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Emmerich M, Costamoling F, Wille R. Modular and extendable 1D-simulation for microfluidic devices. Sci Rep 2024; 14:26311. [PMID: 39487231 PMCID: PMC11530630 DOI: 10.1038/s41598-024-77741-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2024] [Accepted: 10/24/2024] [Indexed: 11/04/2024] Open
Abstract
Microfluidic devices have been the subject of considerable attention in recent years. The development of novel microfluidic devices, their evaluation, and their validation requires simulations. While common methods based on Computational Fluid Dynamics (CFD) can be time-consuming, 1D simulation provides an appealing alternative that leads to efficient results with reasonable quality. Current 1D simulation tools cover specific microfluidic applications; however, these tools are still rare and not widely adopted. There is a need for a more versatile and adaptable tool that covers novel applications, like mixing and the addition of membranes, and allows easy extension, resulting in one comprehensive 1D simulation tool for microfluidic devices. In this work, we present an open-source, modular, and extendable 1D simulation approach for microfluidic devices, which is available as an open-source software package at https://github.com/cda-tum/mmft-modular-1D-simulator. To this end, we propose an implementation that consists of a base module (providing the core functionality) that can be extended with dedicated application-specific modules (providing dedicated support for common microfluidic applications such as mixing, droplets, membranes, etc.). Case studies show that this indeed allows to efficiently simulate a broad spectrum of microfluidic applications in a quality that matches previous results or even fabricated devices.
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Affiliation(s)
- Maria Emmerich
- Technical University of Munich (TUM), Arcisstrasse 21, 80333, Munich, Germany.
| | - Florina Costamoling
- Johannes Kepler University Linz (JKU), Altenberger Strasse 69, 4040, Linz, Austria
| | - Robert Wille
- Technical University of Munich (TUM), Arcisstrasse 21, 80333, Munich, Germany.
- Software Competence Center Hagenberg GmbH (SCCH), Softwarepark 32a, 4232, Hagenberg, Austria.
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Valle NME, Nucci MP, Alves AH, Rodrigues LD, Mamani JB, Oliveira FA, Lopes CS, Lopes AT, Carreño MNP, Gamarra LF. Advances in Concentration Gradient Generation Approaches in a Microfluidic Device for Toxicity Analysis. Cells 2022; 11:cells11193101. [PMID: 36231063 PMCID: PMC9563958 DOI: 10.3390/cells11193101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2022] [Revised: 09/22/2022] [Accepted: 09/27/2022] [Indexed: 11/24/2022] Open
Abstract
This systematic review aimed to analyze the development and functionality of microfluidic concentration gradient generators (CGGs) for toxicological evaluation of different biological organisms. We searched articles using the keywords: concentration gradient generator, toxicity, and microfluidic device. Only 33 of the 352 articles found were included and examined regarding the fabrication of the microdevices, the characteristics of the CGG, the biological model, and the desired results. The main fabrication method was soft lithography, using polydimethylsiloxane (PDMS) material (91%) and SU-8 as the mold (58.3%). New technologies were applied to minimize shear and bubble problems, reduce costs, and accelerate prototyping. The Christmas tree CGG design and its variations were the most reported in the studies, as well as the convective method of generation (61%). Biological models included bacteria and nematodes for antibiotic screening, microalgae for pollutant toxicity, tumor and normal cells for, primarily, chemotherapy screening, and Zebrafish embryos for drug and metal developmental toxicity. The toxic effects of each concentration generated were evaluated mostly with imaging and microscopy techniques. This study showed an advantage of CGGs over other techniques and their applicability for several biological models. Even with soft lithography, PDMS, and Christmas tree being more popular in their respective categories, current studies aim to apply new technologies and intricate architectures to improve testing effectiveness and reduce common microfluidics problems, allowing for high applicability of toxicity tests in different medical and environmental models.
