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For: Ito T, Suzaki K, Nakano M, Sato A. Characterization of a new apscaviroid from American persimmon. Arch Virol 2013;158:2629-31. [PMID: 23827974 DOI: 10.1007/s00705-013-1772-x] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2013] [Accepted: 05/19/2013] [Indexed: 10/26/2022]
Number Cited by Other Article(s)
1
Li G, Li J, Zhang H, Li J, Jia L, Zhou S, Wang Y, Sun J, Tan M, Shao J. ASSVd infection inhibits the vegetative growth of apple trees by affecting leaf metabolism. FRONTIERS IN PLANT SCIENCE 2023;14:1137630. [PMID: 36909405 PMCID: PMC9998556 DOI: 10.3389/fpls.2023.1137630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Accepted: 02/07/2023] [Indexed: 06/18/2023]
2
Venkataraman S, Badar U, Shoeb E, Hashim G, AbouHaidar M, Hefferon K. An Inside Look into Biological Miniatures: Molecular Mechanisms of Viroids. Int J Mol Sci 2021;22:2795. [PMID: 33801996 PMCID: PMC8001946 DOI: 10.3390/ijms22062795] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2020] [Revised: 03/01/2021] [Accepted: 03/03/2021] [Indexed: 11/17/2022]  Open
3
Chiumenti M, Navarro B, Candresse T, Flores R, Di Serio F. Reassessing species demarcation criteria in viroid taxonomy by pairwise identity matrices. Virus Evol 2021;7:veab001. [PMID: 33623708 PMCID: PMC7887442 DOI: 10.1093/ve/veab001] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
4
SANO T. Progress in 50 years of viroid research-Molecular structure, pathogenicity, and host adaptation. PROCEEDINGS OF THE JAPAN ACADEMY. SERIES B, PHYSICAL AND BIOLOGICAL SCIENCES 2021;97:371-401. [PMID: 34380915 PMCID: PMC8403530 DOI: 10.2183/pjab.97.020] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Accepted: 04/30/2021] [Indexed: 05/27/2023]
5
Vivek AT, Zahra S, Kumar S. From current knowledge to best practice: A primer on viral diagnostics using deep sequencing of virus-derived small interfering RNAs (vsiRNAs) in infected plants. Methods 2019;183:30-37. [PMID: 31669354 DOI: 10.1016/j.ymeth.2019.10.009] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2019] [Revised: 10/21/2019] [Accepted: 10/22/2019] [Indexed: 01/05/2023]  Open
6
Leichtfried T, Dobrovolny S, Reisenzein H, Steinkellner S, Gottsberger RA. Apple chlorotic fruit spot viroid: a putative new pathogenic viroid on apple characterized by next-generation sequencing. Arch Virol 2019;164:3137-3140. [PMID: 31598842 PMCID: PMC6823291 DOI: 10.1007/s00705-019-04420-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2019] [Accepted: 08/29/2019] [Indexed: 02/03/2023]
7
Double-Stranded RNA-Enriched Preparations to Identify Viroids by Next-Generation Sequencing. Methods Mol Biol 2019. [PMID: 29492884 DOI: 10.1007/978-1-4939-7683-6_3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
8
Hadidi A. Next-Generation Sequencing and CRISPR/Cas13 Editing in Viroid Research and Molecular Diagnostics. Viruses 2019;11:E120. [PMID: 30699972 PMCID: PMC6409718 DOI: 10.3390/v11020120] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2019] [Revised: 01/24/2019] [Accepted: 01/25/2019] [Indexed: 12/12/2022]  Open
9
Wang Y, Atta S, Wang X, Yang F, Zhou C, Cao M. Transcriptome sequencing reveals novel Citrus bark cracking viroid (CBCVd) variants from citrus and their molecular characterization. PLoS One 2018;13:e0198022. [PMID: 29889858 PMCID: PMC5995356 DOI: 10.1371/journal.pone.0198022] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2017] [Accepted: 05/11/2018] [Indexed: 11/18/2022]  Open
10
Zhang Z, Cui X, Jiang J, Xiao H, Wang H, Wu Q, Habili N, Li S. Improved detection of grapevine latent viroid by RT-qPCR, its bioassay analysis, and its rare occurrence worldwide. J Virol Methods 2018;254:13-17. [PMID: 29407207 DOI: 10.1016/j.jviromet.2018.01.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2017] [Revised: 01/20/2018] [Accepted: 01/21/2018] [Indexed: 10/18/2022]
