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Pacheco MA, Cepeda AS, Miller EA, Beckerman S, Oswald M, London E, Mateus-Pinilla NE, Escalante AA. A new long-read mitochondrial-genome protocol (PacBio HiFi) for haemosporidian parasites: a tool for population and biodiversity studies. Malar J 2024; 23:134. [PMID: 38704592 PMCID: PMC11069185 DOI: 10.1186/s12936-024-04961-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2024] [Accepted: 04/24/2024] [Indexed: 05/06/2024] Open
Abstract
BACKGROUND Studies on haemosporidian diversity, including origin of human malaria parasites, malaria's zoonotic dynamic, and regional biodiversity patterns, have used target gene approaches. However, current methods have a trade-off between scalability and data quality. Here, a long-read Next-Generation Sequencing protocol using PacBio HiFi is presented. The data processing is supported by a pipeline that uses machine-learning for analysing the reads. METHODS A set of primers was designed to target approximately 6 kb, almost the entire length of the haemosporidian mitochondrial genome. Amplicons from different samples were multiplexed in an SMRTbell® library preparation. A pipeline (HmtG-PacBio Pipeline) to process the reads is also provided; it integrates multiple sequence alignments, a machine-learning algorithm that uses modified variational autoencoders, and a clustering method to identify the mitochondrial haplotypes/species in a sample. Although 192 specimens could be studied simultaneously, a pilot experiment with 15 specimens is presented, including in silico experiments where multiple data combinations were tested. RESULTS The primers amplified various haemosporidian parasite genomes and yielded high-quality mt genome sequences. This new protocol allowed the detection and characterization of mixed infections and co-infections in the samples. The machine-learning approach converged into reproducible haplotypes with a low error rate, averaging 0.2% per read (minimum of 0.03% and maximum of 0.46%). The minimum recommended coverage per haplotype is 30X based on the detected error rates. The pipeline facilitates inspecting the data, including a local blast against a file of provided mitochondrial sequences that the researcher can customize. CONCLUSIONS This is not a diagnostic approach but a high-throughput method to study haemosporidian sequence assemblages and perform genotyping by targeting the mitochondrial genome. Accordingly, the methodology allowed for examining specimens with multiple infections and co-infections of different haemosporidian parasites. The pipeline enables data quality assessment and comparison of the haplotypes obtained to those from previous studies. Although a single locus approach, whole mitochondrial data provide high-quality information to characterize species pools of haemosporidian parasites.
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Affiliation(s)
- M Andreína Pacheco
- Biology Department/Institute of Genomics and Evolutionary Medicine (iGEM), Temple University, (SERC - 645), 1925 N. 12 St, Philadelphia, PA, 19122-1801, USA.
| | - Axl S Cepeda
- Biology Department/Institute of Genomics and Evolutionary Medicine (iGEM), Temple University, (SERC - 645), 1925 N. 12 St, Philadelphia, PA, 19122-1801, USA
| | - Erica A Miller
- University of Pennsylvania, Wildlife Futures Program, Kennett Square, Philadelphia, PA, 19348, USA
| | | | | | - Evan London
- Department of Animal Sciences, University of Illinois at Urbana-Champaign, Champaign, IL, 61801, USA
| | - Nohra E Mateus-Pinilla
- Department of Animal Sciences, University of Illinois at Urbana-Champaign, Champaign, IL, 61801, USA
- Illinois Natural History Survey-Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, IL, 61820, USA
- Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, Champaign, IL, 61820, USA
- Department of Pathobiology, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, IL, 61802, USA
| | - Ananias A Escalante
- Biology Department/Institute of Genomics and Evolutionary Medicine (iGEM), Temple University, (SERC - 645), 1925 N. 12 St, Philadelphia, PA, 19122-1801, USA.
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Ernest HB, Tell LA, Bishop CA, González AM, Lumsdaine ER. Illuminating the Mysteries of the Smallest Birds: Hummingbird Population Health, Disease Ecology, and Genomics. Annu Rev Anim Biosci 2024; 12:161-185. [PMID: 38358836 DOI: 10.1146/annurev-animal-021022-044308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
Abstract
Hummingbirds share biologically distinctive traits: sustained hovering flight, the smallest bird body size, and high metabolic rates fueled partially by nectar feeding that provides pollination to plant species. Being insectivorous and sometimes serving as prey to larger birds, they fulfill additional important ecological roles. Hummingbird species evolved and radiated into nearly every habitat in the Americas, with a core of species diversity in South America. Population declines of some of their species are increasing their risk of extinction. Threats to population health and genetic diversity are just beginning to be identified, including diseases and hazards caused by humans. We review the disciplines of population health, disease ecology, and genomics as they relate to hummingbirds. We appraise knowledge gaps, causes of morbidity and mortality including disease, and threats to population viability. Finally, we highlight areas of research need and provide ideas for future studies aimed at facilitating hummingbird conservation.
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Affiliation(s)
- Holly B Ernest
- Department of Veterinary Sciences, University of Wyoming, Laramie, Wyoming, USA;
- School of Veterinary Medicine, University of California, Davis, California, USA; ,
| | - Lisa A Tell
- School of Veterinary Medicine, University of California, Davis, California, USA; ,
| | - Christine A Bishop
- Environment and Climate Change Canada, Delta, British Columbia, Canada; ,
| | - Ana M González
- Environment and Climate Change Canada, Delta, British Columbia, Canada; ,
| | - Emily R Lumsdaine
- School of Veterinary Medicine, University of California, Davis, California, USA; ,
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Vieira LMDC, Pereira PHO, Vilela DADR, Landau I, Pacheco MA, Escalante AA, Ferreira FC, Braga ÉM. Leucocytozoon cariamae n. sp. and Haemoproteus pulcher coinfection in Cariama cristata (Aves: Cariamiformes): first mitochondrial genome analysis and morphological description of a leucocytozoid in Brazil. Parasitology 2023; 150:1296-1306. [PMID: 37655743 PMCID: PMC10941214 DOI: 10.1017/s0031182023000811] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 08/16/2023] [Accepted: 08/21/2023] [Indexed: 09/02/2023]
Abstract
The distribution of avian haemosporidians of the genus Leucocytozoon in the Neotropics remains poorly understood. Recent studies confirmed their presence in the region using molecular techniques alone, but evidence for gametocytes and data on putative competent hosts for Leucocytozoon are still lacking outside highland areas. We combined morphological and molecular data to characterize a new Leucocytozoon species infecting a non-migratory red-legged seriema (Cariama cristata), the first report of a competent host for Leucocytozoon in Brazil. Leucocytozoon cariamae n. sp. is distinguished from the Leucocytozoon fringillinarum group by its microgametocytes that are not strongly appressed to the host cell nucleus. The bird studied was coinfected with Haemoproteus pulcher, and we present a Bayesian phylogenetic analysis based on nearly complete mitochondrial genomes of these 2 parasites. Leucocytozoon cariamae n. sp. morphology is consistent with our phylogenetic analysis indicating that it does not share a recent common ancestor with the L. fringillinarum group. Haemoproteus pulcher and Haemoproteus catharti form a monophyletic group with Haemocystidium parasites of Reptilia, supporting the polyphyly of the genus Haemoproteus. We also discussed the hypothesis that H. pulcher and H. catharti may be avian Haemocystidium, highlighting the need to study non-passerine parasites to untangle the systematics of Haemosporida.
