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Devkota L, Xiong J, Fischer AA, Murphy K, Kumar P, Balensiefen EL, Lindeman SV, Popescu CV, Fiedler AT. Observation of oxygenated intermediates in functional mimics of aminophenol dioxygenase. J Inorg Biochem 2024; 259:112632. [PMID: 38950482 DOI: 10.1016/j.jinorgbio.2024.112632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2024] [Revised: 05/31/2024] [Accepted: 06/01/2024] [Indexed: 07/03/2024]
Abstract
Aminophenol dioxygenases (APDO) are mononuclear nonheme iron enzymes that utilize dioxygen (O2) to catalyze the conversion of o-aminophenols to 2-picolinic acid derivatives in metabolic pathways. This study describes the synthesis and O2 reactivity of two synthetic models of substrate-bound APDO: [FeII(TpMe2)(tBu2APH)] (1) and [FeII(TpMe2)(tBuAPH)] (2), where TpMe2 = hydrotris(3,5-dimethylpyrazole-1-yl)borate, tBu2APH = 4,6-di-tert-butyl-2-aminophenolate, and tBuAPH2 = 4-tert-butyl-2-aminophenolate. Both Fe(II) complexes behave as functional APDO mimics, as exposure to O2 results in oxidative CC bond cleavage of the o-aminophenolate ligand. The ring-cleaved products undergo spontaneous cyclization to give substituted 2-picolinic acids, as verified by 1H NMR spectroscopy, mass spectrometry, and X-ray crystallography. Reaction of the APDO models with O2 at low temperature reveals multiple intermediates, which were probed with UV-vis absorption, electron paramagnetic resonance (EPR), Mössbauer (MB), and resonance Raman (rRaman) spectroscopies. The most stable intermediate at -70 °C in THF exhibits multiple isotopically-sensitive features in rRaman samples prepared with 16O2 and 18O2, confirming incorporation of O2-derived atom(s) into its molecular structure. Insights into the geometric structures, electronic properties, and spectroscopic features of the observed intermediates were obtained from density functional theory (DFT) calculations. Although functional APDO models have been previously reported, this is the first time that an oxygenated ligand-based radical has been detected and spectroscopically characterized in the ring-cleaving mechanism of a relevant synthetic system.
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Affiliation(s)
- Laxmi Devkota
- Department of Chemistry, Marquette University, 1414 W. Clybourn St., Milwaukee, WI 53233, United States
| | - Jin Xiong
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Anne A Fischer
- Department of Chemistry, Marquette University, 1414 W. Clybourn St., Milwaukee, WI 53233, United States
| | - Kate Murphy
- Department of Chemistry, The College of Arts and Sciences, University of St. Thomas, St. Paul, MN 55105, United States
| | - Praveen Kumar
- Department of Chemistry, Marquette University, 1414 W. Clybourn St., Milwaukee, WI 53233, United States
| | - Ellie L Balensiefen
- Department of Chemistry, Marquette University, 1414 W. Clybourn St., Milwaukee, WI 53233, United States
| | - Sergey V Lindeman
- Department of Chemistry, Marquette University, 1414 W. Clybourn St., Milwaukee, WI 53233, United States
| | - Codrina V Popescu
- Department of Chemistry, The College of Arts and Sciences, University of St. Thomas, St. Paul, MN 55105, United States.
| | - Adam T Fiedler
- Department of Chemistry, Marquette University, 1414 W. Clybourn St., Milwaukee, WI 53233, United States.
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Hota PK, Panda S, Phan H, Kim B, Siegler MA, Karlin KD. Dioxygenase Chemistry in Nucleophilic Aldehyde Deformylations Utilizing Dicopper O 2-Derived Peroxide Complexes. J Am Chem Soc 2024; 146:23854-23871. [PMID: 39141923 DOI: 10.1021/jacs.4c06243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/16/2024]
Abstract
The chemistry of copper-dioxygen complexes is relevant to copper enzymes in biology as well as in (ligand)Cu-O2 (or Cu2-O2) species utilized in oxidative transformations. For overall energy considerations, as applicable in chemical synthesis, it is beneficial to have an appropriate atom economy; both O-atoms of O2(g) are transferred to the product(s). However, examples of such dioxygenase-type chemistry are extremely rare or not well documented. Herein, we report on nucleophilic oxidative aldehyde deformylation reactivity by the peroxo-dicopper(II) species [Cu2II(BPMPO-)(O22-)]1+ {BPMPO-H = 2,6-bis{[(bis(2-pyridylmethyl)amino]methyl}-4-methylphenol)} and [Cu2II(XYLO-)(O22-)]1+ (XYLO- = a BPMPO- analogue possessing bis(2-{2-pyridyl}ethyl)amine chelating arms). Their dicopper(I) precursors are dioxygenase catalysts. The O2(g)-derived peroxo-dicopper(II) intermediates react rapidly with aldehydes like 2-phenylpropionaldehyde (2-PPA) and cyclohexanecarboxaldehyde (CCA) in 2-methyltetrahydrofuran at -90 °C. Warming to room temperature (RT) followed by workup results in good yields of formate (HC(O)O-) along with ketones (acetophenone or cyclohexanone). Mechanistic investigation shows that [Cu2II(BPMPO-)(O22-)]1+ species initially reacts reversibly with the aldehydes to form detectable dicopper(II) peroxyhemiacetal intermediates, for which optical titrations provide the Keq (at -90 °C) of 73.6 × 102 M-1 (2-PPA) and 10.4 × 102 M-1 (CCA). In the reaction of [Cu2II(XYLO-)(O22-)]1+ with 2-PPA, product complexes characterized by single-crystal X-ray crystallography are the anticipated dicopper(I) complex, [Cu2I(XYLO-)]1+ plus a mixed-valent Cu(I)Cu(II)-formate species. Formate was further identified and confirmed by 1H NMR spectroscopy and electrospray ionization mass spectrometry (ESI-MS) analysis. Using 18O2(g)-isotope labeling the reaction produced a high yield of 18-O incorporated acetophenone as well as formate. The overall results signify that true dioxygenase reactions have occurred, supported by a thorough mechanistic investigation.
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Affiliation(s)
- Pradip Kumar Hota
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Sanjib Panda
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Hai Phan
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Bohee Kim
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Maxime A Siegler
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Kenneth D Karlin
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
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3
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Ramakrishnan S, Anjukandi P. Superoxide to Peroxide Interconversion in Ni-TMC Complexes: The Significance of Structure and Spin States. Inorg Chem 2024; 63:15186-15196. [PMID: 39072391 DOI: 10.1021/acs.inorgchem.4c02568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/30/2024]
Abstract
A deeper comprehension of the characteristics of metal-superoxide and metal-peroxide chemical species is imperative, considering their pivotal functions in oxygen transport, enzymatic activation, and catalytic oxygenations. O2 activation is mediated by the interconversion of superoxide and peroxide species. Even though there are multiple studies on metal-superoxide and -peroxide intermediates, robust examples of their interconversion processes are scarce synthetically. For example, Ni-superoxide/peroxide complexes have been characterized with N-Tetramethylated Cyclam (TMC) ligands with different ring sizes, i.e., Nickel(II)-superoxide complex is characterized with 14-TMC while Nickel(III)-peroxide complex with 12-TMC. Later, both complexes were obtained with 13-TMC ligand by employing different bases; interestingly, no evidence of interconversion between them was identified. What are the factors influencing these processes and why is this preference? We attempt a computational analysis of this issue and provide arguments based on our conclusions. 2-dimensional potential energy scan is performed on the 12-TMC, 13-TMC, and 14-TMC systems to identify the reaction path connecting superoxide and peroxide species. Analyses indicate that structure and spin states play a significant role in determining the probability of interconversion. The superoxide-peroxide interconversion process appears to be bound by their propensity for distinct structural features and spin states.