11
A novel citrus viroid found in Australia, tentatively named citrus viroid VII. Arch Virol 2017;163:215-218. [PMID: 29027592 DOI: 10.1007/s00705-017-3591-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2016] [Accepted: 09/16/2017] [Indexed: 10/18/2022]
12
Identification of a viroid-like RNA in a lychee Transcriptome Shotgun Assembly. Virus Res 2017;240:1-7. [DOI: 10.1016/j.virusres.2017.07.012] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2017] [Revised: 07/03/2017] [Accepted: 07/03/2017] [Indexed: 11/20/2022]
13
Hadidi A, Flores R, Candresse T, Barba M. Next-Generation Sequencing and Genome Editing in Plant Virology. Front Microbiol 2016;7:1325. [PMID: 27617007 PMCID: PMC4999435 DOI: 10.3389/fmicb.2016.01325] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2016] [Accepted: 08/11/2016] [Indexed: 01/18/2023]  Open
14
Combined DECS Analysis and Next-Generation Sequencing Enable Efficient Detection of Novel Plant RNA Viruses. Viruses 2016;8:70. [PMID: 27072419 PMCID: PMC4810260 DOI: 10.3390/v8030070] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2015] [Revised: 01/26/2016] [Accepted: 02/08/2016] [Indexed: 01/06/2023]  Open
15
Ma Y, Navarro B, Zhang Z, Lu M, Zhou X, Chi S, Di Serio F, Li S. Identification and molecular characterization of a novel monopartite geminivirus associated with mulberry mosaic dwarf disease. J Gen Virol 2015;96:2421-2434. [PMID: 25953916 DOI: 10.1099/vir.0.000175] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]  Open
16
An assemblage of divergent variants of a novel putative closterovirus from American persimmon. Virus Genes 2015;51:105-11. [PMID: 25921465 DOI: 10.1007/s11262-015-1202-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2014] [Accepted: 04/17/2015] [Indexed: 10/23/2022]
17
Viroids, the simplest RNA replicons: How they manipulate their hosts for being propagated and how their hosts react for containing the infection. Virus Res 2015;209:136-45. [PMID: 25738582 DOI: 10.1016/j.virusres.2015.02.027] [Citation(s) in RCA: 66] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2014] [Revised: 02/23/2015] [Accepted: 02/23/2015] [Indexed: 12/31/2022]
18
Wu Q, Ding SW, Zhang Y, Zhu S. Identification of viruses and viroids by next-generation sequencing and homology-dependent and homology-independent algorithms. ANNUAL REVIEW OF PHYTOPATHOLOGY 2015;53:425-44. [PMID: 26047558 DOI: 10.1146/annurev-phyto-080614-120030] [Citation(s) in RCA: 114] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
19
Discovery of replicating circular RNAs by RNA-seq and computational algorithms. PLoS Pathog 2014;10:e1004553. [PMID: 25503469 PMCID: PMC4263765 DOI: 10.1371/journal.ppat.1004553] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2014] [Accepted: 11/04/2014] [Indexed: 11/19/2022]  Open
20
Current status of viroid taxonomy. Arch Virol 2014;159:3467-78. [PMID: 25216773 DOI: 10.1007/s00705-014-2200-6] [Citation(s) in RCA: 90] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2014] [Accepted: 07/30/2014] [Indexed: 12/20/2022]
21
What has been happening with viroids? Virus Genes 2014;49:175-84. [DOI: 10.1007/s11262-014-1110-8] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2014] [Accepted: 08/18/2014] [Indexed: 12/18/2022]
22
Identification and characterization of a viroid resembling apple dimple fruit viroid in fig (Ficus carica L.) by next generation sequencing of small RNAs. Virus Res 2014;188:54-9. [PMID: 24704673 DOI: 10.1016/j.virusres.2014.03.026] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2014] [Revised: 03/20/2014] [Accepted: 03/24/2014] [Indexed: 01/16/2023]
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