Which temporal resolution to consider when investigating the impact of climatic data on population dynamics? The case of the lesser horseshoe bat (Rhinolophus hipposideros)

Fine scale genetics reveals the subtle negative effects of roads on an endangered bat

The effective management of species with small and fragmented populations requires an in-depth understanding of how the effects of human-induced habitat disturbance shape the structure and gene flow at fine spatial scales. Identification of putative environmental barriers that affect individual exchange among subpopulations is imperative to prevent extinction risks. Here, we investigated how landscape affects the gene flow and relatedness structure of a population of the endangered lesser horseshoe bat (Rhinolophus hipposideros). We also assessed the effects of sexbiased dispersal on genetic relatedness. We genotyped 287 bat samples collected across southern Portugal and developed resistance surfaces for landscape variables hypothesized to affect gene flow. Then, we used spatially explicit models to fit relatedness distance through the resistance surfaces. We found genetic evidence of sex-biased dispersal and identified a significant fine scale structuring in the relatedness regarding females, the philopatric sex. Males displayed uniform levels of relatedness throughout the landscape. The results indicated less relatedness between the female´ from roosts located on proximity of roads than in roosts away from roads. Also, when analysing the sexes together the relatedness on roosts separated by highway were subtly less related in comparison to those occurring on the same side. Roads seem to be major shapers of the contemporary population structure of females, regardless of being relatively recent structures in the landscape. Furthermore, the relatedness patterns detected suggested that high tree density among roosts and continuity of forest patches in broader surrounding areas, promotes the relatedness among individuals. Landscape heterogeneity among roosts slightly decreases genetic relatedness. Nevertheless, those relationships are still weak, suggesting that population structuring driven by those factors is slowly ongoing. Thus, effective management measures should focus on issues for promoting safe road passages and suitable habitat corridors, allowing for the exchange of individuals and gene flow among lesser horseshoe bat roosts.

Precipitation during two weeks in spring influences reproductive success of first-year females in the long-lived Natterer's bat

Bats are characterized by low reproductive rates in contrast with most of other small mammals. This makes their populations vulnerable when inclement environmental conditions such as cold and rainy weather impair the reproductive success of females. The fine-scale effect of weather on bats, however, remains largely unknown. Using a sliding window analysis approach on an 18-year individualized dataset on six Natterer's bat (Myotis nattereri) colonies, we investigated the effect of fine-scale weather conditions on age-specific reproductive success. We found that increased precipitation during a short time window in spring strongly reduced the probability of successful reproduction of first-year (FY) females. Our data suggest that this time window is concomitant with implantation or early pregnancy, before substantial investment into embryo development. In addition, larger FY had higher reproductive success, suggesting that reproduction may be condition dependent in young females. Reproductive success of older females was not affected by either weather or individual parameters. Our results show that changes in precipitation pattern may compromise the reproductive success of FY females. Further studies are needed to better understand the impact of weather conditions on reproductive success in long-lived bats under climate change scenarios.

Range expansion is associated with increased survival and fecundity in a long-lived bat species

The speed and dynamics of range expansions shape species distributions and community composition. Despite the critical impact of population growth rates for range expansion, they are neglected in existing empirical studies, which focus on the investigation of selected life-history traits. Here, we present an approach based on non-invasive genetic capture-mark-recapture data for the estimation of adult survival, fecundity and juvenile survival, which determine population growth. We demonstrate the reliability of our method with simulated data, and use it to investigate life-history changes associated with range expansion in 35 colonies of the bat species Rhinolophus hipposideros. Comparing the demographic parameters inferred for 19 of those colonies which belong to an expanding population with those inferred for the remaining 16 colonies from a non-expanding population reveals that range expansion is associated with higher net reproduction. Juvenile survival was the main driver of the observed reproduction increase in this long-lived bat species with low per capita annual reproductive output. The higher average growth rate in the expanding population was not associated with a trade-off between increased reproduction and survival, suggesting that the observed increase in reproduction stems from a higher resource acquisition in the expanding population. Environmental conditions in the novel habitat hence seem to have an important influence on range expansion dynamics, and warrant further investigation for the management of range expansion in both native and invasive species.