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Affiliation(s)
- Shyama Ramakrishnan
- Department of Chemistry, Indian Institute of Technology, Kanjikode, Palakkad, Kerala 678623, India
| | - Padmesh Anjukandi
- Department of Chemistry, Indian Institute of Technology, Kanjikode, Palakkad, Kerala 678623, India
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4
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Beagan DM, Rivera C, Szymczak NK. Appended Lewis Acids Enable Dioxygen Reactivity and Catalytic Oxidations with Ni(II). J Am Chem Soc 2024; 146:12375-12385. [PMID: 38661576 PMCID: PMC11148854 DOI: 10.1021/jacs.3c12399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
We disclose a suite of Ni(II) complexes featuring secondary sphere Lewis acids of varied Lewis acidity and tether lengths. Several of these complexes feature atypical behavior of Ni(II): reactivity with O2 that occurs only in the presence of a tethered Lewis acid. In situ UV-vis spectroscopy revealed that, although adducts are stable at -40 °C, complexes containing 9-borabicyclo[3.3.1]nonane (9-BBN) Lewis acids underwent irreversible oxidative deborylation when warmed to room temperature. We computationally and experimentally identified that oxidative instability of appended 9-BBN moieties can be mitigated using weaker Lewis acids such as pinacolborane (BPin). These insights enabled the realization of catalytic reactions: hydrogen atom abstraction from phenols and room temperature oxygen atom transfer to PPh3.
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Affiliation(s)
- Daniel M Beagan
- University of Michigan, 930 N. University Ave., Ann Arbor, Michigan 48109, United States
| | - Carolina Rivera
- University of Michigan, 930 N. University Ave., Ann Arbor, Michigan 48109, United States
| | - Nathaniel K Szymczak
- University of Michigan, 930 N. University Ave., Ann Arbor, Michigan 48109, United States
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5
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Papanikolaou M, Hadjithoma S, Keramidas O, Drouza C, Amoiridis A, Themistokleous A, Hayes SC, Miras HN, Lianos P, Tsipis AC, Kabanos TA, Keramidas AD. Experimental and Theoretical Investigation of the Mechanism of the Reduction of O 2 from Air to O 22- by V IVO 2+- N, N, N-Amidate Compounds and Their Potential Use in Fuel Cells. Inorg Chem 2024; 63:3229-3249. [PMID: 38317481 PMCID: PMC10880062 DOI: 10.1021/acs.inorgchem.3c03272] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 01/08/2024] [Accepted: 01/09/2024] [Indexed: 02/07/2024]
Abstract
The two-electron reductive activation of O2 to O22- is of particular interest to the scientific community mainly due to the use of peroxides as green oxidants and in powerful fuel cells. Despite of the great importance of vanadium(IV) species to activate the two-electron reductive activation of O2, the mechanism is still unclear. Reaction of VIVO2+ species with the tridentate-planar N,N,N-carboxamide (ΗL) ligands in solution (CH3OH:H2O) under atmospheric O2, at room temperature, resulted in the quick formation of [VV(═O)(η2-O2)(κ3-L)(H2O)] and cis-[VV(═O)2(κ3-L)] compounds. Oxidation of the VIVO2+ complexes with the sterically hindered tridentate-planar N,N,N-carboxamide ligands by atmospheric O2 gave only cis-[VV(═O)2(κ3-L)] compounds. The mechanism of formation of [VV(═O)(η2-O2)(κ3-L)(H2O)] (I) and cis-[VV(═O)2(κ3-L)] (II) complexes vs time, from the interaction of [VIV(═O)(κ3-L)(Η2Ο)2]+ with atmospheric O2, was investigated with 51V, 1H NMR, UV-vis, cw-X-band EPR, and 18O2 labeling IR and resonance Raman spectroscopies revealing the formation of a stable intermediate (Id). EPR, MS, and theoretical calculations of the mechanism of the formation of I and II revealed a pathway, through a binuclear [VIV(═O)(κ3-L)(H2O)(η1,η1-O2)VIV(═O)(κ3-L)(H2O)]2+ intermediate. The results from cw-EPR, 1H NMR spectroscopies, cyclic voltammetry, and the reactivity of the complexes [VIV(═O)(κ3-L)(Η2Ο)2]+ toward O2 reduction fit better to an intermediate with a binuclear nature. Dynamic experiments in combination with computational calculations were undertaken to fully elucidate the mechanism of the O2 reduction to O22- by [VIV(═O)(κ3-L)(Η2Ο)2]+. The galvanic cell {Zn|VIII,VII||Id, [VIVO(κ3-L)(H2O)2]+|O2|C(s)} was manufactured, demonstrating the important applicability of this new chemistry to Zn|H2O2 fuel cells technology generating H2O2 in situ from the atmospheric O2.
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Affiliation(s)
| | - Sofia Hadjithoma
- Department
of Chemistry, University of Cyprus, Nicosia 2109, Cyprus
| | | | - Chryssoula Drouza
- Department
of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Limassol 3036, Cyprus
| | | | | | - Sofia C. Hayes
- Department
of Chemistry, University of Cyprus, Nicosia 2109, Cyprus
| | - Haralampos N. Miras
- School
of Chemistry, The University of Glasgow, Glasgow G12 8QQ, U.K.
- Department
of Chemical Engineering, University of Patras, 26500 Patras, Greece
| | - Panagiotis Lianos
- Department
of Chemical Engineering, University of Patras, 26500 Patras, Greece
| | - Athanassios C. Tsipis
- Section
of Inorganic and Analytical Chemistry, Department of Chemistry, University of Ioannina, 45110 Ioannina, Greece
| | - Themistoklis A. Kabanos
- Section
of Inorganic and Analytical Chemistry, Department of Chemistry, University of Ioannina, 45110 Ioannina, Greece
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6
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Zheng L, Cao M, Du Y, Liu Q, Emran MY, Kotb A, Sun M, Ma CB, Zhou M. Artificial enzyme innovations in electrochemical devices: advancing wearable and portable sensing technologies. NANOSCALE 2023; 16:44-60. [PMID: 38053393 DOI: 10.1039/d3nr05728c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
With the rapid evolution of sensing technologies, the integration of nanoscale catalysts, particularly those mimicking enzymatic functions, into electrochemical devices has surfaced as a pivotal advancement. These catalysts, dubbed artificial enzymes, embody a blend of heightened sensitivity, selectivity, and durability, laying the groundwork for innovative applications in real-time health monitoring and environmental detection. This minireview penetrates into the fundamental principles of electrochemical sensing, elucidating the unique attributes that establish artificial enzymes as foundational elements in this field. We spotlight a range of innovations where these catalysts have been proficiently incorporated into wearable and portable platforms. Navigating the pathway of amalgamating these nanoscale wonders into consumer-appealing devices presents a multitude of challenges; nevertheless, the progress made thus far signals a promising trajectory. As the intersection of materials science, biochemistry, and electronics progressively intensifies, a flourishing future seems imminent for artificial enzyme-infused electrochemical devices, with the potential to redefine the landscapes of wearable health diagnostics and portable sensing solutions.
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Affiliation(s)
- Long Zheng
- Key Laboratory of Polyoxometalate and Reticular Material Chemistry of Ministry of Education, Key Laboratory of Nanobiosensing and Nanobioanalysis at Universities of Jilin Province, Analysis and Testing Center, Department of Chemistry, Northeast Normal University, Changchun, Jilin Province 130024, China.
| | - Mengzhu Cao
- Key Laboratory of Polyoxometalate and Reticular Material Chemistry of Ministry of Education, Key Laboratory of Nanobiosensing and Nanobioanalysis at Universities of Jilin Province, Analysis and Testing Center, Department of Chemistry, Northeast Normal University, Changchun, Jilin Province 130024, China.
| | - Yan Du
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130000, China
| | - Quanyi Liu
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130000, China
| | - Mohammed Y Emran
- Chemistry Department, Faculty of Science, Al-Azhar University, Assiut 71524, Egypt
| | - Ahmed Kotb
- Chemistry Department, Faculty of Science, Al-Azhar University, Assiut 71524, Egypt
| | - Mimi Sun
- Key Laboratory of Polyoxometalate and Reticular Material Chemistry of Ministry of Education, Key Laboratory of Nanobiosensing and Nanobioanalysis at Universities of Jilin Province, Analysis and Testing Center, Department of Chemistry, Northeast Normal University, Changchun, Jilin Province 130024, China.
| | - Chong-Bo Ma
- Key Laboratory of Polyoxometalate and Reticular Material Chemistry of Ministry of Education, Key Laboratory of Nanobiosensing and Nanobioanalysis at Universities of Jilin Province, Analysis and Testing Center, Department of Chemistry, Northeast Normal University, Changchun, Jilin Province 130024, China.
| | - Ming Zhou
- Key Laboratory of Polyoxometalate and Reticular Material Chemistry of Ministry of Education, Key Laboratory of Nanobiosensing and Nanobioanalysis at Universities of Jilin Province, Analysis and Testing Center, Department of Chemistry, Northeast Normal University, Changchun, Jilin Province 130024, China.
