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Zhang C, Gao J, Liu L, Wu S. Simulating the effects of optimizing sowing date and variety shift on maize production at finer scale in northeast China under future climate. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2024; 104:3637-3647. [PMID: 38151478 DOI: 10.1002/jsfa.13247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 12/08/2023] [Accepted: 12/28/2023] [Indexed: 12/29/2023]
Abstract
BACKGROUND Global warming and the rising occurrences of climate extremes have become formidable challenges for maize production in northeast China. The optimization of sowing date and variety choice stand out as two economic approaches for maize to enhance its resilience to climate change. Nevertheless, assessment of the potential of optimizing sowing date and variety shift on maize yield at finer scale remains underexamined. This study investigated the implications of optimizing sowing date and implementing variety shift on maize yield from a regional perspective. RESULTS Compared to the reference period (1986-2005), climate change would decrease by 11.5-34.6% (the range describes the differences among climate scenarios and agro-ecological regions) maize yield in the 2050s (2040-2059) if no adaption measure were to be implemented. The combined adaption (optimizing sowing date and variety shift) can improve maize yield by 38.8 ± 11.3%, 42.7 ± 9.7% and 33.9 ± 7.6% under the SSP1-2.6, SSP2-4.5 and SSP5-8.5 scenarios, respectively. The current sowing window typically falls within the projected optimal sowing window, defined as the period capable of achieving 90% of the maximum yield within the potential sowing window under future climate conditions. Consequently, the potential of the effect of optimizing sowing window on maize yield is limited. In contrast, variety shift results in higher yield improvement, as temperature rise creates favorable conditions for transplanting varieties with an extended growth period, particularly in high latitudes and mountainous regions. Under future climate, cumulative precipitation and compound drought and hot days during maize growing seasons are two key factors influencing maize production. CONCLUSIONS The optimization of sowing date and variety choice can improve maize yield in northeast China. In addition, maize production should consider varieties with longer growth period and drought and heat tolerance to adapt to climate change. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Chuanwei Zhang
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences of Resources and Environment, Beijing, China
| | - Jiangbo Gao
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences of Resources and Environment, Beijing, China
| | - Lulu Liu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Shaohong Wu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences of Resources and Environment, Beijing, China
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Kothiyal S, Prabhjyot-Kaur, Sandhu SS, Kaur J. Modelling the climate change impact of mitigation (RCP 2.6) and high emission (RCP 8.5) scenarios on maize yield and possible adaptation measures in different agroclimatic zones of Punjab, India. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023; 103:6984-6994. [PMID: 37322817 DOI: 10.1002/jsfa.12779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 05/19/2023] [Accepted: 06/15/2023] [Indexed: 06/17/2023]
Abstract
BACKGROUND A simulation study was performed for assessing climate change impact on maize under Representative Concentration Pathways (RCPs 2.6 and 8.5) for Punjab, India. The study area comprised five agroclimatic zones (AZs) including seven locations. The bias corrected temperature and rainfall data from four models (CSIRO-Mk-3-6-0, FIO-ESM, IPSL-CM5A-MR and Ensemble) were used as input in CERES-Maize model which was run with constant management practices for two Punjab maize hybrids (PMH 1 and PMH 2). The maize yield for upcoming 70 years (2025-2095) was simulated and its deviations from the baseline (2010-2021) yield were computed under optimized sowing (early-May to early-July) and current sowing (end-May to end-June) period. RESULTS With current sowing dates, the maize yield declined under both RCP 2.6 and RCP 8.5 scenarios, respectively in all the AZs, that is, by 4-23% and 60-80% in AZ II, by 5-60% and 60-90% in AZ III, by 9-30% and 50-90% in AZ IV and by 13-40% and 30-90% in AZ V. Though yield decline was lesser under RCP 2.6 as compared to RCP 8.5, but still it indicates that adaptive strategy such as shifting of sowing dates may be helpful in stabilizing the maize yield. CONCLUSION The results for iterative combinations of sowing period revealed that early June sowing in AZ II for both the hybrids, mid- to end-June (Ludhiana and Amritsar) and end-May to mid-June (Patiala) sowings for PMH 1 were able to nullify the negative impact of climate change. Maize cultivation in AZ IV and AZ V would not be a suitable venture for farmers of the region. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Shivani Kothiyal
- Department of Climate Change and Agricultural Meteorology, Punjab Agricultural University, Ludhiana, India
| | - Prabhjyot-Kaur