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Affiliation(s)
- Lis Marques de C Vieira
- Departamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
| | - Pedro Henrique O Pereira
- Departamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
| | - Daniel Ambrózio da Rocha Vilela
- Centro de Triagem de Animais Silvestres, Instituto Brasileiro do Meio Ambiente e dos Recursos Naturais não Renováveis, Belo Horizonte, MG, Brazil
| | - Irène Landau
- Muséum Nation d'Histoire Naturelle, UMR7245, Molécules de Communication et Adaptation des Microorganismes, Paris, France
| | - M Andreína Pacheco
- Biology Department, Institute of Genomics and Evolutionary Medicine (iGEM), Temple University, Philadelphia, PA, USA
| | - Ananias A Escalante
- Biology Department, Institute of Genomics and Evolutionary Medicine (iGEM), Temple University, Philadelphia, PA, USA
| | - Francisco C Ferreira
- Department of Entomology, Texas A&M University, College Station, TX, USA
- Schubot Center for Avian Health, Department of Veterinary Pathobiology, Texas A&M University, College Station, TX, USA
| | - Érika Martins Braga
- Departamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
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Chagas CRF, Duc M, Gutiérrez-Liberato GA, Valkiūnas G. Host Cells of Leucocytozoon (Haemosporida, Leucocytozoidae) Gametocytes, with Remarks on the Phylogenetic Importance of This Character. Pathogens 2023; 12:pathogens12050712. [PMID: 37242382 DOI: 10.3390/pathogens12050712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 05/06/2023] [Accepted: 05/11/2023] [Indexed: 05/28/2023] Open
Abstract
Leucocytozoon parasites remain poorly investigated in comparison to other haemosporidians. The host cell inhabited by their blood stages (gametocytes) remains insufficiently known. This study aimed to determine the blood cells inhabited by Leucocytozoon gametocytes in different species of Passeriformes and to test if this feature has a phylogenetic importance. We microscopically analyzed blood films stained with Giemsa from six different bird species and individuals and used PCR-based methods for parasite lineage identification. The DNA sequences obtained were applied for phylogenetic analysis. Leucocytozoon parasite from the song thrush Turdus philomelos (cytochrome b lineage STUR1), the blackbird Turdus merula (undetermined lineage), the garden warbler Sylvia borin (unknown lineage) inhabited erythrocytes, a parasite from the blue tit Cyanistes caeruleus (PARUS4) infects lymphocytes, while in the wood warbler Phylloscopus sibilatrix (WW6) and the common chiffchaff Phylloscopus collybita (AFR205) they were found inhabiting thrombocytes. Parasites infecting thrombocytes were closely related, while the parasites infecting erythrocytes were placed in three different clades, and the one found in lymphocytes was placed in a separate clade. This shows that the determination of host cells inhabited by Leucocytozoon parasites can be phylogenetically important and should be considered in future species descriptions. Noteworthy, phylogenetic analysis might be used for the prediction of which host cells parasite lineages might inhabit.
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Affiliation(s)
| | - Mélanie Duc
- Nature Research Centre, 01109 Vilnius, Lithuania
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Valkiūnas G, Iezhova TA. Insights into the Biology of Leucocytozoon Species (Haemosporida, Leucocytozoidae): Why Is There Slow Research Progress on Agents of Leucocytozoonosis? Microorganisms 2023; 11:1251. [PMID: 37317225 DOI: 10.3390/microorganisms11051251] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Revised: 05/04/2023] [Accepted: 05/05/2023] [Indexed: 06/16/2023] Open
Abstract
Blood parasites of the genus Leucocytozoon (Leucocytozoidae) only inhabit birds and represent a readily distinct evolutionary branch of the haemosporidians (Haemosporida, Apicomplexa). Some species cause pathology and even severe leucocytozoonosis in avian hosts, including poultry. The diversity of Leucocytozoon pathogens is remarkable, with over 1400 genetic lineages detected, most of which, however, have not been identified to the species level. At most, approximately 45 morphologically distinct species of Leucocytozoon have been described, but only a few have associated molecular data. This is unfortunate because basic information about named and morphologically recognized Leucocytozoon species is essential for a better understanding of phylogenetically closely related leucocytozoids that are known only by DNA sequence. Despite much research on haemosporidian parasites during the past 30 years, there has not been much progress in taxonomy, vectors, patterns of transmission, pathogenicity, and other aspects of the biology of these cosmopolitan bird pathogens. This study reviewed the available basic information on avian Leucocytozoon species, with particular attention to some obstacles that prevent progress to better understanding the biology of leucocytozoids. Major gaps in current Leucocytozoon species research are discussed, and possible approaches are suggested to resolve some issues that have limited practical parasitological studies of these pathogens.