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7
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Grotemeyer EN, Parham JD, Jackson TA. Reaction landscape of a mononuclear Mn III-hydroxo complex with hydrogen peroxide. Dalton Trans 2023; 52:14350-14370. [PMID: 37767937 DOI: 10.1039/d3dt02672h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/29/2023]
Abstract
Peroxomanganese species have been proposed as key intermediates in the catalytic cycles of both manganese enzymes and synthetic catalysts. However, many of these intermediates have yet to be observed. Here, we report the formation of a series of intermediates, each generated from the reaction of the mononuclear MnIII-hydroxo complex [MnIII(OH)(dpaq2Me)]+ with hydrogen peroxide under slightly different conditions. By changing the acidity of the reaction mixture and/or the quantity of hydrogen peroxide added, we are able to control which intermediate forms. Using a combination of electronic absorption, 1H NMR, EPR, and X-ray absorption spectroscopies, as well as density functional theory (DFT) and complete active space self-consistent field (CASSCF) calculations, we formulate these intermediates as the bis(μ-oxo)dimanganese(III,IV) complex [MnIIIMnIV(μ-O)2(dpaq2Me)2]+, the MnIII-hydroperoxo complex [MnIII(OOH)(dpaq2Me)]+, and the MnIII-peroxo complex [MnIII(O2)(dpaq2Me)]. The formation of the MnIII-hydroperoxo species from the reaction of a MnIII-hydroxo complex with hydrogen peroxide mimics an elementary reaction proposed for many synthetic manganese catalysts that activate hydrogen peroxide.
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Affiliation(s)
- Elizabeth N Grotemeyer
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Joshua D Parham
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Timothy A Jackson
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
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8
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Deolka S, Govindarajan R, Khaskin E, Vasylevskyi S, Bahri J, Fayzullin RR, Roy MC, Khusnutdinova JR. Oxygen transfer reactivity mediated by nickel perfluoroalkyl complexes using molecular oxygen as a terminal oxidant. Chem Sci 2023; 14:7026-7035. [PMID: 37389265 PMCID: PMC10306096 DOI: 10.1039/d3sc01861j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Accepted: 06/03/2023] [Indexed: 07/01/2023] Open
Abstract
Nickel perfluoroethyl and perfluoropropyl complexes supported by naphthyridine-type ligands show drastically different aerobic reactivity from their trifluoromethyl analogs resulting in facile oxygen transfer to perfluoroalkyl groups or oxygenation of external organic substrates (phosphines, sulfides, alkenes and alcohols) using O2 or air as a terminal oxidant. Such mild aerobic oxygenation occurs through the formation of spectroscopically detected transient high-valent NiIII and structurally characterized mixed-valent NiII-NiIV intermediates and radical intermediates, resembling O2 activation reported for some Pd dialkyl complexes. This reactivity is in contrast with the aerobic oxidation of naphthyridine-based Ni(CF3)2 complexes resulting in the formation of a stable NiIII product, which is attributed to the effect of greater steric congestion imposed by longer perfluoroalkyl chains.
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Affiliation(s)
- Shubham Deolka
- Coordination Chemistry and Catalysis Unit Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha Onna-son 904-0495 Okinawa Japan
| | - R Govindarajan
- Coordination Chemistry and Catalysis Unit Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha Onna-son 904-0495 Okinawa Japan
| | - Eugene Khaskin
- Coordination Chemistry and Catalysis Unit Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha Onna-son 904-0495 Okinawa Japan
| | - Serhii Vasylevskyi
- Coordination Chemistry and Catalysis Unit Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha Onna-son 904-0495 Okinawa Japan
| | - Janet Bahri
- Coordination Chemistry and Catalysis Unit Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha Onna-son 904-0495 Okinawa Japan
| | - Robert R Fayzullin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences 8 Arbuzov Street Kazan 420088 Russian Federation
| | - Michael C Roy
- Coordination Chemistry and Catalysis Unit Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha Onna-son 904-0495 Okinawa Japan
| | - Julia R Khusnutdinova
- Coordination Chemistry and Catalysis Unit Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha Onna-son 904-0495 Okinawa Japan
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Zhou B, Gabbaï FP. Four-Electron Reduction of O 2 Using Distibines in the Presence of ortho-Quinones. J Am Chem Soc 2023; 145:13758-13767. [PMID: 37306561 PMCID: PMC10863049 DOI: 10.1021/jacs.3c02223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Indexed: 06/13/2023]
Abstract
This study, which aims to identify atypical platforms for the reduction of dioxygen, describes the reaction of O2 with two distibines, namely, 4,5-bis(diphenylstibino)-2,7-di-tert-butyl-9,9-dimethylxanthene and 4,5-bis(diphenylstibino)-2,7-di-tert-butyl-9,9-dimethyldihydroacridine, in the presence of an ortho-quinone such as phenanthraquinone. The reaction proceeds by oxidation of the two antimony atoms to the + V state in concert with reductive cleavage of the O2 molecule. As confirmed by 18O labeling experiments, the two resulting oxo units combine with the ortho-quinone to form an α,α,β,β-tetraolate ligand that bridges the two antimony(V) centers. This process, which has been studied both experimentally and computationally, involves the formation of asymmetric, mixed-valent derivatives featuring a stibine as well as a catecholatostiborane formed by oxidative addition of the quinone to only one of the antimony centers. Under aerobic conditions, the catecholatostiborane moiety reacts with O2 to form a semiquinone/peroxoantimony intermediate, as supported by NMR spectroscopy in the case of the dimethyldihydroacridine derivative. These intermediates swiftly evolve into the symmetrical bis(antimony(V)) α,α,β,β-tetraolate complexes via low barrier processes. Finally, the controlled protonolysis and reduction of the bis(antimony(V)) α,α,β,β-tetraolate complex based on the 9,9-dimethylxanthene platform have been investigated and shown to regenerate the starting distibine and the ortho-quinone. More importantly, these last reactions also produce two equivalents of water as the product of O2 reduction.
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Affiliation(s)
- Benyu Zhou
- Texas A&M University, Department of Chemistry, College
Station, Texas 77843, United States
| | - François P. Gabbaï
- Texas A&M University, Department of Chemistry, College
Station, Texas 77843, United States
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10
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Jeong D, Selverstone Valentine J, Cho J. Bio-inspired mononuclear nonheme metal peroxo complexes: Synthesis, structures and mechanistic studies toward understanding enzymatic reactions. Coord Chem Rev 2023. [DOI: 10.1016/j.ccr.2023.215021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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11
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Khamespanah F, Patel NM, Forney AK, Heitger DR, Amarasekarage CM, Springer LE, Belecki K, Lucas HR. Flavonol dioxygenase chemistry mediated by a synthetic nickel superoxide. J Inorg Biochem 2023; 238:112021. [PMID: 36395718 DOI: 10.1016/j.jinorgbio.2022.112021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 10/01/2022] [Accepted: 10/02/2022] [Indexed: 11/16/2022]
Abstract
Nature exploits transition metal centers to enhance and tune the oxidizing power of natural oxidants such as O2 and H2O2. The design and interrogation of synthetic metallocomplexes with similar reactivity to metalloproteins provides one strategy for gaining insight into the mechanistic underpinnings of oxygen-activating enzymes such as oxidases, oxygenases, and dioxygenases like Ni-quercetinase (Ni-QueD). Ni-QueD catalyzes the oxidative ring opening of the polyphenol quercetin, a natural product with antioxidant properties. Herein, we report the synthesis and characterization of Ni(13-DOB), a Ni(II) species complexed by an N4-macrocycle that has been characterized by single crystal X-ray crystallography. Ni(13-DOB) forms a Ni-superoxide intermediate (Ni(13-DOB)O2•-) upon treatment with H2O2 and Et3N, as verified by resonance Raman spectroscopy. We demonstrate through UV/vis and LCMS that Ni(13-DOB)O2•- is capable of the 1-electron oxidation of flavonols, including both 3-hydroxyflavone (3-HF, the simplest flavonol) and quercetin itself. Incorporation of two O-atoms into the flavonol radical via superoxide from Ni(13-DOB)O2•- precedes oxidative cleavage of the flavonol scaffold in each case, consistent with quercetinase ring cleavage by Ni-QueD in Streptomyces sp. FLA. Conversion of 3-HF into 2-hydroxybenzoylbenzoic acid was accomplished with catalytic turnover of Ni(13-DOB) at ambient temperature, as confirmed by HPLC timecourses and GCMS analysis of isotopic labeling studies. The Ni(13-DOB)-mediated oxidative cleavage of quercetin to the corresponding biomimetic phenolic ester was also verified through 18O-isotopic labeling studies. Through the HPLC characterization of both on- and off-pathway products of flavonol dioxygenation by Ni(13-DOB)O2•-, the stringent reaction pathway control provided by enzyme active sites is highlighted.
