-2257. [PMID: 38482712 DOI: 10.1111/pce.14879] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Accepted: 02/28/2024] [Indexed: 04/30/2024]
Abstract
Plants have evolved multiple regulatory mechanisms to cope with natural light fluctuations. The interplay between these mechanisms leads presumably to the resilience of plants in diverse light patterns. We investigated the energy-dependent nonphotochemical quenching (qE) and cyclic electron transports (CET) in light that oscillated with a 60-s period with three different amplitudes. The photosystem I (PSI) and photosystem II (PSII) function-related quantum yields and redox changes of plastocyanin and ferredoxin were measured in Arabidopsis thaliana wild types and mutants with partial defects in qE or CET. The decrease in quantum yield of qE due to the lack of either PsbS- or violaxanthin de-epoxidase was compensated by an increase in the quantum yield of the constitutive nonphotochemical quenching. The mutant lacking NAD(P)H dehydrogenase (NDH)-like-dependent CET had a transient significant PSI acceptor side limitation during the light rising phase under high amplitude of light oscillations. The mutant lacking PGR5/PGRL1-CET restricted electron flows and failed to induce effective photosynthesis control, regardless of oscillation amplitudes. This suggests that PGR5/PGRL1-CET is important for the regulation of PSI function in various amplitudes of light oscillation, while NDH-like-CET acts' as a safety valve under fluctuating light with high amplitude. The results also bespeak interplays among multiple photosynthetic regulatory mechanisms.
Collapse
Affiliation(s)
- Yuxi Niu
- Institute of Bio- and Geosciences/Plant Sciences, Forschungszentrum Jülich, Wilhelm-Johnen-Straße, Jülich, Germany
| | - Shizue Matsubara
- Institute of Bio- and Geosciences/Plant Sciences, Forschungszentrum Jülich, Wilhelm-Johnen-Straße, Jülich, Germany
| | - Ladislav Nedbal
- Institute of Bio- and Geosciences/Plant Sciences, Forschungszentrum Jülich, Wilhelm-Johnen-Straße, Jülich, Germany
- Department of Biophysics, Faculty of Science, Palacký University, Olomouc, Czech Republic
| | - Dušan Lazár
- Department of Biophysics, Faculty of Science, Palacký University, Olomouc, Czech Republic
| |
Collapse
|
3
|
Fukuda Y, Ishiyama C, Kawai-Yamada M, Hashida SN. Adjustment of light-responsive NADP dynamics in chloroplasts by stromal pH. Nat Commun 2023; 14:7148. [PMID: 37932304 PMCID: PMC10628217 DOI: 10.1038/s41467-023-42995-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Accepted: 10/26/2023] [Indexed: 11/08/2023] Open
Abstract
Cyclic electron transfer (CET) predominates when NADP+ is at basal levels, early in photosynthetic induction; however, the mechanism underlying the subsequent supply of NADP+ to fully drive steady-state linear electron transfer remains unclear. Here, we investigated whether CET is involved in de novo NADP+ supply in Arabidopsis thaliana and measured chloroplastic NADP dynamics to evaluate responsiveness to variable light, photochemical inhibitors, darkness, and CET activity. The sum of oxidized and reduced forms shows that levels of NADP and NAD increase and decrease, respectively, in response to light; levels of NADP and NAD decrease and increase in the dark, respectively. Moreover, consistent with the pH change in the stroma, the pH preference of chloroplast NAD+ phosphorylation and NADP+ dephosphorylation is alkaline and weakly acidic, respectively. Furthermore, CET is correlated with upregulation of light-responsive NADP level increases and downregulation of dark-responsive NADP level reductions. These findings are consistent with CET helping to regulate NADP pool size via stromal pH regulation under fluctuating light conditions.
