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Lamont BB, He T, Cowling RM. Fossil pollen resolves origin of the South African Proteaceae as transcontinental not transoceanic. ANNALS OF BOTANY 2024; 133:649-658. [PMID: 37076271 PMCID: PMC11082520 DOI: 10.1093/aob/mcad055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Accepted: 04/12/2023] [Indexed: 05/03/2023]
Abstract
BACKGROUND AND AIMS The prevailing view from the areocladogenesis of molecular phylogenies is that the iconic South African Cape Proteaceae (subfamily Proteoideae) arrived from Australia across the Indian Ocean during the Late Cretaceous (100-65 million years ago, Ma). Since fossil pollen indicates that the family probably arose in North-West Africa during the Early Cretaceous, an alternative view is that it migrated to the Cape from North-West-Central Africa. The plan therefore was to collate fossil pollen records throughout Africa to determine if they are consistent with an African (para-autochthonous) origin for the Cape Proteaceae, and to seek further support from other palaeo-disciplines. METHODS We used palynology (identity, date and location of records), molecular phylogeny and chronogram preparation, biogeography of plate tectonics, and palaeo-atmospheric and ocean circulation models. KEY RESULTS Our collation of the rich assemblage of Proteaceae palynomorphs stretching back to 107 Ma (Triorites africaensis) in North-West Africa showed its progressive overland migration to the Cape by 75-65 Ma. No key palynomorphs recorded in Australia-Antarctica have morphological affinities with African fossils but specific clade assignment of the pre-Miocene records is not currently possible. The Cape Proteaceae encompass three molecular-based clades (tribes) whose most recent apparent ancestors are sisters to those in Australia. However, our chronogram shows that the major Adenanthos/Leucadendron-related clade, originating 54-34 Ma, would have 'arrived' too late as species with Proteaceae affinities were already present ~20 million years earlier. The Franklandia/Protea-related clade arose 118-81 Ma so its distinctive pollen should have been the foundation for the scores of palynomorphs recorded at 100-80 Ma, but it was not. Also, the prevailing winds and ocean currents trended away from South Africa rather than towards, as the 'out-of-Australia' hypothesis requires. Based on the evidence assembled here, we list three points favouring an Australian origin and nine against; four points favouring an Antarctic origin and seven against; and nine points favouring a North-West-Central African origin and three against. CONCLUSIONS We conclude that a gradual migration of the Proteaceae from North-West-Central Africa southeast→south→southwest to the Cape and its surroundings occurred via adaptation and speciation during the period 95-70 Ma. We caution that incorrect conclusions may be drawn from literal interpretations of molecular phylogenies that neglect the fossil record and do not recognize the possible confounding effects of selection under matched environments leading to parallel evolution and extinction of bona fide sister clades.