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Haemosporidians in Non-Passerine Birds of Colombia: An Overview of the Last 20 Years of Research. DIVERSITY 2023. [DOI: 10.3390/d15010057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The Neotropics are highly diverse in avian species. Neotropical countries contribute a large part of the estimated diversity of haemosporidian parasites reported for the planet’s tropical zones. However, sampling is limited and biased, illustrated by only 30% of the genetic records (barcodes) from non-passerines, most of them not linked to a nominal species. This paper aimed to perform the molecular and morphological characterization of the haemosporidians that infect non-passerine birds from Colombia deposited in the biological collection named “Grupo de Estudio Relación Parásito Hospedero (GERPH)”. We analyzed 1239 samples from twelve biomes and two animal care facilities. Phylogenetic relationships using barcodes and mitochondrial genomes were estimated. In addition, the reports of haemosporidian infections in non-passerine birds from the Neotropics recorded after 1978 were summarized. We reported the presence of thirteen morphological haemosporidian species, four potential new species deposited in GERPH, a host range expansion for two Plasmodium species, and a barcode sequence for Haemoproteus caprimulgi. We confirmed the species associated with 56 molecular lineages reported in other neotropical countries at the genus level. Thus, biological collections and curated databases such as MalAvi are essential to support integrative approaches demanded in modern taxonomy.
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Chavarría X, Matta NE, Cadena-Ortíz H, Alarcón I, Bahamonde-Vinueza D, González AD, Bonaccorso E. Haemosporidian parasites in the ash-breasted Sierra finch ( Geospizopsis plebejus): insights from an Andean dry forest population. Parasitology 2022; 150:1-14. [PMID: 36345570 PMCID: PMC10090645 DOI: 10.1017/s0031182022001603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 10/20/2022] [Accepted: 10/26/2022] [Indexed: 12/12/2022]
Abstract
Haemosporidian genera Plasmodium, Haemoproteus and Leucocytozoon, responsible for avian malarial infections, are highly diverse and have a wide range of health effects and predictors, depending on the host and its environmental context. Here, we present, for the first time, detailed information on the identity, prevalence and parasitaemia of haemosporidians and other haemoparasites that infect the ash-breasted Sierra finch, Geospizopsis plebejus, in an Andean dry forest. We study the consequences of infection in the host body and health conditions and explore the environmental and intrinsic factors that influence infection status and parasitaemia. We conducted diagnoses by cytochrome b (cytb) sequencing and morphological identification, and estimated the levels of parasitaemia based on microscopy. We identified 6 cytb lineages infecting G. plebejus. Two of them were new lineages: Haemoproteus sp. GEPLE01 and GEPLE02. We also detected Haemoproteus sp. ZOCAP08, Haemoproteus sp. AMAVIR01, Plasmodium homopolare BAEBIC02 and Plasmodium cathemerium ZONCAP15. By microscopy, we detected Haemoproteus coatneyi, Haemoproteus erythrogravidus, P. homopolare and other unidentified species of Haemoproteus, Plasmodium, Babesia sp. and 1 microfilaria. We found no evidence of Leucocytozoon. Additionally, we detected several coinfections by sequencing and microscopy. The prevalence of haemosporidian infections was high (87.7%), and the mean parasitaemia was 61.65 infected cells per 10 000 erythrocytes examined. Prevalence and parasitaemia were higher for Haemoproteus than for Plasmodium. Haemoproteus sp. AMAVIR01 showed the highest prevalence (43.1%) and mean parasitaemia (94.39/10 000 erythrocytes) and might be associated with H. coatneyi. Immature individuals showed a lower prevalence than adults, supporting previous findings.
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Affiliation(s)
- Xavier Chavarría
- Laboratorio de Biología Evolutiva, Instituto Biósfera y Colegio de Ciencias Biológicas y Ambientales, Universidad San Francisco de Quito, Quito, Ecuador
| | - Nubia E. Matta
- Departamento de Biología, Universidad Nacional de Colombia, Sede Bogotá, Colombia
| | - Héctor Cadena-Ortíz
- Centro de Investigación de la Biodiversidad y Cambio Climático (BioCamb), Universidad Tecnológica Indoamérica, Machala y Sabanilla, Quito EC170301, Ecuador
| | - Ibeth Alarcón
- Centro de Investigación de la Biodiversidad y Cambio Climático (BioCamb), Universidad Tecnológica Indoamérica, Machala y Sabanilla, Quito EC170301, Ecuador
- Universidad Central del Ecuador, Av. Universitaria, Quito, Ecuador
| | - Daniela Bahamonde-Vinueza
- Centro de Investigación de la Biodiversidad y Cambio Climático (BioCamb), Universidad Tecnológica Indoamérica, Machala y Sabanilla, Quito EC170301, Ecuador
| | - Angie D. González
- Departamento de Biología, Universidad Nacional de Colombia, Sede Bogotá, Colombia
| | - Elisa Bonaccorso
- Laboratorio de Biología Evolutiva, Instituto Biósfera y Colegio de Ciencias Biológicas y Ambientales, Universidad San Francisco de Quito, Quito, Ecuador
- Centro de Investigación de la Biodiversidad y Cambio Climático (BioCamb), Universidad Tecnológica Indoamérica, Machala y Sabanilla, Quito EC170301, Ecuador
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Carvalho AM, Ferreira FC, Araújo AC, Hirano LQL, Paludo GR, Braga ÉM. Molecular detection of Leucocytozoon in red-legged seriemas (Cariama cristata), a non-migratory bird species in the Brazilian Cerrado. Vet Parasitol Reg Stud Reports 2022; 31:100652. [PMID: 35569906 DOI: 10.1016/j.vprsr.2021.100652] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 09/23/2021] [Accepted: 09/30/2021] [Indexed: 06/15/2023]
Abstract
Avian Haemosporidian parasites - Plasmodium, Haemoproteus, Leucocytozoon and Fallisia - have a wide distribution except for Antarctica. Leucocytozoon sp. has been poorly described in Brazil, and few studies have indicated infections in birds from the Atlantic Forest, Pantanal, Pampa and Amazon biomes. This study describes, for the first time, the occurrence of Leucocytozoon infection in red-legged seriemas (Cariama cristata) in the Brazilian savanna (Cerrado biome) using molecular diagnosis. Leucocytozoon spp. lineage CARCRI01 was detected in three C. cristata, a non-migratory bird, confirming transmission in mid-elevation areas in central Brazil. Further studies are needed to certify whether infections in red-legged seriemas were not abortive and to elucidate Leucocytozoon infection at low altitudes in the Brazilian lands.
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Affiliation(s)
- Andréa M Carvalho
- Laboratório de Patologia Clínica Veterinária e Diagnóstico Molecular, Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília, DF, Brazil
| | - Francisco C Ferreira
- Center for Conservation Genomics, Smithsonian Conservation Biology Institute, NW, Washington, USA; Center for Vector Biology, Rutgers University, New Brunswick, NJ, USA
| | - Andreina C Araújo
- Departamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
| | - Líria Queiroz Luz Hirano
- Setor de Animais Silvestres, Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília, DF, Brazil
| | - Giane Regina Paludo
- Laboratório de Patologia Clínica Veterinária e Diagnóstico Molecular, Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília, DF, Brazil
| | - Érika Martins Braga
- Departamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil.