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Affiliation(s)
- F Khamespanah
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America
| | - N M Patel
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America
| | - A K Forney
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America
| | - D R Heitger
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America
| | - C M Amarasekarage
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America
| | - L E Springer
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America
| | - K Belecki
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America.
| | - H R Lucas
- Department of Chemistry, Virginia Commonwealth University, Richmond, VA 23284, United States of America.
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12
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Guo B, Chou F, Huang L, Yin F, Fang J, Wang JB, Jia Z. Recent insights into oxidative metabolism of quercetin: catabolic profiles, degradation pathways, catalyzing metalloenzymes and molecular mechanisms. Crit Rev Food Sci Nutr 2022; 64:1312-1339. [PMID: 36037033 DOI: 10.1080/10408398.2022.2115456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Quercetin is the most abundant polyphenolic flavonoid (flavonol subclass) in vegetal foods and medicinal plants. This dietary chemopreventive agent has drawn significant interest for its multiple beneficial health effects ("polypharmacology") largely associated with the well-documented antioxidant properties. However, controversies exist in the literature due to its dual anti-/pro-oxidant character, poor stability/bioavailability but multifaceted bioactivities, leaving much confusion as to its exact roles in vivo. Increasing evidence indicates that a prior oxidation of quercetin to generate an array of chemical diverse products with redox-active/electrophilic moieties is emerging as a new linkage to its versatile actions. The present review aims to provide a comprehensive overview of the oxidative conversion of quercetin by systematically analyzing the current quercetin-related knowledge, with a particular focus on the complete spectrum of metabolite products, the enzymes involved in the catabolism and the underlying molecular mechanisms. Herein we review and compare the oxidation pathways, protein structures and catalytic patterns of the related metalloenzymes (phenol oxidases, heme enzymes and specially quercetinases), aiming for a deeper mechanistic understanding of the unusual biotransformation behaviors of quercetin and its seemingly controversial biological functions.
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Affiliation(s)
- Bin Guo
- Key Laboratory of Phytochemical R&D of Hunan Province, Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, China
| | - Fang Chou
- Key Laboratory of Phytochemical R&D of Hunan Province, Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, China
| | - Libin Huang
- Key Laboratory of Phytochemical R&D of Hunan Province, Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, China
| | - Feifan Yin
- Key Laboratory of Phytochemical R&D of Hunan Province, Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, China
| | - Jing Fang
- Key Laboratory of Phytochemical R&D of Hunan Province, Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, China
| | - Jian-Bo Wang
- Key Laboratory of Phytochemical R&D of Hunan Province, Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, China
| | - Zongchao Jia
- Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario, Canada
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13
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Liu J, Lorraine SC, Dolinar BS, Hoover JM. Aerobic Oxidation Reactivity of Well-Defined Cobalt(II) and Cobalt(III) Aminophenol Complexes. Inorg Chem 2022; 61:6008-6016. [PMID: 35414172 PMCID: PMC9328405 DOI: 10.1021/acs.inorgchem.1c03686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
This paper describes the synthesis and reactivity studies of three cobalt complexes bearing aminophenol-derived ligands without nitrogen substitution: CoII(tBu2APH)2(tBu2AP)2 (1), CoIII2(tBu2APH)2(tBu2AP)2(μ-tBu2BAP)2 (2), and CoIII(tBu2AP)3 (3), where tBu2APH = 2-amino-4,6-di-tert-butylphenol, tBu2AP = 2-amino-4,6-di-tert-butylphenolate, and μ-tBu2BAP = bridging 2-amido-4,6-di-tert-butylphenolate. Stoichiometric reactivity studies of these well-defined complexes demonstrate the catalytic competency of both cobalt(II) and cobalt(III) complexes in the aerobic oxidative cyclization of tBu2APH with tert-butylisonitrile. Reactions with O2 reveal the aerobic oxidation of the cobalt(II) complex 1 to generate the cobalt(III) species 2 and 3. UV-visible time-course studies and electron paramagnetic resonance spectroscopy indicate that this oxidation proceeds through a ligand-based radical intermediate. These studies represent the first example of well-defined cobalt aminophenol complexes that participate in catalytic aerobic oxidation reactions and highlight a key role for a ligand radical in the oxidation sequence.
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14
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Ghosh I, Chakraborty B, Bera A, Paul S, Paine TK. Selective oxygenation of C-H and CC bonds with H 2O 2 by high-spin cobalt(II)-carboxylate complexes. Dalton Trans 2022; 51:2480-2492. [PMID: 35050271 DOI: 10.1039/d1dt02235k] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Four cobalt(II)-carboxylate complexes [(6-Me3-TPA)CoII(benzoate)](BPh4) (1), [(6-Me3-TPA)CoII(benzilate)](ClO4) (2), [(6-Me3-TPA)CoII(mandelate)](BPh4) (3), and [(6-Me3-TPA)CoII(MPA)](BPh4) (4) (HMPA = 2-methoxy-2-phenylacetic acid) of the 6-Me3-TPA (tris((6-methylpyridin-2-yl)methyl)amine) ligand were isolated to investigate their ability in H2O2-dependent selective oxygenation of C-H and CC bonds. All six-coordinate complexes contain a high-spin cobalt(II) center. While the cobalt(II) complexes are inert toward dioxygen, each of these complexes reacts readily with hydrogen peroxide to form a diamagnetic cobalt(III) species, which decays with time leading to the oxidation of the methyl groups on the pyridine rings of the supporting ligand. Intramolecular ligand oxidation by the cobalt-based oxidant is partially inhibited in the presence of external substrates, and the substrates are converted to their corresponding oxidized products. Kinetic studies and labelling experiments indicate the involvement of a metal-based oxidant in affecting the chemo- and stereo-selective catalytic oxygenation of aliphatic C-H bonds and epoxidation of alkenes. An electrophilic cobalt-oxygen species that exhibits a kinetic isotope effect (KIE) value of 5.3 in toluene oxidation by 1 is proposed as the active oxidant. Among the complexes, the cobalt(II)-benzoate (1) and cobalt(II)-MPA (4) complexes display better catalytic activity compared to their α-hydroxy analogues (2 and 3). Catalytic studies with the cobalt(II)-acetonitrile complex [(6-Me3-TPA)CoII(CH3CN)2](ClO4)2 (5) in the presence and absence of externally added benzoate support the role of the carboxylate co-ligand in oxidation reactions. The proposed catalytic reaction involves a carboxylate-bridged dicobalt complex in the activation of H2O2 followed by the oxidation of substrates by a metal-based oxidant.
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Affiliation(s)
- Ivy Ghosh
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India.
| | - Biswarup Chakraborty
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India.
| | - Abhijit Bera
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India.
| | - Satadal Paul
- Department of Chemistry, Bangabasi Morning College, 19, Rajkumar Chakraborty Sarani, Kolkata - 700 009, India
| | - Tapan Kanti Paine
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India.