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Affiliation(s)
- Nicole M. E. Valle
- Hospital Israelita Albert Einstein, São Paulo 05652-000, Brazil
- Pontifícia Universidade Católica de São Paulo, São Paulo 01303-050, Brazil
| | - Mariana P. Nucci
- Hospital Israelita Albert Einstein, São Paulo 05652-000, Brazil
- LIM44—Hospital das Clínicas da Faculdade Medicina da Universidade de São Paulo, São Paulo 05403-000, Brazil
| | | | | | | | | | - Caique S. Lopes
- Pontifícia Universidade Católica de São Paulo, São Paulo 01303-050, Brazil
| | - Alexandre T. Lopes
- Departamento de Engenharia de Sistema Eletrônicos, Escola Politécnica, Universidade de São Paulo, São Paulo 05508-010, Brazil
| | - Marcelo N. P. Carreño
- Departamento de Engenharia de Sistema Eletrônicos, Escola Politécnica, Universidade de São Paulo, São Paulo 05508-010, Brazil
| | - Lionel F. Gamarra
- Hospital Israelita Albert Einstein, São Paulo 05652-000, Brazil
- Pontifícia Universidade Católica de São Paulo, São Paulo 01303-050, Brazil
- Correspondence: ; Tel.: +55-11-2151-0243
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Xie Z, Pu H, Sun DW. Computer simulation of submicron fluid flows in microfluidic chips and their applications in food analysis. Compr Rev Food Sci Food Saf 2021; 20:3818-3837. [PMID: 34056852 DOI: 10.1111/1541-4337.12766] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 03/24/2021] [Accepted: 04/15/2021] [Indexed: 01/01/2023]
Abstract
In recent years, countries around the world have maintained a zero-tolerance attitude toward safety problems in the food industry. In order to ensure human health, a fast, sensitive, and high-throughput analysis of food contaminants is necessary to ensure safe food products on the market. Microfluidics, as a high-efficiency and sensitive detection technology, has many advantages in the detection of food contaminants, including foodborne pathogens, pesticides, heavy metal ions, toxic substances, and so forth, especially in conjunction with a variety of submicron fluid driving methods, making food detection and analysis more efficient and accurate. This review introduces the principle of submicron fluid driving modes and discusses the driving simulation of submicron fluid in microfluidic chips. In addition, the latest developments in the application of simulation in food analysis from 2006 to 2020 are discussed, and the computer simulation of submicron fluid flow in microfluidic chips and its application and development trend in food analysis are also highlighted. The review indicates that microfluidic technology, using numerical simulation as an auxiliary tool, combined with traditional methods has greatly improved the detection and analysis of food products. In addition, microfluidics combined with a variety of control methods embodies the ability of specific, multifunctional, and sensitive detection and analysis of food products. The development of high-sensitivity, high-throughput, portable, integrated microfluidic chips will enable the technology to be applied in practice.
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Affiliation(s)
- Zhaoda Xie
- School of Mechanical and Electrical Engineering, Zhongkai University of Agriculture and Engineering, Guangzhou, China.,Academy of Contemporary Food Engineering, South China University of Technology, Guangzhou Higher Education Mega Center, Guangzhou, China
| | - Hongbin Pu
- School of Food Science and Engineering, South China University of Technology, Guangzhou, China.,Academy of Contemporary Food Engineering, South China University of Technology, Guangzhou Higher Education Mega Center, Guangzhou, China.,Engineering and Technological Research Centre of Guangdong Province on Intelligent Sensing and Process Control of Cold Chain Foods, & Guangdong Province Engineering Laboratory for Intelligent Cold Chain Logistics Equipment for Agricultural Products, Guangzhou Higher Education Mega Centre, Guangzhou, China
| | - Da-Wen Sun
- School of Food Science and Engineering, South China University of Technology, Guangzhou, China.,Academy of Contemporary Food Engineering, South China University of Technology, Guangzhou Higher Education Mega Center, Guangzhou, China.,Engineering and Technological Research Centre of Guangdong Province on Intelligent Sensing and Process Control of Cold Chain Foods, & Guangdong Province Engineering Laboratory for Intelligent Cold Chain Logistics Equipment for Agricultural Products, Guangzhou Higher Education Mega Centre, Guangzhou, China.,Food Refrigeration and Computerized Food Technology, School of Agriculture and Food Science Centre, University College Dublin, National University of Ireland, Dublin, Ireland