Collapse
Affiliation(s)
- Yusuke Fukuda
- Civil Engineering Research & Environmental Studies (CERES), Inc., 1646, Abiko, Chiba, 270-1194, Japan
| | - Chinami Ishiyama
- Civil Engineering Research & Environmental Studies (CERES), Inc., 1646, Abiko, Chiba, 270-1194, Japan
| | - Maki Kawai-Yamada
- Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570, Japan
| | - Shin-Nosuke Hashida
- Sustainable System Research Laboratory, Central Research Institute of Electric Power Industry (CRIEPI), 1646, Abiko, Chiba, 270-1194, Japan.
| |
Collapse
|
4
|
Seiml-Buchinger V, Reifschneider E, Bittner A, Baier M. Ascorbate peroxidase postcold regulation of chloroplast NADPH dehydrogenase activity controls cold memory. PLANT PHYSIOLOGY 2022; 190:1997-2016. [PMID: 35946757 PMCID: PMC9614503 DOI: 10.1093/plphys/kiac355] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Accepted: 07/06/2022] [Indexed: 06/15/2023]
Abstract
Exposure of Arabidopsis (Arabidopsis thaliana) to 4°C imprints a cold memory that modulates gene expression in response to a second (triggering) stress stimulus applied several days later. Comparison of plastid transcriptomes of cold-primed and control plants directly before they were exposed to the triggering stimulus showed downregulation of several subunits of chloroplast NADPH dehydrogenase (NDH) and regulatory subunits of ATP synthase. NDH is, like proton gradient 5 (PGR5)-PGR5-like1 (PGRL1), a thylakoid-embedded, ferredoxin-dependent plastoquinone reductase that protects photosystem I and stabilizes ATP synthesis by cyclic electron transport (CET). Like PGRL1A and PGRL1B transcript levels, ndhA and ndhD transcript levels decreased during the 24-h long priming cold treatment. PGRL1 transcript levels were quickly reset in the postcold phase, but expression of ndhA remained low. The transcript abundances of other ndh genes decreased within the next days. Comparison of thylakoid-bound ascorbate peroxidase (tAPX)-free and transiently tAPX-overexpressing or tAPX-downregulating Arabidopsis lines demonstrated that ndh expression is suppressed by postcold induction of tAPX. Four days after cold priming, when tAPX protein accumulation was maximal, NDH activity was almost fully lost. Lack of the NdhH-folding chaperonin Crr27 (Cpn60β4), but not lack of the NDH activity modulating subunits NdhM, NdhO, or photosynthetic NDH subcomplex B2 (PnsB2), strengthened priming regulation of zinc finger of A. thaliana 10, which is a nuclear-localized target gene of the tAPX-dependent cold-priming pathway. We conclude that cold-priming modifies chloroplast-to-nucleus stress signaling by tAPX-mediated suppression of NDH-dependent CET and that plastid-encoded NdhH, which controls subcomplex A assembly, is of special importance for memory stabilization.
Collapse
Affiliation(s)
- Victoria Seiml-Buchinger
- Plant Physiology, Freie Universität Berlin, Dahlem Centre of Plant Sciences, Berlin 14195,Germany
| | - Elena Reifschneider
- Plant Physiology, Freie Universität Berlin, Dahlem Centre of Plant Sciences, Berlin 14195,Germany
| | - Andras Bittner
- Plant Physiology, Freie Universität Berlin, Dahlem Centre of Plant Sciences, Berlin 14195,Germany
| | - Margarete Baier
- Plant Physiology, Freie Universität Berlin, Dahlem Centre of Plant Sciences, Berlin 14195,Germany
| |
Collapse
|
5
|
Leister D, Marino G, Minagawa J, Dann M. An ancient function of PGR5 in iron delivery? TRENDS IN PLANT SCIENCE 2022; 27:971-980. [PMID: 35618596 DOI: 10.1016/j.tplants.2022.04.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2021] [Revised: 03/29/2022] [Accepted: 04/26/2022] [Indexed: 06/15/2023]
Abstract
In all phototrophic organisms, the photosynthetic apparatus must be protected from light-induced damage. One important mechanism that mitigates photodamage in plants is antimycin A (AA)-sensitive cyclic electron flow (CEF), the evolution of which remains largely obscure. Here we show that proton gradient regulation 5 (PGR5), a key protein involved in AA-sensitive CEF, displays intriguing commonalities - including sequence and structural features - with a group of ferritin-like proteins. We therefore propose that PGR5 may originally have been involved in prokaryotic iron mobilization and delivery, which facilitated a primordial type of CEF as a side effect. The abandonment of the bacterioferritin system during the transformation of cyanobacterial endosymbionts into chloroplasts might have allowed PGR5 to functionally specialize in CEF.