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15
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Paramagnetic resonance investigation of mono- and di-manganese-containing systems in biochemistry. Methods Enzymol 2022; 666:315-372. [DOI: 10.1016/bs.mie.2022.02.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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16
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Structure and function of aerotolerant, multiple-turnover THI4 thiazole synthases. Biochem J 2021; 478:3265-3279. [PMID: 34409984 PMCID: PMC8454699 DOI: 10.1042/bcj20210565] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 08/18/2021] [Accepted: 08/19/2021] [Indexed: 12/29/2022]
Abstract
Plant and fungal THI4 thiazole synthases produce the thiamin thiazole moiety in aerobic conditions via a single-turnover suicide reaction that uses an active-site Cys residue as sulfur donor. Multiple-turnover (i.e. catalytic) THI4s lacking an active-site Cys (non-Cys THI4s) that use sulfide as sulfur donor have been biochemically characterized —– but only from archaeal methanogens that are anaerobic, O2-sensitive hyperthermophiles from sulfide-rich habitats. These THI4s prefer iron as cofactor. A survey of prokaryote genomes uncovered non-Cys THI4s in aerobic mesophiles from sulfide-poor habitats, suggesting that multiple-turnover THI4 operation is possible in aerobic, mild, low-sulfide conditions. This was confirmed by testing 23 representative non-Cys THI4s for complementation of an Escherichia coli ΔthiG thiazole auxotroph in aerobic conditions. Sixteen were clearly active, and more so when intracellular sulfide level was raised by supplying Cys, demonstrating catalytic function in the presence of O2 at mild temperatures and indicating use of sulfide or a sulfide metabolite as sulfur donor. Comparative genomic evidence linked non-Cys THI4s with proteins from families that bind, transport, or metabolize cobalt or other heavy metals. The crystal structure of the aerotolerant bacterial Thermovibrio ammonificans THI4 was determined to probe the molecular basis of aerotolerance. The structure suggested no large deviations compared with the structures of THI4s from O2-sensitive methanogens, but is consistent with an alternative catalytic metal. Together with complementation data, use of cobalt rather than iron was supported. We conclude that catalytic THI4s can indeed operate aerobically and that the metal cofactor inserted is a likely natural determinant of aerotolerance.
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Itoh S, Shinke T, Itoh M, Wada T, Morimoto Y, Yanagisawa S, Sugimoto H, Kubo M. Revisiting Alkane Hydroxylation with m-CPBA (mChloroperbenzoic Acid) Catalyzed by Nickel(II) Complexes. Chemistry 2021; 27:14730-14737. [PMID: 34402568 DOI: 10.1002/chem.202102532] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Indexed: 11/09/2022]
Abstract
Mechanistic studies are performed on the alkane hydroxylation with m -CPBA ( m -chloroperbenzoic acid) catalyzed by nickel(II) complexes, Ni II (L). In the oxidation of cycloalkanes, Ni II (TPA) acts as an efficient catalyst with a high yield and a high alcohol selectivity. In the oxidation of adamantane, the tertiary carbon is predominantly oxidized. The reaction rate shows first-order dependence on [substrate] and [Ni II (L)] but is independent on [ m CPBA]; v obs = k 2 [substrate][ Ni II (L)]. The reaction exhibited a relatively large kinetic deuterium isotope effect ( KIE ) of 6.7, demonstrating that the hydrogen atom abstraction is involved in the rate-limiting step of the catalytic cycle. Furthermore, Ni II (L) supported by related tetradentate ligands exhibit apparently different catalytic activity, suggesting contribution of the Ni II (L) in the catalytic cycle. Based on the kinetic analysis and the significant effects of O 2 and CCl 4 on the product distribution pattern, possible contributions of (L)Ni II -O• and the acyloxyl radical as the reactive oxidants are discussed.
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Affiliation(s)
- Shinobu Itoh
- Osaka University, Graduate School of Engineering, 2-1 Yamadaoka, 565-0871, Suita, JAPAN
| | - Tomoya Shinke
- Osaka University School of Engineering Graduate School of Engineering: Osaka Daigaku Kogakubu Daigakuin Kogaku Kenkyuka, Applied Chemistry, JAPAN
| | - Mayu Itoh
- Osaka University School of Engineering Graduate School of Engineering: Osaka Daigaku Kogakubu Daigakuin Kogaku Kenkyuka, Applied Chemistry, JAPAN
| | - Takuma Wada
- Osaka University School of Engineering Graduate School of Engineering: Osaka Daigaku Kogakubu Daigakuin Kogaku Kenkyuka, Applied Chemistry, JAPAN
| | - Yuma Morimoto
- Osaka University School of Engineering Graduate School of Engineering: Osaka Daigaku Kogakubu Daigakuin Kogaku Kenkyuka, Applied Chemistry, JAPAN
| | | | - Hideki Sugimoto
- Osaka University School of Engineering Graduate School of Engineering: Osaka Daigaku Kogakubu Daigakuin Kogaku Kenkyuka, Applied Chemistry, JAPAN
| | - Minoru Kubo
- Graduate School of Science, Life Science, JAPAN
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18
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Das A, Chakraborty S, Mandal SK. Abnormal N-heterocyclic Carbene Based Ni(II) π-allyl Complex towards Molecular Oxygen Activation. Chem Asian J 2021; 16:2257-2260. [PMID: 34137185 DOI: 10.1002/asia.202100568] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 06/15/2021] [Indexed: 11/08/2022]
Abstract
Abnormal N-heterocyclic carbene (aNHC) based Ni(II) π-allyl complexes (3 and 4) were synthesized starting from a Ni(0) precursor. These complexes were characterized by NMR spectroscopy, single-crystal X-ray crystallography (4) and elemental analysis data. The underlying mechanism for the formation of Ni(II) η3 -allyl complexes from a Ni(0) precursor on treatment with a free abnormal N-heterocyclic carbene in absence of any external additive or oxidant was unraveled. Later, complex 3 was exposed to O2 gas under ambient pressure resulting in molecular oxygen activation to form a μ-hydroxo bridged Ni(II) dimer.
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Affiliation(s)
- Arpan Das
- Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, 741246, India
| | - Soumi Chakraborty
- Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, 741246, India
| | - Swadhin K Mandal
- Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, 741246, India
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19
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Chandra A, Ansari M, Monte‐Pérez I, Kundu S, Rajaraman G, Ray K. Ligand‐Constraint‐Induced Peroxide Activation for Electrophilic Reactivity. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202100438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Anirban Chandra
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
| | - Mursaleem Ansari
- Department of Chemistry Indian Institute of Technology Bombay, Powai Mumbai Maharashtra 400 076 India
| | - Inés Monte‐Pérez
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
| | - Subrata Kundu
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
| | - Gopalan Rajaraman
- Department of Chemistry Indian Institute of Technology Bombay, Powai Mumbai Maharashtra 400 076 India
| | - Kallol Ray
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
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20
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Chandra A, Ansari M, Monte-Pérez I, Kundu S, Rajaraman G, Ray K. Ligand-Constraint-Induced Peroxide Activation for Electrophilic Reactivity. Angew Chem Int Ed Engl 2021; 60:14954-14959. [PMID: 33843113 PMCID: PMC8252416 DOI: 10.1002/anie.202100438] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 03/26/2021] [Indexed: 12/16/2022]
Abstract
μ‐1,2‐peroxo‐bridged diiron(III) intermediates P are proposed as reactive intermediates in various biological oxidation reactions. In sMMO, P acts as an electrophile, and performs hydrogen atom and oxygen atom transfers to electron‐rich substrates. In cyanobacterial ADO, however, P is postulated to react by nucleophilic attack on electrophilic carbon atoms. In biomimetic studies, the ability of μ‐1,2‐peroxo‐bridged dimetal complexes of Fe, Co, Ni and Cu to act as nucleophiles that effect deformylation of aldehydes is documented. By performing reactivity and theoretical studies on an end‐on μ‐1,2‐peroxodicobalt(III) complex 1 involving a non‐heme ligand system, L1, supported on a Sn6O6 stannoxane core, we now show that a peroxo‐bridged dimetal complex can also be a reactive electrophile. The observed electrophilic chemistry, which is induced by the constraints provided by the Sn6O6 core, represents a new domain for metal−peroxide reactivity.
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Affiliation(s)
- Anirban Chandra
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Mursaleem Ansari
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, Maharashtra, 400 076, India
| | - Inés Monte-Pérez
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Subrata Kundu
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Gopalan Rajaraman
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, Maharashtra, 400 076, India
| | - Kallol Ray
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
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21
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Liang Y, Shi SH, Jin R, Qiu X, Wei J, Tan H, Jiang X, Shi X, Song S, Jiao N. Electrochemically induced nickel catalysis for oxygenation reactions with water. Nat Catal 2021. [DOI: 10.1038/s41929-020-00559-w] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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22
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Zhao N, Filatov AS, Xie J, Hill EA, Rogachev AY, Anderson JS. Generation and Reactivity of a Ni III2(μ-1,2-peroxo) Complex. J Am Chem Soc 2020; 142:21634-21639. [PMID: 33320644 DOI: 10.1021/jacs.0c10958] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
High-valent transition metal-oxo, -peroxo, and -superoxo complexes are crucial intermediates in both biological and synthetic oxidation of organic substrates, water oxidation, and oxygen reduction. While high-valent oxygenated complexes of Mn, Fe, Co, and Cu are increasingly well-known, high-valent oxygenated Ni complexes are comparatively rarer. Herein we report the isolation of such an unusual high-valent species in a thermally unstable NiIII2(μ-1,2-peroxo) complex, which has been characterized using single-crystal X-ray diffraction and X-ray absorption, NMR, and UV-vis spectroscopies. Reactivity studies show that this complex is stable toward dissociation of oxygen but reacts with simple nucleophiles and electrophiles.