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Xia HM, Wu JW, Zheng JJ, Zhang J, Wang ZP. Nonlinear microfluidics: device physics, functions, and applications. LAB ON A CHIP 2021; 21:1241-1268. [PMID: 33877234 DOI: 10.1039/d0lc01120g] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The microfluidic flow is typically laminar due to the dominant viscous effects. At Reynolds numbers far below 1 (Re ≪ 1), the fluid inertia can be neglected. For the steady flow of incompressible Newtonian fluids, it approaches linear Stokes flow. At intermediate Re, there exists a weak-inertia flow regime where secondary flows such as Dean vortices are accessible for microfluidic manipulations. Apart from the fluid inertia, other nonlinear factors such as the non-Newtonian fluid properties, concurrent flow of dissimilar fluids, compliant fluidic structures and stimuli-responsive materials can also cause intriguing flow behaviours. Through proper designs, they can be applied for a variety of microfluidic components including mixers, valves, oscillators, stabilizers and auto-regulators etc., greatly enriching the microfluidic flow control and manipulation strategies. Due to its unique working characteristics and advantages, nonlinear microfluidics has increasingly attracted extensive attention. This review presents a systematic survey on this subject. The designs of typical nonlinear microfluidic devices, their working mechanisms, key applications, and the perspective of their future developments will be discussed. The nonlinear microfluidic techniques are believed to play an essential role in the next generation of highly-integrated, automated, and intelligent microfluidics.
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Affiliation(s)
- H M Xia
- School of Mechanical Engineering, Nanjing University of Science and Technology, Nanjing 210094, P. R. China.
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Ubando AT, Africa ADM, Maniquiz-Redillas MC, Culaba AB, Chen WH, Chang JS. Microalgal biosorption of heavy metals: A comprehensive bibliometric review. JOURNAL OF HAZARDOUS MATERIALS 2021; 402:123431. [PMID: 32745872 DOI: 10.1016/j.jhazmat.2020.123431] [Citation(s) in RCA: 83] [Impact Index Per Article: 27.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Revised: 06/24/2020] [Accepted: 07/06/2020] [Indexed: 05/12/2023]
Abstract
Heavy metals in the effluents released from industrial establishments pose risks to the environment and society. Prevalent organisms such as microalgae in industrial wastes can thrive in this harmful environment. The connection of the metal-binding proteins of the microalgal cell wall to the metal ions of the heavy metals enables microalgae as an ideal medium for biosorption. The current literature lacks the review of various microalgae used as biosorption of heavy metals from industrial effluents. This work aims to comprehensively review the literature on the use of microalgae as a biosorption for heavy metals. The study summarizes the application of different microalgae for heavy metals removal by identifying the various factors affecting the biosorption performance. Approaches to quantifying the heavy metals concentration are outlined. The methods of microalgae to generate biocompounds to enable biosorption of heavy metals are itemized. The study also aims to identify the materials produced by microalgae to facilitate biosorption. The industrial sectors with the potential benefit from the adoption of microalgal biosorption of heavy metals are recognized. Moreover, the current challenges and future perspectives of microalgal biosorption are discussed.
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Affiliation(s)
- Aristotle T Ubando
- Mechanical Engineering Department, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines; Center for Engineering and Sustainable Development Research, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines
| | - Aaron Don M Africa
- Center for Engineering and Sustainable Development Research, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines; Electronics and Communication Engineering Department, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines
| | - Marla C Maniquiz-Redillas
- Center for Engineering and Sustainable Development Research, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines; Civil Engineering Department, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines
| | - Alvin B Culaba
- Mechanical Engineering Department, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines; Center for Engineering and Sustainable Development Research, De La Salle University, 2401 Taft Avenue, 0922, Manila, Philippines
| | - Wei-Hsin Chen
- Department of Aeronautics and Astronautics, National Cheng Kung University, Tainan 701, Taiwan; Department of Chemical and Materials Engineering, College of Engineering, Tunghai University, Taichung 407, Taiwan; Department of Mechanical Engineering, National Chin-Yi University of Technology, Taichung 411, Taiwan.
| | - Jo-Shu Chang
- Department of Chemical and Materials Engineering, College of Engineering, Tunghai University, Taichung 407, Taiwan; Department of Chemical Engineering, National Cheng Kung University, Tainan 701, Taiwan
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