Collapse
Affiliation(s)
- Dario Leister
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-Universität München, D-82152 Planegg-Martinsried, Germany
| | - Giada Marino
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-Universität München, D-82152 Planegg-Martinsried, Germany
| | - Jun Minagawa
- Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan
| | - Marcel Dann
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-Universität München, D-82152 Planegg-Martinsried, Germany; Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan.
| |
Collapse
|
6
|
Demmig-Adams B, López-Pozo M, Polutchko SK, Fourounjian P, Stewart JJ, Zenir MC, Adams WW. Growth and Nutritional Quality of Lemnaceae Viewed Comparatively in an Ecological and Evolutionary Context. PLANTS (BASEL, SWITZERLAND) 2022; 11:145. [PMID: 35050033 PMCID: PMC8779320 DOI: 10.3390/plants11020145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/14/2021] [Revised: 12/30/2021] [Accepted: 01/04/2022] [Indexed: 06/14/2023]
Abstract
This review focuses on recently characterized traits of the aquatic floating plant Lemna with an emphasis on its capacity to combine rapid growth with the accumulation of high levels of the essential human micronutrient zeaxanthin due to an unusual pigment composition not seen in other fast-growing plants. In addition, Lemna's response to elevated CO2 was evaluated in the context of the source-sink balance between plant sugar production and consumption. These and other traits of Lemnaceae are compared with those of other floating aquatic plants as well as terrestrial plants adapted to different environments. It was concluded that the unique features of aquatic plants reflect adaptations to the freshwater environment, including rapid growth, high productivity, and exceptionally strong accumulation of high-quality vegetative storage protein and human antioxidant micronutrients. It was further concluded that the insensitivity of growth rate to environmental conditions and plant source-sink imbalance may allow duckweeds to take advantage of elevated atmospheric CO2 levels via particularly strong stimulation of biomass production and only minor declines in the growth of new tissue. It is proposed that declines in nutritional quality under elevated CO2 (due to regulatory adjustments in photosynthetic metabolism) may be mitigated by plant-microbe interaction, for which duckweeds have a high propensity.
Collapse
Affiliation(s)
- Barbara Demmig-Adams
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA; (S.K.P.); (P.F.); (J.J.S.); (M.C.Z.); (W.W.A.III)
| | - Marina López-Pozo
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), 48049 Bilbao, Spain;
| | - Stephanie K. Polutchko
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA; (S.K.P.); (P.F.); (J.J.S.); (M.C.Z.); (W.W.A.III)
| | - Paul Fourounjian
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA; (S.K.P.); (P.F.); (J.J.S.); (M.C.Z.); (W.W.A.III)
- International Lemna Association, Denville, NJ 07832, USA
| | - Jared J. Stewart
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA; (S.K.P.); (P.F.); (J.J.S.); (M.C.Z.); (W.W.A.III)
| | - Madeleine C. Zenir
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA; (S.K.P.); (P.F.); (J.J.S.); (M.C.Z.); (W.W.A.III)
| | - William W. Adams
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA; (S.K.P.); (P.F.); (J.J.S.); (M.C.Z.); (W.W.A.III)
| |
Collapse
|
7
|
Ma M, Liu Y, Bai C, Yang Y, Sun Z, Liu X, Zhang S, Han X, Yong JWH. The Physiological Functionality of PGR5/PGRL1-Dependent Cyclic Electron Transport in Sustaining Photosynthesis. FRONTIERS IN PLANT SCIENCE 2021; 12:702196. [PMID: 34305990 PMCID: PMC8294387 DOI: 10.3389/fpls.2021.702196] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Accepted: 06/07/2021] [Indexed: 05/07/2023]
Abstract
The cyclic electron transport (CET), after the linear electron transport (LET), is another important electron transport pathway during the light reactions of photosynthesis. The proton gradient regulation 5 (PGR5)/PRG5-like photosynthetic phenotype 1 (PGRL1) and the NADH dehydrogenase-like complex pathways are linked to the CET. Recently, the regulation of CET around photosystem I (PSI) has been recognized as crucial for photosynthesis and plant growth. Here, we summarized the main biochemical processes of the PGR5/PGRL1-dependent CET pathway and its physiological significance in protecting the photosystem II and PSI, ATP/NADPH ratio maintenance, and regulating the transitions between LET and CET in order to optimize photosynthesis when encountering unfavorable conditions. A better understanding of the PGR5/PGRL1-mediated CET during photosynthesis might provide novel strategies for improving crop yield in a world facing more extreme weather events with multiple stresses affecting the plants.