Spring weather conditions influence breeding phenology and reproductive success in sympatric bat populations

Climate is known to influence breeding phenology and reproductive success in temperate-zone bats, but long-term population level studies and interspecific comparisons are rare. Investigating the extent to which intrinsic (i.e. age), and extrinsic (i.e. spring weather conditions), factors influence such key demographic parameters as the proportion of females becoming pregnant, or completing lactation, each breeding season, is vital to understanding of bat population ecology and life-history traits. Using data from 12 breeding seasons (2006-2017), encompassing the reproductive histories of 623 Myotis daubentonii and 436 Myotis nattereri adult females, we compare rates of recruitment to the breeding population and show that these species differ in their relative sensitivity to environmental conditions and climatic variation, affecting annual reproductive success at the population level. We demonstrate that (1) spring weather conditions influence breeding phenology, with warm, dry and calm conditions leading to earlier parturition dates and advanced juvenile development, whilst cold, wet and windy weather delays birth timing and juvenile growth; (2) reproductive rates in first-year females are influenced by spring weather conditions in that breeding season and in the preceding breeding season when each cohort was born. Pregnancy and lactation rates were both higher when favourable spring foraging conditions were more prevalent; (3) reproductive success increases with age in both species, but at different rates; (4) reproductive rates were consistently higher, and showed less interannual variation, in second-year and older M. daubentonii (mean 91.55% ± 0.05 SD) than M. nattereri (mean 72.74% ± 0.15 SD); (5) estimates of reproductive success at the population level were highly correlated with the size of the juvenile cohort recorded each breeding season. Improving understanding of the influence of environmental conditions, especially extreme climatic fluctuations, and the identification of critical periods (i.e. spring for reproductive female bats in temperate zones), which have disproportionate and lasting impacts on breeding phenology and reproductive success at a population level, is critical for improving predictions of the likely impact of climate change on bat populations.

The importance of local settings: within-year variability in seawater temperature at South Bay, Western Antarctic Peninsula

The Western Antarctic Peninsula (WAP) has undergone significant changes in air and seawater temperatures during the last 50 years. Although highly stenotherm Antarctic organisms are expected to be severely affected by the increase of seawater temperature, high-resolution datasets of seawater temperature within coastal areas of the WAP (where diverse marine communities have been reported) are not commonly available. Here we report on within-year (2016–2017) variation in seawater temperature at three sites on Doumer Island, Palmer Archipelago, WAP. Within a year, Antarctic organisms in South Bay were exposed to water temperatures in excess of 2 °C for more than 25 days and 2.5 °C for more than 10 days. We recorded a temperature range between −1.7° to 3.0 °C. Warming of seawater temperature was 3.75 times faster after October 2016 than it was before October. Results from this study indicate that organisms at South Bay are already exposed to temperatures that are being used in experimental studies to evaluate physiological responses to thermal stress in WAP organisms. Continuous measurements of short to long-term variability in seawater temperature provides important information for parametrizing meaningful experimental treatments that aim to assess the local effects of environmental variation on Antarctic organisms under future climate scenarios.

Combining noninvasive genetics and a new mammalian sex-linked marker provides new tools to investigate population size, structure and individual behaviour: An application to bats

Monitoring wild populations is crucial for their effective management. Noninvasive genetic methods provide robust data from individual free-ranging animals, which can be used in capture-mark-recapture (CMR) models to estimate demographic parameters without capturing or disturbing them. However, sex- and status-specific behaviour, which may lead to differences in detection probabilities, is rarely considered in monitoring. Here, we investigated population size, sex ratio, sex- and status-related behaviour in 19 Rhinolophus hipposideros maternity colonies (Northern France) with a noninvasive genetic CMR approach (using faeces) combined with parentage assignments. The use of the DDX3X/Y-Mam sexual marker designed in this study, which shows inter- and intrachromosomal length polymorphism across placental mammals, together with eight polymorphic microsatellite markers, produced high-quality genetic data with limited genotyping errors and allowed us to reliably distinguish different categories of individuals (males, reproductive and nonreproductive females) and to estimate population sizes. We showed that visual counts represent well-adult female numbers and that population composition in maternity colonies changes dynamically during the summer. Before parturition, colonies mainly harbour pregnant and nonpregnant females with a few visiting males, whereas after parturition, colonies are mainly composed of mothers and their offspring with a few visiting nonmothers and males. Our approach gives deeper insight into sex- and status-specific behaviour, a prerequisite for understanding population dynamics and developing effective monitoring and management strategies. Provided sufficient samples can be obtained, this approach can be readily applied to a wide range of species.