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Baluška F, Miller WB, Reber AS. Biomolecular Basis of Cellular Consciousness via Subcellular Nanobrains. Int J Mol Sci 2021; 22:ijms22052545. [PMID: 33802617 PMCID: PMC7961929 DOI: 10.3390/ijms22052545] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 02/24/2021] [Accepted: 02/25/2021] [Indexed: 02/07/2023] Open
Abstract
Cells emerged at the very beginning of life on Earth and, in fact, are coterminous with life. They are enclosed within an excitable plasma membrane, which defines the outside and inside domains via their specific biophysical properties. Unicellular organisms, such as diverse protists and algae, still live a cellular life. However, fungi, plants, and animals evolved a multicellular existence. Recently, we have developed the cellular basis of consciousness (CBC) model, which proposes that all biological awareness, sentience and consciousness are grounded in general cell biology. Here we discuss the biomolecular structures and processes that allow for and maintain this cellular consciousness from an evolutionary perspective.
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Affiliation(s)
- František Baluška
- Institute of Cellular and Molecular Botany, University of Bonn, 53115 Bonn, Germany
- Correspondence:
| | | | - Arthur S. Reber
- Department of Psychology, University of British Columbia, Vancouver, BC V6T 1Z4, Canada;
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Baluška F, Lyons S. Archaeal Origins of Eukaryotic Cell and Nucleus. Biosystems 2021; 203:104375. [PMID: 33549602 DOI: 10.1016/j.biosystems.2021.104375] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Revised: 01/29/2021] [Accepted: 01/29/2021] [Indexed: 01/12/2023]
Abstract
Symbiosis is a major evolutionary force, especially at the cellular level. Here we discuss several older and new discoveries suggesting that besides mitochondria and plastids, eukaryotic nuclei also have symbiotic origins. We propose an archaea-archaea scenario for the evolutionary origin of the eukaryotic cells. We suggest that two ancient archaea-like cells, one based on the actin cytoskeleton and another one based on the tubulin-centrin cytoskeleton, merged together to form the first nucleated eukaryotic cell. This archaeal endosymbiotic origin of eukaryotic cells and their nuclei explains several features of eukaryotic cells which are incompatible with the currently preferred autogenous scenarios of eukaryogenesis.
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Affiliation(s)
| | - Sherrie Lyons
- Union College, 130 N. College, St. - Schenectady, NY, 12305, USA.
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Chaffey N, Volkmann D, Baluška F. The botanical multiverse of Peter Barlow. Commun Integr Biol 2019; 12:14-30. [PMID: 31156759 PMCID: PMC6529214 DOI: 10.1080/19420889.2019.1575788] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Accepted: 01/25/2019] [Indexed: 02/02/2023] Open
Abstract
Dr Peter Barlow, who died in 2017, was one of the most respected botanists and biologists of the latter half of the 20th Century. His interests covered a wide range of plant biological topics, e.g. root growth and development, plant cytoskeleton, effects of gravity, plant intelligence, pattern formation, and evolution of eukaryotic cells. Here we consider Peter's numerous contributions to the: elucidation of plant patterns; understanding of root biology; role of the plant cytoskeleton in growth and development; influence of the Moon on terrestrial vegetation; Cell Body concept; and plant neurobiology. In so doing we attempt not only to provide an overview of Peter's important work in many areas of plant biology, but also to place that work in the context of recent advances in plant and biological sciences.
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Affiliation(s)
- Nigel Chaffey
- College of Liberal Arts, Bath Spa University, Bath, UK
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Baluška F, Lyons S. Energide-cell body as smallest unit of eukaryotic life. ANNALS OF BOTANY 2018; 122:741-745. [PMID: 29474513 PMCID: PMC6215040 DOI: 10.1093/aob/mcy022] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2017] [Accepted: 02/01/2018] [Indexed: 06/08/2023]
Abstract
Background The evolutionary origin of the eukaryotic nucleus is obscure and controversial. Currently preferred are autogenic concepts; ideas of a symbiotic origin are mostly discarded and forgotten. Here we briefly discuss these issues and propose a new version of the symbiotic and archaeal origin of the eukaryotic nucleus. Scope and Conclusions The nucleus of eukaryotic cells forms via its perinuclear microtubules, the primary eukaryotic unit known also as the Energide-cell body. As for all other endosymbiotic organelles, new Energides are generated only from other Energides. While the Energide cannot be generated de novo, it can use its secretory apparatus to generate de novo the cell periphery apparatus. We suggest that Virchow's tenet Omnis cellula e cellula should be updated as Omnis Energide e Energide to reflect the status of the Energide as the primary unit of the eukaryotic cell, and life. In addition, the plasma membrane provides feedback to the Energide and renders it protection via the plasma membrane-derived endosomal network. New discoveries suggest archaeal origins of both the Energide and its host cell.