Collapse
Affiliation(s)
- Mingzhu Ma
- College of Land and Environment, National Key Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Northeast China Plant Nutrition and Fertilization Scientific Observation and Research Center for Ministry of Agriculture and Rural Affairs, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang Agricultural University, Shenyang, China
| | - Yifei Liu
- College of Land and Environment, National Key Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Northeast China Plant Nutrition and Fertilization Scientific Observation and Research Center for Ministry of Agriculture and Rural Affairs, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang Agricultural University, Shenyang, China
- The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, Australia
- School of Biological Sciences, The University of Western Australia, Perth, WA, Australia
- School of Agriculture and Environment, The University of Western Australia, Perth, WA, Australia
- *Correspondence: Yifei Liu, ; Xiaori Han,
| | - Chunming Bai
- National Sorghum Improvement Center, Liaoning Academy of Agricultural Sciences, Shenyang, China
| | - Yunhong Yang
- Professional Technology Innovation Center of Magnesium Nutrition, Yingkou Magnesite Chemical Ind Group Co., Ltd., Yingkou, China
| | - Zhiyu Sun
- College of Land and Environment, National Key Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Northeast China Plant Nutrition and Fertilization Scientific Observation and Research Center for Ministry of Agriculture and Rural Affairs, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang Agricultural University, Shenyang, China
| | - Xinyue Liu
- College of Land and Environment, National Key Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Northeast China Plant Nutrition and Fertilization Scientific Observation and Research Center for Ministry of Agriculture and Rural Affairs, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang Agricultural University, Shenyang, China
| | - Siwei Zhang
- College of Land and Environment, National Key Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Northeast China Plant Nutrition and Fertilization Scientific Observation and Research Center for Ministry of Agriculture and Rural Affairs, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang Agricultural University, Shenyang, China
| | - Xiaori Han
- College of Land and Environment, National Key Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Northeast China Plant Nutrition and Fertilization Scientific Observation and Research Center for Ministry of Agriculture and Rural Affairs, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang Agricultural University, Shenyang, China
- *Correspondence: Yifei Liu, ; Xiaori Han,
| | - Jean Wan Hong Yong
- School of Biological Sciences, The University of Western Australia, Perth, WA, Australia
- Department of Biosystems and Technology, Swedish University of Agricultural Sciences, Alnarp, Sweden
| |
Collapse
|
8
|
Zhou L, Gao S, Wu S, Han D, Wang H, Gu W, Hu Q, Wang J, Wang G. PGRL1 overexpression in Phaeodactylum tricornutum inhibits growth and reduces apparent PSII activity. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 103:1850-1857. [PMID: 32526813 DOI: 10.1111/tpj.14872] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 05/22/2020] [Accepted: 06/01/2020] [Indexed: 05/11/2023]
Abstract
Proton gradient regulation 5-like photosynthetic phenotype 1 (PGRL1)-dependent cyclic electron transport around photosystem I (PSI) plays important roles in the response to different stresses, including high light. Although the function of PGRL1 in higher plants and green algae has been thoroughly investigated, little information is available on the molecular mechanism of PGRL1 in diatoms. We created PGRL1 overexpression and knockdown transformants of Phaeodactylum tricornutum, the diatom model species, and investigated the impact on growth and photosynthesis under constant and fluctuating light conditions. PGRL1 over-accumulation resulted in significant decreases in growth rate and apparent photosystem II (PSII) activity and led to an opposing change of apparent PSII activity when turning to high light, demonstrating a similar influence on photosynthesis as a PSII inhibitor. Our results suggested that PGRL1 overexpression can reduce the apparent efficiency of PSII and inhibit growth in P. tricornutum. These findings provide physiological evidence that the accumulation of PGRL1 mainly functions around PSII instead of PSI.