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Mackenzie AM, Dudenhoeffer M, Bangoura B, Sehgal RNM, Tell LA, Godwin BL, Ernest HB. Prevalence and diversity of haemosporidians in a migratory high-elevation hummingbird in North America. Parasitol Res 2022; 121:769-773. [PMID: 35048210 DOI: 10.1007/s00436-021-07407-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 12/09/2021] [Indexed: 12/01/2022]
Abstract
Hummingbirds (Trochilidae) are sensitive to environmental changes because of their extraordinary ecology, metabolism, and the highest red blood cell counts found in any vertebrate. These physiological attributes may render hummingbirds particularly susceptible to the effects of haemosporidian (blood parasite) infections. Much of the research on haemosporidians in hummingbirds has been conducted in South America; less is known about haemosporidian diversity and prevalence in North America. We sought to determine the prevalence and diversity of haemosporidians in a high-elevation species, the Broad-tailed Hummingbird (Selasphorus platycercus). Blood samples (N = 314) from 25 sites in Colorado and Wyoming were screened for haemosporidians using microscopy (n = 311) and PCR (n = 301). Both microscopy and sequencing diagnostic techniques detected haemosporidians in the same 5 hummingbirds, with an overall prevalence of 1.59%. Positive samples were sequenced at the cytochrome b gene and identified Haemoproteus archilochus and two Haemoproteus sp. not previously detected in North America. No parasites of the genera Plasmodium or Leucocytozoon were detected. Our study provides the first report of the prevalence and diversity of haemosporidians in Broad-tailed Hummingbirds in the Rocky Mountains.
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Affiliation(s)
- Adrienne M Mackenzie
- Department of Veterinary Sciences, Wildlife Genomics and Disease Ecology Laboratory, University of Wyoming, Laramie, WY, USA
| | - Megan Dudenhoeffer
- Department of Veterinary Sciences, Wildlife Genomics and Disease Ecology Laboratory, University of Wyoming, Laramie, WY, USA
| | - Berit Bangoura
- Department of Veterinary Sciences, University of Wyoming, Laramie, WY, USA
| | - Ravinder N M Sehgal
- Department of Biology, San Francisco State University, San Francisco, CA, USA
| | - Lisa A Tell
- Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California, Davis, CA, USA
| | - Braden L Godwin
- Department of Veterinary Sciences, Wildlife Genomics and Disease Ecology Laboratory, University of Wyoming, Laramie, WY, USA
| | - Holly B Ernest
- Department of Veterinary Sciences, Wildlife Genomics and Disease Ecology Laboratory, University of Wyoming, Laramie, WY, USA.
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Duarte Moreno AN, Villamizar Escalante D, Rondón González F. Detección por PCR de Haemoproteus archilochus en Amazilia tzacatl (Trochilidae) en Colombia. ACTA BIOLÓGICA COLOMBIANA 2021. [DOI: 10.15446/abc.v27n1.89162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
La infección causada por haemosporidios en colibríes no ha sido estudiada en zonas agroforestales o urbanas de la vertiente occidental de la Cordillera Oriental de los Andes en el departamento de Santander, pese a existir evidencia de esta en otros grupos de aves. Con el fin de detectar e identificar los parásitos causales de infecciones por haemosporidios, se tomaron muestras de sangre de la vena yugular de colibríes en seis localidades. La presencia de infección se llevó a cabo por PCR y la identificación de los parásitos se hizo a partir de secuencias del gen mitocondrial Citocromo b (Cyt b). Se obtuvieron 86 muestras de sangre de 20 especies de colibríes. La prevalencia de infección en general fue del 43 % y en el 18 % de las muestras infectadas del colibrí Amazilia colirufa (Amazilia tzacatl) se identificaron secuencias de Haemoproteus archilochus correspondientes al linaje HUMHA4. Se reporta por primera vez para Colombia la presencia de H. archilochus en A. tzacatl, por medio de técnicas de biología molecular. Este parásito podría estar implicado en la haemoproteosis de colibríes en el país.
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Galvin AN, Bradshaw AC, Myers BM, Tell LA, Ernest HB, Sehgal RNM. LOW PREVALENCE OF HAEMOSPORIDIANS IN BLOOD AND TISSUE SAMPLES FROM HUMMINGBIRDS. J Parasitol 2021; 107:794-798. [PMID: 34643697 DOI: 10.1645/20-168] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
Hummingbirds are vital members of terrestrial ecosystems, and because of their high metabolic requirements, they serve as indicators of ecosystem health. Monitoring the parasitic infections of hummingbirds is thus especially important. Haemosporidians, a widespread group of avian blood parasites, are known to infect hummingbirds, but little is known about the prevalence and diversity of these parasites in hummingbirds. The prevalence of haemosporidians in several hummingbird species was examined and we compared 4 different tissue types in detecting parasites by polymerase chain reaction (PCR). Blood samples from 339 individuals of 3 different hummingbird species were tested, and 4 individuals were found positive for haemosporidian infection, a prevalence of 1.2%. Hummingbird carcasses (n = 70) from 5 different hummingbird species were also sampled to assess differences in detection success of haemosporidians in heart, kidney, liver, and pectoral muscle tissue samples. Detection success was similar among tissue types, with haemosporidian prevalence of 9.96% in heart tissue, 9.52% in kidney tissue, 10.76% in liver tissue, and 11.76% in pectoral muscle tissue. All tissue samples positive for haemosporidian infection were from the Black-chinned Hummingbird (Archilochus alexandri). Possible reasons for low prevalence of these blood parasites could include low susceptibility to insect vectors or parasite incompatibility in these hummingbirds.