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Biological evolution as defense of 'self'. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2018; 142:54-74. [PMID: 30336184 DOI: 10.1016/j.pbiomolbio.2018.10.002] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2018] [Revised: 09/27/2018] [Accepted: 10/11/2018] [Indexed: 02/06/2023]
Abstract
Although the origin of self-referential consciousness is unknown, it can be argued that the instantiation of self-reference was the commencement of the living state as phenomenal experientiality. As self-referential cognition is demonstrated by all living organisms, life can be equated with the sustenance of cellular homeostasis in the continuous defense of 'self'. It is proposed that the epicenter of 'self' is perpetually embodied within the basic cellular form in which it was instantiated. Cognition-Based Evolution argues that all of biological and evolutionary development represents the perpetual autopoietic defense of self-referential basal cellular states of homeostatic preference. The means by which these states are attained and maintained is through self-referential measurement of information and its communication. The multicellular forms, either as biofilms or holobionts, represent the cellular attempt to achieve maximum states of informational distinction and energy efficiency through individual and collective means. In this frame, consciousness, self-consciousness and intelligence can be identified as forms of collective cellular phenotype directed towards the defense of fundamental cellular self-reference.
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Baluška F, Mancuso S. Plant Cognition and Behavior: From Environmental Awareness to Synaptic Circuits Navigating Root Apices. MEMORY AND LEARNING IN PLANTS 2018. [DOI: 10.1007/978-3-319-75596-0_4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Chen M, Rajapakse D, Fraczek M, Luo C, Forrester JV, Xu H. Retinal pigment epithelial cell multinucleation in the aging eye - a mechanism to repair damage and maintain homoeostasis. Aging Cell 2016; 15:436-45. [PMID: 26875723 PMCID: PMC4854907 DOI: 10.1111/acel.12447] [Citation(s) in RCA: 101] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/29/2015] [Indexed: 11/29/2022] Open
Abstract
Retinal pigment epithelial (RPE) cells are central to retinal health and homoeostasis. Dysfunction or death of RPE cells underlies many age-related retinal degenerative disorders particularly age-related macular degeneration. During aging RPE cells decline in number, suggesting an age-dependent cell loss. RPE cells are considered to be postmitotic, and how they repair damage during aging remains poorly defined. We show that RPE cells increase in size and become multinucleate during aging in C57BL/6J mice. Multinucleation appeared not to be due to cell fusion, but to incomplete cell division, that is failure of cytokinesis. Interestingly, the phagocytic activity of multinucleate RPE cells was not different from that of mononuclear RPE cells. Furthermore, exposure of RPE cells in vitro to photoreceptor outer segment (POS), particularly oxidized POS, dose-dependently promoted multinucleation and suppressed cell proliferation. Both failure of cytokinesis and suppression of proliferation required contact with POS. Exposure to POS also induced reactive oxygen species and DNA oxidation in RPE cells. We propose that RPE cells have the potential to proliferate in vivo and to repair defects in the monolayer. We further propose that the conventionally accepted 'postmitotic' status of RPE cells is due to a modified form of contact inhibition mediated by POS and that RPE cells are released from this state when contact with POS is lost. This is seen in long-standing rhegmatogenous retinal detachment as overtly proliferating RPE cells (proliferative vitreoretinopathy) and more subtly as multinucleation during normal aging. Age-related oxidative stress may promote failure of cytokinesis and multinucleation in RPE cells.
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Affiliation(s)
- Mei Chen
- Centre for Experimental Medicine; School of Medicine, Dentistry & Biomedical Sciences; Queen's University Belfast; 97 Lisburn Road Belfast BT9 7 BL UK
| | - Dinusha Rajapakse
- Centre for Experimental Medicine; School of Medicine, Dentistry & Biomedical Sciences; Queen's University Belfast; 97 Lisburn Road Belfast BT9 7 BL UK
| | - Monika Fraczek
- Section of Immunology and Infection; Division of Applied Medicine; School of Medicine and Dentistry; Institute of Medical Science; University of Aberdeen; Foresterhill Aberdeen AB25 2ZD UK
| | - Chang Luo
- Centre for Experimental Medicine; School of Medicine, Dentistry & Biomedical Sciences; Queen's University Belfast; 97 Lisburn Road Belfast BT9 7 BL UK
| | - John V. Forrester
- Section of Immunology and Infection; Division of Applied Medicine; School of Medicine and Dentistry; Institute of Medical Science; University of Aberdeen; Foresterhill Aberdeen AB25 2ZD UK
- Ocular Immunology Program; Centre for Ophthalmology and Visual Science; The University of Western Australia; Perth WA 6009 Australia
- Centre for Experimental Immunology; Lions Eye Institute; Nedlands WA 6009 Australia
| | - Heping Xu
- Centre for Experimental Medicine; School of Medicine, Dentistry & Biomedical Sciences; Queen's University Belfast; 97 Lisburn Road Belfast BT9 7 BL UK