Collapse
Affiliation(s)
- Lu Zhou
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China
- Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, China
- College of Earth Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Shan Gao
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China
- Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, China
| | - Songcui Wu
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China
- Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, China
| | - Danxiang Han
- Center for Microalgal Biotechnology and Biofuels, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China
- Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei, 430072, China
| | - Hui Wang
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China
- Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, China
| | - Wenhui Gu
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China
- Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, China
| | - Qiang Hu
- Center for Microalgal Biotechnology and Biofuels, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China
- Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei, 430072, China
| | - Jing Wang
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China
- College of Marine Life Sciences, Ocean University of China (OUC), Qingdao, 266003, China
| | - Guangce Wang
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China
- Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, China
| |
Collapse
|
9
|
Barbato R, Tadini L, Cannata R, Peracchio C, Jeran N, Alboresi A, Morosinotto T, Bajwa AA, Paakkarinen V, Suorsa M, Aro EM, Pesaresi P. Higher order photoprotection mutants reveal the importance of ΔpH-dependent photosynthesis-control in preventing light induced damage to both photosystem II and photosystem I. Sci Rep 2020; 10:6770. [PMID: 32317747 PMCID: PMC7174426 DOI: 10.1038/s41598-020-62717-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Accepted: 03/12/2020] [Indexed: 11/27/2022] Open
Abstract
Although light is essential for photosynthesis, when in excess, it may damage the photosynthetic apparatus, leading to a phenomenon known as photoinhibition. Photoinhibition was thought as a light-induced damage to photosystem II; however, it is now clear that even photosystem I may become very vulnerable to light. One main characteristic of light induced damage to photosystem II (PSII) is the increased turnover of the reaction center protein, D1: when rate of degradation exceeds the rate of synthesis, loss of PSII activity is observed. With respect to photosystem I (PSI), an excess of electrons, instead of an excess of light, may be very dangerous. Plants possess a number of mechanisms able to prevent, or limit, such damages by safe thermal dissipation of light energy (non-photochemical quenching, NPQ), slowing-down of electron transfer through the intersystem transport chain (photosynthesis-control, PSC) in co-operation with the Proton Gradient Regulation (PGR) proteins, PGR5 and PGRL1, collectively called as short-term photoprotection mechanisms, and the redistribution of light between photosystems, called state transitions (responsible of fluorescence quenching at PSII, qT), is superimposed to these short term photoprotective mechanisms. In this manuscript we have generated a number of higher order mutants by crossing genotypes carrying defects in each of the short-term photoprotection mechanisms, with the final aim to obtain a direct comparison of their role and efficiency in photoprotection. We found that mutants carrying a defect in the ΔpH-dependent photosynthesis-control are characterized by photoinhibition of both photosystems, irrespectively of whether PSBS-dependent NPQ or state transitions defects were present or not in the same individual, demonstrating the primary role of PSC in photoprotection. Moreover, mutants with a limited capability to develop a strong PSBS-dependent NPQ, were characterized by a high turnover of the D1 protein and high values of Y(NO), which might reflect energy quenching processes occurring within the PSII reaction center.
Collapse
Affiliation(s)
- Roberto Barbato
- Department of Sciences and Innovation Technology, University of Eastern Piedmont Amadeo Avogadro, I-15121, Alessandria, Italy.
| | - Luca Tadini
- Department of Biosciences, University of Milan, I-20133, Milan, Italy
| | - Romina Cannata
- Department of Sciences and Innovation Technology, University of Eastern Piedmont Amadeo Avogadro, I-15121, Alessandria, Italy
| | | | - Nicolaj Jeran
- Department of Biosciences, University of Milan, I-20133, Milan, Italy
| | | | | | - Azfar Ali Bajwa
- Molecular Plant Biology, Department of Biochemistry, University of Turku, SF-20520, Turku, Finland
| | - Virpi Paakkarinen
- Molecular Plant Biology, Department of Biochemistry, University of Turku, SF-20520, Turku, Finland
| | - Marjaana Suorsa
- Molecular Plant Biology, Department of Biochemistry, University of Turku, SF-20520, Turku, Finland
| | - Eva-Mari Aro
- Molecular Plant Biology, Department of Biochemistry, University of Turku, SF-20520, Turku, Finland