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Affiliation(s)
- Byron B Lamont
- Ecology Section, School of Molecular and Life Sciences, Curtin University, Perth, WA 6845, Australia
| | - Tianhua He
- College of Science, Health, Engineering and Education, Murdoch University, Murdoch, WA, Australia
| | - Richard M Cowling
- African Centre for Coastal Palaeoscience, Nelson Mandela University, Eastern Cape, South Africa
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Pausas JG, Lamont BB. Fire-released seed dormancy - a global synthesis. Biol Rev Camb Philos Soc 2022; 97:1612-1639. [PMID: 35384243 PMCID: PMC9540907 DOI: 10.1111/brv.12855] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 03/17/2022] [Accepted: 03/18/2022] [Indexed: 11/29/2022]
Abstract
Seed dormancy varies greatly between species, clades, communities, and regions. We propose that fireprone ecosystems create ideal conditions for the selection of seed dormancy as fire provides a mechanism for dormancy release and postfire conditions are optimal for germination. Thus, fire‐released seed dormancy should vary in type and abundance under different fire regimes. To test these predictions, we compiled data from a wide range of fire‐related germination experiments for species in different ecosystems across the globe. We identified four dormancy syndromes: heat‐released (physical) dormancy, smoke‐released (physiological) dormancy, non‐fire‐released dormancy, and non‐dormancy. In fireprone ecosystems, fire, in the form of heat and/or chemical by‐products (collectively termed ‘smoke’), are the predominant stimuli for dormancy release and subsequent germination, with climate (cold or warm stratification) and light sometimes playing important secondary roles. Fire (heat or smoke)‐released dormancy is best expressed where woody vegetation is dense and fires are intense, i.e. in crown‐fire ecosystems. In such environments, seed dormancy allows shade‐intolerant species to take advantage of vegetation gaps created by fire and synchronize germination with optimal recruitment conditions. In grassy fireprone ecosystems (e.g. savannas), where fires are less intense but more frequent, seed dormancy is less common and dormancy release is often not directly related to fire (non‐fire‐released dormancy). Rates of germination, whether controls or postfire, are twice as fast in savannas than in mediterranean ecosystems. Fire‐released dormancy is rare to absent in arid ecosystems and rainforests. The seeds of many species with fire‐released dormancy also possess elaiosomes that promote ant dispersal. Burial by ants increases insulation of seeds from fires and places them in a suitable location for fire‐released dormancy. The distribution of these dormancy syndromes across seed plants is not random – certain dormancy types are associated with particular lineages (phylogenetic conservatism). Heat‐released dormancy can be traced back to fireprone floras in the ‘fiery’ mid‐Cretaceous, followed by smoke‐released dormancy, with loss of fire‐related dormancy among recent events associated with the advent of open savannas and non‐fireprone habitats. Anthropogenic influences are now modifying dormancy‐release mechanisms, usually decreasing the role of fire as exaptive effects. We conclude that contrasting fire regimes are a key driver of the evolution and maintenance of diverse seed dormancy types in many of the world's natural ecosystems.
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Affiliation(s)
- Juli G Pausas
- CIDE-CSIC, Consejo Superior de Investigaciones Científicas, Montcada, Valencia, 46113, Spain
| | - Byron B Lamont
- Ecology Section, School of Life and Molecular Sciences, Curtin University, Perth, WA, 6845, Australia
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Lamont BB. Seed biologists beware: Estimates of initial viability based on ungerminated seeds at the end of an experiment may be error-prone. PLANT BIOLOGY (STUTTGART, GERMANY) 2022; 24:399-403. [PMID: 35238136 PMCID: PMC9314915 DOI: 10.1111/plb.13407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Accepted: 02/09/2022] [Indexed: 06/14/2023]
Abstract
Seed viability is routinely measured on seeds that fail to germinate at the end of an experiment. Together with the number of germinants, this is used to estimate viability of the seeds at start of the experiment (i.e., initial viability) and provides the comparative basis on which germination success is determined. The literature and recent data on the germination requirements of Leucadendron species were examined to determine if there was any evidence for a treatment effect on viability of ungerminated seeds at the end of the experiment. The survey showed that sometimes (perhaps often, as the problem has yet to be recognized or reported) prolonged duration in the treatment, especially the control where little germination occurs, lead to loss of viability during the experiment. This resulted in underestimation of initial viability if that treatment was used. I caution against the routine use of end-of-trial germination and viability of ungerminated seeds as an estimate of initial viability in determining germination success of various treatments. I explore ways to deal with the problem but the preference is for estimates of initial viability to be undertaken on a separate sample of seeds concurrently with the experiment as this avoids the risk of seed death during the trial.