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Affiliation(s)
- Norman Zhao
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - Alexander S Filatov
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - Jiaze Xie
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - Ethan A Hill
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - Andrey Yu Rogachev
- Department of Chemistry, Illinois Institute of Technology, Chicago, Illinois 60616, United States
| | - John S Anderson
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
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23
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A family of structural and functional models for the active site of a unique dioxygenase: Acireductone dioxygenase (ARD). J Inorg Biochem 2020; 212:111253. [PMID: 32949987 DOI: 10.1016/j.jinorgbio.2020.111253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2020] [Revised: 08/15/2020] [Accepted: 09/06/2020] [Indexed: 11/20/2022]
Abstract
We report the synthesis and biomimetic activity of a family of model complexes with relevance to acireductone dioxygenase (ARD), an enzyme that displays dual function based on metal identity found in the methionine salvage pathway (MSP). Three complexes with related structural motifs were synthesized and characterized derived from phenolate, and pyridine N4O Schiff-base ligands. They display pseudo-octahedral Ni(II)-N4O ligand coordination with water at the sixth site, in close alignment to the structure in the resting state of ARD. The three featured complexes exhibit carbon‑carbon bond cleavage activation of lithium acetylacetonate, which was used as a model enzyme substrate. Computationally derived mechanistic routes for the observed reactivity consistent with experimental conditions are herein proposed. The mechanism suggests the possibility of Ni(II)-substrate interactions, followed by oxygen insertion. These results constitute only the third functional model system of ARD, in an attempt to further advance biomimetic contributions to the ongoing debate of ARD's unique metal mediated, regioselective oxidative cleavage.
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Shin B, Park Y, Jeong D, Cho J. Nucleophilic reactivity of a mononuclear cobalt(iii)-bis(tert-butylperoxo) complex. Chem Commun (Camb) 2020; 56:9449-9452. [PMID: 32687135 DOI: 10.1039/d0cc03385e] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
A mononuclear cobalt(III)-bis(tert-butylperoxo) adduct (CoIII-(OOtBu)2) bearing a tetraazamacrocyclic ligand was synthesized and characterized using various physicochemical methods, such as X-ray, UV-vis, ESI-MS, EPR, and NMR analyses. The crystal structure of the CoIII-(OOtBu)2 complex clearly showed that two OOtBu ligands bound to the equatorial position of the cobalt(iii) center. Kinetic studies and product analyses indicate that the CoIII-(OOtBu)2 intermediate exhibits nucleophilic oxidative reactivity toward external organic substrates.
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Affiliation(s)
- Bongki Shin
- Department of Emerging Materials Science, DGIST, Daegu 42988, Korea.
| | - Younwoo Park
- Department of Emerging Materials Science, DGIST, Daegu 42988, Korea.
| | - Donghyun Jeong
- Department of Emerging Materials Science, DGIST, Daegu 42988, Korea.
| | - Jaeheung Cho
- Department of Emerging Materials Science, DGIST, Daegu 42988, Korea.
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25
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Brazeau SE, Pope F, Huang VL, Anklin C, Rheingold AL, Doerrer LH. Phosphine ligands as protecting groups for 3d complexes in oxidation by O2. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114609] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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26
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Wu YY, Hong JC, Tsai RF, Pan HR, Huang BH, Chiang YW, Lee GH, Cheng MJ, Hsu HF. Ligand-Based Reactivity of Oxygenation and Alkylation in Cobalt Complexes Binding with (Thiolato)phosphine Derivatives. Inorg Chem 2020; 59:4650-4660. [PMID: 32186861 DOI: 10.1021/acs.inorgchem.9b03740] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In our efforts to understand the nature of metal thiolates, we have explored the chemistry of cobalt ion supported by (thiolato)phosphine ligand derivatives. Herein, we synthesized and characterized a square-planar CoII complex binding with a bidentate (thiolato)phosphine ligand, Co(PS1″)2 (1) ([PS1″]- = [P(Ph)2(C6H3-3-SiMe3-2-S)]-). The complex activates O2 to form a ligand-based oxygenation product, Co(OPS1″)2 (2) ([OPS1″]- = [PO(Ph)2(C6H3-3-SiMe3-2-S)]-). In addition, an octahedral CoIII complex with a tridentate bis(thiolato)phosphine ligand, [NEt4][Co(PS2*)2] (3) ([PS2*]2- = [P(Ph)(C6H3-3-Ph-2-S)2]2-), was obtained. Compound 3 cleaves the C-Cl bond in dichloromethane via an S-based nucleophilic attack to generate a chloromethyl thioether group. Two isomeric products, [Co(PS2*)(PSSCH2Cl*)] (4 and 4') ([PSSCH2Cl*]- = [P(Ph)(C6H3-3-Ph-2-S)(C6H3-3-Ph-2-SCH2Cl)]-), were isolated and fully characterized. Both transformations, oxygenation of a CoII-bound phosphine donor in 1 and alkylation of a CoIII-bound thiolate in 3, were monitored by spectroscopic methods. These reaction products were isolated and fully characterized. Density functional theory (DFT, the B3LYP functional) calculations were performed to understand the electronic structure of 1 as well as the pathway of its transformation to 2.
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Affiliation(s)
- Yi-Ying Wu
- Department of Chemistry, National Cheng Kung University, Tainan 701, Taiwan
| | - Jia-Cheng Hong
- Department of Chemistry, National Cheng Kung University, Tainan 701, Taiwan
| | - Ruei-Fong Tsai
- Department of Chemistry and Frontier Research Center on Fundamental and Applied Sciences of Matters, National Tsing Hua University, Hsinchu 30013, Taiwan
| | - Hung-Ruei Pan
- Department of Chemistry, National Cheng Kung University, Tainan 701, Taiwan
| | - Bo-Hua Huang
- Department of Chemistry, National Cheng Kung University, Tainan 701, Taiwan
| | - Yun-Wei Chiang
- Department of Chemistry and Frontier Research Center on Fundamental and Applied Sciences of Matters, National Tsing Hua University, Hsinchu 30013, Taiwan
| | - Gene-Hsiang Lee
- Department of Chemistry, National Taiwan University, Taipei 106, Taiwan
| | - Mu-Jeng Cheng
- Department of Chemistry, National Cheng Kung University, Tainan 701, Taiwan
| | - Hua-Fen Hsu
- Department of Chemistry, National Cheng Kung University, Tainan 701, Taiwan
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27
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Tang FK, Yu ZH, Wong THF, Chung CYS, Hirao H, Au-Yeung HY. Fluorescein-Containing Superoxide Probes with a Modular Copper-Based Trigger. Chempluschem 2020; 85:653-658. [PMID: 32237224 DOI: 10.1002/cplu.202000059] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Revised: 03/13/2020] [Indexed: 12/22/2022]
Abstract
Fluorescein-derived superoxide probes featuring a copper(II) complex that can be activated by superoxide to initiate ether bond cleavage and uncage a fluorescein reporter for imaging in live cells are described. Compared to other superoxide sensing moieties, this bond cleavage strategy can be modularly adapted to fluorescent reporters with different properties without compromising the superoxide reactivity and selectivity. A green-emitting probe and its lysosome-targeting analogue have been successfully developed. Both probes are sensitive with more than 30-fold fluorescence enhancement towards superoxide and are highly selective with no significant response towards other reactive oxygen species. A structure-activity relationship study of the copper-based superoxide trigger showed that the secondary coordination environment of the copper(II) center is important for the superoxide reactivity and selectivity. The probes have been applied in imaging changes in intracellular superoxide level in live HeLa and HEK293T cells upon menadione stimulation and also in a cellular inflammation model in RAW 264.7 cells.