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Affiliation(s)
- A N Galvin
- Department of Biology, 1600 Holloway Avenue, San Francisco State University, San Francisco, California 94132
| | - A C Bradshaw
- Department of Biology, 1600 Holloway Avenue, San Francisco State University, San Francisco, California 94132
| | - B M Myers
- California State Polytechnic University Pomona, 3801 West Temple Avenue, Pomona, California 91768
| | - L A Tell
- Department of Medicine and Epidemiology, School of Veterinary Medicine, 1 Shields Avenue, University of California, Davis, California 95616
| | - H B Ernest
- Wildlife Genomics and Disease Ecology Laboratory, Department of Veterinary Sciences and Program in Ecology, University of Wyoming, Laramie, Wyoming 82071
| | - R N M Sehgal
- Department of Biology, 1600 Holloway Avenue, San Francisco State University, San Francisco, California 94132
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Evolutionary ecology, taxonomy, and systematics of avian malaria and related parasites. Acta Trop 2020; 204:105364. [PMID: 32007445 DOI: 10.1016/j.actatropica.2020.105364] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2019] [Revised: 01/27/2020] [Accepted: 01/28/2020] [Indexed: 12/25/2022]
Abstract
Haemosporidian parasites of the genera Plasmodium, Leucocytozoon, and Haemoproteus are one of the most prevalent and widely studied groups of parasites infecting birds. Plasmodium is the most well-known haemosporidian as the avian parasite Plasmodium relictum was the original transmission model for human malaria and was also responsible for catastrophic effects on native avifauna when introduced to Hawaii. The past two decades have seen a dramatic increase in research on avian haemosporidian parasites as a model system to understand evolutionary and ecological parasite-host relationships. Despite haemosporidians being one the best studied groups of avian parasites their specialization among avian hosts and variation in prevalence amongst regions and host taxa are not fully understood. In this review we focus on describing the current phylogenetic and morphological diversity of haemosporidian parasites, their specificity among avian and vector hosts, and identifying the determinants of haemosporidian prevalence among avian species. We also discuss how these parasites might spread across regions due to global climate change and the importance of avian migratory behavior in parasite dispersion and subsequent diversification.
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Cuevas E, Vianna JA, Botero-Delgadillo E, Doussang D, González-Acuña D, Barroso O, Rozzi R, Vásquez RA, Quirici V. Latitudinal gradients of haemosporidian parasites: Prevalence, diversity and drivers of infection in the Thorn-tailed Rayadito ( Aphrastura spinicauda). INTERNATIONAL JOURNAL FOR PARASITOLOGY-PARASITES AND WILDLIFE 2019; 11:1-11. [PMID: 31879589 PMCID: PMC6920315 DOI: 10.1016/j.ijppaw.2019.11.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Revised: 11/02/2019] [Accepted: 11/03/2019] [Indexed: 01/15/2023]
Abstract
Latitudinal gradients are well-suited systems that may be helpful explaining distribution of haemosporidian parasites and host susceptibility. We studied the prevalence, diversity and drivers of haemosporidian parasites (Leucocytozoon, Plasmodium and Haemoproteus) along a latitudinal gradient (30°–56° S), that encompass the total distribution (~3,000 km) of the Thorn-tailed Rayadito (Aphrastura spinicauda) in the South American temperate forests from Chile. We analyzed 516 individuals from 18 localities between 2010 and 2017 and observed an overall prevalence of 28.3% for haemosporidian parasites. Leucocytozoon was the most prevalent parasite (25.8%). We recorded 19 distinct lineages (13 for Leucocytozoon, five for Plasmodium, and one for Haemoproteus). Differences in haemosporidian prevalence and diversity by genus and type of habitat were observed in the latitudinal gradient. Further, we support the existence of a latitudinal associate distribution of Leucocytozoids in South America, where prevalence and diversity increase toward higher latitudes. Distribution of Leucocytozoon was associated with sub-antarctic habitat (higher latitude) and explained by cold temperature and high precipitation. On the other hand, we lacked to find a latitudinal associate pattern for Plasmodium and Haemoproteus, however low prevalence and high diversity were recorded in areas considered as a hotspot of biodiversity in Central Chile. Our findings confirmed the importance of habitat and climatic variables explaining prevalence, diversity and distribution of haemosporidian parasites in a huge latitudinal gradient, belonging the distribution of the Thorn-tailed Rayadito in the world's southernmost forests ecosystems. Prevalence and diversity differed between haemosporidian genera and habitats in the latitudinal gradient. Leucocytozoon was the most prevalent genus in the latitudinal distribution. Leucocytozoon prevalence and diversity were associated to higher latitudes. Distribution of Leucocytozoon was explained by cold temperature and high precipitation.
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Affiliation(s)
- Elfego Cuevas
- Programa de Doctorado en Medicina de la Conservación, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago, Chile.,Centro de Investigación para la Sustentabilidad (CIS), Universidad Andres Bello, Santiago, Chile
| | - Juliana A Vianna
- Departamento de Ecosistemas y Medio Ambiente, Facultad de Agronomía e Ingeniería Forestal, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Esteban Botero-Delgadillo
- Instituto de Ecología y Biodiversidad, Facultad de Ciencias, Universidad de Chile, Santiago, Chile.,SELVA: Research for Conservation in the Neotropics, Bogotá, Colombia.,Department of Behavioral Ecology and Evolutionary Genetics, Max Plank Institute for Ornithology, Seewiesen, Germany
| | - Daniela Doussang
- Laboratorio de Parásitos y Enfermedades de Fauna Silvestre, Facultad de Ciencias Veterinarias, Universidad de Concepción, Chillán, Chile.,Facultad de Ciencias de la Vida, Universidad Andres Bello, Viña Del Mar, Chile
| | - Daniel González-Acuña
- Laboratorio de Parásitos y Enfermedades de Fauna Silvestre, Facultad de Ciencias Veterinarias, Universidad de Concepción, Chillán, Chile
| | - Omar Barroso
- Instituto de Ecología y Biodiversidad, Parque Etnobotánico Omora, Universidad de Magallanes, Puerto Williams, Chile
| | - Ricardo Rozzi
- Instituto de Ecología y Biodiversidad, Parque Etnobotánico Omora, Universidad de Magallanes, Puerto Williams, Chile
| | - Rodrigo A Vásquez
- Instituto de Ecología y Biodiversidad, Facultad de Ciencias, Universidad de Chile, Santiago, Chile
| | - Verónica Quirici
- Centro de Investigación para la Sustentabilidad (CIS), Universidad Andres Bello, Santiago, Chile.,Departamento de Ecología y Biodiversidad, Universidad Andres Bello, Santiago, Chile