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Affiliation(s)
- B. B. Lamont
- Department of Molecular and Life Sciences (Ecology Section)Curtin UniversityPerthWAAustralia
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Mackenzie BDE, Auld TD, Keith DA, Ooi MKJ. Fire Seasonality, Seasonal Temperature Cues, Dormancy Cycling, and Moisture Availability Mediate Post-fire Germination of Species With Physiological Dormancy. FRONTIERS IN PLANT SCIENCE 2021; 12:795711. [PMID: 34925432 PMCID: PMC8678276 DOI: 10.3389/fpls.2021.795711] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Accepted: 11/02/2021] [Indexed: 06/14/2023]
Abstract
Fire seasonality (the time of year of fire occurrence) has important implications for a wide range of demographic processes in plants, including seedling recruitment. However, the underlying mechanisms of fire-driven recruitment of species with physiological seed dormancy remain poorly understood, limiting effective fire and conservation management, with insights hampered by common methodological practices and complex dormancy and germination requirements. We sought to identify the mechanisms that regulate germination of physiologically dormant species in nature and assess their sensitivity to changes in fire seasonality. We employed a combination of laboratory-based germination trials and burial-retrieval trials in natural populations of seven species of Boronia (Rutaceae) to characterize seasonal patterns in dormancy and fire-stimulated germination over a 2-year period and synthesized the observed patterns into a conceptual model of fire seasonality effects on germination. The timing and magnitude of seedling emergence was mediated by seasonal dormancy cycling and seasonal temperature cues, and their interactions with fire seasonality, the degree of soil heating expected during a fire, and the duration of imbibition. Primary dormancy was overcome within 4-10 months' burial and cycled seasonally. Fire-associated heat and smoke stimulated germination once dormancy was alleviated, with both cues required in combination by some species. For some species, germination was restricted to summer temperatures (a strict seasonal requirement), while others germinated over a broader seasonal range of temperatures but exhibited seasonal preferences through greater responses at warmer or cooler temperatures. The impacts of fires in different seasons on germination can vary in strength and direction, even between sympatric congeners, and are strongly influenced by moisture availability (both the timing of post-fire rainfall and the duration soils stay moist enough for germination). Thus, fire seasonality and fire severity (via its effect on soil heating) are expected to significantly influence post-fire emergence patterns in these species and others with physiological dormancy, often leading to "germination interval squeeze." Integration of these concepts into current fire management frameworks is urgently required to ensure best-practice conservation. This is especially pertinent given major, ongoing shifts in fire seasonality and rainfall patterns across the globe due to climate change and increasing anthropogenic ignitions.
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Affiliation(s)
- Berin D. E. Mackenzie
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Kensington, NSW, Australia
- Science, Economics and Insights Division, NSW Department of Planning, Industry and Environment, Parramatta, NSW, Australia
| | - Tony D. Auld
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Kensington, NSW, Australia
- Science, Economics and Insights Division, NSW Department of Planning, Industry and Environment, Parramatta, NSW, Australia
- School of Earth, Atmospheric and Life Sciences, University of Wollongong, Wollongong, NSW, Australia
| | - David A. Keith
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Kensington, NSW, Australia
- Science, Economics and Insights Division, NSW Department of Planning, Industry and Environment, Parramatta, NSW, Australia
- NSW Bushfire Risk Management Research Hub, Wollongong, NSW, Australia
| | - Mark K. J. Ooi
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Kensington, NSW, Australia
- NSW Bushfire Risk Management Research Hub, Wollongong, NSW, Australia
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Williams MR, Lamont BB, He T. Dealing with ‘the spectre of "spurious" correlations': hazards in comparing ratios and other derived variables with a randomization test to determine if a biological interpretation is justified. OIKOS 2021. [DOI: 10.1111/oik.08575] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Matthew R. Williams
- Biodiversity Conservation Science, Dept of Biodiversity Conservation and Attractions Kensington WA Australia
| | - Byron B. Lamont
- Ecology Section, School of Molecular and Life Sciences, Curtin Univ. Perth WA Australia
| | - Tianhua He
- Ecology Section, School of Molecular and Life Sciences, Curtin Univ. Perth WA Australia
- College of Science, Health, Engineering and Education, Murdoch Univ. Murdoch WA Australia
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