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Affiliation(s)
- Fung Kit Tang
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
| | - Zuo Hang Yu
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
| | - Thomas Hin-Fung Wong
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
| | - Clive Yik-Sham Chung
- Department of Chemistry, University of California, Berkeley, California, CA, 94720, USA
| | - Hajime Hirao
- Department of Chemistry, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, P. R. China
| | - Ho Yu Au-Yeung
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
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28
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Sacramento JJD, Goldberg DP. Oxidation of an indole substrate by porphyrin iron(iii) superoxide: relevance to indoleamine and tryptophan 2,3-dioxygenases. Chem Commun (Camb) 2020; 56:3089-3092. [PMID: 32052805 PMCID: PMC7065957 DOI: 10.1039/c9cc10019a] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Reaction of FeIII(O2˙-)(TPP) with 2,3-dimethylindole at -40 °C gives the ring-opened, dioxygenated N-(2-acetyl-phenyl)-acetamide product. The reaction was monitored in situ by low-temperature UV-vis and 1H NMR spectroscopies. This work demonstrates that a discrete iron(iii)(superoxo) porphyrin is competent to carry out indole oxidation, as proposed for the tryptophan and indoleamine 2,3-dioxygenases.
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Affiliation(s)
- Jireh Joy D Sacramento
- Department of Chemistry, The Johns Hopkins University, 3400 N. Charles Street, Baltimore, MD 21218, USA.
| | - David P Goldberg
- Department of Chemistry, The Johns Hopkins University, 3400 N. Charles Street, Baltimore, MD 21218, USA.
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29
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Fukuzumi S, Cho KB, Lee YM, Hong S, Nam W. Mechanistic dichotomies in redox reactions of mononuclear metal–oxygen intermediates. Chem Soc Rev 2020; 49:8988-9027. [DOI: 10.1039/d0cs01251c] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
This review article focuses on various mechanistic dichotomies in redox reactions of metal–oxygen intermediates with the emphasis on understanding and controlling their redox reactivity from experimental and theoretical points of view.
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Affiliation(s)
- Shunichi Fukuzumi
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- Graduate School of Science and Engineering
| | - Kyung-Bin Cho
- Department of Chemistry
- Jeonbuk National University
- Jeonju 54896
- Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
| | - Seungwoo Hong
- Department of Chemistry
- Sookmyung Women's University
- Seoul 04310
- Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- School of Chemistry and Chemical Engineering
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30
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Alkane and alkene oxidation reactions catalyzed by nickel(II) complexes: Effect of ligand factors. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2019.213085] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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31
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Sun Y, Liu Y, Zhang J, Li Y. Structure‐Reactivity Relationship in ES Models of Co(II)‐Containing Quercetin 2,4‐Dioxygenase. ChemistrySelect 2019. [DOI: 10.1002/slct.201903205] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Ying‐Ji Sun
- Department of ChemistryDalian University of Technology 2 Linggong Road Dalian 116024 China
| | - Yan‐Fang Liu
- Department of ChemistryDalian University of Technology 2 Linggong Road Dalian 116024 China
| | - Jian‐Jun Zhang
- Department of ChemistryDalian University of Technology 2 Linggong Road Dalian 116024 China
| | - Yan‐Qin Li
- Department of ChemistryDalian University of Technology 2 Linggong Road Dalian 116024 China
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32
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Gao Z, Li A, Li X, Liu X, Ma C, Yang J, Yang W, Li H. The adsorption and activation of oxygen molecule on nickel clusters doped graphene-based support by DFT. MOLECULAR CATALYSIS 2019. [DOI: 10.1016/j.mcat.2019.110547] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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33
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Parham JD, Wijeratne GB, Mayfield JR, Jackson TA. Steric control of dioxygen activation pathways for Mn II complexes supported by pentadentate, amide-containing ligands. Dalton Trans 2019; 48:13034-13045. [PMID: 31406966 PMCID: PMC6733413 DOI: 10.1039/c9dt02682g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Dioxygen activation at manganese centers is well known in nature, but synthetic manganese systems capable of utilizing O2 as an oxidant are relatively uncommon. These present investigations probe the dioxygen activation pathways of two mononuclear MnII complexes supported by pentacoordinate amide-containing ligands, [MnII(dpaq)](OTf) and the sterically modified [MnII(dpaq2Me)](OTf). Dioxygen titration experiments demonstrate that [MnII(dpaq)](OTf) reacts with O2 to form [MnIII(OH)(dpaq)](OTf) according to a 4 : 1 Mn : O2 stoichiometry. This stoichiometry is consistent with a pathway involving comproportionation between a MnIV-oxo species and residual MnII complex to form a (μ-oxo)dimanganese(iii,iii) species that is hydrolyzed by water to give the MnIII-hydroxo product. In contrast, the sterically modified [MnII(dpaq2Me)](OTf) complex was found to react with O2 according to a 2 : 1 Mn : O2 stoichiometry. This stoichiometry is indicative of a pathway in which a MnIV-oxo intermediate abstracts a hydrogen atom from solvent instead of undergoing comproportionation with the MnII starting complex. Isotopic labeling experiments, in which the oxygenation of the MnII complexes was carried out in deuterated solvent, supported this change in pathway. The oxygenation of [MnII(dpaq)](OTf) did not result in any deuterium incorporation in the MnIII-hydroxo product, while the oxygenation of [MnII(dpaq2Me)](OTf) in d3-MeCN showed [MnIII(OD)(dpaq2Me)]+ formation. Taken together, these observations highlight the use of steric effects as a means to select which intermediates form along dioxygen activation pathways.
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Affiliation(s)
- Joshua D Parham
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
| | - Gayan B Wijeratne
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
| | - Jaycee R Mayfield
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
| | - Timothy A Jackson
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
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34
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Kumar P, Lindeman SV, Fiedler AT. Cobalt Superoxo and Alkylperoxo Complexes Derived from Reaction of Ring-Cleaving Dioxygenase Models with O 2. J Am Chem Soc 2019; 141:10984-10987. [PMID: 31251607 DOI: 10.1021/jacs.9b05320] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The syntheses and O2 reactivities of active-site models of cobalt-substituted ring-cleaving dioxygenases are presented. The pentacoordinate cobalt(II)-aminophenolate complex, [Co(TpMe2)(tBu2APH)], gives rise to two distinct dioxygen adducts at reduced temperatures. The first is a paramagnetic (S = 1/2) cobalt(III)-superoxo species that was characterized with spectroscopic and computational techniques. The identity of the second Co/O2 adduct was elucidated by X-ray crystallography, which revealed an unprecedented cobalt(III)-alkylperoxo structure generated by O2 addition to the metal ion and ligand. These results provide synthetic precedents for proposed intermediates in the catalytic cycles of O2-activating cobalt enzymes.
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Affiliation(s)
- Praveen Kumar
- Department of Chemistry , Marquette University , 1414 W. Clybourn Street , Milwaukee , Wisconsin 53233 , United States
| | - Sergey V Lindeman
- Department of Chemistry , Marquette University , 1414 W. Clybourn Street , Milwaukee , Wisconsin 53233 , United States
| | - Adam T Fiedler
- Department of Chemistry , Marquette University , 1414 W. Clybourn Street , Milwaukee , Wisconsin 53233 , United States
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35
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Affiliation(s)
- Jan Honzíček
- Institute of Chemistry and Technology of Macromolecular Materials, Faculty of Chemical Technology, University of Pardubice, Studentská 573, 532 10 Pardubice, Czech Republic
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36
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Jana NC, Patra M, Brandão P, Panja A. Biomimetic catalytic activity and structural diversity of cobalt complexes with N3O-donor Schiff base ligand. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.03.017] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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37
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Wang P, Yap GP, Riordan CG. Synthesis, characterization and O2 reactivity of a bioinspired cobalt(II)-catecholate complex. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.01.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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38
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Noh H, Cho J. Synthesis, characterization and reactivity of non-heme 1st row transition metal-superoxo intermediates. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2018.12.006] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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39
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Cupric-superoxide complex that induces a catalytic aldol reaction-type C–C bond formation. Commun Chem 2019. [DOI: 10.1038/s42004-019-0115-6] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
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40
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Fukuzumi S, Lee YM, Nam W. Structure and reactivity of the first-row d-block metal-superoxo complexes. Dalton Trans 2019; 48:9469-9489. [DOI: 10.1039/c9dt01402k] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
This review discusses the structure and reactivity of metal-superoxo complexes covering all ten first-row d-block metals from Sc to Zn.