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Lotta IA, Valkiūnas G, Pacheco MA, Escalante AA, Hernández SR, Matta NE. Disentangling Leucocytozoon parasite diversity in the neotropics: Descriptions of two new species and shortcomings of molecular diagnostics for leucocytozoids. Int J Parasitol Parasites Wildl 2019; 9:159-173. [PMID: 31193389 PMCID: PMC6526250 DOI: 10.1016/j.ijppaw.2019.05.002] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 05/07/2019] [Accepted: 05/07/2019] [Indexed: 01/04/2023]
Abstract
Avian communities from South America harbor an extraordinary diversity of Leucocytozoon species (Haemosporida, Leucocytozoidae). Here, of 890 birds sampled, 10 (1.2%) were infected with Leucocytozoon parasites. Among them, two new species were discovered and described. Leucocytozoon grallariae sp. nov. and Leucocytozoon neotropicalis sp. nov. were found in non-migratory highland passeriforms belonging to the Grallaridae and Cotingidae, respectively. They both possess gametocytes in fusiform host cells. However, due to combining microscopic examination and molecular detection, it was revealed that these parasites were present in co-infections with other Leucocytozoon species, which gametocytes develop in roundish host cells, therefore exhibiting two highly distant parasite lineages isolated from the same samples. Remarkably, the lineages obtained by cloning the mtDNA genomes were not captured by the classic nested PCR, which amplifies a short fragment of cytochrome b gene. Phylogenetic analyses revealed that the lineages obtained by the classic nested PCR clustered with parasites possessing gametocytes in roundish host cells, while the lineages obtained by the mtDNA genome PCR protocol were closely related to Leucocytozoon parasites possessing gametocytes in fusiform host cells. These findings suggest problems with the sensitivity of the molecular protocols commonly used to detect Leucocytozoon species. A detailed analysis of the primers used in the classic nested PCR revealed a match with DNA sequences from those parasites that possess gametocytes in roundish host cells (i.e., Leucocytozoon fringillinarum), while they differ with the orthologous regions in the mtDNA genomes isolated from the samples containing the two new species. Since these are mixed infections, none of the lineages detected in this study can be assigned accurately to the new Leucocytozoon morphospecies that develops in fusiform host cells. However, phylogenetic analyses allowed us to hypothesize their most probable associations. This study highlights the need for developing detection methods to assess the diversity of Leucocytozoon parasites accurately.
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Affiliation(s)
- Ingrid A. Lotta
- Universidad Nacional de Colombia - Sede Bogotá- Facultad de Ciencias - Departamento de Biología - Grupo de Investigación Caracterización Genética e Inmunología, Carrera 30 No. 45-03, Bogotá, 111321, Colombia
| | - Gediminas Valkiūnas
- Institute of Ecology, Nature Research Centre, Akademijos 2, Vilnius-21, LT, 08412, Lithuania
| | - M. Andreína Pacheco
- Institute for Genomics and Evolutionary Medicine (iGEM), Temple University, Philadelphia, PA, USA
| | - Ananías A. Escalante
- Institute for Genomics and Evolutionary Medicine (iGEM), Temple University, Philadelphia, PA, USA
| | - Sandra Rocío Hernández
- Universidad Nacional de Colombia - Sede Bogotá- Facultad de Ciencias - Departamento de Biología - Grupo de Investigación Caracterización Genética e Inmunología, Carrera 30 No. 45-03, Bogotá, 111321, Colombia
- Red de Biología y Conservación de Vertebrados, Instituto de Ecología A.C., Xalapa, Veracruz, Mexico
| | - Nubia E. Matta
- Universidad Nacional de Colombia - Sede Bogotá- Facultad de Ciencias - Departamento de Biología - Grupo de Investigación Caracterización Genética e Inmunología, Carrera 30 No. 45-03, Bogotá, 111321, Colombia
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15
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Fecchio A, Collins MD, Bell JA, García-Trejo EA, Sánchez-González LA, Dispoto JH, Rice NH, Weckstein JD. Bird Tissues from Museum Collections are Reliable for Assessing Avian Haemosporidian Diversity. J Parasitol 2019. [DOI: 10.1645/18-130] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Affiliation(s)
- Alan Fecchio
- Laboratório de Evolução e Biogeografia, Universidade Federal da Bahia, Salvador, BA 40170115, Brazil
| | | | - Jeffrey A. Bell
- Department of Biology, University of North Dakota, Grand Forks, North Dakota 58201
| | - Erick A. García-Trejo
- Unidad de Informática para la Biodiversidad, UniCiencias. Departamento Biología Evolutiva, Facultad de Ciencias, Universidad Nacional Autónoma de México, Ciudad de México, 04510, Mexico
| | - Luis A. Sánchez-González
- Museo de Zoología “Alfonso L. Herrera”, Depto. de Biología Evolutiva, Facultad de Ciencias, Universidad Nacional Autónoma de México. Apdo. Postal 70-399, Ciudad de México, 04510, Mexico
| | - Janice H. Dispoto
- Department of Ornithology, Academy of Natural Sciences of Drexel University, Philadelphia, Pennsylvania 19103
| | - Nathan H. Rice
- Department of Ornithology, Academy of Natural Sciences of Drexel University, Philadelphia, Pennsylvania 19103
| | - Jason D. Weckstein
- Department of Ornithology, Academy of Natural Sciences of Drexel University, Philadelphia, Pennsylvania 19103
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16
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González-García JM, Lara C, Quesada J, Chávez-Zichinelli CA, Serrano-Meneses MA. Superciliums in white-eared hummingbirds as badges of status signaling dominance. Naturwissenschaften 2018; 105:31. [PMID: 29616351 DOI: 10.1007/s00114-018-1553-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Revised: 03/07/2018] [Accepted: 03/09/2018] [Indexed: 10/17/2022]
Abstract
The role of badges as indicators of contest ability has been previously described. In hummingbirds, the exhibition of a badge is expected to save energy expenditure in agonistic interactions and to favor energy intake. Here, we investigate whether variable supercilium size in the white-eared hummingbird has a role in dominance status signaling. Firstly, 45 hummingbird males were captured and their superciliums were photographed to investigate variation in size and any possible allometric relationships. Secondly, 42 male birds were used to analyze whether the supercilium has a role in dominance status signaling in a dyadic contest. We found that supercilium size varied continuously but that despite variability between individuals, there was no relationship between supercilium size and body size. However, our dyad experiment indicated that birds with larger badges were able to make more visits to the feeders than individuals with smaller badges. We suggest a status signaling function of the supercilium.