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Baum DA, Baum B. An inside-out origin for the eukaryotic cell. BMC Biol 2014; 12:76. [PMID: 25350791 PMCID: PMC4210606 DOI: 10.1186/s12915-014-0076-2] [Citation(s) in RCA: 97] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2014] [Accepted: 09/17/2014] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Although the origin of the eukaryotic cell has long been recognized as the single most profound change in cellular organization during the evolution of life on earth, this transition remains poorly understood. Models have always assumed that the nucleus and endomembrane system evolved within the cytoplasm of a prokaryotic cell. RESULTS Drawing on diverse aspects of cell biology and phylogenetic data, we invert the traditional interpretation of eukaryotic cell evolution. We propose that an ancestral prokaryotic cell, homologous to the modern-day nucleus, extruded membrane-bound blebs beyond its cell wall. These blebs functioned to facilitate material exchange with ectosymbiotic proto-mitochondria. The cytoplasm was then formed through the expansion of blebs around proto-mitochondria, with continuous spaces between the blebs giving rise to the endoplasmic reticulum, which later evolved into the eukaryotic secretory system. Further bleb-fusion steps yielded a continuous plasma membrane, which served to isolate the endoplasmic reticulum from the environment. CONCLUSIONS The inside-out theory is consistent with diverse kinds of data and provides an alternative framework by which to explore and understand the dynamic organization of modern eukaryotic cells. It also helps to explain a number of previously enigmatic features of cell biology, including the autonomy of nuclei in syncytia and the subcellular localization of protein N-glycosylation, and makes many predictions, including a novel mechanism of interphase nuclear pore insertion.
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Niklas KJ, Cobb ED, Crawford DR. The evo-devo of multinucleate cells, tissues, and organisms, and an alternative route to multicellularity. Evol Dev 2014; 15:466-74. [PMID: 24261447 DOI: 10.1111/ede.12055] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Multinucleate cells, tissues, or organisms occur in 60 families of land plants and in five otherwise diverse algal lineages (Rhodophyceae, Xanthophyceae, Chlorophyceae, Ulvophyceae, and Charophyceae). Inspection of a morphospace constructed out of eight developmental processes reveals a large number of possible variants of multinucleate cells and organisms that, with two exceptions, are represented by one or more plant species in one or more clades. Thus, most of these permutations of developmental processes exist in nature. Inspection of the morphospace also shows how the siphonous body plan (a multinucleate cell with the capacity for indeterminate growth in size) can theoretically serve as the direct progenitor of a multicellular organism by a process similar to segregative cell division observed in siphonocladean algae. Using molecular phylogenies of algal clades, different evolutionary scenarios are compared to see how the multicellular condition may have evolved from a multinucleate unicellular progenitor. We also show that the siphonous progenitor of a multicellular organism has previously passed through the alignment-of-fitness phase (in which genetic similarity among cells/nuclei minimizes internal genomic conflict) and the export-of-fitness phase (in which genetically similar cells/nuclei collaborate to achieve a reproductively integrated multicellular organism). All that is theoretically required is the evolutionary acquisition of the capacity to compartmentalize its cytoplasm.
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Affiliation(s)
- Karl J Niklas
- Department of Plant Biology, Cornell University, Ithaca, NY, 14853, USA
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Nick P. Eduard Strasburger--dead for a century, but still alive. PROTOPLASMA 2012; 249:857-858. [PMID: 22948832 DOI: 10.1007/s00709-012-0449-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
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Volkmann D, Baluška F, Menzel D. Eduard Strasburger (1844-1912): founder of modern plant cell biology. PROTOPLASMA 2012; 249:1163-1172. [PMID: 22543688 DOI: 10.1007/s00709-012-0406-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2012] [Accepted: 03/25/2012] [Indexed: 05/31/2023]
Abstract
Eduard Strasburger, director of the Botany Institute and the Botanical Garden at the University of Bonn from 1881 to 1912, was one of the most admirable scientists in the field of plant biology, not just as the founder of modern plant cell biology but in addition as an excellent teacher who strongly believed in "education through science." He contributed to plant cell biology by discovering the discrete stages of karyokinesis and cytokinesis in algae and higher plants, describing cytoplasmic streaming in different systems, and reporting on the growth of the pollen tube into the embryo sac and guidance of the tube by synergides. Strasburger raised many problems which are hot spots in recent plant cell biology, e.g., structure and function of the plasmodesmata in relation to phloem loading (Strasburger cells) and signaling, mechanisms of cell plate formation, vesicle trafficking as a basis for most important developmental processes, and signaling related to fertilization.
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Affiliation(s)
- Dieter Volkmann
- Institute of Cellular and Molecular Botany (IZMB), University of Bonn, Kirschallee 1, 53125, Bonn, Germany.
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