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Affiliation(s)
- Shunichi Fukuzumi
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- Graduate School of Science and Technology
| | - Yong-Min Lee
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- Research Institute for Basic Sciences
| | - Wonwoo Nam
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation
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41
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Adam SM, Wijeratne GB, Rogler PJ, Diaz DE, Quist DA, Liu JJ, Karlin KD. Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function. Chem Rev 2018; 118:10840-11022. [PMID: 30372042 PMCID: PMC6360144 DOI: 10.1021/acs.chemrev.8b00074] [Citation(s) in RCA: 145] [Impact Index Per Article: 24.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Heme-copper oxidases (HCOs) are terminal enzymes on the mitochondrial or bacterial respiratory electron transport chain, which utilize a unique heterobinuclear active site to catalyze the 4H+/4e- reduction of dioxygen to water. This process involves a proton-coupled electron transfer (PCET) from a tyrosine (phenolic) residue and additional redox events coupled to transmembrane proton pumping and ATP synthesis. Given that HCOs are large, complex, membrane-bound enzymes, bioinspired synthetic model chemistry is a promising approach to better understand heme-Cu-mediated dioxygen reduction, including the details of proton and electron movements. This review encompasses important aspects of heme-O2 and copper-O2 (bio)chemistries as they relate to the design and interpretation of small molecule model systems and provides perspectives from fundamental coordination chemistry, which can be applied to the understanding of HCO activity. We focus on recent advancements from studies of heme-Cu models, evaluating experimental and computational results, which highlight important fundamental structure-function relationships. Finally, we provide an outlook for future potential contributions from synthetic inorganic chemistry and discuss their implications with relevance to biological O2-reduction.
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Affiliation(s)
- Suzanne M. Adam
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Gayan B. Wijeratne
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Patrick J. Rogler
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Daniel E. Diaz
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - David A. Quist
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Jeffrey J. Liu
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Kenneth D. Karlin
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
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42
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Nishiura T, Chiba Y, Nakazawa J, Hikichi S. Tuning the O2 Binding Affinity of Cobalt(II) Centers by Changing the Structural and Electronic Properties of the Distal Substituents on Azole-Based Chelating Ligands. Inorg Chem 2018; 57:14218-14229. [DOI: 10.1021/acs.inorgchem.8b02241] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Toshiki Nishiura
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
| | - Yosuke Chiba
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
| | - Jun Nakazawa
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
| | - Shiro Hikichi
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
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43
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Murphy LJ, Ruddy AJ, McDonald R, Ferguson MJ, Turculet L. Activation of Molecular Hydrogen and Oxygen by PSiP Complexes of Cobalt. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800915] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Luke J. Murphy
- Department of Chemistry Dalhousie University 6274 Coburg Road P.O. Box 15000 Halifax Nova Scotia Canada, B3H 4R 2
| | - Adam J. Ruddy
- Department of Chemistry Dalhousie University 6274 Coburg Road P.O. Box 15000 Halifax Nova Scotia Canada, B3H 4R 2
| | - Robert McDonald
- X‐ray Crystallography Laboratory Department of Chemistry University of Alberta Edmonton Alberta CanadaT6G 2G2
| | - Michael J. Ferguson
- X‐ray Crystallography Laboratory Department of Chemistry University of Alberta Edmonton Alberta CanadaT6G 2G2
| | - Laura Turculet
- Department of Chemistry Dalhousie University 6274 Coburg Road P.O. Box 15000 Halifax Nova Scotia Canada, B3H 4R 2
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44
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Wang D, Ekanayake DM, Lindeman SV, Verani CN, Fiedler AT. Multielectron Redox Chemistry of Transition Metal Complexes Supported by a Non‐Innocent N
3
P
2
Ligand: Synthesis, Characterization, and Catalytic Properties. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Denan Wang
- Department of Chemistry Marquette University 53201 Milwaukee Wisconsin United States
| | - Danushka M. Ekanayake
- Department of Chemistry Wayne State University 5101 Cass Ave 48202 Detroit MI United States
| | - Sergey V. Lindeman
- Department of Chemistry Marquette University 53201 Milwaukee Wisconsin United States
| | - Cláudio N. Verani
- Department of Chemistry Wayne State University 5101 Cass Ave 48202 Detroit MI United States
| | - Adam T. Fiedler
- Department of Chemistry Marquette University 53201 Milwaukee Wisconsin United States
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45
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The sulfoxidation reaction catalyzed by CoBr 2 complexes, under the magnifying glass of green parameters. MOLECULAR CATALYSIS 2018. [DOI: 10.1016/j.mcat.2018.05.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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46
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Guengerich FP, Yoshimoto FK. Formation and Cleavage of C-C Bonds by Enzymatic Oxidation-Reduction Reactions. Chem Rev 2018; 118:6573-6655. [PMID: 29932643 DOI: 10.1021/acs.chemrev.8b00031] [Citation(s) in RCA: 154] [Impact Index Per Article: 25.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Many oxidation-reduction (redox) enzymes, particularly oxygenases, have roles in reactions that make and break C-C bonds. The list includes cytochrome P450 and other heme-based monooxygenases, heme-based dioxygenases, nonheme iron mono- and dioxygenases, flavoproteins, radical S-adenosylmethionine enzymes, copper enzymes, and peroxidases. Reactions involve steroids, intermediary metabolism, secondary natural products, drugs, and industrial and agricultural chemicals. Many C-C bonds are formed via either (i) coupling of diradicals or (ii) generation of unstable products that rearrange. C-C cleavage reactions involve several themes: (i) rearrangement of unstable oxidized products produced by the enzymes, (ii) oxidation and collapse of radicals or cations via rearrangement, (iii) oxygenation to yield products that are readily hydrolyzed by other enzymes, and (iv) activation of O2 in systems in which the binding of a substrate facilitates O2 activation. Many of the enzymes involve metals, but of these, iron is clearly predominant.
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Affiliation(s)
- F Peter Guengerich
- Department of Biochemistry , Vanderbilt University School of Medicine , Nashville , Tennessee 37232-0146 , United States.,Department of Chemistry , University of Texas-San Antonio , San Antonio , Texas 78249-0698 , United States
| | - Francis K Yoshimoto
- Department of Biochemistry , Vanderbilt University School of Medicine , Nashville , Tennessee 37232-0146 , United States.,Department of Chemistry , University of Texas-San Antonio , San Antonio , Texas 78249-0698 , United States
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47
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Joshi T, Kubeil M, Nsubuga A, Singh G, Gasser G, Stephan H. Harnessing the Coordination Chemistry of 1,4,7-Triazacyclononane for Biomimicry and Radiopharmaceutical Applications. Chempluschem 2018; 83:554-564. [DOI: 10.1002/cplu.201800103] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Indexed: 12/16/2022]
Affiliation(s)
- Tanmaya Joshi
- Institute of Radiopharmaceutical Cancer Research; Helmholtz-Zentrum Dresden-Rossendorf; Bautzner Landstrasse 400 01328 Dresden Germany
| | - Manja Kubeil
- Institute of Radiopharmaceutical Cancer Research; Helmholtz-Zentrum Dresden-Rossendorf; Bautzner Landstrasse 400 01328 Dresden Germany
| | - Anne Nsubuga
- Institute of Radiopharmaceutical Cancer Research; Helmholtz-Zentrum Dresden-Rossendorf; Bautzner Landstrasse 400 01328 Dresden Germany
| | - Garima Singh
- Institute of Radiopharmaceutical Cancer Research; Helmholtz-Zentrum Dresden-Rossendorf; Bautzner Landstrasse 400 01328 Dresden Germany
| | - Gilles Gasser
- Chimie ParisTech; PSL University; Laboratory for Inorganic Chemical Biology; 75005 Paris France
| | - Holger Stephan
- Institute of Radiopharmaceutical Cancer Research; Helmholtz-Zentrum Dresden-Rossendorf; Bautzner Landstrasse 400 01328 Dresden Germany
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48
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Luo D, Wang YA. Theoretical investigation of the superoxide anion free radical elimination by quercetin–metal complexes. Theor Chem Acc 2018. [DOI: 10.1007/s00214-018-2248-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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49
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Affiliation(s)
- Yujie Liang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Jialiang Wei
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Xu Qiu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Ning Jiao
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
- State Key Laboratory of Organometallic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
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50
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Duan PC, Manz DH, Dechert S, Demeshko S, Meyer F. Reductive O2 Binding at a Dihydride Complex Leading to Redox Interconvertible μ-1,2-Peroxo and μ-1,2-Superoxo Dinickel(II) Intermediates. J Am Chem Soc 2018; 140:4929-4939. [DOI: 10.1021/jacs.8b01468] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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