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Affiliation(s)
- Juan Manuel González-García
- Doctorado en Ciencias Biológicas, Universidad Autónoma de Tlaxcala, Carretera Tlaxcala Km 1.5, 90070, Puebla, Tlaxcala, Mexico
| | - Carlos Lara
- Centro de Investigación en Ciencias Biológicas, Universidad Autónoma de Tlaxcala, Km 10.5 Autopista Tlaxcala-San Martín Texmelucan, San Felipe Ixtacuixtla, 90120, Tlaxcala, Mexico.
| | - Javier Quesada
- Natural History Museum of Barcelona, Chordates Laboratory, Passeig Picasso s/n, 08003, Barcelona, Spain
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17
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Bradshaw AC, Tell LA, Ernest HB, Bahan S, Carlson J, Sehgal RNM. Detection and prevalence of Haemoproteus archilochus (Haemosporida, Haemoproteidae) in two species of California hummingbirds. Parasitol Res 2017; 116:1879-1885. [PMID: 28534106 DOI: 10.1007/s00436-017-5463-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2017] [Accepted: 04/25/2017] [Indexed: 10/19/2022]
Abstract
Haemosporidian blood parasites are transmitted to a wide range of avian hosts via blood-sucking dipteran vectors. Microscopy has revealed an impressive diversity of avian haemosporidia with more than 250 species described. Moreover, PCR and subsequent sequence analyses have suggested a much greater diversity of haemosporidia than morphological analyses alone. Given the importance of these parasites, very few studies have focused on the charismatic hummingbirds. To date, three Haemoproteus species (Haemoproteus archilochus, Haemoproteus trochili, and Haemoproteus witti) and one Leucocytozoon species (Leucocytozoon quynzae) have been described in blood samples taken from hummingbirds (Trochilidae). Unconfirmed Plasmodium lineages have also been detected in hummingbirds. Here, we report the detection of H. archilochus in two hummingbird species (Calypte anna and Archilochus alexandri) sampled in Northern California and perform a phylogenetic analysis of mitochondrial cytochrome b (cyt b) gene lineages. A total of 261 hummingbirds (157 C. anna, 104 A. alexandri) were sampled and screened for blood parasites using PCR and microscopy techniques. Combining both methods, 4 (2.55%) haemosporidian infections were detected in C. anna and 18 (17.31%) haemosporidian infections were detected in A. alexandri. Molecular analyses revealed four distinct H. archilocus cyt b lineages, which clustered as a monophyletic clade. No species of Plasmodium or Leucocytozoon were detected in this study, raising the possibility of specific vector associations with hummingbirds. These results provide resources for future studies of haemosporidian prevalence, diversity, and pathogenicity in California hummingbird populations.
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Affiliation(s)
- A C Bradshaw
- Department of Biology, San Francisco State University, San Francisco, CA, USA
| | - L A Tell
- Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California at Davis, 1 Shields Avenue, Davis, CA, USA
| | - H B Ernest
- Department of Population Health and Reproduction, School of Veterinary Medicine, University of California at Davis, 1 Shields Avenue, Davis, CA, USA.,Department of Veterinary Sciences, University of Wyoming, Laramie, WY, USA
| | - S Bahan
- Department of Population Health and Reproduction, School of Veterinary Medicine, University of California at Davis, 1 Shields Avenue, Davis, CA, USA
| | - J Carlson
- Department of Entomology, University of California at Davis, 1 Shields Avenue, Davis, CA, USA
| | - R N M Sehgal
- Department of Biology, San Francisco State University, San Francisco, CA, USA.
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18
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Lotta IA, Pacheco MA, Escalante AA, González AD, Mantilla JS, Moncada LI, Adler PH, Matta NE. Leucocytozoon Diversity and Possible Vectors in the Neotropical highlands of Colombia. Protist 2016; 167:185-204. [DOI: 10.1016/j.protis.2016.02.002] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2015] [Revised: 02/01/2016] [Accepted: 02/02/2016] [Indexed: 10/22/2022]
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19
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Coral AA, Valkiūnas G, González AD, Matta NE. In vitro development of Haemoproteus columbae (Haemosporida: Haemoproteidae), with perspectives for genomic studies of avian haemosporidian parasites. Exp Parasitol 2015; 157:163-9. [DOI: 10.1016/j.exppara.2015.08.003] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2014] [Revised: 07/08/2015] [Accepted: 08/16/2015] [Indexed: 10/23/2022]
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20
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González AD, Lotta IA, García LF, Moncada LI, Matta NE. Avian haemosporidians from Neotropical highlands: Evidence from morphological and molecular data. Parasitol Int 2015; 64:48-59. [PMID: 25638289 DOI: 10.1016/j.parint.2015.01.007] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2014] [Revised: 01/07/2015] [Accepted: 01/16/2015] [Indexed: 11/18/2022]
Abstract
Avian haemosporidian parasites have been scarcely studied in the Neotropical highlands despite the high avian diversity reported and the uniqueness of these ecosystems. The aims of this study were to examine Haemoproteus and Plasmodium diversity based on morphological and molecular data, as well as to explore the concordance between these two approaches, when identifying species. We sampled 1487 birds belonging to 166 species, in localities of the Colombian Andean region at elevations ranging from 2100 to 4000 m above sea level. Here, we report twelve morphological parasite species, of which five are undescribed. Thirty parasite cytochrome b lineages are reported, 17 of which for the first time. We provide morphological information and illustrations, as well as, cytochrome b lineages for six morphospecies: Haemoproteus columbae, Haemoproteus witti, Haemoproteus coatneyi, Haemoproteus vireonis, Plasmodium lutzi, and Plasmodium unalis. This is the first report to provide a linkage between morphology and a molecular lineage for H. witti. Cytochrome b gene proved to be useful for species determination as DNA barcoding. Differences in parasite composition between lowlands and highlands in Colombia suggest a replacement of avian Plasmodium fauna. Parasite lineages restricted to either Colombian resident or Nearctic migratory birds were found; but a single lineage common in both has not been recorded in Nearctic non-migratory birds. We generated valuable information by using both morphological and molecular data representing competent host-parasite relationships which are based on observation of gametocytes in circulation; and increased the taxon sampling of avian haemosporidian.