- Department of Climate Change and Agricultural Meteorology, Punjab Agricultural University, Ludhiana, India
| | - Sandeep Singh Sandhu
- Department of Climate Change and Agricultural Meteorology, Punjab Agricultural University, Ludhiana, India
| | - Jatinder Kaur
- Department of Climate Change and Agricultural Meteorology, Punjab Agricultural University, Ludhiana, India
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Chaganti C, Phule AS, Chandran LP, Sonth B, Kavuru VPB, Govindannagari R, Sundaram RM. Silicate solubilizing and plant growth promoting bacteria interact with biogenic silica to impart heat stress tolerance in rice by modulating physiology and gene expression. Front Microbiol 2023; 14:1168415. [PMID: 37520375 PMCID: PMC10374332 DOI: 10.3389/fmicb.2023.1168415] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 05/22/2023] [Indexed: 08/01/2023] Open
Abstract
Heat stress caused due to increasing warming climate has become a severe threat to global food production including rice. Silicon plays a major role in improving growth and productivity of rice by aiding in alleviating heat stress in rice. Soil silicon is only sparingly available to the crops can be made available by silicate solubilizing and plant-growth-promoting bacteria that possess the capacity to solubilize insoluble silicates can increase the availability of soluble silicates in the soil. In addition, plant growth promoting bacteria are known to enhance the tolerance to abiotic stresses of plants, by affecting the biochemical and physiological characteristics of plants. The present study is intended to understand the role of beneficial bacteria viz. Rhizobium sp. IIRR N1 a silicate solublizer and Gluconacetobacter diazotrophicus, a plant growth promoting bacteria and their interaction with insoluble silicate sources on morpho-physiological and molecular attributes of rice (Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system. Joint inoculation of silicates and both the bacteria increased silicon content in rice tissue, root and shoot biomass, significantly increased the antioxidant enzyme activities (viz. superoxidase dismutase, catalase and ascorbate peroxidase) compared to other treatments with sole application of either silicon or bacteria. The physiological traits (viz. chlorophyll content, relative water content) were also found to be significantly enhanced in presence of silicates and both the bacteria after exposure to heat stress conditions. Expression profiling of shoot and root tissues of rice seedlings revealed that seedlings grown in the presence of silicates and both the bacteria exhibited higher expression of heat shock proteins (HSPs viz., OsHsp90, OsHsp100 and 60 kDa chaperonin), hormone-related genes (OsIAA6) and silicon transporters (OsLsi1 and OsLsi2) as compared to seedlings treated with either silicates or with the bacteria alone. The results thus reveal the interactive effect of combined application of silicates along with bacteria Rhizobium sp. IIRR N1, G. diazotrophicus inoculation not only led to augmented silicon uptake by rice seedlings but also influenced the plant biomass and elicited higher expression of HSPs, hormone-related and silicon transporter genes leading to improved tolerance of seedling to heat stress.
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Yadav RK, Tripathi MK, Tiwari S, Tripathi N, Asati R, Chauhan S, Tiwari PN, Payasi DK. Genome Editing and Improvement of Abiotic Stress Tolerance in Crop Plants. Life (Basel) 2023; 13:1456. [PMID: 37511831 PMCID: PMC10381907 DOI: 10.3390/life13071456] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Revised: 06/25/2023] [Accepted: 06/26/2023] [Indexed: 07/30/2023] Open
Abstract
Genome editing aims to revolutionise plant breeding and could assist in safeguarding the global food supply. The inclusion of a 12-40 bp recognition site makes mega nucleases the first tools utilized for genome editing and first generation gene-editing tools. Zinc finger nucleases (ZFNs) are the second gene-editing technique, and because they create double-stranded breaks, they are more dependable and effective. ZFNs were the original designed nuclease-based approach of genome editing. The Cys2-His2 zinc finger domain's discovery made this technique possible. Clustered regularly interspaced short palindromic repeats (CRISPR) are utilized to improve genetics, boost biomass production, increase nutrient usage efficiency, and develop disease resistance. Plant genomes can be effectively modified using genome-editing technologies to enhance characteristics without introducing foreign DNA into the genome. Next-generation plant breeding will soon be defined by these exact breeding methods. There is abroad promise that genome-edited crops will be essential in the years to come for improving the sustainability and climate-change resilience of food systems. This method also has great potential for enhancing crops' resistance to various abiotic stressors. In this review paper, we summarize the most recent findings about the mechanism of abiotic stress response in crop plants and the use of the CRISPR/Cas mediated gene-editing systems to improve tolerance to stresses including drought, salinity, cold, heat, and heavy metals.