| | - Paolo Pesaresi
- Department of Biosciences, University of Milan, I-20133, Milan, Italy
| |
Collapse
|
10
|
Tan Y, Zhang QS, Zhao W, Liu Z, Ma MY, Zhong MY, Wang MX. The highly efficient NDH-dependent photosystem I cyclic electron flow pathway in the marine angiosperm Zostera marina. PHOTOSYNTHESIS RESEARCH 2020; 144:49-62. [PMID: 32152819 DOI: 10.1007/s11120-020-00732-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Accepted: 03/03/2020] [Indexed: 05/13/2023]
Abstract
Zostera marina, a fully submerged marine angiosperm with a unique evolutionary history associated with its terrestrial origin, has distinct photochemical characteristics caused by its oxygen-evolving complex (OEC) being prone to deactivation in visible light. Based on the present phylogenetic analysis, the chloroplast NADPH dehydrogenase-like (NDH) complex was found to be completed in of Z. marina, unlike other marine plants, suggesting its crucial role. Thus, the responses of electron transport to irradiation were investigated through multiple chlorophyll fluorescence techniques and Western blot analysis. Moreover, the respective contribution of the two photosystem I cyclic electron flow (PSI-CEF) pathways to the generation of trans-thylakoid proton gradient (∆pH) was also examined using inhibitors. The contributions of the two PSI-CEF pathways to ∆pH were similar; furthermore, there was a trade-off between the two pathways under excess irradiation: the PGR5/L1-dependent PSI-CEF decreased gradually following its activation during the initial illumination, while NDH-dependent PSI-CEF was activated gradually with exposure duration. OEC inactivation was continuously under excess irradiation, which exhibits a positive linear correlation with the activation of NDH-dependent PSI-CEF. We suggest that PGR5/L1-dependent PSI-CEF was preferentially activated to handle the excess electron caused by the operation of OEC during the initial illumination. Subsequently, the increasing OEC inactivation with exposure duration resulted in a deficit of electrons. Limited electrons from PSI might preferentially synthesize NADPH, which could support the function of NDH-dependent PSI-CEF to generate ∆pH and ATP via reducing ferredoxin, thereby maintaining OEC stability.
Collapse
Affiliation(s)
- Ying Tan
- Ocean School, Yantai University, Yantai, 264005, People's Republic of China
| | - Quan Sheng Zhang
- Ocean School, Yantai University, Yantai, 264005, People's Republic of China.
| | - Wei Zhao
- Ocean School, Yantai University, Yantai, 264005, People's Republic of China
| | - Zhe Liu
- Ocean School, Yantai University, Yantai, 264005, People's Republic of China
| | - Ming Yu Ma
- Ocean School, Yantai University, Yantai, 264005, People's Republic of China
| | - Ming Yu Zhong
- Ocean School, Yantai University, Yantai, 264005, People's Republic of China
| | - Meng Xin Wang
- Ocean School, Yantai University, Yantai, 264005, People's Republic of China
| |
Collapse
|
11
|
Harada K, Arizono T, Sato R, Trinh MDL, Hashimoto A, Kono M, Tsujii M, Uozumi N, Takaichi S, Masuda S. DAY-LENGTH-DEPENDENT DELAYED-GREENING1, the Arabidopsis Homolog of the Cyanobacterial H+-Extrusion Protein, Is Essential for Chloroplast pH Regulation and Optimization of Non-Photochemical Quenching. PLANT & CELL PHYSIOLOGY 2019; 60:2660-2671. [PMID: 31665522 DOI: 10.1093/pcp/pcz203] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2019] [Accepted: 10/22/2019] [Indexed: 05/21/2023]
Abstract
Plants convert solar energy into chemical energy through photosynthesis, which supports almost all life activities on earth. Because the intensity and quality of sunlight can change dramatically throughout the day, various regulatory mechanisms help plants adjust their photosynthetic output accordingly, including the regulation of light energy accumulation to prevent the generation of damaging reactive oxygen species. Non-photochemical quenching (NPQ) is a regulatory mechanism that dissipates excess light energy, but how it is regulated is not fully elucidated. In this study, we report a new NPQ-regulatory protein named Day-Length-dependent Delayed-Greening1 (DLDG1). The Arabidopsis DLDG1 associates with the chloroplast envelope membrane, and the dldg1 mutant had a large NPQ value compared with wild type. The mutant also had a pale-green phenotype in developing leaves but only under continuous light; this phenotype was not observed when dldg1 was cultured in the dark for ≥8 h/d. DLDG1 is a homolog of the plasma membrane-localizing cyanobacterial proton-extrusion-protein A that is required for light-induced H+ extrusion and also shows similarity in its amino-acid sequence to that of Ycf10 encoded in the plastid genome. Arabidopsis DLDG1 enhances the growth-retardation phenotype of the Escherichia coli K+/H+ antiporter mutant, and the everted membrane vesicles of the E. coli expressing DLDG1 show the K+/H+ antiport activity. Our findings suggest that DLDG1 functionally interacts with Ycf10 to control H+ homeostasis in chloroplasts, which is important for the light-acclimation response, by optimizing the extent of NPQ.