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Affiliation(s)
- Angie D González
- Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá Carrera 30 No 45-03, Bogotá, Colombia.
| | - Ingrid A Lotta
- Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá Carrera 30 No 45-03, Bogotá, Colombia.
| | - Luis F García
- Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá Carrera 30 No 45-03, Bogotá, Colombia.
| | - Ligia I Moncada
- Departamento de Salud Pública, Facultad de Medicina, Universidad Nacional de Colombia, Sede Bogotá, Carrera 30 No 45-03, Bogotá, Colombia.
| | - Nubia E Matta
- Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá Carrera 30 No 45-03, Bogotá, Colombia.
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21
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Palinauskas V, Žiegytė R, Ilgūnas M, Iezhova TA, Bernotienė R, Bolshakov C, Valkiūnas G. Description of the first cryptic avian malaria parasite, Plasmodium homocircumflexum n. sp., with experimental data on its virulence and development in avian hosts and mosquitoes. Int J Parasitol 2015; 45:51-62. [DOI: 10.1016/j.ijpara.2014.08.012] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2014] [Revised: 08/20/2014] [Accepted: 08/22/2014] [Indexed: 10/24/2022]
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22
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Leucocytozoon pterotenuis sp. nov. (Haemosporida, Leucocytozoidae): description of the morphologically unique species from the Grallariidae birds, with remarks on the distribution of Leucocytozoon parasites in the Neotropics. Parasitol Res 2014; 114:1031-44. [DOI: 10.1007/s00436-014-4269-y] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2014] [Accepted: 12/15/2014] [Indexed: 11/26/2022]
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23
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González AD, Matta NE, Ellis VA, Miller ET, Ricklefs RE, Gutiérrez HR. Mixed species flock, nest height, and elevation partially explain avian haemoparasite prevalence in Colombia. PLoS One 2014; 9:e100695. [PMID: 24950223 PMCID: PMC4065061 DOI: 10.1371/journal.pone.0100695] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2014] [Accepted: 05/29/2014] [Indexed: 11/19/2022] Open
Abstract
The high avian biodiversity present in the Neotropical region offers a great opportunity to explore the ecology of host-parasite relationships. We present a survey of avian haemoparasites in a megadiverse country and explore how parasite prevalences are related to physical and ecological host characteristics. Using light microscopy, we documented the presence of haemoparasites in over 2000 individuals belonging to 246 species of wild birds, from nine localities and several ecosystems of Colombia. We analysed the prevalence of six avian haemoparasite taxa in relation to elevation and the following host traits: nest height, nest type, foraging strata, primary diet, sociality, migratory behaviour, and participation in mixed species flocks. Our analyses indicate significant associations between both mixed species flocks and nest height and Haemoproteus and Leucocytozoon prevalence. The prevalence of Leucocytozoon increased with elevation, whereas the prevalence of Trypanosoma and microfilariae decreased. Plasmodium and Haemoproteus prevalence did not vary significantly with elevation; in fact, both parasites were found up to 3300m above sea level. The distribution of parasite prevalence across the phylogeny of bird species included in this study showed little host phylogenetic signal indicating that infection rates in this system are evolutionarily labile. Vector distribution as well as the biology of transmission and the maintenance of populations of avian haemoparasites deserve more detailed study in this system.
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Affiliation(s)
- Angie D. González
- Departamento de Biología, Universidad Nacional de Colombia, Bogotá, Colombia
- * E-mail:
| | - Nubia E. Matta
- Departamento de Biología, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Vincenzo A. Ellis
- Department of Biology, University of Missouri-St Louis, St Louis, Missouri, United States of America
| | - Eliot T. Miller
- Department of Biology, University of Missouri-St Louis, St Louis, Missouri, United States of America
| | - Robert E. Ricklefs
- Department of Biology, University of Missouri-St Louis, St Louis, Missouri, United States of America
| | - H. Rafael Gutiérrez
- Departamento de Biología, Universidad Nacional de Colombia, Bogotá, Colombia
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24
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Valkiūnas G, Palinauskas V, Ilgūnas M, Bukauskaitė D, Dimitrov D, Bernotienė R, Zehtindjiev P, Ilieva M, Iezhova TA. Molecular characterization of five widespread avian haemosporidian parasites (Haemosporida), with perspectives on the PCR-based detection of haemosporidians in wildlife. Parasitol Res 2014; 113:2251-63. [PMID: 24728557 DOI: 10.1007/s00436-014-3880-2] [Citation(s) in RCA: 74] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2014] [Accepted: 03/24/2014] [Indexed: 10/25/2022]
Abstract
Haemosporidians (Haemosporida) are cosmopolitan in birds. Over 250 species of these blood parasites have been described and named; however, molecular markers remain unidentified for the great majority of them. This is unfortunate because linkage between DNA sequences and identifications based on morphological species can provide important information about patterns of transmission, virulence, and evolutionary biology of these organisms. There is an urgent need to remedy this because few experts possess the knowledge to identify haemosporidian species and few laboratories are involved in training these taxonomic skills. Here, we describe new mitochondrial cytochrome b markers for the polymerase chain reaction (PCR)-based detection of four widespread species of avian Haemoproteus (Haemoproteus hirundinis, Haemoproteus parabelopolskyi, Haemoproteus pastoris, Haemoproteus syrnii) and 1 species of Plasmodium (Plasmodium circumflexum). Illustrations of blood stages of the reported species are given, and morphological and phylogenetic analyses identify the DNA lineages that are associated with these parasites. This study indicates that morphological characters, which have been traditionally used in taxonomy of avian haemosporidian parasites, have a phylogenetic value. Perspectives on haemosporidian diagnostics using microscopic and PCR-based methods are discussed, particularly the difficulties in detection of light parasitemia, coinfections, and abortive parasite development. We emphasize that sensitive PCR amplifies more infections than can be transmitted; it should be used carefully in epidemiology studies, particularly in wildlife parasitology research. Because molecular studies are describing remarkably more parasite diversity than previously expected, the need for traditional taxonomy and traditional biological knowledge is becoming all the more crucial. The linkage of molecular and morphological approaches is worth more of the attention of researchers because this approach provides new knowledge for better understanding insufficiently investigated lethal diseases caused by haemosporidian infections, particularly on the exoerythrocytic (tissue) and vector stages. That requires close collaboration between researchers from different fields with a common interest.
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