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Affiliation(s)
- Rakesh Kumar Yadav
- Department of Genetics & Plant Breeding, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
| | - Manoj Kumar Tripathi
- Department of Genetics & Plant Breeding, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
- Department of Plant Molecular Biology & Biotechnology, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
| | - Sushma Tiwari
- Department of Genetics & Plant Breeding, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
- Department of Plant Molecular Biology & Biotechnology, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
| | - Niraj Tripathi
- Directorate of Research Services, Jawaharlal Nehru Krishi Vishwa Vidyalaya, Jabalpur 482004, India
| | - Ruchi Asati
- Department of Genetics & Plant Breeding, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
| | - Shailja Chauhan
- Department of Genetics & Plant Breeding, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
| | - Prakash Narayan Tiwari
- Department of Plant Molecular Biology & Biotechnology, College of Agriculture, Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya, Gwalior 474002, India
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Rahman MU, Zulfiqar S, Raza MA, Ahmad N, Zhang B. Engineering Abiotic Stress Tolerance in Crop Plants through CRISPR Genome Editing. Cells 2022; 11:cells11223590. [PMID: 36429019 PMCID: PMC9688763 DOI: 10.3390/cells11223590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 11/09/2022] [Accepted: 11/11/2022] [Indexed: 11/16/2022] Open
Abstract
Environmental abiotic stresses challenge food security by depressing crop yields often exceeding 50% of their annual production. Different methods, including conventional as well as genomic-assisted breeding, mutagenesis, and genetic engineering have been utilized to enhance stress resilience in several crop species. Plant breeding has been partly successful in developing crop varieties against abiotic stresses owning to the complex genetics of the traits as well as the narrow genetic base in the germplasm. Irrespective of the fact that genetic engineering can transfer gene(s) from any organism(s), transgenic crops have become controversial mainly due to the potential risk of transgene-outcrossing. Consequently, the cultivation of transgenic crops is banned in certain countries, particularly in European countries. In this scenario, the discovery of the CRISPR tool provides a platform for producing transgene-free genetically edited plants-similar to the mutagenized crops that are not extensively regulated such as genetically modified organisms (GMOs). Thus, the genome-edited plants without a transgene would likely go into the field without any restriction. Here, we focused on the deployment of CRISPR for the successful development of abiotic stress-tolerant crop plants for sustaining crop productivity under changing environments.
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Affiliation(s)
- Mehboob-ur Rahman
- Plant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
- Correspondence: (M.-u.R.); (B.Z.)
| | - Sana Zulfiqar
- Plant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Muhammad Ahmad Raza
- Plant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Niaz Ahmad
- Plant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE-C, PIEAS), Faisalabad 38000, Pakistan
| | - Baohong Zhang
- Department of Biology, East Carolina University, Greenville, NC 27858, USA
- Correspondence: (M.-u.R.); (B.Z.)
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Assessment of land suitability using a soil-indicator-based approach in a geomatics environment. Sci Rep 2022; 12:18113. [PMID: 36302834 PMCID: PMC9613761 DOI: 10.1038/s41598-022-22727-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 10/18/2022] [Indexed: 12/30/2022] Open
Abstract
The study aims to develop new approach for soil suitability evaluation, Based on the fact that choosing the proper agricultural sites is a requirement for good ergonomic and financial feasibility. The AHP included a selection of different criteria used for analysis and categorized according to their usefulness in relation to the growth conditions/requirements of the selected crops. Lithology, soil physicochemical, topography (slope and elevation), climate (temperature and rainfall), and irrigation water were the main criteria selected for the study. The study indicated that the area is suitable for agricultural use, taking into account the quality of the water used to maintain the quality of the soil. According to the FAO the suitability result was for S1 (0.71%), S2 (19.81%), S3 (41.46%), N1 (18.33%) and N2 (19.68%) of the total area. While the results obtained from the new approach for the study 9.51%, 30.82%, 40.12% and 19.54 for very high, high, moderate, low and very low suitability respectively, Taking into account that the constraints units of FAO is located in very low suitability class with 0.69% of the total area which Not valid for crop production due to some restrictions. The findings of the study will help narrow the area to the suitable sites that may further be sustainably used for annual and/or perennial crops. The proposed approach has high potential in applications for assessing land conditions and can facilitate optimal planning for agricultural use.
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Ammar KA, Kheir AM, Manikas I. Agricultural big data and methods and models for food security analysis-a mini-review. PeerJ 2022; 10:e13674. [PMID: 35789661 PMCID: PMC9250308 DOI: 10.7717/peerj.13674] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Accepted: 06/13/2022] [Indexed: 01/17/2023] Open
Abstract
Background Big data and data analysis methods and models are important tools in food security (FS) studies for gap analysis and preparation of appropriate analytical frameworks. These innovations necessitate the development of novel methods for collecting, storing, processing, and extracting data. Methodology The primary goal of this study was to conduct a critical review of agricultural big data and methods and models used for FS studies published in peer-reviewed journals since 2010. Approximately 130 articles were selected for full content review after the pre-screening process. Results There are different sources of data collection, including but not limited to online databases, the internet, omics, Internet of Things, social media, survey rounds, remote sensing, and the Food and Agriculture Organization Corporate Statistical Database. The collected data require analysis (i.e., mining, neural networks, Bayesian networks, and other ML algorithms) before data visualization using Python, R, Circos, Gephi, Tableau, or Cytoscape. Approximately 122 models, all of which were used in FS studies worldwide, were selected from 130 articles. However, most of these models addressed only one or two dimensions of FS (i.e., availability and access) and ignored the other dimensions (i.e., stability and utilization), creating a gap in the global context. Conclusions There are certain FS gaps both worldwide and in the United Arab Emirates that need to be addressed by scientists and policymakers. Following the identification of the drivers, policies, and indicators, the findings of this review could be used to develop an appropriate analytical framework for FS and nutrition.