Collapse
Affiliation(s)
- Kyohei Harada
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Takatoshi Arizono
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Ryoichi Sato
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Mai Duy Luu Trinh
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Akira Hashimoto
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Masaru Kono
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, 113-0033 Japan
| | - Masaru Tsujii
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Sendai, 980-8579 Japan
| | - Nobuyuki Uozumi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Sendai, 980-8579 Japan
| | - Shinichi Takaichi
- Department of Molecular Microbiology, Faculty of Life Science, Tokyo University of Agriculture, Tokyo, 156-8502 Japan
| | - Shinji Masuda
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
- Center for Biological Resources & Informatics, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| |
Collapse
|
12
|
Harada K, Arizono T, Sato R, Trinh MDL, Hashimoto A, Kono M, Tsujii M, Uozumi N, Takaichi S, Masuda S. DAY-LENGTH-DEPENDENT DELAYED-GREENING1, the Arabidopsis Homolog of the Cyanobacterial H+-Extrusion Protein, Is Essential for Chloroplast pH Regulation and Optimization of Non-Photochemical Quenching. PLANT & CELL PHYSIOLOGY 2019; 60:2660-2671. [PMID: 31665522 DOI: 10.1101/731653] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2019] [Accepted: 10/22/2019] [Indexed: 05/24/2023]
Abstract
Plants convert solar energy into chemical energy through photosynthesis, which supports almost all life activities on earth. Because the intensity and quality of sunlight can change dramatically throughout the day, various regulatory mechanisms help plants adjust their photosynthetic output accordingly, including the regulation of light energy accumulation to prevent the generation of damaging reactive oxygen species. Non-photochemical quenching (NPQ) is a regulatory mechanism that dissipates excess light energy, but how it is regulated is not fully elucidated. In this study, we report a new NPQ-regulatory protein named Day-Length-dependent Delayed-Greening1 (DLDG1). The Arabidopsis DLDG1 associates with the chloroplast envelope membrane, and the dldg1 mutant had a large NPQ value compared with wild type. The mutant also had a pale-green phenotype in developing leaves but only under continuous light; this phenotype was not observed when dldg1 was cultured in the dark for ≥8 h/d. DLDG1 is a homolog of the plasma membrane-localizing cyanobacterial proton-extrusion-protein A that is required for light-induced H+ extrusion and also shows similarity in its amino-acid sequence to that of Ycf10 encoded in the plastid genome. Arabidopsis DLDG1 enhances the growth-retardation phenotype of the Escherichia coli K+/H+ antiporter mutant, and the everted membrane vesicles of the E. coli expressing DLDG1 show the K+/H+ antiport activity. Our findings suggest that DLDG1 functionally interacts with Ycf10 to control H+ homeostasis in chloroplasts, which is important for the light-acclimation response, by optimizing the extent of NPQ.
Collapse
Affiliation(s)
- Kyohei Harada
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Takatoshi Arizono
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Ryoichi Sato
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Mai Duy Luu Trinh
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Akira Hashimoto
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| | - Masaru Kono
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, 113-0033 Japan
| | - Masaru Tsujii
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Sendai, 980-8579 Japan
| | - Nobuyuki Uozumi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Sendai, 980-8579 Japan
| | - Shinichi Takaichi
- Department of Molecular Microbiology, Faculty of Life Science, Tokyo University of Agriculture, Tokyo, 156-8502 Japan
| | - Shinji Masuda
- School of Life Science & Technology, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
- Center for Biological Resources & Informatics, Tokyo Institute of Technology, Yokohama, 226-8501 Japan
| |
Collapse
|
13
|
Trinh MDL, Sato R, Masuda S. Genetic characterization of a flap1 null mutation in Arabidopsis npq4 and pgr5 plants suggests that the regulatory role of FLAP1 involves the control of proton homeostasis in chloroplasts. PHOTOSYNTHESIS RESEARCH 2019; 139:413-424. [PMID: 30390180 DOI: 10.1007/s11120-018-0575-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Accepted: 08/24/2018] [Indexed: 05/21/2023]
Abstract
Precise control of the proton concentration gradient across thylakoid membranes (ΔpH) is essential for photosynthesis and its regulation because the gradient contributes to the generation of the proton motive force used for ATP synthesis and also for the fast and reversible induction of non-photochemical quenching (NPQ) to avoid photoinhibition and photodamage. However, the regulatory mechanism(s) controlling ΔpH in response to fluctuating light has not been fully elucidated. We previously described a new NPQ-regulatory chloroplastic protein, Fluctuating-Light-Acclimation Protein1 (FLAP1), which is important for plant growth and modulation of ΔpH under fluctuating light conditions. For this report, we further characterized FLAP1 activity by individually crossing an Arabidopsis flap1 mutant with npq4 and pgr5 plants; npq4 is defective in PsbS-dependent NPQ, and pgr5 is defective in induction of steady-state proton motive force (pmf) and energy-dependent quenching (qE). Both npq4 and npq4 flap1 exhibited similar NPQ kinetics and other photosynthetic parameters under constant or fluctuating actinic light. Conversely, pgr5 flap1 had recovered NPQ, photosystem II quantum yield and growth under fluctuating light, each of which was impaired in pgr5. Together with other data, we propose that FLAP1 activity controls proton homeostasis under steady-state photosynthesis to manipulate luminal acidification levels appropriately to balance photoprotection and photochemical processes.
Collapse
Affiliation(s)
- Mai Duy Luu Trinh
- Graduate School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, 226-8501, Japan
| | - Ryoichi Sato
- Graduate School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, 226-8501, Japan
- Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki, 444-8585, Japan
| | - Shinji Masuda
- Center for Biological Resources & Informatics, Tokyo Institute of Technology, Yokohama, 226-8501, Japan.
| |
Collapse
|
14
|
Sato R, Kawashima R, Trinh MDL, Nakano M, Nagai T, Masuda S. Significance of PGR5-dependent cyclic electron flow for optimizing the rate of ATP synthesis and consumption in Arabidopsis chloroplasts. PHOTOSYNTHESIS RESEARCH 2019; 139:359-365. [PMID: 29916043 DOI: 10.1007/s11120-018-0533-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Accepted: 06/09/2018] [Indexed: 05/11/2023]
Abstract
The proton motive force (PMF) across the chloroplast thylakoid membrane that is generated by electron transport during photosynthesis is the driving force for ATP synthesis in plants. The PMF mainly arises from the oxidation of water in photosystem II and from electron transfer within the cytochrome b6f complex. There are two electron transfer pathways related to PMF formation: linear electron flow and cyclic electron flow. Proton gradient regulation 5 (PGR5) is a major component of the cyclic electron flow pathway, and the Arabidopsis pgr5 mutant shows a substantial reduction in the PMF. How the PGR5-dependent cyclic electron flow contributes to ATP synthesis has not, however, been fully delineated. In this study, we monitored in vivo ATP levels in Arabidopsis chloroplasts in real time using a genetically encoded bioluminescence-based ATP indicator, Nano-lantern(ATP1). The increase in ATP in the chloroplast stroma of pgr5 leaves upon illumination with actinic light was significantly slower than in wild type, and the decrease in ATP levels when this illumination stopped was significantly faster in pgr5 leaves than in wild type. These results indicated that PGR5-dependent cyclic electron flow around photosystem I helps to sustain the rate of ATP synthesis, which is important for growth under fluctuating light conditions.
Collapse
Affiliation(s)
- Ryoichi Sato
- School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, 226-8501, Japan
- Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki, 444-8585, Japan
| | - Rinya Kawashima
- School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, 226-8501, Japan
| | - Mai Duy Luu Trinh
- School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, 226-8501, Japan
| | - Masahiro Nakano
- The Institute of Scientific and Industrial Research, Osaka University, Osaka, 567-0047, Japan
| | - Takeharu Nagai
- The Institute of Scientific and Industrial Research, Osaka University, Osaka, 567-0047, Japan
| | - Shinji Masuda
- Center for Biological Resources & Informatics, Tokyo Institute of Technology, Yokohama, 226-8501, Japan.
| |
Collapse
|