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Affiliation(s)
- Khalil A. Ammar
- International Center for Biosaline Agriculture, ICBA, Dubai, United Arab Emirates
| | - Ahmed M.S. Kheir
- International Center for Biosaline Agriculture, ICBA, Dubai, United Arab Emirates,Soils, Water and Environment Research Institute, Agricultural Research Center, Giza, Egypt
| | - Ioannis Manikas
- Faculty of Business, University of Wollongong in Dubai, Dubai, UAE, United Arab Emirates
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Shaffique S, Khan MA, Wani SH, Pande A, Imran M, Kang SM, Rahim W, Khan SA, Bhatta D, Kwon EH, Lee IJ. A Review on the Role of Endophytes and Plant Growth Promoting Rhizobacteria in Mitigating Heat Stress in Plants. Microorganisms 2022; 10:microorganisms10071286. [PMID: 35889005 PMCID: PMC9319882 DOI: 10.3390/microorganisms10071286] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Revised: 06/17/2022] [Accepted: 06/20/2022] [Indexed: 02/04/2023] Open
Abstract
Among abiotic stresses, heat stress is described as one of the major limiting factors of crop growth worldwide, as high temperatures elicit a series of physiological, molecular, and biochemical cascade events that ultimately result in reduced crop yield. There is growing interest among researchers in the use of beneficial microorganisms. Intricate and highly complex interactions between plants and microbes result in the alleviation of heat stress. Plant–microbe interactions are mediated by the production of phytohormones, siderophores, gene expression, osmolytes, and volatile compounds in plants. Their interaction improves antioxidant activity and accumulation of compatible osmolytes such as proline, glycine betaine, soluble sugar, and trehalose, and enriches the nutrient status of stressed plants. Therefore, this review aims to discuss the heat response of plants and to understand the mechanisms of microbe-mediated stress alleviation on a physio-molecular basis. This review indicates that microbes have a great potential to enhance the protection of plants from heat stress and enhance plant growth and yield. Owing to the metabolic diversity of microorganisms, they can be useful in mitigating heat stress in crop plants. In this regard, microorganisms do not present new threats to ecological systems. Overall, it is expected that continued research on microbe-mediated heat stress tolerance in plants will enable this technology to be used as an ecofriendly tool for sustainable agronomy.
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Affiliation(s)
- Shifa Shaffique
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.S.); (M.A.K.); (M.I.); (S.-M.K.); (D.B.); (E.-H.K.)
| | - Muhammad Aaqil Khan
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.S.); (M.A.K.); (M.I.); (S.-M.K.); (D.B.); (E.-H.K.)
| | - Shabir Hussain Wani
- Mountain Research Center for Field Crops Khudwani, Shere-e-Kashmir University of Agriculture Sciences and Technology Srinagar, Anantnag 190025, Jammu and Kashmir, India;
| | - Anjali Pande
- Laboratory of Plant Molecular Pathology and Functional Genomics, Department of Plant Biosciences, School of Applied Biosciences, College of Agriculture and Life Science, Kyungpook National University, Daegu 41944, Korea; (A.P.); (W.R.)
| | - Muhammad Imran
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.S.); (M.A.K.); (M.I.); (S.-M.K.); (D.B.); (E.-H.K.)
| | - Sang-Mo Kang
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.S.); (M.A.K.); (M.I.); (S.-M.K.); (D.B.); (E.-H.K.)
| | - Waqas Rahim
- Laboratory of Plant Molecular Pathology and Functional Genomics, Department of Plant Biosciences, School of Applied Biosciences, College of Agriculture and Life Science, Kyungpook National University, Daegu 41944, Korea; (A.P.); (W.R.)
| | - Sumera Afzal Khan
- Centre of Biotechnology and Microbiology, University of Peshawar, Peshawar 45000, Pakistan;
| | - Dibya Bhatta
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.S.); (M.A.K.); (M.I.); (S.-M.K.); (D.B.); (E.-H.K.)
| | - Eun-Hae Kwon
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.S.); (M.A.K.); (M.I.); (S.-M.K.); (D.B.); (E.-H.K.)
| | - In-Jung Lee
- Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea; (S.S.); (M.A.K.); (M.I.); (S.-M.K.); (D.B.); (E.-H.K.)
- Correspondence: ; Tel.: +82-53-950-5708
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